Pregenerated sensors for MS4A7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024672Ensembl transcript IDs: ENSMUST00000025574.11, ENSMUST00000056035.9, ENSMUST00000067532.11, ENSMUST00000159269.2
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGGATTGTGCAAGCAATGCAGAGAAAGACCTTACCTAGCCACATaGCCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCAT | + |
|
Preference number: 1 (lower is better) Translates to: KGLCKQCRERPYLAT*PCQLPPQKEYMLSH Trigger: ATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCTAGGTAAGGTCTTTCTCTGCATTGCTTGCACAATCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| 3UTR-3UTR TCA 90 bp | CCTAGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCACTAGCATCAGACAGATaGAACACTGTCTGTTCACTC | + |
|
Preference number: 2 (lower is better) Translates to: PSHMTLSASTPEGVHAFSLASDR*NTVCSL Trigger: GAGTGAACAGACAGTGTTTCATCTGTCTGATGCTAG...TGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| 3UTR-3UTR TCA 90 bp | CCTAGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCAAGCTGTACTCTGCTGTaGGCAACAGATTTCTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PSHMTLSASTPEGVHAFSSCTLL*ATDFFF Trigger: AAAGAAGAAATCTGTTGCTCACAGCAGAGTACAGCT...TGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| 3UTR-3UTR TCA 90 bp | CCTAGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCAAATGAAGTGACTCATTaGAAGTATGACAGGAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PSHMTLSASTPEGVHAFSNEVTH*KYDRRA Trigger: AGCTCTCCTGTCATACTTTCAATGAGTCACTTCATT...TGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| 3UTR-3UTR CCA 90 bp | CACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCGGTCATTGTGGAATGTaGAATCAGGGAATTTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: HMTLSASTPEGVHAFSSSGHCGM*NQGILL Trigger: CAGCAAAATTCCCTGATTCCACATTCCACAATGACC...GCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| 3UTR-3UTR TCA 90 bp | AGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAATGAAGTGACTCATTaGAAGTATGACAGGAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SHMTLSASTPEGVHAFSSNEVTH*KYDRRA Trigger: AGCTCTCCTGTCATACTTTCAATGAGTCACTTCATT...AGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| 3UTR-3UTR CCA 90 bp | CACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCAGTTTGTGGTCATTGTaGAATGTGGAATCAGGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: HMTLSASTPEGVHAFSSSSLWSL*NVESGN Trigger: ATTCCCTGATTCCACATTCCACAATGACCACAAACT...GCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| 3UTR-3UTR CCA 90 bp | TCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCATCAGACAGATGAAACACAGTTTGTGGTCATTGTaGAATGTGGAATCAGGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: STPEGVHAFSSSIRQMKHSLWSL*NVESGN Trigger: ATTCCCTGATTCCACATTCCACAATGACCACAAACT...GTGTTTCATCTGTCTGATGCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| 3UTR-3UTR TCA 90 bp | CACTGTCTGTTCACTCTATTTGGGGAAGTTGATAAAGTTTGTGGTCATTGTGGAAGCTGTACTCTGCTGTaGGCAACAGATTTCTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: HCLFTLFGEVDKVCGHCGSCTLL*ATDFFF Trigger: AAAGAAGAAATCTGTTGCTCACAGCAGAGTACAGCT...TCCACAATGACCACAAACTTTATCAACTTCCCCAAATAGAGTGAACAGACAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| 3UTR TCA 72 bp | TGCAAGCAATGCAGAGAAAGACCTTACCTAGCCACATaGCCCTGTCAGCTTCCACCCCAGAAGGAGTACATG | + |
|
