Pregenerated sensors for MSANTD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051246Ensembl transcript IDs: ENSMUST00000050535.2, ENSMUST00000202205.2, ENSMUST00000212362.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTGTTTCAAGTATCAGATAGAGACTATACTGGAGAGTGGCTTCTaGGACCTTCTCACTACCTGTCGTCTTGGAGTCCCTAGATTAATG | + |
|
Preference number: 1 (lower is better) Translates to: SCFKYQIETILESGF*DLLTTCRLGVPRLM Trigger: CATTAATCTAGGGACTCCAAGACGACAGGTAGTGAGAAGGTCCCAGAAGCCACTCTCCAGTATAGTCTCTATCTGATACTTGAAACAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGGTCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGGGCTGGAACTCGGCCTaGGTGAGCAGAACTCTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: KVSQCHWSPRKPFREAQRGWNSA*VSRTLS Trigger: GCTCAGAGTTCTGCTCACTCAGGCCGAGTTCCAGCC...CCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| 3UTR CCA 72 bp | GCTGGAGATGGGGATCCCAAGGTCTCCCAATGCCACTaGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AGDGDPKVSQCH*SPRKPFREAQR Trigger: CCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGACCTTGGGATCCCCATCTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| 3UTR GCA 72 bp | ATTAATGCTGGAGATGGGGATCCCAAGGTCTCCCAATaGCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: INAGDGDPKVSQ*HWSPRKPFREA Trigger: TGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGACCTTGGGATCCCCATCTCCAGCATTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| 3UTR CCA 72 bp | AAGTATCAGATAGAGACTATACTGGAGAGTGGCTTCTaGGACCTTCTCACTACCTGTCGTCTTGGAGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KYQIETILESGF*DLLTTCRLGVP Trigger: AGGGACTCCAAGACGACAGGTAGTGAGAAGGTCCCAGAAGCCACTCTCCAGTATAGTCTCTATCTGATACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCAGGCATGTCTCCTCCATaGCACGGCTCAGCCGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRTLSLGGPRDRTAWHLAGMSPP*HGSAGA Trigger: AGCGCCGGCTGAGCCGTGCCATGGAGGAGACATGCC...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCACCTCCCAGACCAGCATaGGGCCGCGCATCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRTLSLGGPRDRTAWHLAPPRPA*GRASLH Trigger: ATGCAGAGATGCGCGGCCTCATGCTGGTCTGGGAGG...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCAGAGGCCGCGCATCTCTaGATCTGTCCAGTTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRTLSLGGPRDRTAWHLAEAAHL*ICPVAG Trigger: GCCCGCAACTGGACAGATGCAGAGATGCGCGGCCTC...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCAACCTGCAGGATGTTCTaGTGGTCCAGCACACGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRTLSLGGPRDRTAWHLATCRMF*WSSTRR Trigger: GCGCCGTGTGCTGGACCAGCAGAACATCCTGCAGGT...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCATGCAGGCTCTGGACCTaGAGGATGTTCTGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRTLSLGGPRDRTAWHLACRLWT*RMFCWS Trigger: GGACCAGCAGAACATCCTGCAGGTCCAGAGCCTGCA...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCAGAGGGCCCCGGCTGCTaGCCATCCGGCAGTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSQCHWSPRKPFREAQRPEGPGC*PSGSLP Trigger: GGGCAAACTGCCGGATGGCCAGCAGCCGGGGCCCTC...TGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGGAGAGTGGCTTCTGGGACCTTCTCACTACCTGTCGTCTTGGAGTCCCTAGGGACGCCTCGGTCTaGGACGTAGAGGGCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILESGFWDLLTTCRLGVPRDASV*DVEGPG Trigger: GCCGGGGCCCTCTACGTCCCAGACCGAGGCGTCCCT...AGGGACTCCAAGACGACAGGTAGTGAGAAGGTCCCAGAAGCCACTCTCCAGTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCATGCGCTTGGTCTGCTTaGGCTCATCAAAGAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRTLSLGGPRDRTAWHLACAWSA*AHQRTP Trigger: AGGAGTTCTTTGATGAGCTCAAGCAGACCAAGCGCA...