Pregenerated sensors for MS4A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054523Ensembl transcript IDs: ENSMUST00000067673.13, ENSMUST00000186937.7, ENSMUST00000188267.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGAACTTACTGGGCTTTCATATCTTTATCCATTTTCCTGTTGTTaGTCTGTTATTGGTATCATGACTCGGTGTCAAATGCCCAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: NELTGLSYLYPFSCC*SVIGIMTRCQMPSV Trigger: GACACTGGGCATTTGACACCGAGTCATGATACCAATAACAGATCAACAACAGGAAAATGGATAAAGATATGAAAGCCCAGTAAGTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188267.2 |
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| 3UTR CCA 90 bp | TGGGCTTTCATATCTTTATCCATTTTCCTGTTGTTGATCTGTTATTaGTATCATGACTCGGTGTCAAATGCCCAGTGTCATCAGTTTATG | + |
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Preference number: 1 (lower is better) Translates to: WAFISLSIFLLLICY*YHDSVSNAQCHQFM Trigger: CATAAACTGATGACACTGGGCATTTGACACCGAGTCATGATACCAATAACAGATCAACAACAGGAAAATGGATAAAGATATGAAAGCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188267.2 |
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| 3UTR-3UTR TCA 90 bp | TTACACCAAGGTGATCACTCTATTGGAGGAGGAAATGCCATTATCAGGGAGAAGCAAAAAGGTCCCCTATaGGTCATTCCCAACCCATTT | + |
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Preference number: 2 (lower is better) Translates to: LHQGDHSIGGGNAIIREKQKGPL*VIPNPF Trigger: AAATGGGTTGGGAATGACTCATAGGGGACCTTTTTG...CTTCTCCCTGATAATGGCATTTCCTCCTCCAATAGAGTGATCACCTTGGTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| 3UTR-3UTR TCA 90 bp | TACACCAAGGTGATCACTCTATTGGAGGAGGAAATGCCATTATCAGGGAGAAGACAAAAAGGTCCCCTATaGGTCATTCCCAACCCATTT | + |
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Preference number: 2 (lower is better) Translates to: YTKVITLLEEEMPLSGRRQKGPL*VIPNPF Trigger: AAATGGGTTGGGAATGACTCATAGGGGACCTTTTTG...TCTTCTCCCTGATAATGGCATTTCCTCCTCCAATAGAGTGATCACCTTGGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| 3UTR-3UTR TCA 90 bp | TACACCAAGGTGATCACTCTATTGGAGGAGGAAATGCCATTATCAGGGAGAAGAAGCAGGACTGGCATCTaGGTTTTATCATTTTGCGTT | + |
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Preference number: 2 (lower is better) Translates to: YTKVITLLEEEMPLSGRRSRTGI*VLSFCV Trigger: AACGCAAAATGATAAAACTCAGATGCCAGTCCTGCT...TCTTCTCCCTGATAATGGCATTTCCTCCTCCAATAGAGTGATCACCTTGGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| 3UTR-3UTR TCA 90 bp | GTGATCACTCTATTGGAGGAGGAAATGCCATTATCAGGGAGAAGAATGTGTTTAAGCAGGACTGGCATCTaGGTTTTATCATTTTGCGTT | + |
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Preference number: 2 (lower is better) Translates to: VITLLEEEMPLSGRRMCLSRTGI*VLSFCV Trigger: AACGCAAAATGATAAAACTCAGATGCCAGTCCTGCT...TAAACACATTCTTCTCCCTGATAATGGCATTTCCTCCTCCAATAGAGTGATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| 3UTR CAA 90 bp | CCCATTTTCCCTCAAATAATTGTGAACTTTAAGTGTGTAAGTGTGTaGGCTCTTTCTCACAAGCAGGACTGGCATCTGAGTTTTATCATT | + |
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Preference number: 2 (lower is better) Translates to: PIFPQIIVNFKCVSV*ALSHKQDWHLSFII Trigger: AATGATAAAACTCAGATGCCAGTCCTGCTTGTGAGAAAGAGCCAACACACTTACACACTTAAAGTTCACAATTATTTGAGGGAAAATGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| 3UTR-3UTR CAA 90 bp | TTACACCAAGGTGATCACTCTATTGGAGGAGGAAATGCCATTATCAGGGAGAAGAAGTGTGTAAGTGTGTaGGCTCTTTCTCACAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LHQGDHSIGGGNAIIREKKCVSV*ALSHKQ Trigger: CTGCTTGTGAGAAAGAGCCAACACACTTACACACTT...CTTCTCCCTGATAATGGCATTTCCTCCTCCAATAGAGTGATCACCTTGGTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| 3UTR TCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGATTACACCAAGGTaGTCACTCTATTGGAGGAGGAAATGCCATTATCAG | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVITPR*SLYWRRKCHYQ Trigger: CTGATAATGGCATTTCCTCCTCCAATAGAGTGATCACCTTGGTGTAATCACACACACACACACACACACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| 3UTR TCA 72 bp | ACTGGGCTTTCATATCTTTATCCATTTTCCTGTTGTTaGTCTGTTATTGGTATCATGACTCGGTGTCAAATG | + |
