Pregenerated sensors for MSANTD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042138Ensembl transcript IDs: ENSMUST00000048604.8, ENSMUST00000209391.2, ENSMUST00000211060.2, ENSMUST00000214298.2, ENSMUST00000239459.2, ENSMUST00000239463.2
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTGCCCATTCTTACAGCAAAGCCAGACAAATCCCCACAAACAGTaGAGCCACACTCCGCTACAAAAGGCTCAACTAGCACACCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: VCPFLQQSQTNPHKQ*SHTPLQKAQLAHPR Trigger: TCTTGGGTGTGCTAGTTGAGCCTTTTGTAGCGGAGTGTGGCTGCACTGTTTGTGGGGATTTGTCTGGCTTTGCTGTAAGAATGGGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGATGAGCCACATACAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACAAATCCGACGGCAGCATCTaGACGTGGGGTAGTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LDEPHTACLPILTAKPDKSDGSI*TWGSLG Trigger: ACCCAGACTACCCCACGTCCAGATGCTGCCGTCGGA...TTTGTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTGTATGTGGCTCATCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAATCCGACGGCAGCATCTaGACGTGGGGTAGTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKSDGSI*TWGSLG Trigger: ACCCAGACTACCCCACGTCCAGATGCTGCCGTCGGA...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACAAATCCCCACAAACAGTGCGAGGTCTGCTTTTCCTaGCCAGAGTCTATGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: QPVCPFLQQSQTNPHKQCEVCFS*PESMIS Trigger: AGAAATCATAGACTCTGGGCAGGAAAAGCAGACCTC...GCACTGTTTGTGGGGATTTGTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| 3UTR-3UTR GCA 90 bp | GTACTATCTTCATTGTTAATATATATAGAAAAGAGTGCATTTGCGGGGCTTGGGAATCCCCACAAACAGTaGAGCCACACTCCGCTACAA | + |
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Preference number: 2 (lower is better) Translates to: VLSSLLIYIEKSAFAGLGNPHKQ*SHTPLQ Trigger: TTGTAGCGGAGTGTGGCTGCACTGTTTGTGGGGATT...CCCAAGCCCCGCAAATGCACTCTTTTCTATATATATTAACAATGAAGATAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| 3UTR-3UTR TCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAAATGAGCATTTCAGGTaGGGTCTGCTTTTCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GTSHKQKSLQATLIGNSKNEHFR*GLLFLP Trigger: GGGCAGGAAAAGCAGACCTCACCTGAAATGCTCATT...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| 3UTR-3UTR GCA 90 bp | GTACTATCTTCATTGTTAATATATATAGAAAAGAGTGCATTTGCGGGGCTTGGGCACATACAGCCTGTCTaGCCATTCTTACAGCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: VLSSLLIYIEKSAFAGLGHIQPV*PFLQQS Trigger: GCTTTGCTGTAAGAATGGGCAGACAGGCTGTATGTG...CCCAAGCCCCGCAAATGCACTCTTTTCTATATATATTAACAATGAAGATAGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| 3UTR-3UTR TCA 90 bp | GTACTATCTTCATTGTTAATATATATAGAAAAGAGTGCATTTGCGGGGCTTGGGTCTTGTACATCTAGATaGGCCACATACAGCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: VLSSLLIYIEKSAFAGLGSCTSR*ATYSLS Trigger: AGACAGGCTGTATGTGGCTCATCTAGATGTACAAGA...CCCAAGCCCCGCAAATGCACTCTTTTCTATATATATTAACAATGAAGATAGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| 3UTR-3UTR GCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAACCACCATGCAAGACCTaGTTGCTCAAAATGAGCATT | + |
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Preference number: 2 (lower is better) Translates to: GTSHKQKSLQATLIGNSKPPCKT*LLKMSI Trigger: AATGCTCATTTTGAGCAAGCAGGTCTTGCATGGTGG...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| 3UTR-3UTR TCA 90 bp | GTACTATCTTCATTGTTAATATATATAGAAAAGAGTGCATTTGCGGGGCTTGGGCAGCTGTATTTACTGTaGCTTGATTTACTCGCCATT | + |
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Preference number: 2 (lower is better) Translates to: VLSSLLIYIEKSAFAGLGQLYLL*LDLLAI Trigger: AATGGCGAGTAAATCAAGTCACAGTAAATACAGCTG...CCCAAGCCCCGCAAATGCACTCTTTTCTATATATATTAACAATGAAGATAGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| 3UTR-3UTR TCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAACAGCTGTATTTACTGTaGCTTGATTTACTCGCCATT | + |
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Preference number: 2 (lower is better) Translates to: GTSHKQKSLQATLIGNSKQLYLL*LDLLAI Trigger: AATGGCGAGTAAATCAAGTCACAGTAAATACAGCTG...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| 3UTR GCA 72 bp | TTCTTACAGCAAAGCCAGACAAATCCCCACAAACAGTaGAGCCACACTCCGCTACAAAAGGCTCAACTAGCA | + |
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Preference number: 3 (lower is better) Translates to: FLQQSQTNPHKQ*SHTPLQKAQLA Trigger: TGCTAGTTGAGCCTTTTGTAGCGGAGTGTGGCTGCACTGTTTGTGGGGATTTGTCTGGCTTTGCTGTAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| 3UTR-3UTR CAA 90 bp | CATCTAGATGAGCCACATACAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACTTCTTAGAGGTTGTATaGGTCTCATCGTGGAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: HLDEPHTACLPILTAKPDFLEVV*VSSWKK Trigger: CTTTTTCCACGATGAGACCAATACAACCTCTAAGAA...GTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTGTATGTGGCTCATCTAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| 3UTR-3UTR CAA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAACCATGCAAGACCTGCTaGCTCAAAATGAGCATTTCA | + |
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Preference number: 3 (lower is better) Translates to: GTSHKQKSLQATLIGNSKPCKTC*LKMSIS Trigger: TGAAATGCTCATTTTGAGCAAGCAGGTCTTGCATGG...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| 3UTR TCA 72 bp | CTTTTACTACTTAGCAGACTTACCTCAATTAGTAAGTaGAAAACATGGAGAATCAAAGTGCCTTCATACCAC | + |