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCACGTTGGACTTGGCAATaGTCTTCTCCAGTAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRTLSLGGPRDRTAWHLARWTWQ*SSPVGS Trigger: TGAGCCTACTGGAGAAGATCATTGCCAAGTCCAACG...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCATCTTCTCGTACACCTTaGCATTGCGCTTGGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRTLSLGGPRDRTAWHLASSRTP*HCAWSA Trigger: AGCAGACCAAGCGCAATGCCAAGGTGTACGAGAAGA...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCAGGGCATGTCTCCTCCATaGCACGGCTCAGCCGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPNATGVLESPSEKHRGQGMSPP*HGSAGA Trigger: AGCGCCGGCTGAGCCGTGCCATGGAGGAGACATGCC...CTGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR TCA 90 bp | GTCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCACCTCCCAGACCAGCATaGGGCCGCGCATCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSQCHWSPRKPFREAQRPPPRPA*GRASLH Trigger: ATGCAGAGATGCGCGGCCTCATGCTGGTCTGGGAGG...TGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCAGGAGGCCGCGCATCTCTaGATCTGTCCAGTTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNATGVLESPSEKHRGQEAAHL*ICPVAG Trigger: GCCCGCAACTGGACAGATGCAGAGATGCGCGGCCTC...CTGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCAGCATTGCGCTTGGTCTaGTTGAGCTCATCAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRTLSLGGPRDRTAWHLAALRLV*LSSSKN Trigger: GTTCTTTGATGAGCTCAAGCAGACCAAGCGCAATGC...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGGAGAGTGGCTTCTGGGACCTTCTCACTACCTGTCGTCTTGGAGTCCCTGTAGAGGGCCCCGGCTaGTGGCCATCCGGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILESGFWDLLTTCRLGVPVEGPG*WPSGSL Trigger: CAAACTGCCGGATGGCCAGCAGCCGGGGCCCTCTAC...AGGGACTCCAAGACGACAGGTAGTGAGAAGGTCCCAGAAGCCACTCTCCAGTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCATCTCAAAGAGCTTGCTaGCCATCTTCTCGTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: SRTLSLGGPRDRTAWHLASQRAC*PSSRTP Trigger: AGGTGTACGAGAAGATGGCCAGCAAGCTCTTTGAGA...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCATCATCTCAAAGAGCTTaGTGGCCATCTTCTCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SRTLSLGGPRDRTAWHLASSQRA*WPSSRT Trigger: TGTACGAGAAGATGGCCAGCAAGCTCTTTGAGATGA...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCAGGCCATCCGGCAGTTTaGCCTCACAGGACTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSQCHWSPRKPFREAQRPGHPAV*PHRTQG Trigger: TCCCTGAGTCCTGTGAGGGCAAACTGCCGGATGGCC...TGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCAGACCTGCAGGATGTTCTaGTGGTCCAGCACACGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNATGVLESPSEKHRGQTCRMF*WSSTRR Trigger: GCGCCGTGTGCTGGACCAGCAGAACATCCTGCAGGT...CTGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCAGGCCAGTCCGGCGGGATaGACTCGCTATCTGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNATGVLESPSEKHRGQASPAG*TRYLSC Trigger: GCATGACAGATAGCGAGTCCATCCCGCCGGACTGGC...CTGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCATCCTCTGACCTGTACTaGAAGGTCATGTTGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SRTLSLGGPRDRTAWHLASSDLY*KVMLVI Trigger: AATCACCAACATGACCTTCCAGTACAGGTCAGAGGA...