Pregenerated sensors for MSANTD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039693Ensembl transcript IDs: ENSMUST00000061135.8, ENSMUST00000064807.9, ENSMUST00000107704.2
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR TCA 90 bp | GAAGCCGCCTCTGCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCAAAGCTCCAGTCAGCTaGAAAACAAACAAAAGAACA | + |
Preference number: 2 (lower is better) Translates to: EAASAGDVVGWKASLGKVKAPVS*KTNKRT Trigger: TGTTCTTTTGTTTGTTTTTCAGCTGACTGGAGCTTT...GACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGCAGAGGCGGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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3UTR-3UTR TCA 90 bp | CAATTTGTGACCCACATGAGGAAACACCCCTCCAAAGGCTGGGCTCTTCAAACGAAAGCTCCAGTCAGCTaGAAAACAAACAAAAGAACA | + |
Preference number: 2 (lower is better) Translates to: QFVTHMRKHPSKGWALQTKAPVS*KTNKRT Trigger: TGTTCTTTTGTTTGTTTTTCAGCTGACTGGAGCTTT...CGTTTGAAGAGCCCAGCCTTTGGAGGGGTGTTTCCTCATGTGGGTCACAAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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3UTR-3UTR CAA 90 bp | GAAGCCGCCTCTGCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCGACTGTAACAGCTTCTaGGCCACCTCGGGGGTAGAC | + |
Preference number: 3 (lower is better) Translates to: EAASAGDVVGWKASLGKVDCNSF*ATSGVD Trigger: GTCTACCCCCGAGGTGGCCAAGAAGCTGTTACAGTC...GACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGCAGAGGCGGCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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3UTR CCA 72 bp | TGTATTGAAGCCGCCTCTGCTGGAGACGTGGTTGGTTaGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAAT | + |
Preference number: 3 (lower is better) Translates to: CIEAASAGDVVG*KASLGKVLKGN Trigger: ATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGCAGAGGCGGCTTCAATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | GAAGCCGCCTCTGCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCTGCGAGTTGTACTCGTaGGCCAAGGCCTGCCAGGTC | + |
Preference number: 4 (lower is better) Translates to: EAASAGDVVGWKASLGKVCELYS*AKACQV Trigger: GACCTGGCAGGCCTTGGCCCACGAGTACAACTCGCA...GACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGCAGAGGCGGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | ACCACTCTAATCCACCTAGACGCAGGTCTGTTGCGGGCTAGTGACCAAAAAGGCGCGGCCGCATCCTGGTaGTATTCGGGCTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: TTLIHLDAGLLRASDQKGAAASW*YSGSSS Trigger: GGAGGAGGAGCCCGAATACCACCAGGATGCGGCCGC...GCCTTTTTGGTCACTAGCCCGCAACAGACCTGCGTCTAGGTGGATTAGAGTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | ACCCCACACTCGCCTTGCCAACAGAGATTAACTACAAGGGAGCCATCCCCAAGTTGGGCGGCCGCATCCTaGTGGTATTCGGGCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: TPHSPCQQRLTTREPSPSWAAAS*WYSGSS Trigger: GGAGGAGCCCGAATACCACCAGGATGCGGCCGCCCA...ACTTGGGGATGGCTCCCTTGTAGTTAATCTCTGTTGGCAAGGCGAGTGTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | ACCACTCTAATCCACCTAGACGCAGGTCTGTTGCGGGCTAGTGACCAAAAAGGCTCGTGGGCCAAGGCCTaGCAGGTCCGCTGCTTGAGA | + |
