Pregenerated sensors for MS4A4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056290Ensembl transcript IDs: ENSMUST00000035258.10, ENSMUST00000144135.9
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGACAGAAGAGTGCGGTTTTGCCAAGTTCTCCCATACCATCCCTaGCCATCCATTCTCAGGATCCATCTCTCCTCTTCTCCCAAACCT | + |
|
Preference number: 1 (lower is better) Translates to: LDRRVRFCQVLPYHP*PSILRIHLSSSPKP Trigger: AGGTTTGGGAGAAGAGGAGAGATGGATCCTGAGAATGGATGGTCAGGGATGGTATGGGAGAACTTGGCAAAACCGCACTCTTCTGTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR GCA 90 bp | GAAGAGGGCATTAGATCTCCTGGAACCTGGAACCTGAGTCAAGATTaGTGTGAGCCACAAAGTGGGTGCTGGGAACTGAAACCAGGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: EEGIRSPGTWNLSQD*CEPQSGCWELKPGF Trigger: AAAACCTGGTTTCAGTTCCCAGCACCCACTTTGTGGCTCACAGCAATCTTGACTCAGGTTCCAGGTTCCAGGAGATCTAATGCCCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR TCA 90 bp | TTGGCCACTGCTGTGTGCTGTGACCAGATTCAGAGAACAAAGGGTTaGGAGCTTAGCATAAGCACTTTCATAACTGACTGGGACATCCCA | + |
|
Preference number: 1 (lower is better) Translates to: LATAVCCDQIQRTKG*ELSISTFITDWDIP Trigger: TGGGATGTCCCAGTCAGTTATGAAAGTGCTTATGCTAAGCTCTCAACCCTTTGTTCTCTGAATCTGGTCACAGCACACAGCAGTGGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR GCA 90 bp | GGAACCTGGAACCTGAGTCAAGATTGCTGTGAGCCACAAAGTGGGTaGTGGGAACTGAAACCAGGTTTTTGTCCAAGAGTAACAAATGCT | + |
|
Preference number: 1 (lower is better) Translates to: GTWNLSQDCCEPQSG*WELKPGFCPRVTNA Trigger: AGCATTTGTTACTCTTGGACAAAAACCTGGTTTCAGTTCCCAGCACCCACTTTGTGGCTCACAGCAATCTTGACTCAGGTTCCAGGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CCA 90 bp | TGTGACATATTGGGCAATAGGAAAGATGCAGCTGAGAATACAGCTTaGCCACTGCTGTGTGCTGTGACCAGATTCAGAGAACAAAGGGTT | + |
|
Preference number: 1 (lower is better) Translates to: CDILGNRKDAAENTA*PLLCAVTRFREQRV Trigger: AACCCTTTGTTCTCTGAATCTGGTCACAGCACACAGCAGTGGCCAAGCTGTATTCTCAGCTGCATCTTTCCTATTGCCCAATATGTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR GCA 90 bp | TGGGTGCTGGGAACTGAAACCAGGTTTTTGTCCAAGAGTAACAAATaGTCTGAACTGCTAAGCCATCTCTCCAATCCCATTTGTTATGTT | + |
|
Preference number: 1 (lower is better) Translates to: WVLGTETRFLSKSNK*SELLSHLSNPICYV Trigger: AACATAACAAATGGGATTGGAGAGATGGCTTAGCAGTTCAGAGCATTTGTTACTCTTGGACAAAAACCTGGTTTCAGTTCCCAGCACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR GCA 90 bp | AGACAGGATAAGAACACTGAATACATTCATTACAGTTATAGGAAATaGAACCCTGCAGCTGTAGGGAAAACGCTTCCCTTCCTCTTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: RQDKNTEYIHYSYRK*NPAAVGKTLPFLFP Trigger: AGGAAAGAGGAAGGGAAGCGTTTTCCCTACAGCTGCAGGGTTGCATTTCCTATAACTGTAATGAATGTATTCAGTGTTCTTATCCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CCA 90 bp | TCATATCTGAAAGATTCAGCAAGCCTTCAAAATAATGGCACTACTTaGGACCAACTGTTCAAAGATGTGAGCCTTAGGGGAGATTACAGC | + |
|
Preference number: 1 (lower is better) Translates to: SYLKDSASLQNNGTT*DQLFKDVSLRGDYS Trigger: GCTGTAATCTCCCCTAAGGCTCACATCTTTGAACAGTTGGTCCCAAGTAGTGCCATTATTTTGAAGGCTTGCTGAATCTTTCAGATATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR GCA 90 bp | GTCACAGATCCTATACACTGGACAGAAGAGTGCGGTTTTGCCAAGTTCTCCCATGTGAGTGTGACCCATTaGCAACAAGAAGCACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VTDPIHWTEECGFAKFSHVSVTH*QQEALL Trigger: CAGCAGTGCTTCTTGTTGGCAATGGGTCACACTCAC...ATGGGAGAACTTGGCAAAACCGCACTCTTCTGTCCAGTGTATAGGATCTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CCA 90 bp | GTCACAGATCCTATACACTGGACAGAAGAGTGCGGTTTTGCCAAGTTCTCCCATTTTTTGCAAATGTTCTaGTCCTCAGCCCACACCCTC | + |
|