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Preference number: 3 (lower is better) Translates to: LLLLSRLTSISK*KTWRIKVPSYH Trigger: GTGGTATGAAGGCACTTTGATTCTCCATGTTTTTCACTTACTAATTGAGGTAAGTCTGCTAAGTAGTAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| CDS-3UTR CCA 90 bp | GCACCGGTGAGGCCACAGCTGGAGCACAGCATTCAGGTCTGGGCATCGAACCAGACACGCGCTCGTACATaGCCGGCCCAGGGGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: APVRPQLEHSIQVWASNQTRART*PAQGPC Trigger: GCAAGGCCCCTGGGCCGGCCATGTACGAGCGCGTGT...CTGGTTCGATGCCCAGACCTGAATGCTGTGCTCCAGCTGTGGCCTCACCGGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209391.2 |
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| CDS-3UTR GCA 90 bp | CTATTCAGCACCGGTGAGGCCACAGCTGGAGCACAGCATTCAGGTCTGGGCATCGCCCAGGGGCCTTGCTaGCGAATACCGTGCCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LFSTGEATAGAQHSGLGIAQGPC*RIPCRL Trigger: GAGCCGGCACGGTATTCGGCAGCAAGGCCCCTGGGC...GATGCCCAGACCTGAATGCTGTGCTCCAGCTGTGGCCTCACCGGTGCTGAATAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209391.2 |
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| CDS-3UTR GCA 90 bp | GTGAGGCCACAGCTGGAGCACAGCATTCAGGTCTGGGCATCGAACCAGCTGTCTGAGCGCGTTCGTCTCTaGCGGCGTCCACGACATACC | + |
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Preference number: 4 (lower is better) Translates to: VRPQLEHSIQVWASNQLSERVRL*RRPRHT Trigger: GGTATGTCGTGGACGCCGGCAGAGACGAACGCGCTC...AGACAGCTGGTTCGATGCCCAGACCTGAATGCTGTGCTCCAGCTGTGGCCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209391.2 |
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| CDS-3UTR GCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAGCCCAGGGGCCTTGCTaGCGAATACCGTGCCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQAQGPC*RIPCRL Trigger: GAGCCGGCACGGTATTCGGCAGCAAGGCCCCTGGGC...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR GCA 90 bp | GGCCACAGCTGGAGCACAGCATTCAGGTCTGGGCATCGAACCAGCTGTCTGAAATGCTGCCGAATACCGTaGCGGCTCCCTCCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GHSWSTAFRSGHRTSCLKCCRIP*RLPPAA Trigger: AGCAGCTGGAGGGAGCCGGCACGGTATTCGGCAGCA...TTTCAGACAGCTGGTTCGATGCCCAGACCTGAATGCTGTGCTCCAGCTGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209391.2 |
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| CDS-3UTR CCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAAGGCTCCCCGAGGCGTaGAAGGGTCGGACAGCGATG | + |
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Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQRLPEA*KGRTAM Trigger: CATCGCTGTCCGACCCTTCCACGCCTCGGGGAGCCT...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR GCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAGAGCGCGTTCGTCTCTaGCGGCGTCCACGACATACC | + |
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Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQERVRL*RRPRHT Trigger: GGTATGTCGTGGACGCCGGCAGAGACGAACGCGCTC...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR GCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAATGCTGCCGAATACCGTaGCGGCTCCCTCCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQCCRIP*RLPPAA Trigger: AGCAGCTGGAGGGAGCCGGCACGGTATTCGGCAGCA...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CCA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTACACGCGCTCGTACATaGCCGGCCCAGGGGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GVVWVMGRRDKTAQAQILTRART*PAQGPC Trigger: GCAAGGCCCCTGGGCCGGCCATGTACGAGCGCGTGT...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAACCTGGGTCCAGAGCATaGCGCTCCACATCTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQPGSRA*RSTSGE Trigger: CTCACCAGATGTGGAGCGCCATGCTCTGGACCCAGG...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR TCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAACCATCTTCGGAATTTTaGGCGGCGAGTTGGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQPSSEF*AASWRA Trigger: TGCCCGCCAACTCGCCGCTCAAAATTCCGAAGATGG...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR GCA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTGAGCGCGTTCGTCTCTaGCGGCGTCCACGACATACC | + |
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Preference number: 4 (lower is better) Translates to: GVVWVMGRRDKTAQAQILERVRL*RRPRHT Trigger: GGTATGTCGTGGACGCCGGCAGAGACGAACGCGCTC...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAAACATTGCCCCCGGTTaGCTTCGAGTGGGCAATGGG | + |
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Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQNIAPG*LRVGNG Trigger: CCCATTGCCCACTCGAAGCCAACCGGGGGCAATGTT...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR TCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAACGAGGTAGCAGTAGATaGTCCGGGTGGGTTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQRGSSR*SGWVPL Trigger: AAGTGGAACCCACCCGGATCATCTACTGCTACCTCG...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAACCGGTTGGCTTCGAGTaGGCAATGGGTATCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQPVGFE*AMGIQS Trigger: TGACTGGATACCCATTGCCCACTCGAAGCCAACCGG...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR TCA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTCCATCTTCGGAATTTTaGGCGGCGAGTTGGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GVVWVMGRRDKTAQAQILPSSEF*AASWRA Trigger: TGCCCGCCAACTCGCCGCTCAAAATTCCGAAGATGG...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR TCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAATCCCCAGTCCTCCTGTaGATAGTCCTCCATAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQSPVLL*IVLHSA Trigger: AGCACTATGGAGGACTATTCACAGGAGGACTGGGGA...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CCA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTAACATTGCCCCCGGTTaGCTTCGAGTGGGCAATGGG | + |