Preference number: 4 (lower is better) Translates to: TTLIHLDAGLLRASDQKGSWAKA*QVRCLR Trigger: TCTCAAGCAGCGGACCTGGCAGGCCTTGGCCCACGA...GCCTTTTTGGTCACTAGCCCGCAACAGACCTGCGTCTAGGTGGATTAGAGTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | ACCCCACACTCGCCTTGCCAACAGAGATTAACTACAAGGGAGCCATCCCCAAGTAGCGACACGCTGGGCTaGGAGTTGTACTCGTGGGCC | + |
Preference number: 4 (lower is better) Translates to: TPHSPCQQRLTTREPSPSSDTLG*ELYSWA Trigger: GGCCCACGAGTACAACTCGCAGCCCAGCGTGTCGCT...ACTTGGGGATGGCTCCCTTGTAGTTAATCTCTGTTGGCAAGGCGAGTGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | TTTGTGACCCACATGAGGAAACACCCCTCCAAAGGCTGGGCTCTTCAAACGACCGCCTGCCAGGTCCGCTaGTTGAGAGCAATAGTCCGC | + |
Preference number: 4 (lower is better) Translates to: FVTHMRKHPSKGWALQTTACQVR*LRAIVR Trigger: GCGGACTATTGCTCTCAAGCAGCGGACCTGGCAGGC...GGTCGTTTGAAGAGCCCAGCCTTTGGAGGGGTGTTTCCTCATGTGGGTCACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | ACCACTCTAATCCACCTAGACGCAGGTCTGTTGCGGGCTAGTGACCAAAAAGGCGCCTGCCAGGTCCGCTaGTTGAGAGCAATAGTCCGC | + |
Preference number: 4 (lower is better) Translates to: TTLIHLDAGLLRASDQKGACQVR*LRAIVR Trigger: GCGGACTATTGCTCTCAAGCAGCGGACCTGGCAGGC...GCCTTTTTGGTCACTAGCCCGCAACAGACCTGCGTCTAGGTGGATTAGAGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | ACCCCACACTCGCCTTGCCAACAGAGATTAACTACAAGGGAGCCATCCCCAAGTTGCGAGTTGTACTCGTaGGCCAAGGCCTGCCAGGTC | + |
Preference number: 4 (lower is better) Translates to: TPHSPCQQRLTTREPSPSCELYS*AKACQV Trigger: GACCTGGCAGGCCTTGGCCCACGAGTACAACTCGCA...ACTTGGGGATGGCTCCCTTGTAGTTAATCTCTGTTGGCAAGGCGAGTGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | ACCACTCTAATCCACCTAGACGCAGGTCTGTTGCGGGCTAGTGACCAAAAAGGCGGGCTCCTCCTCCGGTaGGCTCTGAAGGAAGTACAG | + |
Preference number: 4 (lower is better) Translates to: TTLIHLDAGLLRASDQKGGLLLR*ALKEVQ Trigger: CTGTACTTCCTTCAGAGCCCACCGGAGGAGGAGCCC...GCCTTTTTGGTCACTAGCCCGCAACAGACCTGCGTCTAGGTGGATTAGAGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | GCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATGCGGCCGCATCCTGGTaGTATTCGGGCTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: AGDVVGWKASLGKVLKGNAAASW*YSGSSS Trigger: GGAGGAGGAGCCCGAATACCACCAGGATGCGGCCGC...ATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | GCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATTGGGCGGCCGCATCCTaGTGGTATTCGGGCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: AGDVVGWKASLGKVLKGNWAAAS*WYSGSS Trigger: GGAGGAGCCCGAATACCACCAGGATGCGGCCGCCCA...ATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | ACCACTCTAATCCACCTAGACGCAGGTCTGTTGCGGGCTAGTGACCAAAAAGGCACAGCAAAGGACTCTTaGGCGGCCGCATCCTGGTGG | + |