Preference number: 2 (lower is better) Translates to: VTDPIHWTEECGFAKFSHFLQMF*SSAHTL Trigger: GAGGGTGTGGGCTGAGGACCAGAACATTTGCAAAAA...ATGGGAGAACTTGGCAAAACCGCACTCTTCTGTCCAGTGTATAGGATCTGTGAC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CCA 90 bp | GTCACAGATCCTATACACTGGACAGAAGAGTGCGGTTTTGCCAAGTTCTCCCATACTTTCATAACTGACTaGGACATCCCATCCCTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: VTDPIHWTEECGFAKFSHTFITD*DIPSLA Trigger: AGCTAGGGATGGGATGTCCCAGTCAGTTATGAAAGT...ATGGGAGAACTTGGCAAAACCGCACTCTTCTGTCCAGTGTATAGGATCTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR GCA 90 bp | CCAGACTTCTACATTACTGCTTCCCTCCCCCACAATGTTATTCATGTAGTTTTAGAGCCACAAAGTGGGTaGTGGGAACTGAAACCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: PDFYITASLPHNVIHVVLEPQSG*WELKPG Trigger: ACCTGGTTTCAGTTCCCAGCACCCACTTTGTGGCTC...TAAAACTACATGAATAACATTGTGGGGGAGGGAAGCAGTAATGTAGAAGTCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR TCA 90 bp | AGACTTGCCATTTTCTCTTCTCTTTCCCAAGCCAACGTGGTTAATTATTTTCTCAGGCTGGCCTTGTGCTaGGATTCTAGGCATACATGG | + |
|
Preference number: 2 (lower is better) Translates to: RLAIFSSLSQANVVNYFLRLALC*DSRHTW Trigger: CCATGTATGCCTAGAATCTCAGCACAAGGCCAGCCT...GAGAAAATAATTAACCACGTTGGCTTGGGAAAGAGAAGAGAAAATGGCAAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAATACATTCATTACAGTTATAGGAAATGCAACCCTGCAGCTGTAGGGAAATTGTGGGCCTGTGCCTaGAAAAGTCAGAAGAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: TEYIHYSYRKCNPAAVGKLWACA*KSQKRA Trigger: TGCCCTCTTCTGACTTTTGCAGGCACAGGCCCACAA...TTTCCCTACAGCTGCAGGGTTGCATTTCCTATAACTGTAATGAATGTATTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR GCA 90 bp | TCATTCCCATCGACAACCTTCCAGTTCAAGTCTTCAGTTTATTCTTCATTCATCCAGCTTGTGGGCCTGTaGCTGCAAAAGTCAGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SFPSTTFQFKSSVYSSFIQLVGL*LQKSEE Trigger: CTCTTCTGACTTTTGCAGGCACAGGCCCACAAGCTG...GATGAATGAAGAATAAACTGAAGACTTGAACTGGAAGGTTGTCGATGGGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR TCA 90 bp | TCATTCCCATCGACAACCTTCCAGTTCAAGTCTTCAGTTTATTCTTCATTCATCGTGGGTGCTGGGAACTaGAACCAGGTTTTTGTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SFPSTTFQFKSSVYSSFIVGAGN*NQVFVQ Trigger: TTGGACAAAAACCTGGTTTCAGTTCCCAGCACCCAC...GATGAATGAAGAATAAACTGAAGACTTGAACTGGAAGGTTGTCGATGGGAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR GCA 90 bp | CCAGACTTCTACATTACTGCTTCCCTCCCCCACAATGTTATTCATGTAGTTTTATATGATGTGTGTATGTaGACAGCTTGTGGGCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PDFYITASLPHNVIHVVLYDVCM*TACGPV Trigger: CACAGGCCCACAAGCTGTGCACATACACACATCATA...TAAAACTACATGAATAACATTGTGGGGGAGGGAAGCAGTAATGTAGAAGTCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTGCTCATAATGTCTGTGACATATTGGGCAATAGGAAAGATGCAGCTGAGACCTGCAGAAGTACCATaGCTGCTTGGTAATATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: VLLIMSVTYWAIGKMQLRPAEVP*LLGNMQ Trigger: TTGCATATTACCAAGCAGCCATGGTACTTCTGCAGG...TCTCAGCTGCATCTTTCCTATTGCCCAATATGTCACAGACATTATGAGCAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR TCA 90 bp | AGACTTGCCATTTTCTCTTCTCTTTCCCAAGCCAACGTGGTTAATTATTTTCTCCACTGCTGTGTGCTGTaGCCAGATTCAGAGAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: RLAIFSSLSQANVVNYFLHCCVL*PDSENK Trigger: TTTGTTCTCTGAATCTGGTCACAGCACACAGCAGTG...GAGAAAATAATTAACCACGTTGGCTTGGGAAAGAGAAGAGAAAATGGCAAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR TCA 90 bp | CCAGACTTCTACATTACTGCTTCCCTCCCCCACAATGTTATTCATGTAGTTTTATCTCCTTTGGTTCTTTaGTGTAGGATCTCCTGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: PDFYITASLPHNVIHVVLSPLVL*CRISCS Trigger: GCTACAGGAGATCCTACATCAAAGAACCAAAGGAGA...TAAAACTACATGAATAACATTGTGGGGGAGGGAAGCAGTAATGTAGAAGTCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAATACATTCATTACAGTTATAGGAAATGCAACCCTGCAGCTGTAGGGAAAAGATCTCCTGGAACCTaGAACCTGAGTCAAGATTGC | + |
|