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Preference number: 3 (lower is better) Translates to: TGLSYLYPFSCC*SVIGIMTRCQM Trigger: CATTTGACACCGAGTCATGATACCAATAACAGATCAACAACAGGAAAATGGATAAAGATATGAAAGCCCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188267.2 |
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| 3UTR CCA 72 bp | ATATCTTTATCCATTTTCCTGTTGTTGATCTGTTATTaGTATCATGACTCGGTGTCAAATGCCCAGTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: ISLSIFLLLICY*YHDSVSNAQCH Trigger: ATGACACTGGGCATTTGACACCGAGTCATGATACCAATAACAGATCAACAACAGGAAAATGGATAAAGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188267.2 |
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| CDS-3UTR GCA 90 bp | CATGCCACAATGAGCACAGGGTGTGTGTGTGTGTGTGTGTGTGTGATTACACCAGAGAATGATTCCAGCTaGTGCTCCCAGAGCACTAAG | + |
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Preference number: 4 (lower is better) Translates to: HATMSTGCVCVCVCVITPENDSS*CSQSTK Trigger: CTTAGTGCTCTGGGAGCAGCAGCTGGAATCATTCTC...TGGTGTAATCACACACACACACACACACACACACCCTGTGCTCATTGTGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| CDS-3UTR GCA 90 bp | GGAGGAAATGCCATTATCAGGGAGAAGAATGTGTTTAACCAGCCAAAAAGGTCCGAGAATGATTCCAGCTaGTGCTCCCAGAGCACTAAG | + |
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Preference number: 4 (lower is better) Translates to: GGNAIIREKNVFNQPKRSENDSS*CSQSTK Trigger: CTTAGTGCTCTGGGAGCAGCAGCTGGAATCATTCTC...GGACCTTTTTGGCTGGTTAAACACATTCTTCTCCCTGATAATGGCATTTCCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| CDS-3UTR CCA 90 bp | TGTGTTGGCTCTTTCTCACAAGCAGGACTGGCATCTGAGTTTTATCATTTTGCGTTGAGTGGTGACCTCTaGAGGGAACACCAGGAACAA | + |
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Preference number: 4 (lower is better) Translates to: CVGSFSQAGLASEFYHFALSGDL*REHQEQ Trigger: TTGTTCCTGGTGTTCCCTCCAGAGGTCACCACTCAA...CGCAAAATGATAAAACTCAGATGCCAGTCCTGCTTGTGAGAAAGAGCCAACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| CDS-3UTR CCA 90 bp | GAAATGCCATTATCAGGGAGAAGAATGTGTTTAACCAGCCAAAAAGGTCCCCTATTGAGTGGTGACCTCTaGAGGGAACACCAGGAACAA | + |
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Preference number: 4 (lower is better) Translates to: EMPLSGRRMCLTSQKGPLLSGDL*REHQEQ Trigger: TTGTTCCTGGTGTTCCCTCCAGAGGTCACCACTCAA...TAGGGGACCTTTTTGGCTGGTTAAACACATTCTTCTCCCTGATAATGGCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| CDS-3UTR TCA 90 bp | TGTGTTGGCTCTTTCTCACAAGCAGGACTGGCATCTGAGTTTTATCATTTTGCGGAGAATAGCCACAGATaGATTCCCCATCTAGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: CVGSFSQAGLASEFYHFAENSHR*IPHLEG Trigger: TCCTTCTAGATGGGGAATTCATCTGTGGCTATTCTC...CGCAAAATGATAAAACTCAGATGCCAGTCCTGCTTGTGAGAAAGAGCCAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| CDS-3UTR TCA 90 bp | GAAATGCCATTATCAGGGAGAAGAATGTGTTTAACCAGCCAAAAAGGTCCCCTAGTAGCATCCCAGAACTaGGGAAAAGAGGGAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: EMPLSGRRMCLTSQKGPLVASQN*GKEGNE Trigger: TTCATTTCCCTCTTTTCCTCAGTTCTGGGATGCTAC...TAGGGGACCTTTTTGGCTGGTTAAACACATTCTTCTCCCTGATAATGGCATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| CDS-3UTR CCA 90 bp | GGCCCCAGAGTTAATGAACTTACTGGGCTTTCATATCTTTATCCATTTTCCTGTATTCCAAACAGGATCTaGGTGGTCCCTAAGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: GPRVNELTGLSYLYPFSCIPNRI*VVPKIS Trigger: GGAGATCTTAGGGACCACCCAGATCCTGTTTGGAAT...ACAGGAAAATGGATAAAGATATGAAAGCCCAGTAAGTTCATTAACTCTGGGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188267.2 |