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Preference number: 4 (lower is better) Translates to: GVVWVMGRRDKTAQAQILNIAPG*LRVGNG Trigger: CCCATTGCCCACTCGAAGCCAACCGGGGGCAATGTT...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR TCA 90 bp | CATCTAGATGAGCCACATACAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACCCATCTTCGGAATTTTaGGCGGCGAGTTGGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: HLDEPHTACLPILTAKPDPSSEF*AASWRA Trigger: TGCCCGCCAACTCGCCGCTCAAAATTCCGAAGATGG...GTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTGTATGTGGCTCATCTAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| CDS-3UTR CCA 90 bp | CAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACAAATCCCCACAAACAGTGCCCGGTTGGCTTCGAGTaGGCAATGGGTATCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: QPVCPFLQQSQTNPHKQCPVGFE*AMGIQS Trigger: TGACTGGATACCCATTGCCCACTCGAAGCCAACCGG...GCACTGTTTGTGGGGATTTGTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| CDS-3UTR TCA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTTCCCCAGTCCTCCTGTaGATAGTCCTCCATAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GVVWVMGRRDKTAQAQILSPVLL*IVLHSA Trigger: AGCACTATGGAGGACTATTCACAGGAGGACTGGGGA...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR TCA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGTGCACCGCCCGGAAGTaGCGCACCCCTGCATCCGGC | + |
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Preference number: 4 (lower is better) Translates to: KQKSLQATLIGNSKTLGRCTARK*RTPASG Trigger: GCCGGATGCAGGGGTGCGTCACTTCCGGGCGGTGCA...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000239459.2 |
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| CDS-3UTR GCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAGGTATCTCGCTTCTGTaGCTCTTCAGAAGACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQGISLL*LFRRLL Trigger: CAAGAGTCTTCTGAAGAGGCACAGAAGCGAGATACC...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR TCA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTCAGGCTTCTCAGAGTTaGAATACTCGCGAAGACGCT | + |
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Preference number: 4 (lower is better) Translates to: GVVWVMGRRDKTAQAQILQASQS*NTREDA Trigger: AGCGTCTTCGCGAGTATTTCAACTCTGAGAAGCCTG...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR TCA 90 bp | GGTGAGGCCACAGCTGGAGCACAGCATTCAGGTCTGGGCATCGAACCAGCTGTCCTCATAACTGGACAATaGAGCATTCCAACTAGATAT | + |
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Preference number: 4 (lower is better) Translates to: GEATAGAQHSGLGIEPAVLITGQ*SIPTRY Trigger: ATATCTAGTTGGAATGCTTCATTGTCCAGTTATGAG...GACAGCTGGTTCGATGCCCAGACCTGAATGCTGTGCTCCAGCTGTGGCCTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209391.2 |
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| CDS-3UTR CCA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAAAGGGTCGGACAGCGATaGGTTCCCGTCGCTCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKRVGQR*VPVAQV Trigger: GACCTGAGCGACGGGAACCCATCGCTGTCCGACCCT...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CCA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGACACGCGCTCGTACATaGCCGGCCCAGGGGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQKSLQATLIGNSKTLGRTRART*PAQGPC Trigger: GCAAGGCCCCTGGGCCGGCCATGTACGAGCGCGTGT...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACAAATCCCCACAAACAGTGCCCTGGCAATAAATACTaGACAACATTGCCCCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QPVCPFLQQSQTNPHKQCPGNKY*TTLPPV Trigger: AACCGGGGGCAATGTTGTTCAGTATTTATTGCCAGG...GCACTGTTTGTGGGGATTTGTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTCCTGGCAATAAATACTaGACAACATTGCCCCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GVVWVMGRRDKTAQAQILPGNKY*TTLPPV Trigger: AACCGGGGGCAATGTTGTTCAGTATTTATTGCCAGG...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAACAACCCACTCTTTACTaGAGGTTTTGGCATTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQQPTLY*RFWHLL Trigger: AAGCAAATGCCAAAACCTTCAGTAAAGAGTGGGTTG...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAACTACTTCTACAAATTTaGTGTAGATGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQLLLQI*CRWTWG Trigger: CCCCCAAGTCCATCTACATCAAATTTGTAGAAGTAG...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTAATACTGAACAACATTaGCCCCGGTTGGCTTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVVWVMGRRDKTAQAQILNTEQH*PRLASS Trigger: ACTCGAAGCCAACCGGGGGCAATGTTGTTCAGTATT...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACAAATCCCCACAAACAGTGCAATACTGAACAACATTaGCCCCGGTTGGCTTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPVCPFLQQSQTNPHKQCNTEQH*PRLASS Trigger: ACTCGAAGCCAACCGGGGGCAATGTTGTTCAGTATT...GCACTGTTTGTGGGGATTTGTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGAGGCTCCCCGAGGCGTaGAAGGGTCGGACAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: KQKSLQATLIGNSKTLGRRLPEA*KGRTAM Trigger: CATCGCTGTCCGACCCTTCCACGCCTCGGGGAGCCT...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAGTACAATATTCTGCATaGTATCTCGCTTCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQVQYSA*YLASVP Trigger: AGGCACAGAAGCGAGATACCATGCAGAATATTGTAC...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAACCTGGGTCCAGAGCATaGCGCTCCACATCTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKPGSRA*RSTSGE Trigger: CTCACCAGATGTGGAGCGCCATGCTCTGGACCCAGG...