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202205.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGGAGAGTGGCTTCTGGGACCTTCTCACTACCTGTCGTCTTGGAGTCCCTCTCATCATTCGCTCCTaGAGCTGCAGGCTCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: ILESGFWDLLTTCRLGVPLIIRS*SCRLWT Trigger: GGTCCAGAGCCTGCAGCTTCAGGAGCGAATGATGAG...AGGGACTCCAAGACGACAGGTAGTGAGAAGGTCCCAGAAGCCACTCTCCAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGGAGAGTGGCTTCTGGGACCTTCTCACTACCTGTCGTCTTGGAGTCCCTTGCAGGCTCTGGACCTaGAGGATGTTCTGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILESGFWDLLTTCRLGVPCRLWT*RMFCWS Trigger: GGACCAGCAGAACATCCTGCAGGTCCAGAGCCTGCA...AGGGACTCCAAGACGACAGGTAGTGAGAAGGTCCCAGAAGCCACTCTCCAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCATCTTCTCGTACACCTTaGCATTGCGCTTGGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSQCHWSPRKPFREAQRPSSRTP*HCAWSA Trigger: AGCAGACCAAGCGCAATGCCAAGGTGTACGAGAAGA...TGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGGAGAGTGGCTTCTGGGACCTTCTCACTACCTGTCGTCTTGGAGTCCCTTGCGCTTGGTCTGCTTaGGCTCATCAAAGAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILESGFWDLLTTCRLGVPCAWSA*AHQRTP Trigger: AGGAGTTCTTTGATGAGCTCAAGCAGACCAAGCGCA...AGGGACTCCAAGACGACAGGTAGTGAGAAGGTCCCAGAAGCCACTCTCCAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGGAGAGTGGCTTCTGGGACCTTCTCACTACCTGTCGTCTTGGAGTCCCTCGTTGGACTTGGCAATaGTCTTCTCCAGTAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILESGFWDLLTTCRLGVPRWTWQ*SSPVGS Trigger: TGAGCCTACTGGAGAAGATCATTGCCAAGTCCAACG...AGGGACTCCAAGACGACAGGTAGTGAGAAGGTCCCAGAAGCCACTCTCCAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCATCTCAAAGAGCTTGCTaGCCATCTTCTCGTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: VSQCHWSPRKPFREAQRPSQRAC*PSSRTP Trigger: AGGTGTACGAGAAGATGGCCAGCAAGCTCTTTGAGA...TGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCAGCCAGAATCCTATCAATaGCTAGGTAATAGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPNATGVLESPSEKHRGQPESYQ*LGNRAS Trigger: ACTGGCCCTATTACCTAGCCATTGATAGGATTCTGG...CTGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGGAGAGTGGCTTCTGGGACCTTCTCACTACCTGTCGTCTTGGAGTCCCTTCATCTCAAAGAGCTTaGTGGCCATCTTCTCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: ILESGFWDLLTTCRLGVPSSQRA*WPSSRT Trigger: TGTACGAGAAGATGGCCAGCAAGCTCTTTGAGATGA...AGGGACTCCAAGACGACAGGTAGTGAGAAGGTCCCAGAAGCCACTCTCCAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCAGACTCGCTATCTGTCATaGATTTTAATTTCCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SPNATGVLESPSEKHRGQTRYLS*ILISCT Trigger: AGTACAGGAAATTAAAATGCATGACAGATAGCGAGT...CTGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCATTTAATTTCCTGTACTaGAAGGTCATGTTGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VSQCHWSPRKPFREAQRPFNFLY*KVMLVI Trigger: AATCACCAACATGACCTTCCAGTACAGGAAATTAAA...TGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS CCA 90 bp | GGCGACAGGGACGCCTCGGTCTGGGACGTAGAGGGCCCCGGCTGCTaGCCATCCGGCAGTTTGCCCTCACAGGACTCAGGGACCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GDRDASVWDVEGPGC*PSGSLPSQDSGTLA Trigger: GGCCAAGGTCCCTGAGTCCTGTGAGGGCAAACTGCCGGATGGCCAGCAGCCGGGGCCCTCTACGTCCCAGACCGAGGCGTCCCTGTCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS GCA 90 bp | GACGGCGACAGGGACGCCTCGGTCTGGGACGTAGAGGGCCCCGGCTaGTGGCCATCCGGCAGTTTGCCCTCACAGGACTCAGGGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGDRDASVWDVEGPG*WPSGSLPSQDSGTL Trigger: CAAGGTCCCTGAGTCCTGTGAGGGCAAACTGCCGGATGGCCAGCAGCCGGGGCCCTCTACGTCCCAGACCGAGGCGTCCCTGTCGCCGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS CCA 90 bp | TACAGAGGGGTGGACTTAGCAGACGGCGACAGGGACGCCTCGGTCTaGGACGTAGAGGGCCCCGGCTGCTGGCCATCCGGCAGTTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YRGVDLADGDRDASV*DVEGPGCWPSGSLP Trigger: GGGCAAACTGCCGGATGGCCAGCAGCCGGGGCCCTCTACGTCCCAGACCGAGGCGTCCCTGTCGCCGTCTGCTAAGTCCACCCCTCTGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCATCGGCTGCTGCCATGTaGGAGGCACCTGCAGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SRTLSLGGPRDRTAWHLASAAAM*EAPAGL Trigger: TAACCCTGCAGGTGCCTCCAACATGGCAGCAGCCGA...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS GCA 90 bp | CACAAGGTAGCCAGGCACTTCGGCTGCTGCCATGTTGGAGGCACCTaGAGGGTTAAGGATGGCACTCAGGCAGGGCCTCAGGCCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HKVARHFGCCHVGGT*RVKDGTQAGPQAWP Trigger: TGGCCAGGCCTGAGGCCCTGCCTGAGTGCCATCCTTAACCCTGCAGGTGCCTCCAACATGGCAGCAGCCGAAGTGCCTGGCTACCTTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCATCGTACACCTTGGCATaGCGCTTGGTCTGCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRTLSLGGPRDRTAWHLASYTLA*RLVCLS Trigger: GCTCAAGCAGACCAAGCGCAATGCCAAGGTGTACGA...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCAACCTTGGCATTGCGCTaGGTCTGCTTGAGCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SRTLSLGGPRDRTAWHLATLALR*VCLSSS Trigger: TGATGAGCTCAAGCAGACCAAGCGCAATGCCAAGGT...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCAATCTTCTCGTACACCTaGGCATTGCGCTTGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRTLSLGGPRDRTAWHLAIFSYT*ALRLVC Trigger: GCAGACCAAGCGCAATGCCAAGGTGTACGAGAAGAT...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS GCA 90 bp | CTCATCAAAGAACTCCTCCCAGACCAGCATGAGGCCGCGCATCTCTaGATCTGTCCAGTTGCGGGCCCTCCGATGCTTCTCCGTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LIKELLPDQHEAAHL*ICPVAGPPMLLRLR Trigger: CCTCAGACGGAGAAGCATCGGAGGGCCCGCAACTGGACAGATGCAGAGATGCGCGGCCTCATGCTGGTCTGGGAGGAGTTCTTTGATGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS CCA 90 bp | GCTGCTGGCCATCCGGCAGTTTGCCCTCACAGGACTCAGGGACCTTaGCCAGAATCCTATCAATGGCTAGGTAATAGGGCCAGTCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AAGHPAVCPHRTQGP*PESYQWLGNRASPA Trigger: CGCCGGACTGGCCCTATTACCTAGCCATTGATAGGATTCTGGCCAAGGTCCCTGAGTCCTGTGAGGGCAAACTGCCGGATGGCCAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS CCA 90 bp | ATGTCTCCTCCATGGCACGGCTCAGCCGGCGCTGTTCCTCCAGCATaGCCTCCAGCAGTCGCAGCTTCTTTTTCTGTAGGTGACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MSPPWHGSAGAVPPA*PPAVAASFSVGDSS Trigger: GGAGCTGTCACCTACAGAAAAAGAAGCTGCGACTGCTGGAGGCCATGCTGGAGGAACAGCGCCGGCTGAGCCGTGCCATGGAGGAGACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCATTGCGCTTGGTCTGCTaGAGCTCATCAAAGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRTLSLGGPRDRTAWHLALRLVC*SSSKNS Trigger: GGAGTTCTTTGATGAGCTCAAGCAGACCAAGCGCAA...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCAGTCATCTCAAAGAGCTaGCTGGCCATCTTCTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SRTLSLGGPRDRTAWHLAVISKS*LAIFSY Trigger: GTACGAGAAGATGGCCAGCAAGCTCTTTGAGATGAC...