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| CDS-3UTR TCA 90 bp | GGAGGAAATGCCATTATCAGGGAGAAGAATGTGTTTAACCAGCCAAAAAGGTCCCAAATGAAAAGTTCATaGTTCCAAACAGGATCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GGNAIIREKNVFNQPKRSQMKSS*FQTGSG Trigger: CCCAGATCCTGTTTGGAATCATGAACTTTTCATTTG...GGACCTTTTTGGCTGGTTAAACACATTCTTCTCCCTGATAATGGCATTTCCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067673.13 |
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| CDS-3UTR TCA 90 bp | GATCACTCTATTGGAGGAGGAAATGCCATTATCAGGGAGAAGAATGTGTTTAACGAGAATAGCCACAGATaGATTCCCCATCTAGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: DHSIGGGNAIIREKNVFNENSHR*IPHLEG Trigger: TCCTTCTAGATGGGGAATTCATCTGTGGCTATTCTC...GTTAAACACATTCTTCTCCCTGATAATGGCATTTCCTCCTCCAATAGAGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| CDS-3UTR CCA 90 bp | GAAATGCCATTATCAGGGAGAAGAATGTGTTTAACCAGCCAAAAAGGTCCCCTAACACTGCATACCATCTaGAGAATAGCCACAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: EMPLSGRRMCLTSQKGPLTLHTI*RIATDE Trigger: TTCATCTGTGGCTATTCTCCAGATGGTATGCAGTGT...TAGGGGACCTTTTTGGCTGGTTAAACACATTCTTCTCCCTGATAATGGCATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| 3UTR CAA 72 bp | CCTCAAATAATTGTGAACTTTAAGTGTGTAAGTGTGTaGGCTCTTTCTCACAAGCAGGACTGGCATCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: PQIIVNFKCVSV*ALSHKQDWHLS Trigger: ACTCAGATGCCAGTCCTGCTTGTGAGAAAGAGCCAACACACTTACACACTTAAAGTTCACAATTATTTGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| CDS-3UTR CCA 90 bp | CTGGGCTTTCATATCTTTATCCATTTTCCTGTTGTTGATCTGTTATTGGTATCATTGAGTGGTGACCTCTaGAGGGAACACCAGGAACAA | + |
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Preference number: 4 (lower is better) Translates to: LGFHIFIHFPVVDLLLVSLSGDL*REHQEQ Trigger: TTGTTCCTGGTGTTCCCTCCAGAGGTCACCACTCAA...TGATACCAATAACAGATCAACAACAGGAAAATGGATAAAGATATGAAAGCCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188267.2 |
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| CDS-3UTR CCA 90 bp | CAAATAATTGTGAACTTTAAGTGTGTAAGTGTGTTGGCTCTTTCTCACAAGCAGATTCCAAACAGGATCTaGGTGGTCCCTAAGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: QIIVNFKCVSVLALSHKQIPNRI*VVPKIS Trigger: GGAGATCTTAGGGACCACCCAGATCCTGTTTGGAAT...CTGCTTGTGAGAAAGAGCCAACACACTTACACACTTAAAGTTCACAATTATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067673.13 |
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| CDS-3UTR TCA 90 bp | GGCCCCAGAGTTAATGAACTTACTGGGCTTTCATATCTTTATCCATTTTCCTGTCAAATGAAAAGTTCATaGTTCCAAACAGGATCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GPRVNELTGLSYLYPFSCQMKSS*FQTGSG Trigger: CCCAGATCCTGTTTGGAATCATGAACTTTTCATTTG...ACAGGAAAATGGATAAAGATATGAAAGCCCAGTAAGTTCATTAACTCTGGGGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000188267.2 |
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| CDS-3UTR CCA 90 bp | CAAATAATTGTGAACTTTAAGTGTGTAAGTGTGTTGGCTCTTTCTCACAAGCAGCAAACAGGATCTGGGTaGTCCCTAAGATCTCCAATT | + |
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Preference number: 4 (lower is better) Translates to: QIIVNFKCVSVLALSHKQQTGSG*SLRSPI Trigger: AATTGGAGATCTTAGGGACCACCCAGATCCTGTTTG...CTGCTTGTGAGAAAGAGCCAACACACTTACACACTTAAAGTTCACAATTATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067673.13 |
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| CDS-3UTR CCA 90 bp | ACTTACTGGGCTTTCATATCTTTATCCATTTTCCTGTTGTTGATCTGTTATTGGCAAACAGGATCTGGGTaGTCCCTAAGATCTCCAATT | + |
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Preference number: 4 (lower is better) Translates to: TYWAFISLSIFLLLICYWQTGSG*SLRSPI Trigger: AATTGGAGATCTTAGGGACCACCCAGATCCTGTTTG...CCAATAACAGATCAACAACAGGAAAATGGATAAAGATATGAAAGCCCAGTAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188267.2 |