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | CTAGATGAGCCACATACAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACAAACAGGCTTCTCAGAGTTaGAATACTCGCGAAGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDEPHTACLPILTAKPDKQASQS*NTREDA Trigger: AGCGTCTTCGCGAGTATTTCAACTCTGAGAAGCCTG...TTTGTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTGTATGTGGCTCATCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGAGGGTCGGACAGCGATaGGTTCCCGTCGCTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQKSLQATLIGNSKTLGRRVGQR*VPVAQV Trigger: GACCTGAGCGACGGGAACCCATCGCTGTCCGACCCT...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CCA 90 bp | CTAGATGAGCCACATACAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACAAAGCTTCGAGTGGGCAATaGGTATCCAGTCAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDEPHTACLPILTAKPDKASSGQ*VSSQSP Trigger: TGGAGATTGACTGGATACCCATTGCCCACTCGAAGC...TTTGTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTGTATGTGGCTCATCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAAAACATTGCCCCCGGTTaGCTTCGAGTGGGCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKNIAPG*LRVGNG Trigger: CCCATTGCCCACTCGAAGCCAACCGGGGGCAATGTT...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAATTAAGGGGTATCCAATaGCTTTTTCCAGACACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQLRGIQ*LFPDTQ Trigger: TTGAGTGTCTGGAAAAAGCCATTGGATACCCCTTAA...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAACGAGGTAGCAGTAGATaGTCCGGGTGGGTTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKRGSSR*SGWVPL Trigger: AAGTGGAACCCACCCGGATCATCTACTGCTACCTCG...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR TCA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTCAACCCACTCTTTACTaGAGGTTTTGGCATTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GVVWVMGRRDKTAQAQILQPTLY*RFWHLL Trigger: AAGCAAATGCCAAAACCTTCAGTAAAGAGTGGGTTG...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR GCA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCTGTACAATATTCTaGATGGTATCTCGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQICTIF*MVSRFC Trigger: ACAGAAGCGAGATACCATGCAGAATATTGTACAGAT...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR GCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAGAAGTGACGCACCCCTaGATCCGGCCACCGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKEVTHP*IRPPGS Trigger: AGACCCCGGTGGCCGGATGCAGGGGTGCGTCACTTC...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000239459.2 |
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| CDS-3UTR CCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAAGGCTCCCCGAGGCGTaGAAGGGTCGGACAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKRLPEA*KGRTAM Trigger: CATCGCTGTCCGACCCTTCCACGCCTCGGGGAGCCT...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CCA 90 bp | CAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACAAATCCCCACAAACAGTGCGTACAATATTCTGCATaGTATCTCGCTTCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPVCPFLQQSQTNPHKQCVQYSA*YLASVP Trigger: AGGCACAGAAGCGAGATACCATGCAGAATATTGTAC...GCACTGTTTGTGGGGATTTGTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTGTACAATATTCTGCATaGTATCTCGCTTCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVVWVMGRRDKTAQAQILVQYSA*YLASVP Trigger: AGGCACAGAAGCGAGATACCATGCAGAATATTGTAC...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CCA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAACCGGTTGGCTTCGAGTaGGCAATGGGTATCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKPVGFE*AMGIQS Trigger: TGACTGGATACCCATTGCCCACTCGAAGCCAACCGG...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CCA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGCCTGGGTCCAGAGCATaGCGCTCCACATCTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQKSLQATLIGNSKTLGRPGSRA*RSTSGE Trigger: CTCACCAGATGTGGAGCGCCATGCTCTGGACCCAGG...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR TCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAATGCCCCATACAGCGATaGGCGCGTTCGTCTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKCPIQR*ARSSLP Trigger: CGGCAGAGACGAACGCGCTCATCGCTGTATGGGGCA...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR TCA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAATCCCCAGTCCTCCTGTaGATAGTCCTCCATAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKSPVLL*IVLHSA Trigger: AGCACTATGGAGGACTATTCACAGGAGGACTGGGGA...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CCA 90 bp | GTACTATCTTCATTGTTAATATATATAGAAAAGAGTGCATTTGCGGGGCTTGGGCCTGGGTCCAGAGCATaGCGCTCCACATCTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLSSLLIYIEKSAFAGLGPGSRA*RSTSGE Trigger: CTCACCAGATGTGGAGCGCCATGCTCTGGACCCAGG...CCCAAGCCCCGCAAATGCACTCTTTTCTATATATATTAACAATGAAGATAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTTTAAGGGGTATCCAATaGCTTTTTCCAGACACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GVVWVMGRRDKTAQAQILLRGIQ*LFPDTQ Trigger: TTGAGTGTCTGGAAAAAGCCATTGGATACCCCTTAA...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CCA 90 bp | CACAGCTGGAGCACAGCATTCAGGTCTGGGCATCGAACCAGCTGTCTGAAAACATTTCCTTCTCATAACTaGACAATGAAGCATTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSWSTAFRSGHRTSCLKTFPSHN*TMKHSN Trigger: GTTGGAATGCTTCATTGTCCAGTTATGAGAAGGAAA...TGTTTTCAGACAGCTGGTTCGATGCCCAGACCTGAATGCTGTGCTCCAGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209391.