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCATTGGTGATTTTGATCTaGATCTCCTCGCCTAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SRTLSLGGPRDRTAWHLALVILI*ISSPSR Trigger: ACGGCTAGGCGAGGAGATCAAGATCAAAATCACCAA...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCATCGGCTGCTGCCATGTaGGAGGCACCTGCAGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VSQCHWSPRKPFREAQRPSAAAM*EAPAGL Trigger: TAACCCTGCAGGTGCCTCCAACATGGCAGCAGCCGA...TGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCAGTCATGTTGGTGATTTaGATCTTGATCTCCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRTLSLGGPRDRTAWHLAVMLVI*ILISSP Trigger: AGGCGAGGAGATCAAGATCAAAATCACCAACATGAC...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS CCA 90 bp | GTTTGCCCTCACAGGACTCAGGGACCTTGGCCAGAATCCTATCAATaGCTAGGTAATAGGGCCAGTCCGGCGGGATGGACTCGCTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VCPHRTQGPWPESYQ*LGNRASPAGWTRYL Trigger: CAGATAGCGAGTCCATCCCGCCGGACTGGCCCTATTACCTAGCCATTGATAGGATTCTGGCCAAGGTCCCTGAGTCCTGTGAGGGCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS GCA 90 bp | AGCTTGCTGGCCATCTTCTCGTACACCTTGGCATTGCGCTTGGTCTaGTTGAGCTCATCAAAGAACTCCTCCCAGACCAGCATGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SLLAIFSYTLALRLV*LSSSKNSSQTSMRP Trigger: CGGCCTCATGCTGGTCTGGGAGGAGTTCTTTGATGAGCTCAAGCAGACCAAGCGCAATGCCAAGGTGTACGAGAAGATGGCCAGCAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCATCGTACACCTTGGCATaGCGCTTGGTCTGCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSQCHWSPRKPFREAQRPSYTLA*RLVCLS Trigger: GCTCAAGCAGACCAAGCGCAATGCCAAGGTGTACGA...TGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAACTCTGAGCCTGGGTGGGCCTCGGGATAGGACGGCGTGGCACCTGGCATACTGGAAGGTCATGTaGGTGATTTTGATCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: SRTLSLGGPRDRTAWHLAYWKVM*VILILI Trigger: GATCAAGATCAAAATCACCAACATGACCTTCCAGTA...TGCCAGGTGCCACGCCGTCCTATCCCGAGGCCCACCCAGGCTCAGAGTTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS GCA 90 bp | CCAGCAGTCGCAGCTTCTTTTTCTGTAGGTGACAGCTCCGCATCTTaGGTTTCTTCACGGGGCGTTCCTCTGACCTGTACTGGAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PAVAASFSVGDSSAS*VSSRGVPLTCTGRS Trigger: TGACCTTCCAGTACAGGTCAGAGGAACGCCCCGTGAAGAAACGCAAGATGCGGAGCTGTCACCTACAGAAAAAGAAGCTGCGACTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202205.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCCAATGCCACTGGAGTCCTAGAAAGCCCTTCAGAGAAGCACAGAGGCCAGACCTTGGCATTGCGCTaGGTCTGCTTGAGCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SPNATGVLESPSEKHRGQTLALR*VCLSSS Trigger: TGATGAGCTCAAGCAGACCAAGCGCAATGCCAAGGT...CTGGCCTCTGTGCTTCTCTGAAGGGCTTTCTAGGACTCCAGTGGCATTGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS CCA 90 bp | CTCCGCATCTTGCGTTTCTTCACGGGGCGTTCCTCTGACCTGTACTaGAAGGTCATGTTGGTGATTTTGATCTTGATCTCCTCGCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRILRFFTGRSSDLY*KVMLVILILISSPS Trigger: GCTAGGCGAGGAGATCAAGATCAAAATCACCAACATGACCTTCCAGTACAGGTCAGAGGAACGCCCCGTGAAGAAACGCAAGATGCGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202205.2 |
||
| CDS-3UTR CAA 90 bp | ATACTGGAGAGTGGCTTCTGGGACCTTCTCACTACCTGTCGTCTTGGAGTCCCTGTCATGTTGGTGATTTaGATCTTGATCTCCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ILESGFWDLLTTCRLGVPVMLVI*ILISSP Trigger: AGGCGAGGAGATCAAGATCAAAATCACCAACATGAC...AGGGACTCCAAGACGACAGGTAGTGAGAAGGTCCCAGAAGCCACTCTCCAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050535.2 |