Preference number: 2 (lower is better) Translates to: TEYIHYSYRKCNPAAVGKRSPGT*NLSQDC Trigger: GCAATCTTGACTCAGGTTCCAGGTTCCAGGAGATCT...TTTCCCTACAGCTGCAGGGTTGCATTTCCTATAACTGTAATGAATGTATTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CCA 90 bp | ATTCTCAGGATCCATCTCTCCTCTTCTCCCAAACCTAGGGCTTTTGAGCTTTATGTTTTGGTAAGTTTTTaGCTCCTGGAACATAGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: ILRIHLSSSPKPRAFELYVLVSF*LLEHSN Trigger: ATTGCTATGTTCCAGGAGCCAAAAACTTACCAAAAC...ATAAAGCTCAAAAGCCCTAGGTTTGGGAGAAGAGGAGAGATGGATCCTGAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CCA 90 bp | ATCCTAGGGAAATACACACACACACACATCAAAATTAGACTATTTCTCCTGGGTCTTGTACACATTTCCTaGAACATTGGTCCCTTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ILGKYTHTHIKIRLFLLGLVHIS*NIGPLV Trigger: CACCAAGGGACCAATGTTCCAGGAAATGTGTACAAG...ACCCAGGAGAAATAGTCTAATTTTGATGTGTGTGTGTGTGTATTTCCCTAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTGCTCATAATGTCTGTGACATATTGGGCAATAGGAAAGATGCAGCTGAGACAGAAGTACCATGGCTaGTTGGTAATATGCAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: VLLIMSVTYWAIGKMQLRQKYHG*LVICKY Trigger: ATATTTGCATATTACCAAGCAGCCATGGTACTTCTG...TCTCAGCTGCATCTTTCCTATTGCCCAATATGTCACAGACATTATGAGCAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR GCA 90 bp | ATTCTCAGGATCCATCTCTCCTCTTCTCCCAAACCTAGGGCTTTTGAGCTTTATATGGAGAGGGAAAAATaGAGTATTTCACAATACCAT | + |
|
Preference number: 2 (lower is better) Translates to: ILRIHLSSSPKPRAFELYMEREK*SISQYH Trigger: ATGGTATTGTGAAATACTGCATTTTTCCCTCTCCAT...ATAAAGCTCAAAAGCCCTAGGTTTGGGAGAAGAGGAGAGATGGATCCTGAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CCA 90 bp | CATGTGTTATACACAACCATTTCTTGTCATTCCCATCGACAACCTTCCAGTTCAATGTCTGTGACATATTaGGCAATAGGAAAGATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HVLYTTISCHSHRQPSSSMSVTY*AIGKMQ Trigger: CTGCATCTTTCCTATTGCCCAATATGTCACAGACAT...TGAACTGGAAGGTTGTCGATGGGAATGACAAGAAATGGTTGTGTATAACACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CAA 90 bp | TCAAATGGAGAGGGAAAAATGCAGTATTTCACAATACCATCAGTCTaGCTCATAATGTCTGTGACATATTGGGCAATAGGAAAGATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SNGEGKMQYFTIPSV*LIMSVTYWAIGKMQ Trigger: CTGCATCTTTCCTATTGCCCAATATGTCACAGACATTATGAGCAAGACTGATGGTATTGTGAAATACTGCATTTTTCCCTCTCCATTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CAA 90 bp | ACACCCTCTGGGAAAATCCCTTTAAGAGTTTGCATTCATTTAGACTaGCCATTTTCTCTTCTCTTTCCCAAGCCAACGTGGTTAATTATT | + |
|
Preference number: 2 (lower is better) Translates to: TPSGKIPLRVCIHLD*PFSLLFPKPTWLII Trigger: AATAATTAACCACGTTGGCTTGGGAAAGAGAAGAGAAAATGGCAAGTCTAAATGAATGCAAACTCTTAAAGGGATTTTCCCAGAGGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CCA 90 bp | AGACTTGCCATTTTCTCTTCTCTTTCCCAAGCCAACGTGGTTAATTATTTTCTCCCCAAATGCTTCAAATaGAGAGGGAAAAATGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: RLAIFSSLSQANVVNYFLPKCFK*RGKNAV Trigger: TACTGCATTTTTCCCTCTCCATTTGAAGCATTTGGG...GAGAAAATAATTAACCACGTTGGCTTGGGAAAGAGAAGAGAAAATGGCAAGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR TCA 90 bp | TCATTCCCATCGACAACCTTCCAGTTCAAGTCTTCAGTTTATTCTTCATTCATCAAGGATCAGGTATTCTaGTTTCAGGCATTTCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SFPSTTFQFKSSVYSSFIKDQVF*FQAFLF Trigger: AAAGAGAAATGCCTGAAATCAGAATACCTGATCCTT...GATGAATGAAGAATAAACTGAAGACTTGAACTGGAAGGTTGTCGATGGGAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CAA 90 bp | CATCACATGTGTCTTACTAAAAGAAATACCATAGTGTCCCTGATTTaGCCTCTCCATCTATCTAGACTGAATGATTTATTACCTGCTACT | + |
|
Preference number: 2 (lower is better) Translates to: HHMCLTKRNTIVSLI*PLHLSRLNDLLPAT Trigger: AGTAGCAGGTAATAAATCATTCAGTCTAGATAGATGGAGAGGCAAAATCAGGGACACTATGGTATTTCTTTTAGTAAGACACATGTGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR TCA 72 bp | CAGAAGAGGGCATTAGATCTCCTGGAACCTGGAACCTaGGTCAAGATTGCTGTGAGCCACAAAGTGGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QKRALDLLEPGT*VKIAVSHKVGA Trigger: AGCACCCACTTTGTGGCTCACAGCAATCTTGACTCAGGTTCCAGGTTCCAGGAGATCTAATGCCCTCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR TCA 72 bp | AGAGTGCGGTTTTGCCAAGTTCTCCCATACCATCCCTaGCCATCCATTCTCAGGATCCATCTCTCCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RVRFCQVLPYHP*PSILRIHLSSS Trigger: AGAAGAGGAGAGATGGATCCTGAGAATGGATGGTCAGGGATGGTATGGGAGAACTTGGCAAAACCGCACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR TCA 72 bp | ACATTGGTCCCTTGGTGTTCTGATGGTAGCAATGGTTaGAGTGTCATTGGGGGTGCCATCACTGTCTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: TLVPWCSDGSNG*SVIGGAITVST Trigger: TGTTGAGACAGTGATGGCACCCCCAATGACACTTCAACCATTGCTACCATCAGAACACCAAGGGACCAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| 3UTR GCA 72 bp | ATTAGATCTCCTGGAACCTGGAACCTGAGTCAAGATTaGTGTGAGCCACAAAGTGGGTGCTGGGAACTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: IRSPGTWNLSQD*CEPQSGCWELK Trigger: TTTCAGTTCCCAGCACCCACTTTGTGGCTCACAGCAATCTTGACTCAGGTTCCAGGTTCCAGGAGATCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR GCA 72 bp | AGTATGATGTGTGTATGTGCACAGCTTGTGGGCCTGTaGCTGCAAAAGTCAGAAGAGGGCATTAGATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SMMCVCAQLVGL*LQKSEEGIRSP Trigger: AGGAGATCTAATGCCCTCTTCTGACTTTTGCAGGCACAGGCCCACAAGCTGTGCACATACACACATCATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR GCA 72 bp | AAAGCTGCTTTCCCCAGTCGGACCTTATTTCCATTCTaGTGTTACATTCTTGGTGGTCTCCAGAGTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: KAAFPSRTLFPF*CYILGGLQSLS Trigger: GCTCAGACTCTGGAGACCACCAAGAATGTAACAGCAGAATGGAAATAAGGTCCGACTGGGGAAAGCAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CCA 72 bp | CAGTCGGACCTTATTTCCATTCTGCTGTTACATTCTTaGTGGTCTCCAGAGTCTGAGCTCTGCTCTGTAACC | + |
|
Preference number: 3 (lower is better) Translates to: QSDLISILLLHS*WSPESELCSVT Trigger: GGTTACAGAGCAGAGCTCAGACTCTGGAGACCACCAAGAATGTAACAGCAGAATGGAAATAAGGTCCGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTTGGCCACTGCTGTGTGCTGTGACCAGATTCAGAGAACAAAGGGTTGAGACTGAAACCAGGTTTTaGTCCAAGAGTAACAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: TAWPLLCAVTRFREQRVETETRF*SKSNKC Trigger: GCATTTGTTACTCTTGGACAAAAACCTGGTTTCAGT...CTCAACCCTTTGTTCTCTGAATCTGGTCACAGCACACAGCAGTGGCCAAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR TCA 72 bp | ATAATGGCACTACTTGGGACCAACTGTTCAAAGATGTaGGCCTTAGGGGAGATTACAGCGCCAAACCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: IMALLGTNCSKM*ALGEITAPNHS Trigger: ACTGTGGTTTGGCGCTGTAATCTCCCCTAAGGCTCACATCTTTGAACAGTTGGTCCCAAGTAGTGCCATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR GCA 72 bp | AATACTGTCACAGATCCTATACACTGGACAGAAGAGTaGGGTTTTGCCAAGTTCTCCCATACCATCCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: NTVTDPIHWTEE*GFAKFSHTIPD Trigger: GTCAGGGATGGTATGGGAGAACTTGGCAAAACCGCACTCTTCTGTCCAGTGTATAGGATCTGTGACAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CCA 72 bp | CTCCTGGGTGGTTCTTGTACACATTTCCTGGAACATTaGTCCCTTGGTGTTCTGATGGTAGCAATGGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLGGSCTHFLEH*SLGVLMVAMVE Trigger: TTCAACCATTGCTACCATCAGAACACCAAGGGACCAATGTTCCAGGAAATGTGTACAAGAACCACCCAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCACAGATCCTATACACTGGACAGAAGAGTGCGGTTTTGCCAAGTTCTCCCATGTTAGGCTTTCTACTTaGATCCTTACTTTCCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VTDPIHWTEECGFAKFSHVRLST*ILTFPF Trigger: GAAGGGGAAAGTAAGGATCAAAGTAGAAAGCCTAAC...ATGGGAGAACTTGGCAAAACCGCACTCTTCTGTCCAGTGTATAGGATCTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CAA 90 bp | GTCACAGATCCTATACACTGGACAGAAGAGTGCGGTTTTGCCAAGTTCTCCCATGCTTTTGAGCTTTATTaGAAAACGGGACATCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VTDPIHWTEECGFAKFSHAFELY*KTGHLQ Trigger: CTGCAGATGTCCCGTTTTCAAATAAAGCTCAAAAGC...ATGGGAGAACTTGGCAAAACCGCACTCTTCTGTCCAGTGTATAGGATCTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR TCA 72 bp | GCTGTGTGCTGTGACCAGATTCAGAGAACAAAGGGTTaGGAGCTTAGCATAAGCACTTTCATAACTGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: AVCCDQIQRTKG*ELSISTFITDW Trigger: CCAGTCAGTTATGAAAGTGCTTATGCTAAGCTCTCAACCCTTTGTTCTCTGAATCTGGTCACAGCACACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CAA 90 bp | GTCACAGATCCTATACACTGGACAGAAGAGTGCGGTTTTGCCAAGTTCTCCCATAATCCCTTTAAGAGTTaGCATTCATTTAGACTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VTDPIHWTEECGFAKFSHNPFKS*HSFRLA Trigger: GGCAAGTCTAAATGAATGCAAACTCTTAAAGGGATT...ATGGGAGAACTTGGCAAAACCGCACTCTTCTGTCCAGTGTATAGGATCTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CCA 72 bp | AAAGATTCAGCAAGCCTTCAAAATAATGGCACTACTTaGGACCAACTGTTCAAAGATGTGAGCCTTAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KDSASLQNNGTT*DQLFKDVSLRG Trigger: TCCCCTAAGGCTCACATCTTTGAACAGTTGGTCCCAAGTAGTGCCATTATTTTGAAGGCTTGCTGAATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CCA 72 bp | CCTTCAGATGTTAACAGTTTGAACCAATTTCTCCTTTaGTTCTTTGATGTAGGATCTCCTGTAGCCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PSDVNSLNQFLL*FFDVGSPVAQA Trigger: AGCCTGGGCTACAGGAGATCCTACATCAAAGAACCAAAGGAGAAATTGGTTCAAACTGTTAACATCTGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CCA 72 bp | AATGCATGTAAGAATACTGTCACAGATCCTATACACTaGACAGAAGAGTGCGGTTTTGCCAAGTTCTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: NACKNTVTDPIH*TEECGFAKFSH Trigger: ATGGGAGAACTTGGCAAAACCGCACTCTTCTGTCCAGTGTATAGGATCTGTGACAGTATTCTTACATGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR GCA 72 bp | AAGAACACTGAATACATTCATTACAGTTATAGGAAATaGAACCCTGCAGCTGTAGGGAAAACGCTTCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KNTEYIHYSYRK*NPAAVGKTLPF Trigger: GAAGGGAAGCGTTTTCCCTACAGCTGCAGGGTTGCATTTCCTATAACTGTAATGAATGTATTCAGTGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR GCA 72 bp | TCTACTACTCTTCCACCATCCAGACTTCTACATTACTaGTTCCCTCCCCCACAATGTTATTCATGTAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: STTLPPSRLLHY*FPPPQCYSCSF Trigger: AAAACTACATGAATAACATTGTGGGGGAGGGAAGCAGTAATGTAGAAGTCTGGATGGTGGAAGAGTAGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CCA 72 bp | AGAAATAGCAGCAAGGTTATGGTTTTGGTAAGTTTTTaGCTCCTGGAACATAGCAATACCTGCAGAAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: RNSSKVMVLVSF*LLEHSNTCRST Trigger: GGTACTTCTGCAGGTATTGCTATGTTCCAGGAGCCAAAAACTTACCAAAACCATAACCTTGCTGCTATTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CCA 72 bp | TTTTTGCAAATGTTCTGGTCCTCAGCCCACACCCTCTaGGAAAATCCCTTTAAGAGTTTGCATTCATTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: FLQMFWSSAHTL*ENPFKSLHSFR Trigger: TCTAAATGAATGCAAACTCTTAAAGGGATTTTCCCAGAGGGTGTGGGCTGAGGACCAGAACATTTGCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CAA 90 bp | AGACTTGCCATTTTCTCTTCTCTTTCCCAAGCCAACGTGGTTAATTATTTTCTCTTATTGGTCTTTGTCTaGAACCAGTCGCTTTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: RLAIFSSLSQANVVNYFLLLVFV*NQSLCT Trigger: AGTGCAAAGCGACTGGTTCAAGACAAAGACCAATAA...GAGAAAATAATTAACCACGTTGGCTTGGGAAAGAGAAGAGAAAATGGCAAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCTGGGAAAATCCCTTTAAGAGTTTGCATTCATTTAGACTTGCCATTTTCTATACACAACCATTTCTaGTCATTCCCATCGACAACC | + |
|
Preference number: 3 (lower is better) Translates to: PSGKIPLRVCIHLDLPFSIHNHF*SFPSTT Trigger: GGTTGTCGATGGGAATGACAAGAAATGGTTGTGTAT...AGAAAATGGCAAGTCTAAATGAATGCAAACTCTTAAAGGGATTTTCCCAGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CCA 72 bp | ACACACACACACACATCAAAATTAGACTATTTCTCCTaGGTGGTTCTTGTACACATTTCCTGGAACATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: THTHTSKLDYFS*VVLVHISWNIG Trigger: ACCAATGTTCCAGGAAATGTGTACAAGAACCACCCAGGAGAAATAGTCTAATTTTGATGTGTGTGTGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| 3UTR-3UTR CAA 90 bp | CATGTGTTATACACAACCATTTCTTGTCATTCCCATCGACAACCTTCCAGTTCAATCTTTGCAAATTCATaGCCCCTTGTACATACAATG | + |
|
Preference number: 3 (lower is better) Translates to: HVLYTTISCHSHRQPSSSIFANS*PLVHTM Trigger: CATTGTATGTACAAGGGGCAATGAATTTGCAAAGAT...TGAACTGGAAGGTTGTCGATGGGAATGACAAGAAATGGTTGTGTATAACACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CAA 90 bp | TCATTCCCATCGACAACCTTCCAGTTCAAGTCTTCAGTTTATTCTTCATTCATCGAGGGAAAATGTTGTTaGTTTCTTTGGTCTGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SFPSTTFQFKSSVYSSFIEGKCC*FLWSAL Trigger: CAAAGCAGACCAAAGAAACAAACAACATTTTCCCTC...GATGAATGAAGAATAAACTGAAGACTTGAACTGGAAGGTTGTCGATGGGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTTACCTACATGTGTTATACACAACCATTTCTTGTCATTCCCATCGACAACCTATAGTGTCCCTGATTTaGCCTCTCCATCTATCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: IYLHVLYTTISCHSHRQPIVSLI*PLHLSR