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGCGAGGTAGCAGTAGATaGTCCGGGTGGGTTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: KQKSLQATLIGNSKTLGRRGSSR*SGWVPL Trigger: AAGTGGAACCCACCCGGATCATCTACTGCTACCTCG...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTATCTGTACAATATTCTaGATGGTATCTCGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVVWVMGRRDKTAQAQILICTIF*MVSRFC Trigger: ACAGAAGCGAGATACCATGCAGAATATTGTACAGAT...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAAGCTTCGAGTGGGCAATaGGTATCCAGTCAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKASSGQ*VSSQSP Trigger: TGGAGATTGACTGGATACCCATTGCCCACTCGAAGC...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAACCATCTTCGGAATTTTaGGCGGCGAGTTGGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKPSSEF*AASWRA Trigger: TGCCCGCCAACTCGCCGCTCAAAATTCCGAAGATGG...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAACCTGGCAATAAATACTaGACAACATTGCCCCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKPGNKY*TTLPPV Trigger: AACCGGGGGCAATGTTGTTCAGTATTTATTGCCAGG...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAAGGTATCTCGCTTCTGTaGCTCTTCAGAAGACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKGISLL*LFRRLL Trigger: CAAGAGTCTTCTGAAGAGGCACAGAAGCGAGATACC...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGGCTTCGAGTGGGCAATaGGTATCCAGTCAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQKSLQATLIGNSKTLGRASSGQ*VSSQSP Trigger: TGGAGATTGACTGGATACCCATTGCCCACTCGAAGC...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAACCGGTTGGCTTCGAGTaGGCAATGGGTATCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKPVGFE*AMGIQS Trigger: TGACTGGATACCCATTGCCCACTCGAAGCCAACCGG...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAATCCCCAGTCCTCCTGTaGATAGTCCTCCATAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKSPVLL*IVLHSA Trigger: AGCACTATGGAGGACTATTCACAGGAGGACTGGGGA...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGCCTGGCAATAAATACTaGACAACATTGCCCCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KQKSLQATLIGNSKTLGRPGNKY*TTLPPV Trigger: AACCGGGGGCAATGTTGTTCAGTATTTATTGCCAGG...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAACAGGCTTCTCAGAGTTaGAATACTCGCGAAGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKQASQS*NTREDA Trigger: AGCGTCTTCGCGAGTATTTCAACTCTGAGAAGCCTG...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAGCTTCGAGTGGGCAATaGGTATCCAGTCAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKASSGQ*VSSQSP Trigger: TGGAGATTGACTGGATACCCATTGCCCACTCGAAGC...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAATTAAGGGGTATCCAATaGCTTTTTCCAGACACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKLRGIQ*LFPDTQ Trigger: TTGAGTGTCTGGAAAAAGCCATTGGATACCCCTTAA...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGCAACCCACTCTTTACTaGAGGTTTTGGCATTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQKSLQATLIGNSKTLGRQPTLY*RFWHLL Trigger: AAGCAAATGCCAAAACCTTCAGTAAAGAGTGGGTTG...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGCTACTTCTACAAATTTaGTGTAGATGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQKSLQATLIGNSKTLGRLLLQI*CRWTWG Trigger: CCCCCAAGTCCATCTACATCAAATTTGTAGAAGTAG...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR GCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAGGTATCTCGCTTCTGTaGCTCTTCAGAAGACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKGISLL*LFRRLL Trigger: CAAGAGTCTTCTGAAGAGGCACAGAAGCGAGATACC...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAAATCTGTACAATATTCTaGATGGTATCTCGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKICTIF*MVSRFC Trigger: ACAGAAGCGAGATACCATGCAGAATATTGTACAGAT...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR GCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAAATACTGAACAACATTaGCCCCGGTTGGCTTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKNTEQH*PRLASS Trigger: ACTCGAAGCCAACCGGGGGCAATGTTGTTCAGTATT...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAACAACCCACTCTTTACTaGAGGTTTTGGCATTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKQPTLY*RFWHLL Trigger: AAGCAAATGCCAAAACCTTCAGTAAAGAGTGGGTTG...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR TCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAACTACTTCTACAAATTTaGTGTAGATGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKLLLQI*CRWTWG Trigger: CCCCCAAGTCCATCTACATCAAATTTGTAGAAGTAG...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAGTACAATATTCTGCATaGTATCTCGCTTCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKVQYSA*YLASVP Trigger: AGGCACAGAAGCGAGATACCATGCAGAATATTGTAC...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAATTAAGGGGTATCCAATaGCTTTTTCCAGACACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKLRGIQ*LFPDTQ Trigger: TTGAGTGTCTGGAAAAAGCCATTGGATACCCCTTAA...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR GCA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAATCTGTACAATATTCTaGATGGTATCTCGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTSHKQKSLQATLIGNSKICTIF*MVSRFC Trigger: ACAGAAGCGAGATACCATGCAGAATATTGTACAGAT...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| 3UTR CAA 72 bp | CTTTTGTTTAGACACAGAAAGATCAAGGCATCAAGTTaGTCCTTTTACTACTTAGCAGACTTACCTCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: LLFRHRKIKASS*SFYYLADLPQL Trigger: TAATTGAGGTAAGTCTGCTAAGTAGTAAAAGGACAAACTTGATGCCTTGATCTTTCTGTGTCTAAACAAAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| CDS CCA 90 bp | AGCCCGCCGCGCTGCCGGGCCCGAGAGGGGAGGCTCCCCGAGGCGTaGAAGGGTCGGACAGCGATGGGTTCCCGTCGCTCAGGTCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPPRCRAREGRLPEA*KGRTAMGSRRSGRR Trigger: CCGGCGACCTGAGCGACGGGAACCCATCGCTGTCCGACCCTTCCACGCCTCGGGGAGCCTCCCCTCTCGGGCCCGGCAGCGCGGCGGGCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS CCA 90 bp | CTCCAGCCAGCTGGTGCCGGCCGCTCCTCTCCCGGGAGGAGAAGCTaGGACCCGGCGCACCCAAGCTCCGAGCAGAGAAGGGTGGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LQPAGAGRSSPGRRS*DPAHPSSEQRRVGA Trigger: TGCCCCCACCCTTCTCTGCTCGGAGCTTGGGTGCGCCGGGTCCCAGCTTCTCCTCCCGGGAGAGGAGCGGCCGGCACCAGCTGGCTGGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239459.2 |