Preference number: 4 (lower is better) Translates to: TTLIHLDAGLLRASDQKGTAKDS*AAASWW Trigger: CCACCAGGATGCGGCCGCCCAAGAGTCCTTTGCTGT...GCCTTTTTGGTCACTAGCCCGCAACAGACCTGCGTCTAGGTGGATTAGAGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR TCA 90 bp | ACCACTCTAATCCACCTAGACGCAGGTCTGTTGCGGGCTAGTGACCAAAAAGGCCCGGCAGCATGCTGCTaGTCTTCTCCTTGTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: TTLIHLDAGLLRASDQKGPAACC*SSPCPG Trigger: TCCTGGACAAGGAGAAGATCAGCAGCATGCTGCCGG...GCCTTTTTGGTCACTAGCCCGCAACAGACCTGCGTCTAGGTGGATTAGAGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR TCA 90 bp | ACCCCACACTCGCCTTGCCAACAGAGATTAACTACAAGGGAGCCATCCCCAAGTCCGGCAGCATGCTGCTaGTCTTCTCCTTGTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: TPHSPCQQRLTTREPSPSPAACC*SSPCPG Trigger: TCCTGGACAAGGAGAAGATCAGCAGCATGCTGCCGG...ACTTGGGGATGGCTCCCTTGTAGTTAATCTCTGTTGGCAAGGCGAGTGTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR TCA 90 bp | TTTGTGACCCACATGAGGAAACACCCCTCCAAAGGCTGGGCTCTTCAAACGACCCCGGCAGCATGCTGCTaGTCTTCTCCTTGTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: FVTHMRKHPSKGWALQTTPAACC*SSPCPG Trigger: TCCTGGACAAGGAGAAGATCAGCAGCATGCTGCCGG...GGTCGTTTGAAGAGCCCAGCCTTTGGAGGGGTGTTTCCTCATGTGGGTCACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR TCA 90 bp | ACCACTCTAATCCACCTAGACGCAGGTCTGTTGCGGGCTAGTGACCAAAAAGGCTCCTCCGGTGGGCTCTaGAGGAAGTACAGTTGCTCC | + |
Preference number: 4 (lower is better) Translates to: TTLIHLDAGLLRASDQKGSSGGL*RKYSCS Trigger: GGAGCAACTGTACTTCCTTCAGAGCCCACCGGAGGA...GCCTTTTTGGTCACTAGCCCGCAACAGACCTGCGTCTAGGTGGATTAGAGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | AGGCAATTTGTGACCCACATGAGGAAACACCCCTCCAAAGGCTGGGCTCTTCAAGCCTGCCAGGTCCGCTaGTTGAGAGCAATAGTCCGC | + |
Preference number: 4 (lower is better) Translates to: RQFVTHMRKHPSKGWALQACQVR*LRAIVR Trigger: GCGGACTATTGCTCTCAAGCAGCGGACCTGGCAGGC...TTGAAGAGCCCAGCCTTTGGAGGGGTGTTTCCTCATGTGGGTCACAAATTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | GCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATTCGTGGGCCAAGGCCTaGCAGGTCCGCTGCTTGAGA | + |
Preference number: 4 (lower is better) Translates to: AGDVVGWKASLGKVLKGNSWAKA*QVRCLR Trigger: TCTCAAGCAGCGGACCTGGCAGGCCTTGGCCCACGA...ATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | GCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATAGCGACACGCTGGGCTaGGAGTTGTACTCGTGGGCC | + |
Preference number: 4 (lower is better) Translates to: AGDVVGWKASLGKVLKGNSDTLG*ELYSWA Trigger: GGCCCACGAGTACAACTCGCAGCCCAGCGTGTCGCT...ATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | GCAATTTGTGACCCACATGAGGAAACACCCCTCCAAAGGCTGGGCTCTTCAAACTGCGAGTTGTACTCGTaGGCCAAGGCCTGCCAGGTC | + |