Preference number: 3 (lower is better) Translates to: CKQCRERPYLAT*PCQLPPQKEYM Trigger: CATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCTAGGTAAGGTCTTTCTCTGCATTGCTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| 3UTR GCA 72 bp | CCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTACTCTaGTGTGAGCAACAGATTTCTTCTTTCTTCTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PKLRFQASLAVL*CEQQISSFFFC Trigger: ACAAAAGAAGAAAGAAGAAATCTGTTGCTCACAGCAGAGTACAGCTAGACTTGCCTGAAATCTCAGCTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 ENSMUST00000159269.2 |
||
| CDS-3UTR GCA 90 bp | AGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTCATTGGAGGCCAGGCTaGTCAGTGCAAAGGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHMTLSASTPEGVHAFSSHWRPG*SVQRVW Trigger: CCAAACCCTTTGCACTGAGCAGCCTGGCCTCCAATG...AGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCATCAGACCAGAGCTTGCTACATTaGAGGCCAGGCTGCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCQLPPQKEYMLSHLASDQSLLH*RPGCSV Trigger: CACTGAGCAGCCTGGCCTCCAATGTAGCAAGCTCTG...GTCTGATGCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR GCA 90 bp | AGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTGGCAACAACAGAGCTTaGTACATTGGAGGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHMTLSASTPEGVHAFSSGNNRA*YIGGQA Trigger: AGCCTGGCCTCCAATGTAGCAAGCTCTGTTGTTGCC...AGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CCA 90 bp | ACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCATCAGACAGAGCTTGCTACATTaGAGGCCAGGCTGCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSASTPEGVHAFSSSIRQSLLH*RPGCSV Trigger: CACTGAGCAGCCTGGCCTCCAATGTAGCAAGCTCTG...TCTGATGCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR TCA 90 bp | CACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCAAACCTCCAGCACAGTaGAGAGAAGCATCATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HMTLSASTPEGVHAFSSSKPPAQ*REASSP Trigger: TGGGGATGATGCTTCTCTTCACTGTGCTGGAGGTTT...GCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR TCA 90 bp | AGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTTGGAAACTTCTGGGTTaGAGTAGGAAGCTGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: SHMTLSASTPEGVHAFSSWKLLG*SRKLTP Trigger: TGGTGTCAGCTTCCTACTTCAACCCAGAAGTTTCCA...AGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR TCA 90 bp | ACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCATCAGAAAACCTCCAGCACAGTaGAGAGAAGCATCATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLSASTPEGVHAFSSSIRKPPAQ*REASSP Trigger: TGGGGATGATGCTTCTCTTCACTGTGCTGGAGGTTT...TCTGATGCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR GCA 90 bp | ACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCATCAGAAGATGGGGATGGCACTaGATTGGAAGCCAAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSASTPEGVHAFSSSIRRWGWH*IGSQML Trigger: CAACATTTGGCTTCCAATGCAGTGCCATCCCCATCT...TCTGATGCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025574.11 |
||
| CDS-3UTR CCA 90 bp | ACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCATCAGAGGGATGGCACTGCATTaGAAGCCAAATGTTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLSASTPEGVHAFSSSIRGMALH*KPNVGC Trigger: ACAACCAACATTTGGCTTCCAATGCAGTGCCATCCC...TCTGATGCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025574.11 |
||