||
| CDS CCA 72 bp | GTGGACTTAGCAGACGGCGACAGGGACGCCTCGGTCTaGGACGTAGAGGGCCCCGGCTGCTGGCCATCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: VDLADGDRDASV*DVEGPGCWPSG Trigger: GCCGGATGGCCAGCAGCCGGGGCCCTCTACGTCCCAGACCGAGGCGTCCCTGTCGCCGTCTGCTAAGTCCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS CCA 72 bp | GACGCCTCGGTCTGGGACGTAGAGGGCCCCGGCTGCTaGCCATCCGGCAGTTTGCCCTCACAGGACTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DASVWDVEGPGC*PSGSLPSQDSG Trigger: CCCTGAGTCCTGTGAGGGCAAACTGCCGGATGGCCAGCAGCCGGGGCCCTCTACGTCCCAGACCGAGGCGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS GCA 72 bp | AGGGACGCCTCGGTCTGGGACGTAGAGGGCCCCGGCTaGTGGCCATCCGGCAGTTTGCCCTCACAGGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: RDASVWDVEGPG*WPSGSLPSQDS Trigger: TGAGTCCTGTGAGGGCAAACTGCCGGATGGCCAGCAGCCGGGGCCCTCTACGTCCCAGACCGAGGCGTCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS CCA 72 bp | CCAGCACACGGCGCACCTCTCGGCATGTCTCCTCCATaGCACGGCTCAGCCGGCGCTGTTCCTCCAGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: PAHGAPLGMSPP*HGSAGAVPPAW Trigger: CCATGCTGGAGGAACAGCGCCGGCTGAGCCGTGCCATGGAGGAGACATGCCGAGAGGTGCGCCGTGTGCTGG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS GCA 72 bp | GCCAGGCACTTCGGCTGCTGCCATGTTGGAGGCACCTaGAGGGTTAAGGATGGCACTCAGGCAGGGCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ARHFGCCHVGGT*RVKDGTQAGPQ Trigger: CTGAGGCCCTGCCTGAGTGCCATCCTTAACCCTGCAGGTGCCTCCAACATGGCAGCAGCCGAAGTGCCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS CAA 90 bp | TCGGTCTGGGACGTAGAGGGCCCCGGCTGCTGGCCATCCGGCAGTTaGCCCTCACAGGACTCAGGGACCTTGGCCAGAATCCTATCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SVWDVEGPGCWPSGS*PSQDSGTLARILSM Trigger: CATTGATAGGATTCTGGCCAAGGTCCCTGAGTCCTGTGAGGGCAAACTGCCGGATGGCCAGCAGCCGGGGCCCTCTACGTCCCAGACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS GCA 72 bp | GAACTCCTCCCAGACCAGCATGAGGCCGCGCATCTCTaGATCTGTCCAGTTGCGGGCCCTCCGATGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELLPDQHEAAHL*ICPVAGPPMLL Trigger: GAGAAGCATCGGAGGGCCCGCAACTGGACAGATGCAGAGATGCGCGGCCTCATGCTGGTCTGGGAGGAGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS GCA 72 bp | CTGAGGAGACACAAGGTAGCCAGGCACTTCGGCTGCTaGCATGTTGGAGGCACCTGCAGGGTTAAGGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRRHKVARHFGC*HVGGTCRVKDG Trigger: GCCATCCTTAACCCTGCAGGTGCCTCCAACATGGCAGCAGCCGAAGTGCCTGGCTACCTTGTGTCTCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS GCA 72 bp | CGTCTGAGGAGACACAAGGTAGCCAGGCACTTCGGCTaGTGCCATGTTGGAGGCACCTGCAGGGTTAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RLRRHKVARHFG*CHVGGTCRVKD Trigger: ATCCTTAACCCTGCAGGTGCCTCCAACATGGCAGCAGCCGAAGTGCCTGGCTACCTTGTGTCTCCTCAGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 |
||
| CDS GCA 72 bp | CGTCTGAGGAGACACAAGGTAGCCAGGCACTTCGGCTaGTGCCATGTTGGAGGCACCTTGACACAGCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RLRRHKVARHFG*CHVGGTLTQLH Trigger: ATGCAGCTGTGTCAAGGTGCCTCCAACATGGCAGCAGCCGAAGTGCCTGGCTACCTTGTGTCTCCTCAGACG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212362.2 |
||