Preference number: 4 (lower is better) Translates to: AICDPHEETPLQRLGSSNCELYS*AKACQV Trigger: GACCTGGCAGGCCTTGGCCCACGAGTACAACTCGCA...GTTTGAAGAGCCCAGCCTTTGGAGGGGTGTTTCCTCATGTGGGTCACAAATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | AGGCAATTTGTGACCCACATGAGGAAACACCCCTCCAAAGGCTGGGCTCTTCAAGGGCTCCTCCTCCGGTaGGCTCTGAAGGAAGTACAG | + |
Preference number: 4 (lower is better) Translates to: RQFVTHMRKHPSKGWALQGLLLR*ALKEVQ Trigger: CTGTACTTCCTTCAGAGCCCACCGGAGGAGGAGCCC...TTGAAGAGCCCAGCCTTTGGAGGGGTGTTTCCTCATGTGGGTCACAAATTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | AGGCAATTTGTGACCCACATGAGGAAACACCCCTCCAAAGGCTGGGCTCTTCAAACAGCAAAGGACTCTTaGGCGGCCGCATCCTGGTGG | + |
Preference number: 4 (lower is better) Translates to: RQFVTHMRKHPSKGWALQTAKDS*AAASWW Trigger: CCACCAGGATGCGGCCGCCCAAGAGTCCTTTGCTGT...TTGAAGAGCCCAGCCTTTGGAGGGGTGTTTCCTCATGTGGGTCACAAATTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR TCA 90 bp | AGGCAATTTGTGACCCACATGAGGAAACACCCCTCCAAAGGCTGGGCTCTTCAATCCTCCGGTGGGCTCTaGAGGAAGTACAGTTGCTCC | + |
Preference number: 4 (lower is better) Translates to: RQFVTHMRKHPSKGWALQSSGGL*RKYSCS Trigger: GGAGCAACTGTACTTCCTTCAGAGCCCACCGGAGGA...TTGAAGAGCCCAGCCTTTGGAGGGGTGTTTCCTCATGTGGGTCACAAATTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | TTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATTTGTGACCCACATGAGGGCGGCCGCATCCTGGTaGTATTCGGGCTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: LESLSGESLKRQFVTHMRAAASW*YSGSSS Trigger: GGAGGAGGAGCCCGAATACCACCAGGATGCGGCCGC...CCTCATGTGGGTCACAAATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CCA 90 bp | GCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATACAGCAAAGGACTCTTaGGCGGCCGCATCCTGGTGG | + |
Preference number: 4 (lower is better) Translates to: AGDVVGWKASLGKVLKGNTAKDS*AAASWW Trigger: CCACCAGGATGCGGCCGCCCAAGAGTCCTTTGCTGT...ATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | TTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATTTGTGACCCACATGAGGAGCGACACGCTGGGCTaGGAGTTGTACTCGTGGGCC | + |
Preference number: 4 (lower is better) Translates to: LESLSGESLKRQFVTHMRSDTLG*ELYSWA Trigger: GGCCCACGAGTACAACTCGCAGCCCAGCGTGTCGCT...CCTCATGTGGGTCACAAATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | ACCCCACACTCGCCTTGCCAACAGAGATTAACTACAAGGGAGCCATCCCCAAGTTGGTGCTCCTCCTCGTaGATTTTCTTTAAAGCACCT | + |
Preference number: 4 (lower is better) Translates to: TPHSPCQQRLTTREPSPSWCSSS*IFFKAP Trigger: AGGTGCTTTAAAGAAAATGCACGAGGAGGAGCACCA...ACTTGGGGATGGCTCCCTTGTAGTTAATCTCTGTTGGCAAGGCGAGTGTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | ACCACTCTAATCCACCTAGACGCAGGTCTGTTGCGGGCTAGTGACCAAAAAGGCTCCTTGGTAAAAGTCTaGAGTTTCCTCTCCCAGTAC | + |