| CDS-3UTR CCA 90 bp | CCTAGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCAGATAATGATGTCCTTTaGAAAGCAGTCCCACCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSHMTLSASTPEGVHAFSDNDVL*KAVPPN Trigger: ATTGGGTGGGACTGCTTTCCAAAGGACATCATTATC...TGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CCA 90 bp | CCTAGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCAAGAGAATTCCAGCAATaGCAAAACAGAGGGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PSHMTLSASTPEGVHAFSREFQQ*QNRGIQ Trigger: TTGGATCCCTCTGTTTTGCCATTGCTGGAATTCTCT...TGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CCA 90 bp | AGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTGATAATGATGTCCTTTaGAAAGCAGTCCCACCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SHMTLSASTPEGVHAFSSDNDVL*KAVPPN Trigger: ATTGGGTGGGACTGCTTTCCAAAGGACATCATTATC...AGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCATCAGACAGAGAATTCCAGCAATaGCAAAACAGAGGGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PCQLPPQKEYMLSHLASDREFQQ*QNRGIQ Trigger: TTGGATCCCTCTGTTTTGCCATTGCTGGAATTCTCT...GTCTGATGCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR GCA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTCATTGGAGGCCAGGCTaGTCAGTGCACAGAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: FRCLLGSTKAEISGKSSCHWRPG*SVHRGI Trigger: GATCCCTCTGTGCACTGAGCAGCCTGGCCTCCAATG...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056035.9 |
||
| CDS-3UTR TCA 90 bp | TGGTCATTGTGGAATGTGGAATCAGGGAATTTTGCTGACTCGGACTTTAGGAAATGCCAGGGATGCAAATaGACCCCGGATTCTTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: WSLWNVESGNFADSDFRKCQGCK*TPDSCY Trigger: GTAACAAGAATCCGGGGTTCATTTGCATCCCTGGCA...TTTCCTAAAGTCCGAGTCAGCAAAATTCCCTGATTCCACATTCCACAATGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025574.11 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTCAGAGCTTGCTACATTaGAGGCCAGGCTGCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRCLLGSTKAEISGKSSCQSLLH*RPGCSV Trigger: CACTGAGCAGCCTGGCCTCCAATGTAGCAAGCTCTG...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 ENSMUST00000159269.2 |
||
| CDS-3UTR GCA 90 bp | CACTGTCTGTTCACTCTATTTGGGGAAGTTGATAAAGTTTGTGGTCATTGTGGAACCCAATGTTCTTGGTaGCAAGCTGTAGACGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HCLFTLFGEVDKVCGHCGTQCSW*QAVDAW Trigger: CCATGCGTCTACAGCTTGGCACCAAGAACATTGGGT...TCCACAATGACCACAAACTTTATCAACTTCCCCAAATAGAGTGAACAGACAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025574.11 |
||
| CDS-3UTR GCA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTGGCAACAACAGAGCTTaGTACATTGGAGGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRCLLGSTKAEISGKSSCGNNRA*YIGGQA Trigger: AGCCTGGCCTCCAATGTAGCAAGCTCTGTTGTTGCC...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 ENSMUST00000159269.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTATCCCCAGAGCACTCTaGAAAGCAGCACAGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: FRCLLGSTKAEISGKSSCIPRAL*KAAQAI Trigger: TATGGCCTGTGCTGCTTTGCAGAGTGCTCTGGGGAT...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159269.2 |
||
| CDS-3UTR CCA 90 bp | CACTGTCTGTTCACTCTATTTGGGGAAGTTGATAAAGTTTGTGGTCATTGTGGATACCCCCAGGTTTGTTaGAGTAGACTTGCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HCLFTLFGEVDKVCGHCGYPQVC*SRLAST Trigger: GGTGGAAGCAAGTCTACTCCAACAAACCTGGGGGTA...TCCACAATGACCACAAACTTTATCAACTTCCCCAAATAGAGTGAACAGACAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR TCA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTAAACCTCCAGCACAGTaGAGAGAAGCATCATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FRCLLGSTKAEISGKSSCKPPAQ*REASSP Trigger: TGGGGATGATGCTTCTCTTCACTGTGCTGGAGGTTT...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 ENSMUST00000159269.