||
| CDS CCA 90 bp | TGGCCCAAGCAGCCCGCAAATCTTCGCCTTTCCCCTCCAGCCAGCTaGTGCCGGCCGCTCCTCTCCCGGGAGGAGAAGCTGGGACCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: WPKQPANLRLSPPAS*CRPLLSREEKLGPG Trigger: GCCGGGTCCCAGCTTCTCCTCCCGGGAGAGGAGCGGCCGGCACCAGCTGGCTGGAGGGGAAAGGCGAAGATTTGCGGGCTGCTTGGGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239459.2 |
||
| CDS CCA 90 bp | GGGGCTGAGTGGCTCGCCGCGGTCAGAGGGCCCGGAGGATGTGTCTaGCTGGCCCAAGCAGCCCGCAAATCTTCGCCTTTCCCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GAEWLAAVRGPGGCV*LAQAARKSSPFPSS Trigger: GCTGGAGGGGAAAGGCGAAGATTTGCGGGCTGCTTGGGCCAGCCAGACACATCCTCCGGGCCCTCTGACCGCGGCGAGCCACTCAGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239459.2 |
||
| CDS TCA 90 bp | GGTCGCCGGGAGACGCCGGGGAAAGCACCTCCATCTTCGGAATTTTaGGCGGCGAGTTGGCGGGCAGCTCCGAGCCACAGGGCGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRRETPGKAPPSSEF*AASWRAAPSHRAQP Trigger: TGGCTGCGCCCTGTGGCTCGGAGCTGCCCGCCAACTCGCCGCTCAAAATTCCGAAGATGGAGGTGCTTTCCCCGGCGTCTCCCGGCGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS CCA 90 bp | CTGAGTGGCTCGCCGCGGTCAGAGGGCCCGGAGGATGTGTCTGGCTaGCCCAAGCAGCCCGCAAATCTTCGCCTTTCCCCTCCAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSGSPRSEGPEDVSG*PKQPANLRLSPPAS Trigger: GCTGGCTGGAGGGGAAAGGCGAAGATTTGCGGGCTGCTTGGGCCAGCCAGACACATCCTCCGGGCCCTCTGACCGCGGCGAGCCACTCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239459.2 |
||
| CDS-3UTR CAA 90 bp | GGTGAGGCCACAGCTGGAGCACAGCATTCAGGTCTGGGCATCGAACCAGCTGTCGCCGGCCCAGGGGCCTaGCTGCCGAATACCGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GEATAGAQHSGLGIEPAVAGPGA*LPNTVP Trigger: CGGCACGGTATTCGGCAGCAAGGCCCCTGGGCCGGC...GACAGCTGGTTCGATGCCCAGACCTGAATGCTGTGCTCCAGCTGTGGCCTCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209391.2 |
||
| CDS-3UTR CAA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAGCCGGCCCAGGGGCCTaGCTGCCGAATACCGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQAGPGA*LPNTVP Trigger: CGGCACGGTATTCGGCAGCAAGGCCCCTGGGCCGGC...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | GGCCACAGCTGGAGCACAGCATTCAGGTCTGGGCATCGAACCAGCTGTCTGAAATCCACCAGCCGCTCGTaGCCCCATACAGCGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHSWSTAFRSGHRTSCLKSTSRS*PHTAMS Trigger: GCTCATCGCTGTATGGGGCAACGAGCGGCTGGTGGA...TTTCAGACAGCTGGTTCGATGCCCAGACCTGAATGCTGTGCTCCAGCTGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209391.2 |
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| CDS-3UTR CAA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAATCCACCAGCCGCTCGTaGCCCCATACAGCGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQSTSRS*PHTAMS Trigger: GCTCATCGCTGTATGGGGCAACGAGCGGCTGGTGGA...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTCACCTGCGAAGGGTCTaGATGCGCTCCCGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GVVWVMGRRDKTAQAQILHLRRV*MRSRHW Trigger: CCAGTGCCGGGAGCGCATCAAGACCCTTCGCAGGTG...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAACAACATTGCCCCCGGTaGGCTTCGAGTGGGCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQQHCPR*ASSGQW Trigger: CCATTGCCCACTCGAAGCCAACCGGGGGCAATGTTG...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTTCCACCAGCCGCTCGTaGCCCCATACAGCGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVVWVMGRRDKTAQAQILSTSRS*PHTAMS Trigger: GCTCATCGCTGTATGGGGCAACGAGCGGCTGGTGGA...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | CAGCTGGAGCACAGCATTCAGGTCTGGGCATCGAACCAGCTGTCTGAAAACAGGCAACTAGATATCCCCTaGATGCGCTCCCGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLEHSIQVWASNQLSENRQLDIP*MRSRHW Trigger: CCAGTGCCGGGAGCGCATCAAGGGGATATCTAGTTG...CCTGTTTTCAGACAGCTGGTTCGATGCCCAGACCTGAATGCTGTGCTCCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209391.2 |
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| CDS-3UTR CAA 90 bp | CATCTAGATGAGCCACATACAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACATTTTGAGCGGCGAGTaGGCGGGCAGCTCCGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HLDEPHTACLPILTAKPDILSGE*AGSSEP Trigger: TGGCTCGGAGCTGCCCGCCAACTCGCCGCTCAAAAT...GTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTGTATGTGGCTCATCTAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| CDS-3UTR CAA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAAGCCGGCCCAGGGGCCTaGCTGCCGAATACCGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKAGPGA*LPNTVP Trigger: CGGCACGGTATTCGGCAGCAAGGCCCCTGGGCCGGC...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTTCCATCTTCGGAATTTaGAGCGGCGAGTTGGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVVWVMGRRDKTAQAQILSIFGI*SGELAG Trigger: GCCCGCCAACTCGCCGCTCAAAATTCCGAAGATGGA...