Preference number: 4 (lower is better) Translates to: TTLIHLDAGLLRASDQKGSLVKV*SFLSQY Trigger: GTACTGGGAGAGGAAACTGCAGACTTTTACCAAGGA...GCCTTTTTGGTCACTAGCCCGCAACAGACCTGCGTCTAGGTGGATTAGAGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | CAATTTGTGACCCACATGAGGAAACACCCCTCCAAAGGCTGGGCTCTTCAAACGTGGTGCTCCTCCTCGTaGATTTTCTTTAAAGCACCT | + |
Preference number: 4 (lower is better) Translates to: QFVTHMRKHPSKGWALQTWCSSS*IFFKAP Trigger: AGGTGCTTTAAAGAAAATGCACGAGGAGGAGCACCA...CGTTTGAAGAGCCCAGCCTTTGGAGGGGTGTTTCCTCATGTGGGTCACAAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | CAATTTGTGACCCACATGAGGAAACACCCCTCCAAAGGCTGGGCTCTTCAAACGTCCTTGGTAAAAGTCTaGAGTTTCCTCTCCCAGTAC | + |
Preference number: 4 (lower is better) Translates to: QFVTHMRKHPSKGWALQTSLVKV*SFLSQY Trigger: GTACTGGGAGAGGAAACTGCAGACTTTTACCAAGGA...CGTTTGAAGAGCCCAGCCTTTGGAGGGGTGTTTCCTCATGTGGGTCACAAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | GCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATTGGTGCTCCTCCTCGTaGATTTTCTTTAAAGCACCT | + |
Preference number: 4 (lower is better) Translates to: AGDVVGWKASLGKVLKGNWCSSS*IFFKAP Trigger: AGGTGCTTTAAAGAAAATGCACGAGGAGGAGCACCA...ATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR GCA 90 bp | GCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATTCCTTGGTAAAAGTCTaGAGTTTCCTCTCCCAGTAC | + |
Preference number: 4 (lower is better) Translates to: AGDVVGWKASLGKVLKGNSLVKV*SFLSQY Trigger: GTACTGGGAGAGGAAACTGCAGACTTTTACCAAGGA...ATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS GCA 90 bp | CGCAGCGACACGCTGGGCTGCGAGTTGTACTCGTGGGCCAAGGCCTaGCAGGTCCGCTGCTTGAGAGCAATAGTCCGCGCGTCGCTCTTC | + |
Preference number: 5 (lower is better) Translates to: RSDTLGCELYSWAKA*QVRCLRAIVRASLF Trigger: GAAGAGCGACGCGCGGACTATTGCTCTCAAGCAGCGGACCTGGCAGGCCTTGGCCCACGAGTACAACTCGCAGCCCAGCGTGTCGCTGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS CCA 90 bp | TGTTTGAAGTCCCGCAGCGACACGCTGGGCTGCGAGTTGTACTCGTaGGCCAAGGCCTGCCAGGTCCGCTGCTTGAGAGCAATAGTCCGC | + |
Preference number: 5 (lower is better) Translates to: CLKSRSDTLGCELYS*AKACQVRCLRAIVR Trigger: GCGGACTATTGCTCTCAAGCAGCGGACCTGGCAGGCCTTGGCCCACGAGTACAACTCGCAGCCCAGCGTGTCGCTGCGGGACTTCAAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS GCA 90 bp | CTGGGCTGCGAGTTGTACTCGTGGGCCAAGGCCTGCCAGGTCCGCTaGTTGAGAGCAATAGTCCGCGCGTCGCTCTTCTTGCATTCCAAC | + |
Preference number: 5 (lower is better) Translates to: LGCELYSWAKACQVR*LRAIVRASLFLHSN Trigger: GTTGGAATGCAAGAAGAGCGACGCGCGGACTATTGCTCTCAAGCAGCGGACCTGGCAGGCCTTGGCCCACGAGTACAACTCGCAGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | ACCCCACACTCGCCTTGCCAACAGAGATTAACTACAAGGGAGCCATCCCCAAGTACGCTGGGCTGCGAGTaGTACTCGTGGGCCAAGGCC | + |