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTTACCCCCAGGTTTGTTaGAGTAGACTTGCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FRCLLGSTKAEISGKSSCYPQVC*SRLAST Trigger: GGTGGAAGCAAGTCTACTCCAACAAACCTGGGGGTA...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 ENSMUST00000159269.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTTGGAAACTTCTGGGTTaGAGTAGGAAGCTGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: FRCLLGSTKAEISGKSSCWKLLG*SRKLTP Trigger: TGGTGTCAGCTTCCTACTTCAACCCAGAAGTTTCCA...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 |
||
| CDS-3UTR CCA 90 bp | CACTGTCTGTTCACTCTATTTGGGGAAGTTGATAAAGTTTGTGGTCATTGTGGACACATAGTAGCTGGATaGTTCCAAGAACTGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HCLFTLFGEVDKVCGHCGHIVAG*FQELWL Trigger: AAGCCACAGTTCTTGGAACCATCCAGCTACTATGTG...TCCACAATGACCACAAACTTTATCAACTTCCCCAAATAGAGTGAACAGACAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTAGGGCACATAGTAGCTaGATGGTTCCAAGAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRCLLGSTKAEISGKSSCRAHSS*MVPRTV Trigger: CACAGTTCTTGGAACCATCCAGCTACTATGTGCCCT...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 |
||
| CDS-3UTR TCA 90 bp | CTTTTCTTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTTGGAAACTTCTGGGTTaGAGTAGGAAGCTGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LFFRCLLGSTKAEISGKSWKLLG*SRKLTP Trigger: TGGTGTCAGCTTCCTACTTCAACCCAGAAGTTTCCA...AGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAAGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR TCA 90 bp | CACTGTCTGTTCACTCTATTTGGGGAAGTTGATAAAGTTTGTGGTCATTGTGGACAGGAATTTCTTTTCTaGGTTACAGTGTGGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HCLFTLFGEVDKVCGHCGQEFLF*VTVWES Trigger: GCTTTCCCACACTGTAACTCAGAAAAGAAATTCCTG...TCCACAATGACCACAAACTTTATCAACTTCCCCAAATAGAGTGAACAGACAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR GCA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTAAGCTGACACCAAAATaGCCCCAAAGCTTGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FRCLLGSTKAEISGKSSCKLTPK*PQSLQV Trigger: TACTTGCAAGCTTTGGGGGCATTTTGGTGTCAGCTT...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 |
||
| CDS-3UTR CCA 90 bp | CTTTTCTTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGGGCACATAGTAGCTaGATGGTTCCAAGAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFFRCLLGSTKAEISGKSRAHSS*MVPRTV Trigger: CACAGTTCTTGGAACCATCCAGCTACTATGTGCCCT...AGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAAGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR GCA 90 bp | CTTTTCTTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAAGCTGACACCAAAATaGCCCCAAAGCTTGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFFRCLLGSTKAEISGKSKLTPK*PQSLQV Trigger: TACTTGCAAGCTTTGGGGGCATTTTGGTGTCAGCTT...AGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAAGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTGATAATGATGTCCTTTaGAAAGCAGTCCCACCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FRCLLGSTKAEISGKSSCDNDVL*KAVPPN Trigger: ATTGGGTGGGACTGCTTTCCAAAGGACATCATTATC...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 |
||