| CDS CAA 72 bp | TCGCCTAGCCGTCGCTCCCCAGTCATCTCAAAGAGCTaGCTGGCCATCTTCTCGTACACCTTGGCATTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SPSRRSPVISKS*LAIFSYTLALR Trigger: GCGCAATGCCAAGGTGTACGAGAAGATGGCCAGCAAGCTCTTTGAGATGACTGGGGAGCGACGGCTAGGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS CAA 90 bp | TTGCTGGCCATCTTCTCGTACACCTTGGCATTGCGCTTGGTCTGCTaGAGCTCATCAAAGAACTCCTCCCAGACCAGCATGAGGCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LLAIFSYTLALRLVC*SSSKNSSQTSMRPR Trigger: GCGCGGCCTCATGCTGGTCTGGGAGGAGTTCTTTGATGAGCTCAAGCAGACCAAGCGCAATGCCAAGGTGTACGAGAAGATGGCCAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS CAA 90 bp | TTGATCTCCTCGCCTAGCCGTCGCTCCCCAGTCATCTCAAAGAGCTaGCTGGCCATCTTCTCGTACACCTTGGCATTGCGCTTGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LISSPSRRSPVISKS*LAIFSYTLALRLVC Trigger: GCAGACCAAGCGCAATGCCAAGGTGTACGAGAAGATGGCCAGCAAGCTCTTTGAGATGACTGGGGAGCGACGGCTAGGCGAGGAGATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS CCA 72 bp | CTAGCCGTCGCTCCCCAGTCATCTCAAAGAGCTTGCTaGCCATCTTCTCGTACACCTTGGCATTGCGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LAVAPQSSQRAC*PSSRTPWHCAW Trigger: CCAAGCGCAATGCCAAGGTGTACGAGAAGATGGCCAGCAAGCTCTTTGAGATGACTGGGGAGCGACGGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS CCA 72 bp | CATCCGGCAGTTTGCCCTCACAGGACTCAGGGACCTTaGCCAGAATCCTATCAATGGCTAGGTAATAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HPAVCPHRTQGP*PESYQWLGNRA Trigger: GGCCCTATTACCTAGCCATTGATAGGATTCTGGCCAAGGTCCCTGAGTCCTGTGAGGGCAAACTGCCGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS CAA 90 bp | ACGGGGCGTTCCTCTGACCTGTACTGGAAGGTCATGTTGGTGATTTaGATCTTGATCTCCTCGCCTAGCCGTCGCTCCCCAGTCATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TGRSSDLYWKVMLVI*ILISSPSRRSPVIS Trigger: TGAGATGACTGGGGAGCGACGGCTAGGCGAGGAGATCAAGATCAAAATCACCAACATGACCTTCCAGTACAGGTCAGAGGAACGCCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202205.2 |
||
| CDS GCA 72 bp | GCAGCTTCTTTTTCTGTAGGTGACAGCTCCGCATCTTaGGTTTCTTCACGGGGCGTTCCTCTGACCTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: AASFSVGDSSAS*VSSRGVPLTCT Trigger: AGTACAGGTCAGAGGAACGCCCCGTGAAGAAACGCAAGATGCGGAGCTGTCACCTACAGAAAAAGAAGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202205.2 |
||
| CDS CAA 72 bp | TTGCTGGCCATCTTCTCGTACACCTTGGCATTGCGCTaGGTCTGCTTGAGCTCATCAAAGAACTCCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLAIFSYTLALR*VCLSSSKNSSQ Trigger: CTGGGAGGAGTTCTTTGATGAGCTCAAGCAGACCAAGCGCAATGCCAAGGTGTACGAGAAGATGGCCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS CAA 72 bp | GACCTGTACTGGAAGGTCATGTTGGTGATTTTGATCTaGATCTCCTCGCCTAGCCGTCGCTCCCCAGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: DLYWKVMLVILI*ISSPSRRSPVI Trigger: GATGACTGGGGAGCGACGGCTAGGCGAGGAGATCAAGATCAAAATCACCAACATGACCTTCCAGTACAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202205.2 |
||
| CDS CAA 90 bp | TCAAAGAGCTTGCTGGCCATCTTCTCGTACACCTTGGCATTGCGCTaGGTCTGCTTGAGCTCATCAAAGAACTCCTCCCAGACCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SKSLLAIFSYTLALR*VCLSSSKNSSQTSM Trigger: CATGCTGGTCTGGGAGGAGTTCTTTGATGAGCTCAAGCAGACCAAGCGCAATGCCAAGGTGTACGAGAAGATGGCCAGCAAGCTCTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS CAA 90 bp | GTCATCTCAAAGAGCTTGCTGGCCATCTTCTCGTACACCTTGGCATaGCGCTTGGTCTGCTTGAGCTCATCAAAGAACTCCTCCCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: VISKSLLAIFSYTLA*RLVCLSSSKNSSQT Trigger: GGTCTGGGAGGAGTTCTTTGATGAGCTCAAGCAGACCAAGCGCAATGCCAAGGTGTACGAGAAGATGGCCAGCAAGCTCTTTGAGATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS CAA 90 bp | TCCCCAGTCATCTCAAAGAGCTTGCTGGCCATCTTCTCGTACACCTaGGCATTGCGCTTGGTCTGCTTGAGCTCATCAAAGAACTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPVISKSLLAIFSYT*ALRLVCLSSSKNSS Trigger: GGAGGAGTTCTTTGATGAGCTCAAGCAGACCAAGCGCAATGCCAAGGTGTACGAGAAGATGGCCAGCAAGCTCTTTGAGATGACTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS CAA 90 bp | CGTTCCTCTGACCTGTACTGGAAGGTCATGTTGGTGATTTTGATCTaGATCTCCTCGCCTAGCCGTCGCTCCCCAGTCATCTCAAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSDLYWKVMLVILI*ISSPSRRSPVISKS Trigger: GCTCTTTGAGATGACTGGGGAGCGACGGCTAGGCGAGGAGATCAAGATCAAAATCACCAACATGACCTTCCAGTACAGGTCAGAGGAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202205.2 |
||
| CDS TCA 72 bp | GCTCCGCATCTTGCGTTTCTTCACGGGGCGTTCCTCTaGCCTGTACTGGAAGGTCATGTTGGTGATTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: APHLAFLHGAFL*PVLEGHVGDFD Trigger: ATCAAAATCACCAACATGACCTTCCAGTACAGGTCAGAGGAACGCCCCGTGAAGAAACGCAAGATGCGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202205.2 |
||
| CDS GCA 72 bp | AGGGCCAGTCCGGCGGGATGGACTCGCTATCTGTCATaGATTTTAATTTCCTGTACTGGAAGGTCATGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RASPAGWTRYLS*ILISCTGRSCW Trigger: CCAACATGACCTTCCAGTACAGGAAATTAAAATGCATGACAGATAGCGAGTCCATCCCGCCGGACTGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS CAA 72 bp | AAGAGCTTGCTGGCCATCTTCTCGTACACCTTGGCATaGCGCTTGGTCTGCTTGAGCTCATCAAAGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: KSLLAIFSYTLA*RLVCLSSSKNS Trigger: GGAGTTCTTTGATGAGCTCAAGCAGACCAAGCGCAATGCCAAGGTGTACGAGAAGATGGCCAGCAAGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS CAA 72 bp | TTCCTGTACTGGAAGGTCATGTTGGTGATTTTGATCTaGATCTCCTCGCCTAGCCGTCGCTCCCCAGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: FLYWKVMLVILI*ISSPSRRSPVI Trigger: GATGACTGGGGAGCGACGGCTAGGCGAGGAGATCAAGATCAAAATCACCAACATGACCTTCCAGTACAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS CAA 72 bp | ATCTCAAAGAGCTTGCTGGCCATCTTCTCGTACACCTaGGCATTGCGCTTGGTCTGCTTGAGCTCATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ISKSLLAIFSYT*ALRLVCLSSSK Trigger: CTTTGATGAGCTCAAGCAGACCAAGCGCAATGCCAAGGTGTACGAGAAGATGGCCAGCAAGCTCTTTGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050535.2 ENSMUST00000202205.2 ENSMUST00000212362.2 |
||
| CDS CCA 72 bp | TTGCGTTTCTTCACGGGGCGTTCCTCTGACCTGTACTaGAAGGTCATGTTGGTGATTTTGATCTTGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRFFTGRSSDLY*KVMLVILILIS Trigger: GGAGATCAAGATCAAAATCACCAACATGACCTTCCAGTACAGGTCAGAGGAACGCCCCGTGAAGAAACGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202205.2 |
||
| CDS CAA 90 bp | GTCATGCATTTTAATTTCCTGTACTGGAAGGTCATGTTGGTGATTTaGATCTTGATCTCCTCGCCTAGCCGTCGCTCCCCAGTCATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VMHFNFLYWKVMLVI*ILISSPSRRSPVIS Trigger: TGAGATGACTGGGGAGCGACGGCTAGGCGAGGAGATCAAGATCAAAATCACCAACATGACCTTCCAGTACAGGAAATTAAAATGCATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||
| CDS CCA 72 bp | TATCAATGGCTAGGTAATAGGGCCAGTCCGGCGGGATaGACTCGCTATCTGTCATGCATTTTAATTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: YQWLGNRASPAG*TRYLSCILISC Trigger: ACAGGAAATTAAAATGCATGACAGATAGCGAGTCCATCCCGCCGGACTGGCCCTATTACCTAGCCATTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050535.2 ENSMUST00000212362.2 |
||