Preference number: 5 (lower is better) Translates to: TPHSPCQQRLTTREPSPSTLGCE*YSWAKA Trigger: GGCCTTGGCCCACGAGTACAACTCGCAGCCCAGCGT...ACTTGGGGATGGCTCCCTTGTAGTTAATCTCTGTTGGCAAGGCGAGTGTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | ACCACTCTAATCCACCTAGACGCAGGTCTGTTGCGGGCTAGTGACCAAAAAGGCACGCTGGGCTGCGAGTaGTACTCGTGGGCCAAGGCC | + |
Preference number: 5 (lower is better) Translates to: TTLIHLDAGLLRASDQKGTLGCE*YSWAKA Trigger: GGCCTTGGCCCACGAGTACAACTCGCAGCCCAGCGT...GCCTTTTTGGTCACTAGCCCGCAACAGACCTGCGTCTAGGTGGATTAGAGTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | GAAGCCGCCTCTGCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCCACTTCTTGAGCTGTTaGAAGTCCCGCAGCGACACG | + |
Preference number: 5 (lower is better) Translates to: EAASAGDVVGWKASLGKVHFLSC*KSRSDT Trigger: CGTGTCGCTGCGGGACTTCAAACAGCTCAAGAAGTG...GACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGCAGAGGCGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | ACCCCACACTCGCCTTGCCAACAGAGATTAACTACAAGGGAGCCATCCCCAAGTCTGCTGATCTTCTCCTaGTCCAGGACGTGGCTGCTC | + |
Preference number: 5 (lower is better) Translates to: TPHSPCQQRLTTREPSPSLLIFS*SRTWLL Trigger: GAGCAGCCACGTCCTGGACAAGGAGAAGATCAGCAG...ACTTGGGGATGGCTCCCTTGTAGTTAATCTCTGTTGGCAAGGCGAGTGTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | ACCACTCTAATCCACCTAGACGCAGGTCTGTTGCGGGCTAGTGACCAAAAAGGCCACTTCTTGAGCTGTTaGAAGTCCCGCAGCGACACG | + |
Preference number: 5 (lower is better) Translates to: TTLIHLDAGLLRASDQKGHFLSC*KSRSDT Trigger: CGTGTCGCTGCGGGACTTCAAACAGCTCAAGAAGTG...GCCTTTTTGGTCACTAGCCCGCAACAGACCTGCGTCTAGGTGGATTAGAGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | GCAATTTGTGACCCACATGAGGAAACACCCCTCCAAAGGCTGGGCTCTTCAAACCTGCTGATCTTCTCCTaGTCCAGGACGTGGCTGCTC | + |
Preference number: 5 (lower is better) Translates to: AICDPHEETPLQRLGSSNLLIFS*SRTWLL Trigger: GAGCAGCCACGTCCTGGACAAGGAGAAGATCAGCAG...GTTTGAAGAGCCCAGCCTTTGGAGGGGTGTTTCCTCATGTGGGTCACAAATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | GCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATCTGCTGATCTTCTCCTaGTCCAGGACGTGGCTGCTC | + |
Preference number: 5 (lower is better) Translates to: AGDVVGWKASLGKVLKGNLLIFS*SRTWLL Trigger: GAGCAGCCACGTCCTGGACAAGGAGAAGATCAGCAG...ATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | ACCACTCTAATCCACCTAGACGCAGGTCTGTTGCGGGCTAGTGACCAAAAAGGCTTGAGGACTTCCATTTaGATCCGGTGCTCCTCCTCG | + |
Preference number: 5 (lower is better) Translates to: TTLIHLDAGLLRASDQKGLRTSI*IRCSSS Trigger: CGAGGAGGAGCACCGGATCAAAATGGAAGTCCTCAA...GCCTTTTTGGTCACTAGCCCGCAACAGACCTGCGTCTAGGTGGATTAGAGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | TTTGTGACCCACATGAGGAAACACCCCTCCAAAGGCTGGGCTCTTCAAACGACCTTGAGGACTTCCATTTaGATCCGGTGCTCCTCCTCG | + |