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAATCAGGCTTCTCAGAGTaGAAATACTCGCGAAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQSGFSE*KYSRRR Trigger: GCGTCTTCGCGAGTATTTCAACTCTGAGAAGCCTGA...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAACACCTGCGAAGGGTCTaGATGCGCTCCCGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKHLRRV*MRSRHW Trigger: CCAGTGCCGGGAGCGCATCAAGACCCTTCGCAGGTG...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS CCA 90 bp | ATAAATACTGAACAACATTGCCCCCGGTTGGCTTCGAGTGGGCAATaGGTATCCAGTCAATCTCCATGTGCAGCTCTAGGCACCTCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: INTEQHCPRLASSGQ*VSSQSPCAALGTSL Trigger: AAGCGAGGTGCCTAGAGCTGCACATGGAGATTGACTGGATACCCATTGCCCACTCGAAGCCAACCGGGGGCAATGTTGTTCAGTATTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAAATTTTGAGCGGCGAGTaGGCGGGCAGCTCCGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKILSGE*AGSSEP Trigger: TGGCTCGGAGCTGCCCGCCAACTCGCCGCTCAAAAT...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CAA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAGCCGGCCCAGGGGCCTaGCTGCCGAATACCGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GTSHKQKSLQATLIGNSKAGPGA*LPNTVP Trigger: CGGCACGGTATTCGGCAGCAAGGCCCCTGGGCCGGC...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CAA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGCACCTGCGAAGGGTCTaGATGCGCTCCCGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KQKSLQATLIGNSKTLGRHLRRV*MRSRHW Trigger: CCAGTGCCGGGAGCGCATCAAGACCCTTCGCAGGTG...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAACAACATTGCCCCCGGTaGGCTTCGAGTGGGCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKQHCPR*ASSGQW Trigger: CCATTGCCCACTCGAAGCCAACCGGGGGCAATGTTG...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CAA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGATTTTGAGCGGCGAGTaGGCGGGCAGCTCCGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KQKSLQATLIGNSKTLGRILSGE*AGSSEP Trigger: TGGCTCGGAGCTGCCCGCCAACTCGCCGCTCAAAAT...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CAA 90 bp | GGACGTGGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAATCTTTACTGAAGGTTTaGGCATTTGCTTGGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: GRGVVWVMGRRDKTAQAQSLLKV*AFAWKC Trigger: ACATTTCCAAGCAAATGCCAAAACCTTCAGTAAAGA...TTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCCACGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CAA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGTCCATCTTCGGAATTTaGAGCGGCGAGTTGGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KQKSLQATLIGNSKTLGRSIFGI*SGELAG Trigger: GCCCGCCAACTCGCCGCTCAAAATTCCGAAGATGGA...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTAAAATGGCCAATTTATaGGAAAGATGGAGCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GVVWVMGRRDKTAQAQILKMANL*ERWSLE Trigger: CTCAAGGCTCCATCTTTCCAATAAATTGGCCATTTT...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTAGTCTGGGTAATGGGAAGAAGGGACAAGACTGCACAAGCCCAAATCCTTTTTCCAGTTCATTTTTaGCACCCGGGTCATAATGAT | + |
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Preference number: 5 (lower is better) Translates to: GVVWVMGRRDKTAQAQILFPVHF*HPGHND Trigger: ATCATTATGACCCGGGTGCAAAAAATGAACTGGAAA...AAGGATTTGGGCTTGTGCAGTCTTGTCCCTTCTTCCCATTACCCAGACTACCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | CATCTAGATGAGCCACATACAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACAAAATGGCCAATTTATaGGAAAGATGGAGCCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: HLDEPHTACLPILTAKPDKMANL*ERWSLE Trigger: CTCAAGGCTCCATCTTTCCAATAAATTGGCCATTTT...GTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTGTATGTGGCTCATCTAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| CDS-3UTR CAA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAATCAGGCTTCTCAGAGTaGAAATACTCGCGAAGACGC | + |
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Preference number: 5 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKSGFSE*KYSRRR Trigger: GCGTCTTCGCGAGTATTTCAACTCTGAGAAGCCTGA...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | CTAGATGAGCCACATACAGCCTGTCTGCCCATTCTTACAGCAAAGCCAGACAAATTTCCAGTTCATTTTTaGCACCCGGGTCATAATGAT | + |
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Preference number: 5 (lower is better) Translates to: LDEPHTACLPILTAKPDKFPVHF*HPGHND Trigger: ATCATTATGACCCGGGTGCAAAAAATGAACTGGAAA...TTTGTCTGGCTTTGCTGTAAGAATGGGCAGACAGGCTGTATGTGGCTCATCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211060.2 |
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| CDS-3UTR CAA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAATCAGGCTTCTCAGAGTaGAAATACTCGCGAAGACGC | + |
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Preference number: 5 (lower is better) Translates to: GTSHKQKSLQATLIGNSKSGFSE*KYSRRR Trigger: GCGTCTTCGCGAGTATTTCAACTCTGAGAAGCCTGA...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | TTCCTGCCCAGAGTCTATGATTTCTTAGAGGTTGTATTGGTCTCATCGTGGAAATCTTTACTGAAGGTTTaGGCATTTGCTTGGAAATGT | + |
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Preference number: 5 (lower is better) Translates to: FLPRVYDFLEVVLVSSWKSLLKV*AFAWKC Trigger: ACATTTCCAAGCAAATGCCAAAACCTTCAGTAAAGA...TTTCCACGATGAGACCAATACAACCTCTAAGAAATCATAGACTCTGGGCAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGAAAATGGCCAATTTATaGGAAAGATGGAGCCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: KQKSLQATLIGNSKTLGRKMANL*ERWSLE Trigger: CTCAAGGCTCCATCTTTCCAATAAATTGGCCATTTT...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | AAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAAACACTTGGTCGGTCTTTACTGAAGGTTTaGGCATTTGCTTGGAAATGT | + |