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| CDS-3UTR CCA 90 bp | CCTCAAATAATTGTGAACTTTAAGTGTGTAAGTGTGTTGGCTCTTTCTCACAAGACACTGCATACCATCTaGAGAATAGCCACAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: PQIIVNFKCVSVLALSHKTLHTI*RIATDE Trigger: TTCATCTGTGGCTATTCTCCAGATGGTATGCAGTGT...CTTGTGAGAAAGAGCCAACACACTTACACACTTAAAGTTCACAATTATTTGAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| 3UTR CAA 72 bp | ACTTACTGGGCTTTCATATCTTTATCCATTTTCCTGTaGTTGATCTGTTATTGGTATCATGACTCGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: TYWAFISLSIFL*LICYWYHDSVS Trigger: TGACACCGAGTCATGATACCAATAACAGATCAACAACAGGAAAATGGATAAAGATATGAAAGCCCAGTAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188267.2 |
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| 3UTR CAA 72 bp | TACTGGGCTTTCATATCTTTATCCATTTTCCTGTTGTaGATCTGTTATTGGTATCATGACTCGGTGTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: YWAFISLSIFLL*ICYWYHDSVSN Trigger: ATTTGACACCGAGTCATGATACCAATAACAGATCAACAACAGGAAAATGGATAAAGATATGAAAGCCCAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188267.2 |
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| CDS-3UTR CAA 90 bp | TGTAAGTGTGTTGGCTCTTTCTCACAAGCAGGACTGGCATCTGAGTTTTATCATTGTAAGTTCTGTTGTTaGGTATTCTTGAGTGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: CKCVGSFSQAGLASEFYHCKFCC*VFLSGD Trigger: GTCACCACTCAAGAATACCAAACAACAGAACTTACA...ATGATAAAACTCAGATGCCAGTCCTGCTTGTGAGAAAGAGCCAACACACTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| CDS-3UTR CAA 90 bp | CCCATTTTCCCTCAAATAATTGTGAACTTTAAGTGTGTAAGTGTGTTGGCTCTTTGTAAGTTCTGTTGTTaGGTATTCTTGAGTGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: PIFPQIIVNFKCVSVLALCKFCC*VFLSGD Trigger: GTCACCACTCAAGAATACCAAACAACAGAACTTACA...AAGAGCCAACACACTTACACACTTAAAGTTCACAATTATTTGAGGGAAAATGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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| CDS-3UTR CAA 90 bp | ACTTACTGGGCTTTCATATCTTTATCCATTTTCCTGTTGTTGATCTGTTATTGGTGTAAGTTCTGTTGTTaGGTATTCTTGAGTGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: TYWAFISLSIFLLLICYWCKFCC*VFLSGD Trigger: GTCACCACTCAAGAATACCAAACAACAGAACTTACA...CCAATAACAGATCAACAACAGGAAAATGGATAAAGATATGAAAGCCCAGTAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188267.2 |
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| CDS CAA 72 bp | ATAGGCTGTGGCTGTAAGTTCTGTTGTTTGGTATTCTaGAGTGGTGACCTCTGGAGGGAACACCAGGAACAA | + |
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Preference number: 6 (lower is better) Translates to: IGCGCKFCCLVF*SGDLWREHQEQ Trigger: TTGTTCCTGGTGTTCCCTCCAGAGGTCACCACTCAAGAATACCAAACAACAGAACTTACAGCCACAGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 ENSMUST00000188267.2 |
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| CDS CAA 72 bp | TTGGGGATTATAGGCTGTGGCTGTAAGTTCTGTTGTTaGGTATTCTTGAGTGGTGACCTCTGGAGGGAACAC | + |
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Preference number: 6 (lower is better) Translates to: LGIIGCGCKFCC*VFLSGDLWREH Trigger: GTGTTCCCTCCAGAGGTCACCACTCAAGAATACCAAACAACAGAACTTACAGCCACAGCCTATAATCCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 ENSMUST00000188267.2 |
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| CDS TCA 72 bp | ACAGCATCCCCTTCCTTCTGTGTAGCATCCCAGAACTaGGGAAAAGAGGGAAATGAAGAGTTCAACAATGCT | + |
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Preference number: 6 (lower is better) Translates to: TASPSFCVASQN*GKEGNEEFNNA Trigger: AGCATTGTTGAACTCTTCATTTCCCTCTTTTCCTCAGTTCTGGGATGCTACACAGAAGGAAGGGGATGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067673.13 ENSMUST00000186937.7 |
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