| 3UTR CAA 72 bp | GTTTGTGGTCATTGTGGAATGTGGAATCAGGGAATTTaGCTGACTCGGACTTTAGGAAATGATTTTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VCGHCGMWNQGI*LTRTLGNDFQW Trigger: CCATTGAAAATCATTTCCTAAAGTCCGAGTCAGCAAAATTCCCTGATTCCACATTCCACAATGACCACAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CAA 90 bp | CCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCATCAGACTCCCACCCAATGTTCTaGGTGCCAAGCTGTAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: PCQLPPQKEYMLSHLASDSHPMF*VPSCRR Trigger: GCGTCTACAGCTTGGCACCAAGAACATTGGGTGGGA...GTCTGATGCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CAA 90 bp | AGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTGGGGATGGCACTGCATaGGAAGCCAAATGTTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SHMTLSASTPEGVHAFSSGDGTA*EAKCWL Trigger: CAACCAACATTTGGCTTCCAATGCAGTGCCATCCCC...AGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025574.11 |
||
| CDS-3UTR CAA 90 bp | AGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTATGAACCCCGGATTCTaGTTACCAGTGGGGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SHMTLSASTPEGVHAFSSMNPGF*LPVGQM Trigger: CATCTGCCCCACTGGTAACAAGAATCCGGGGTTCAT...AGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025574.11 |
||
| CDS-3UTR CAA 90 bp | ACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCATCAGAACAGAGCTTGCTACATaGGAGGCCAGGCTGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLSASTPEGVHAFSSSIRTELAT*EARLLS Trigger: ACTGAGCAGCCTGGCCTCCAATGTAGCAAGCTCTGT...TCTGATGCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CAA 90 bp | CCTAGCCACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATTTGTTGGAGTAGACTaGCTTCCACCAAAAGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: PSHMTLSASTPEGVHAFSFVGVD*LPPKDR Trigger: TCTATCTTTTGGTGGAAGCAAGTCTACTCCAACAAA...TGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTGGCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CAA 90 bp | CACTGTCTGTTCACTCTATTTGGGGAAGTTGATAAAGTTTGTGGTCATTGTGGAACAGAGCTTGCTACATaGGAGGCCAGGCTGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HCLFTLFGEVDKVCGHCGTELAT*EARLLS Trigger: ACTGAGCAGCCTGGCCTCCAATGTAGCAAGCTCTGT...TCCACAATGACCACAAACTTTATCAACTTCCCCAAATAGAGTGAACAGACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CAA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTTCCCACCCAATGTTCTaGGTGCCAAGCTGTAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: FRCLLGSTKAEISGKSSCSHPMF*VPSCRR Trigger: GCGTCTACAGCTTGGCACCAAGAACATTGGGTGGGA...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 |
||
| CDS-3UTR CAA 90 bp | CACATGACCCTGTCAGCTTCCACCCCAGAAGGAGTACATGCTTTCTCATCTAGCCCAGTTTTCTCTCTTTaGTGGATAATGATGTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HMTLSASTPEGVHAFSSSPVFSL*WIMMSF Trigger: AAAGGACATCATTATCCACAAAAGAGAGAAAACTGG...GCTAGATGAGAAAGCATGTACTCCTTCTGGGGTGGAAGCTGACAGGGTCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CAA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTACAGAGCTTGCTACATaGGAGGCCAGGCTGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FRCLLGSTKAEISGKSSCTELAT*EARLLS Trigger: ACTGAGCAGCCTGGCCTCCAATGTAGCAAGCTCTGT...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 ENSMUST00000159269.2 |
||
| CDS-3UTR CAA 90 bp | CACTGTCTGTTCACTCTATTTGGGGAAGTTGATAAAGTTTGTGGTCATTGTGGATTTGTTGGAGTAGACTaGCTTCCACCAAAAGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: HCLFTLFGEVDKVCGHCGFVGVD*LPPKDR Trigger: TCTATCTTTTGGTGGAAGCAAGTCTACTCCAACAAA...TCCACAATGACCACAAACTTTATCAACTTCCCCAAATAGAGTGAACAGACAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS-3UTR CAA 90 bp | TTCAGATGTTTATTAGGATCTACCAAAGCTGAGATTTCAGGCAAGTCTAGCTGTTTTGTTGGAGTAGACTaGCTTCCACCAAAAGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: FRCLLGSTKAEISGKSSCFVGVD*LPPKDR Trigger: TCTATCTTTTGGTGGAAGCAAGTCTACTCCAACAAA...ACAGCTAGACTTGCCTGAAATCTCAGCTTTGGTAGATCCTAATAAACATCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 ENSMUST00000159269.2 |