Trigger: TCTAGATAGATGGAGAGGCAAAATCAGGGACACTAT...AGGTTGTCGATGGGAATGACAAGAAATGGTTGTGTATAACACATGTAGGTAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR-3UTR CAA 90 bp | AGACTTGCCATTTTCTCTTCTCTTTCCCAAGCCAACGTGGTTAATTATTTTCTCAAACTGAGTTTTAAGTaGTCTCTACTACTCTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RLAIFSSLSQANVVNYFLKLSFK*SLLLFH Trigger: GTGGAAGAGTAGTAGAGACAACTTAAAACTCAGTTT...GAGAAAATAATTAACCACGTTGGCTTGGGAAAGAGAAGAGAAAATGGCAAGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR TCA 90 bp | TATTTCTCCTGGGTGGTTCTTGTACACATTTCCTGGAACATTGGTCCCTTGGTGCATGGTGGCCTTGAATaGAGTGCTCACGGGAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: YFSWVVLVHISWNIGPLVHGGLE*SAHGSY Trigger: GTAACTCCCGTGAGCACTTCATTCAAGGCCACCATG...CACCAAGGGACCAATGTTCCAGGAAATGTGTACAAGAACCACCCAGGAGAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| CDS-3UTR TCA 90 bp | TATTTCTCCTGGGTGGTTCTTGTACACATTTCCTGGAACATTGGTCCCTTGGTGTTGACATGGTGGCCTTaGATGAAGTGCTCACGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YFSWVVLVHISWNIGPLVLTWWP*MKCSRE Trigger: CTCCCGTGAGCACTTCATTCAAGGCCACCATGTCAA...CACCAAGGGACCAATGTTCCAGGAAATGTGTACAAGAACCACCCAGGAGAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| 3UTR CAA 72 bp | TCACAGATCCTATACACTGGACAGAAGAGTGCGGTTTaGCCAAGTTCTCCCATACCATCCCTGACCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQILYTGQKSAV*PSSPIPSLTIH Trigger: ATGGATGGTCAGGGATGGTATGGGAGAACTTGGCAAAACCGCACTCTTCTGTCCAGTGTATAGGATCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR TCA 90 bp | GTCTTGCTCATAATGTCTGTGACATATTGGGCAATAGGAAAGATGCAGCTGAGACCGAAACGGAAACTGTaGACCCACAGCCACACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLLIMSVTYWAIGKMQLRPKRKL*THSHTD Trigger: GTCAGTGTGGCTGTGGGTTCACAGTTTCCGTTTCGG...TCTCAGCTGCATCTTTCCTATTGCCCAATATGTCACAGACATTATGAGCAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR GCA 90 bp | GGGGTGCCATCACTGTCTCAACAGGATTTGATGGTAGCACTACAAGAACCTAAGAGCTTCACATCCAAATaGAGAGACGGACACAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVPSLSQQDLMVALQEPKSFTSK*RDGHSK Trigger: CTTGCTGTGTCCGTCTCTGCATTTGGATGTGAAGCT...CTTAGGTTCTTGTAGTGCTACCATCAAATCCTGTTGAGACAGTGATGGCACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| CDS-3UTR GCA 90 bp | ATTCTCAGGATCCATCTCTCCTCTTCTCCCAAACCTAGGGCTTTTGAGCTTTATAAGTGTCATTGGGGGTaGCATCACTGTCTCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILRIHLSSSPKPRAFELYKCHWG*HHCLNR Trigger: CCTGTTGAGACAGTGATGGCACCCCCAATGACACTT...ATAAAGCTCAAAAGCCCTAGGTTTGGGAGAAGAGGAGAGATGGATCCTGAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CAA 72 bp | GCCACAAAGTGGGTGCTGGGAACTGAAACCAGGTTTTaGTCCAAGAGTAACAAATGCTCTGAACTGCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATKWVLGTETRF*SKSNKCSELLS Trigger: GCTTAGCAGTTCAGAGCATTTGTTACTCTTGGACAAAAACCTGGTTTCAGTTCCCAGCACCCACTTTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR GCA 90 bp | CCCTCTGGGAAAATCCCTTTAAGAGTTTGCATTCATTTAGACTTGCCATTTTCTAGGTGTCACTCCTGCTaGAATGGACAGGGATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSGKIPLRVCIHLDLPFSRCHSC*NGQGSG Trigger: TCCGGATCCCTGTCCATTGCAGCAGGAGTGACACCT...AGAAAATGGCAAGTCTAAATGAATGCAAACTCTTAAAGGGATTTTCCCAGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CAA 72 bp | GTGTCATTGGGGGTGCCATCACTGTCTCAACAGGATTaGATGGTAGCACTACAAGAACCTAAGACACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLGVPSLSQQD*MVALQEPKTLF Trigger: AAAGAGTGTCTTAGGTTCTTGTAGTGCTACCATCAAATCCTGTTGAGACAGTGATGGCACCCCCAATGACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| CDS-3UTR TCA 90 bp | ATTCTCAGGATCCATCTCTCCTCTTCTCCCAAACCTAGGGCTTTTGAGCTTTATGGGATCCGGAGACAATaGACATTATTGATCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILRIHLSSSPKPRAFELYGIRRQ*TLLIPK Trigger: TTTGGGGATCAATAATGTTCATTGTCTCCGGATCCC...ATAAAGCTCAAAAGCCCTAGGTTTGGGAGAAGAGGAGAGATGGATCCTGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR CCA 90 bp | TCATTCCCATCGACAACCTTCCAGTTCAAGTCTTCAGTTTATTCTTCATTCATCTCACTCCTGCTGCAATaGACAGGGATCCGGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SFPSTTFQFKSSVYSSFISLLLQ*TGIRRQ Trigger: TTGTCTCCGGATCCCTGTCCATTGCAGCAGGAGTGA...GATGAATGAAGAATAAACTGAAGACTTGAACTGGAAGGTTGTCGATGGGAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR CCA 90 bp | GTCTTGCTCATAATGTCTGTGACATATTGGGCAATAGGAAAGATGCAGCTGAGACTTGTACACATTTCCTaGAACATTGGTCCCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLLIMSVTYWAIGKMQLRLVHIS*NIGPLV Trigger: CACCAAGGGACCAATGTTCCAGGAAATGTGTACAAG...TCTCAGCTGCATCTTTCCTATTGCCCAATATGTCACAGACATTATGAGCAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR TCA 90 bp | CCAGACTTCTACATTACTGCTTCCCTCCCCCACAATGTTATTCATGTAGTTTTACATAACAGAATTCTTTaGAGGCACAGCAACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PDFYITASLPHNVIHVVLHNRIL*RHSNSR Trigger: CCTGGAGTTGCTGTGCCTTCAAAGAATTCTGTTATG...TAAAACTACATGAATAACATTGTGGGGGAGGGAAGCAGTAATGTAGAAGTCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR GCA 90 bp | TCATTCCCATCGACAACCTTCCAGTTCAAGTCTTCAGTTTATTCTTCATTCATCAGCTTCACATCCAAATaGAGAGACGGACACAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPSTTFQFKSSVYSSFISFTSK*RDGHSK Trigger: CTTGCTGTGTCCGTCTCTGCATTTGGATGTGAAGCT...GATGAATGAAGAATAAACTGAAGACTTGAACTGGAAGGTTGTCGATGGGAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR CCA 90 bp | ACTGAATACATTCATTACAGTTATAGGAAATGCAACCCTGCAGCTGTAGGGAAAGGAACATTGGTCCCTTaGTGTTCTGATGGTAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TEYIHYSYRKCNPAAVGKGTLVP*CSDGSN Trigger: ATTGCTACCATCAGAACACCAAGGGACCAATGTTCC...TTTCCCTACAGCTGCAGGGTTGCATTTCCTATAACTGTAATGAATGTATTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR TCA 90 bp | CATGTGTTATACACAACCATTTCTTGTCATTCCCATCGACAACCTTCCAGTTCAGACAATGAACATTATTaGTCCCCAAATTGGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: HVLYTTISCHSHRQPSSSDNEHY*SPNWDH Trigger: ATGGTCCCAATTTGGGGATCAATAATGTTCATTGTC...TGAACTGGAAGGTTGTCGATGGGAATGACAAGAAATGGTTGTGTATAACACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CAA 72 bp | GAGGGAAAAATGCAGTATTTCACAATACCATCAGTCTaGCTCATAATGTCTGTGACATATTGGGCAATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGKMQYFTIPSV*LIMSVTYWAIG Trigger: TCCTATTGCCCAATATGTCACAGACATTATGAGCAAGACTGATGGTATTGTGAAATACTGCATTTTTCCCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| 3UTR CAA 72 bp | ACAAAGAGTCGATTCTGGAACTACTCCGAAATAGTTTaGAGATGTATCTTCTCTGGCTGGTGTGTGAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TKSRFWNYSEIV*RCIFSGWCVKF Trigger: AAATTTCACACACCAGCCAGAGAAGATACATCTCAAAACTATTTCGGAGTAGTTCCAGAATCGACTCTTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR CCA 90 bp | ATCCTAGGGAAATACACACACACACACATCAAAATTAGACTATTTCTCCTGGGTCACAGAGAACGACAGTaGAATTCTTCCAAATTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILGKYTHTHIKIRLFLLGHRERQ*NSSKLV Trigger: AACTAATTTGGAAGAATTCCACTGTCGTTCTCTGTG...ACCCAGGAGAAATAGTCTAATTTTGATGTGTGTGTGTGTGTATTTCCCTAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| 3UTR CAA 72 bp | AGATATTTACCTACATGTGTTATACACAACCATTTCTaGTCATTCCCATCGACAACCTTCCAGTTCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RYLPTCVIHNHF*SFPSTTFQFKS Trigger: AGACTTGAACTGGAAGGTTGTCGATGGGAATGACAAGAAATGGTTGTGTATAACACATGTAGGTAAATATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR CAA 90 bp | ATTGGGGGTGCCATCACTGTCTCAACAGGATTTGATGGTAGCACTACAAGAACCCTTGACATGGTGGCCTaGAATGAAGTGCTCACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: IGGAITVSTGFDGSTTRTLDMVA*NEVLTG Trigger: TCCCGTGAGCACTTCATTCAAGGCCACCATGTCAAG...GGTTCTTGTAGTGCTACCATCAAATCCTGTTGAGACAGTGATGGCACCCCCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTGGCCACTGCTGTGTGCTGTGACCAGATTCAGAGAACAAAGGGTTGAGTTATTGATCCCCAAATaGGGACCATTAACATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: TAWPLLCAVTRFREQRVELLIPK*GPLTSL Trigger: CAGTGATGTTAATGGTCCCAATTTGGGGATCAATAA...CTCAACCCTTTGTTCTCTGAATCTGGTCACAGCACACAGCAGTGGCCAAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR CAA 90 bp | GTCACAGATCCTATACACTGGACAGAAGAGTGCGGTTTTGCCAAGTTCTCCCATACATTTCCTGGAACATaGGTCCCTTGGTGTTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VTDPIHWTEECGFAKFSHTFPGT*VPWCSD Trigger: ATCAGAACACCAAGGGACCAATGTTCCAGGAAATGT...ATGGGAGAACTTGGCAAAACCGCACTCTTCTGTCCAGTGTATAGGATCTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS-3UTR CAA 90 bp | TGGTTCTTGTACACATTTCCTGGAACATTGGTCCCTTGGTGTTCTGATGGTAGCATTAGTTTGCTCCTGTaGACAGCTGCACATGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: WFLYTFPGTLVPWCSDGSISLLL*TAAHVD Trigger: GTCTACATGTGCAGCTGTCAACAGGAGCAAACTAAT...GCTACCATCAGAACACCAAGGGACCAATGTTCCAGGAAATGTGTACAAGAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| CDS-3UTR CAA 90 bp | AGTGTCATTGGGGGTGCCATCACTGTCTCAACAGGATTTGATGGTAGCACTACATTCTTCCAAATTAGTTaGCTCCTGTTGACAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVIGGAITVSTGFDGSTTFFQIS*LLLTAA Trigger: TGCAGCTGTCAACAGGAGCAAACTAATTTGGAAGAA...TGTAGTGCTACCATCAAATCCTGTTGAGACAGTGATGGCACCCCCAATGACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| CDS CAA 90 bp | TTGCTCCTGTTGACAGCTGCACATGTAGACCTTGACATGGTGGCCTaGAATGAAGTGCTCACGGGAGTTACAACAGGAAGCTTCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: LLLLTAAHVDLDMVA*NEVLTGVTTGSFTS Trigger: GGATGTGAAGCTTCCTGTTGTAACTCCCGTGAGCACTTCATTCAAGGCCACCATGTCAAGGTCTACATGTGCAGCTGTCAACAGGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| CDS CAA 72 bp | GTGTCATTGGGGGTGCCATCACTGTCTCAACAGGATTaGATGGTAGCACTACAAGAACCTCACGGGAGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: VSLGVPSLSQQD*MVALQEPHGSY Trigger: GTAACTCCCGTGAGGTTCTTGTAGTGCTACCATCAAATCCTGTTGAGACAGTGATGGCACCCCCAATGACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS CAA 72 bp | TTGACAGCTGCACATGTAGACCTTGACATGGTGGCCTaGAATGAAGTGCTCACGGGAGTTACAACAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LTAAHVDLDMVA*NEVLTGVTTGS Trigger: GCTTCCTGTTGTAACTCCCGTGAGCACTTCATTCAAGGCCACCATGTCAAGGTCTACATGTGCAGCTGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| CDS GCA 72 bp | GGCAACGATCAGGCATTTTGTAGGTGTCACTCCTGCTaGAATGGACAGGGATCCGGAGACAATGAACATTAT | + |
|
Preference number: 6 (lower is better) Translates to: GNDQAFCRCHSC*NGQGSGDNEHY Trigger: ATAATGTTCATTGTCTCCGGATCCCTGTCCATTGCAGCAGGAGTGACACCTACAAAATGCCTGATCGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS CAA 72 bp | ACGACAGTGGAATTCTTCCAAATTAGTTTGCTCCTGTaGACAGCTGCACATGTAGACCTTGACATGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TTVEFFQISLLL*TAAHVDLDMVA Trigger: GGCCACCATGTCAAGGTCTACATGTGCAGCTGTCAACAGGAGCAAACTAATTTGGAAGAATTCCACTGTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| CDS TCA 72 bp | TCACTCCTGCTGCAATGGACAGGGATCCGGAGACAATaGACATTATTGATCCCCAAATTGGGACCATTAACA | + |
|
Preference number: 6 (lower is better) Translates to: SLLLQWTGIRRQ*TLLIPKLGPLT Trigger: TGTTAATGGTCCCAATTTGGGGATCAATAATGTTCATTGTCTCCGGATCCCTGTCCATTGCAGCAGGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||
| CDS CAA 90 bp | TCACAGAGAACGACAGTGGAATTCTTCCAAATTAGTTTGCTCCTGTaGACAGCTGCACATGTAGACCTTGACATGGTGGCCTTGAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: SQRTTVEFFQISLLL*TAAHVDLDMVALNE Trigger: TTCATTCAAGGCCACCATGTCAAGGTCTACATGTGCAGCTGTCAACAGGAGCAAACTAATTTGGAAGAATTCCACTGTCGTTCTCTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| CDS CAA 72 bp | TCACAGAGAACGACAGTGGAATTCTTCCAAATTAGTTaGCTCCTGTTGACAGCTGCACATGTAGACCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SQRTTVEFFQIS*LLLTAAHVDLD Trigger: GTCAAGGTCTACATGTGCAGCTGTCAACAGGAGCAAACTAATTTGGAAGAATTCCACTGTCGTTCTCTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144135.9 |
||
| CDS TCA 72 bp | CTTGGTGATTGTATAATTATACCGAAACGGAAACTGTaGACCCACAGCCACACTGACTACACCCATTATGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGDCIIIPKRKL*THSHTDYTHYA Trigger: AGCATAATGGGTGTAGTCAGTGTGGCTGTGGGTTCACAGTTTCCGTTTCGGTATAATTATACAATCACCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035258.10 |
||