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Preference number: 5 (lower is better) Translates to: KQKSLQATLIGNSKTLGRSLLKV*AFAWKC Trigger: ACATTTCCAAGCAAATGCCAAAACCTTCAGTAAAGA...CCGACCAAGTGTTTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS-3UTR CAA 90 bp | GGTACATCACATAAACAAAAGTCTTTGCAGGCAACACTGATTGGAAATAGTAAATTTCCAGTTCATTTTTaGCACCCGGGTCATAATGAT | + |
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Preference number: 5 (lower is better) Translates to: GTSHKQKSLQATLIGNSKFPVHF*HPGHND Trigger: ATCATTATGACCCGGGTGCAAAAAATGAACTGGAAA...TTTACTATTTCCAATCAGTGTTGCCTGCAAAGACTTTTGTTTATGTGATGTACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS CCA 72 bp | GGAGGCTCCCCGAGGCGTGGAAGGGTCGGACAGCGATaGGTTCCCGTCGCTCAGGTCGCCGGGAGACGCCGG | + |
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Preference number: 6 (lower is better) Translates to: GGSPRRGRVGQR*VPVAQVAGRRR Trigger: CCGGCGTCTCCCGGCGACCTGAGCGACGGGAACCCATCGCTGTCCGACCCTTCCACGCCTCGGGGAGCCTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS CCA 72 bp | CGCTGCCGGGCCCGAGAGGGGAGGCTCCCCGAGGCGTaGAAGGGTCGGACAGCGATGGGTTCCCGTCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RCRAREGRLPEA*KGRTAMGSRRS Trigger: TGAGCGACGGGAACCCATCGCTGTCCGACCCTTCCACGCCTCGGGGAGCCTCCCCTCTCGGGCCCGGCAGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS CCA 72 bp | GCTGGTGCCGGCCGCTCCTCTCCCGGGAGGAGAAGCTaGGACCCGGCGCACCCAAGCTCCGAGCAGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: AGAGRSSPGRRS*DPAHPSSEQRR Trigger: CCTTCTCTGCTCGGAGCTTGGGTGCGCCGGGTCCCAGCTTCTCCTCCCGGGAGAGGAGCGGCCGGCACCAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239459.2 |
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| CDS GCA 72 bp | GGGACACGCGCTCGTACATGGCCGGCCCAGGGGCCTTaGTGCCGAATACCGTGCCGGCTCCCTCCAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GTRARTWPAQGP*CRIPCRLPPAA Trigger: AGCAGCTGGAGGGAGCCGGCACGGTATTCGGCAGCAAGGCCCCTGGGCCGGCCATGTACGAGCGCGTGTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048604.8 ENSMUST00000209391.2 ENSMUST00000214298.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS GCA 72 bp | ACACGCGCTCGTACATGGCCGGCCCAGGGGCCTTGCTaGCGAATACCGTGCCGGCTCCCTCCAGCTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: TRARTWPAQGPC*RIPCRLPPAAG Trigger: ACCAGCAGCTGGAGGGAGCCGGCACGGTATTCGGCAGCAAGGCCCCTGGGCCGGCCATGTACGAGCGCGTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048604.8 ENSMUST00000209391.2 ENSMUST00000214298.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS CAA 90 bp | AGGTCGCCGGGAGACGCCGGGGAAAGCACCTCCATCTTCGGAATTTaGAGCGGCGAGTTGGCGGGCAGCTCCGAGCCACAGGGCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RSPGDAGESTSIFGI*SGELAGSSEPQGAA Trigger: GGCTGCGCCCTGTGGCTCGGAGCTGCCCGCCAACTCGCCGCTCAAAATTCCGAAGATGGAGGTGCTTTCCCCGGCGTCTCCCGGCGACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS CAA 90 bp | GACGCCGGGGAAAGCACCTCCATCTTCGGAATTTTGAGCGGCGAGTaGGCGGGCAGCTCCGAGCCACAGGGCGCAGCCATCTTCCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: DAGESTSIFGILSGE*AGSSEPQGAAIFQA Trigger: GGCTTGGAAGATGGCTGCGCCCTGTGGCTCGGAGCTGCCCGCCAACTCGCCGCTCAAAATTCCGAAGATGGAGGTGCTTTCCCCGGCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239459.2 |
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| CDS TCA 72 bp | GAGACGCCGGGGAAAGCACCTCCATCTTCGGAATTTTaGGCGGCGAGTTGGCGGGCAGCTCCGAGCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: ETPGKAPPSSEF*AASWRAAPSHR Trigger: CCTGTGGCTCGGAGCTGCCCGCCAACTCGCCGCTCAAAATTCCGAAGATGGAGGTGCTTTCCCCGGCGTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS CAA 72 bp | GGAGACGCCGGGGAAAGCACCTCCATCTTCGGAATTTaGAGCGGCGAGTTGGCGGGCAGCTCCGAGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: GDAGESTSIFGI*SGELAGSSEPQ Trigger: CTGTGGCTCGGAGCTGCCCGCCAACTCGCCGCTCAAAATTCCGAAGATGGAGGTGCTTTCCCCGGCGTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048604.8 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS CAA 72 bp | GAAAGCACCTCCATCTTCGGAATTTTGAGCGGCGAGTaGGCGGGCAGCTCCGAGCCACAGGGCGCAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: ESTSIFGILSGE*AGSSEPQGAAI Trigger: GATGGCTGCGCCCTGTGGCTCGGAGCTGCCCGCCAACTCGCCGCTCAAAATTCCGAAGATGGAGGTGCTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239459.2 |
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| CDS CCA 72 bp | GAACAACATTGCCCCCGGTTGGCTTCGAGTGGGCAATaGGTATCCAGTCAATCTCCATGTGCAGCTCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: EQHCPRLASSGQ*VSSQSPCAALG Trigger: GCCTAGAGCTGCACATGGAGATTGACTGGATACCCATTGCCCACTCGAAGCCAACCGGGGGCAATGTTGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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| CDS GCA 72 bp | TTCGAGTGGGCAATGGGTATCCAGTCAATCTCCATGTaGAGCTCTAGGCACCTCGCTTCACTGATGGTGATC | + |
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Preference number: 6 (lower is better) Translates to: FEWAMGIQSISM*SSRHLASLMVI Trigger: GATCACCATCAGTGAAGCGAGGTGCCTAGAGCTGCACATGGAGATTGACTGGATACCCATTGCCCACTCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048604.8 ENSMUST00000211060.2 ENSMUST00000239459.2 ENSMUST00000239463.2 |
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