||
| CDS TCA 72 bp | TGCCAAGCTGTAGACGCATGGTGCCAGGGATGCAAATaGACCCCGGATTCTTGTTACCAGTGGGGCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: CQAVDAWCQGCK*TPDSCYQWGRW Trigger: CCATCTGCCCCACTGGTAACAAGAATCCGGGGTTCATTTGCATCCCTGGCACCATGCGTCTACAGCTTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025574.11 |
||
| CDS CAA 72 bp | AAGAGGCCAATGACGGCAACAACAGAGCTTGCTACATaGGAGGCCAGGCTGCTCAGTGCACAGAGGGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: KRPMTATTELAT*EARLLSAQRDP Trigger: TGGATCCCTCTGTGCACTGAGCAGCCTGGCCTCCAATGTAGCAAGCTCTGTTGTTGCCGTCATTGGCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056035.9 |
||
| CDS CAA 90 bp | GTGAAGAGGAAGAGGCCAATGACGGCAACAACAGAGCTTGCTACATaGGAGGCCAGGCTGCTCAGTGCACAGAGGGATCCAATAAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VKRKRPMTATTELAT*EARLLSAQRDPINR Trigger: CCTGTTTATTGGATCCCTCTGTGCACTGAGCAGCCTGGCCTCCAATGTAGCAAGCTCTGTTGTTGCCGTCATTGGCCTCTTCCTCTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056035.9 |
||
| CDS GCA 72 bp | TGTCCTTTGGAAAGCAGTCCCACCCAATGTTCTTGGTaGCAAGCTGTAGACGCATGGTGCCAGGGATGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: CPLESSPTQCSW*QAVDAWCQGCK Trigger: TTTGCATCCCTGGCACCATGCGTCTACAGCTTGGCACCAAGAACATTGGGTGGGACTGCTTTCCAAAGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025574.11 |
||
| CDS CAA 72 bp | ATGATGTCCTTTGGAAAGCAGTCCCACCCAATGTTCTaGGTGCCAAGCTGTAGACGCATGGTGCCAGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: MMSFGKQSHPMF*VPSCRRMVPGM Trigger: CATCCCTGGCACCATGCGTCTACAGCTTGGCACCAAGAACATTGGGTGGGACTGCTTTCCAAAGGACATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025574.11 |
||
| CDS CCA 72 bp | CCCCCAAAGCTTGCAAGTATCAGGGCACATAGTAGCTaGATGGTTCCAAGAACTGTGGCTTCACTAGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: PPKLASIRAHSS*MVPRTVASLGT Trigger: AGTGCCTAGTGAAGCCACAGTTCTTGGAACCATCCAGCTACTATGTGCCCTGATACTTGCAAGCTTTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 |
||
| CDS CAA 90 bp | GTGAAGAGGAAGAGGCCAATGACGGCAACAACAGAGCTTGCTACATaGGAGGCCAGGCTGCTCAGTGCAAAGGGTTTGGTTGAGATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VKRKRPMTATTELAT*EARLLSAKGLVEIF Trigger: AAAAATCTCAACCAAACCCTTTGCACTGAGCAGCCTGGCCTCCAATGTAGCAAGCTCTGTTGTTGCCGTCATTGGCCTCTTCCTCTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025574.11 ENSMUST00000067532.11 |
||
| CDS GCA 72 bp | GATTCTTGTTACCAGTGGGGCAGATGGGGATGGCACTaGATTGGAAGCCAAATGTTGGTTGTATCTGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: DSCYQWGRWGWH*IGSQMLVVSEA Trigger: TGCTTCAGATACAACCAACATTTGGCTTCCAATGCAGTGCCATCCCCATCTGCCCCACTGGTAACAAGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025574.11 |
||
| CDS GCA 72 bp | AACAGAGCTTGCTACATTGGAGGCCAGGCTGCTCAGTaGACAGAGGGATCCAATAAACAGGTATCCAGATAT | + |
|
Preference number: 6 (lower is better) Translates to: NRACYIGGQAAQ*TEGSNKQVSRY Trigger: ATATCTGGATACCTGTTTATTGGATCCCTCTGTGCACTGAGCAGCCTGGCCTCCAATGTAGCAAGCTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056035.9 |
||
| CDS TCA 72 bp | CAAAGTGGTGGAAACTTCTGGGTTGAAGTAGGAAGCTaGCACCAAAATGCCCCCAAAGCTTGCAAGTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: QSGGNFWVEVGS*HQNAPKACKYQ Trigger: CTGATACTTGCAAGCTTTGGGGGCATTTTGGTGTCAGCTTCCTACTTCAACCCAGAAGTTTCCACCACTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025574.11 ENSMUST00000056035.9 ENSMUST00000067532.11 |
||