Preference number: 5 (lower is better) Translates to: FVTHMRKHPSKGWALQTTLRTSI*IRCSSS Trigger: CGAGGAGGAGCACCGGATCAAAATGGAAGTCCTCAA...GGTCGTTTGAAGAGCCCAGCCTTTGGAGGGGTGTTTCCTCATGTGGGTCACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS CCA 90 bp | TGGCCACGTGCACCTCGTTCATTTGGATCAGCTGCAGCTGTAAGATaGACATCTGCTGATGGTGCTCCTCCTCGTGCATTTTCTTTAAAG | + |
Preference number: 5 (lower is better) Translates to: WPRAPRSFGSAAAVR*TSADGAPPRAFSLK Trigger: CTTTAAAGAAAATGCACGAGGAGGAGCACCATCAGCAGATGTCCATCTTACAGCTGCAGCTGATCCAAATGAACGAGGTGCACGTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | ACCACTCTAATCCACCTAGACGCAGGTCTGTTGCGGGCTAGTGACCAAAAAGGCAGCTCCGAGAAGTACTaGGCAGGTTTAATGATTTCG | + |
Preference number: 5 (lower is better) Translates to: TTLIHLDAGLLRASDQKGSSEKY*AGLMIS Trigger: CGAAATCATTAAACCTGCCAAGTACTTCTCGGAGCT...GCCTTTTTGGTCACTAGCCCGCAACAGACCTGCGTCTAGGTGGATTAGAGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | TTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATTTGTGACCCACATGAGGCACTTCTTGAGCTGTTaGAAGTCCCGCAGCGACACG | + |
Preference number: 5 (lower is better) Translates to: LESLSGESLKRQFVTHMRHFLSC*KSRSDT Trigger: CGTGTCGCTGCGGGACTTCAAACAGCTCAAGAAGTG...CCTCATGTGGGTCACAAATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | TTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATTTGTGACCCACATGAGGTTGAGGACTTCCATTTaGATCCGGTGCTCCTCCTCG | + |
Preference number: 5 (lower is better) Translates to: LESLSGESLKRQFVTHMRLRTSI*IRCSSS Trigger: CGAGGAGGAGCACCGGATCAAAATGGAAGTCCTCAA...CCTCATGTGGGTCACAAATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | GCTGGAGACGTGGTTGGTTGGAAAGCCTCTCTGGGGAAAGTCTTAAAAGGCAATAGCTCCGAGAAGTACTaGGCAGGTTTAATGATTTCG | + |
Preference number: 5 (lower is better) Translates to: AGDVVGWKASLGKVLKGNSSEKY*AGLMIS Trigger: CGAAATCATTAAACCTGCCAAGTACTTCTCGGAGCT...ATTGCCTTTTAAGACTTTCCCCAGAGAGGCTTTCCAACCAACCACGTCTCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS-3UTR CAA 90 bp | CCACTAAAAGATAAAGTCAAAATCACCAGCCACACTCCTTTATCTTGCATTTCTAGCTCCGAGAAGTACTaGGCAGGTTTAATGATTTCG | + |
Preference number: 5 (lower is better) Translates to: PLKDKVKITSHTPLSCISSSEKY*AGLMIS Trigger: CGAAATCATTAAACCTGCCAAGTACTTCTCGGAGCT...AGAAATGCAAGATAAAGGAGTGTGGCTGGTGATTTTGACTTTATCTTTTAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061135.8 ENSMUST00000107704.2 |
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CDS CCA 72 bp | TCCCGCAGCGACACGCTGGGCTGCGAGTTGTACTCGTaGGCCAAGGCCTGCCAGGTCCGCTGCTTGAGAGCA | + |
Preference number: 6 (lower is better) Translates to: SRSDTLGCELYS*AKACQVRCLRA Trigger: TGCTCTCAAGCAGCGGACCTGGCAGGCCTTGGCCCACGAGTACAACTCGCAGCCCAGCGTGTCGCTGCGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS GCA 72 bp | ACGCTGGGCTGCGAGTTGTACTCGTGGGCCAAGGCCTaGCAGGTCCGCTGCTTGAGAGCAATAGTCCGCGCG | + |
Preference number: 6 (lower is better) Translates to: TLGCELYSWAKA*QVRCLRAIVRA Trigger: CGCGCGGACTATTGCTCTCAAGCAGCGGACCTGGCAGGCCTTGGCCCACGAGTACAACTCGCAGCCCAGCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS GCA 72 bp | GAGTTGTACTCGTGGGCCAAGGCCTGCCAGGTCCGCTaGTTGAGAGCAATAGTCCGCGCGTCGCTCTTCTTG | + |
Preference number: 6 (lower is better) Translates to: ELYSWAKACQVR*LRAIVRASLFL Trigger: CAAGAAGAGCGACGCGCGGACTATTGCTCTCAAGCAGCGGACCTGGCAGGCCTTGGCCCACGAGTACAACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS CAA 90 bp | GGCTGCGAGTTGTACTCGTGGGCCAAGGCCTGCCAGGTCCGCTGCTaGAGAGCAATAGTCCGCGCGTCGCTCTTCTTGCATTCCAACACA | + |
Preference number: 6 (lower is better) Translates to: GCELYSWAKACQVRC*RAIVRASLFLHSNT Trigger: TGTGTTGGAATGCAAGAAGAGCGACGCGCGGACTATTGCTCTCAAGCAGCGGACCTGGCAGGCCTTGGCCCACGAGTACAACTCGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS CAA 72 bp | TTGTACTCGTGGGCCAAGGCCTGCCAGGTCCGCTGCTaGAGAGCAATAGTCCGCGCGTCGCTCTTCTTGCAT | + |
Preference number: 6 (lower is better) Translates to: LYSWAKACQVRC*RAIVRASLFLH Trigger: ATGCAAGAAGAGCGACGCGCGGACTATTGCTCTCAAGCAGCGGACCTGGCAGGCCTTGGCCCACGAGTACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS GCA 72 bp | ATCTTCTTTTTATTGAGGACTTCCATTTTGATCCGGTaGTCCTCCTCGGCCATCTCGCACTCGCGCTCGATC | + |
Preference number: 6 (lower is better) Translates to: IFFLLRTSILIR*SSSAISHSRSI Trigger: GATCGAGCGCGAGTGCGAGATGGCCGAGGAGGAGCACCGGATCAAAATGGAAGTCCTCAATAAAAAGAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS CAA 90 bp | AGAGCAATAGTCCGCGCGTCGCTCTTCTTGCATTCCAACACATACTaGTACTTCTCTACCAAGGCAAGCAAGATGCTCTTCTCCAGCTCC | + |
Preference number: 6 (lower is better) Translates to: RAIVRASLFLHSNTY*YFSTKASKMLFSSS Trigger: GGAGCTGGAGAAGAGCATCTTGCTTGCCTTGGTAGAGAAGTACAAGTATGTGTTGGAATGCAAGAAGAGCGACGCGCGGACTATTGCTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS CAA 72 bp | GTCCGCGCGTCGCTCTTCTTGCATTCCAACACATACTaGTACTTCTCTACCAAGGCAAGCAAGATGCTCTTC | + |
Preference number: 6 (lower is better) Translates to: VRASLFLHSNTY*YFSTKASKMLF Trigger: GAAGAGCATCTTGCTTGCCTTGGTAGAGAAGTACAAGTATGTGTTGGAATGCAAGAAGAGCGACGCGCGGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS CAA 72 bp | TCCCAGTACATCTTCTTTTTATTGAGGACTTCCATTTaGATCCGGTGCTCCTCCTCGGCCATCTCGCACTCG | + |
Preference number: 6 (lower is better) Translates to: SQYIFFLLRTSI*IRCSSSAISHS Trigger: CGAGTGCGAGATGGCCGAGGAGGAGCACCGGATCAAAATGGAAGTCCTCAATAAAAAGAAGATGTACTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |
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CDS GCA 72 bp | ACACATACTTGTACTTCTCTACCAAGGCAAGCAAGATaGTCTTCTCCAGCTCCGAGAAGTACTTGGCAGGTT | + |
Preference number: 6 (lower is better) Translates to: THTCTSLPRQAR*SSPAPRSTWQV Trigger: AACCTGCCAAGTACTTCTCGGAGCTGGAGAAGAGCATCTTGCTTGCCTTGGTAGAGAAGTACAAGTATGTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061135.8 ENSMUST00000064807.9 ENSMUST00000107704.2 |