RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MS4A3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024681

Ensembl transcript IDs: ENSMUST00000112984.4, ENSMUST00000186023.7

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCATCCAGATCCAGACCGTGCTCGTGGATTTACAGGAGAGAGAATTaGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGG +
Preference number: 1 (lower is better)
Translates to: SSRSRPCSWIYRREN*DRCQLSCEYFHDRR
Trigger: CCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTAAATCCACGAGCACGGTCTGGATCTGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
3UTR GCA 90 bp TCCAGACCGTGCTCGTGGATTTACAGGAGAGAGAATTGGGACAGATaGCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGCATTT +
Preference number: 1 (lower is better)
Translates to: SRPCSWIYRRENWDR*QLSCEYFHDRRIAF
Trigger: AAATGCAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTAAATCCACGAGCACGGTCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
3UTR CAA 90 bp GGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATaGCATTTCATCTGTTCATGTTCTGCTGAGTTTTCAAATGAGGTT +
Preference number: 2 (lower is better)
Translates to: GTDASFLVNISMTEG*HFICSCSAEFSNEV
Trigger: AACCTCATTTGAAAACTCAGCAGAACATGAACAGATGAAATGCAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
3UTR GCA 72 bp CTAAGGAAATATATTTATTCATCCAGATCCAGACCGTaGTCGTGGATTTACAGGAGAGAGAATTGGGACAGA +
Preference number: 3 (lower is better)
Translates to: LRKYIYSSRSRP*SWIYRRENWDR
Trigger: TCTGTCCCAATTCTCTCTCCTGTAAATCCACGAGCACGGTCTGGATCTGGATGAATAAATATATTTCCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR CCA 90 bp TACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACCACAGCACCCCACAGTaGGTAGCCTGTGTAGAAGGT +
Preference number: 4 (lower is better)
Translates to: YRRENWDRCQLSCEYFHDHSTPQ*VACVEG
Trigger: ACCTTCTACACAGGCTACCCACTGTGGGGTGCTGTG...GTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR CCA 90 bp AGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGACACAGCACCCCACAGTaGGTAGCCTGTGTAGAAGGT +
Preference number: 4 (lower is better)
Translates to: RRENWDRCQLSCEYFHDRHSTPQ*VACVEG
Trigger: ACCTTCTACACAGGCTACCCACTGTGGGGTGCTGTG...TCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR GCA 90 bp GGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGCATTTCAGGAACCCAGGGAAATaGAGACATCAGGTGACGGTG +
Preference number: 4 (lower is better)
Translates to: GTDASFLVNISMTEGLHFRNPGK*RHQVTV
Trigger: CACCGTCACCTGATGTCTGCATTTCCCTGGGTTCCT...GAAATGCAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR CCA 90 bp AGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGGGTGACGGTGAAGATTaGCAACCCTTGAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RENWDRCQLSCEYFHDRRGDGED*QPLKAW
Trigger: CCAGGCTTTCAAGGGTTGCCAATCTTCACCGTCACC...CCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR TCA 90 bp TGGATTTACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCTCTGAAGCTTGGGGCTaGGTGTTCAGGTTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: WIYRRENWDRCQLSCEYFSEAWG*VFRFSE
Trigger: TTCTGAGAACCTGAACACTCAGCCCCAAGCTTCAGA...GAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR GCA 90 bp GGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGCATTTCGTGAAGAAGAAGAAATaGCTGAAGTGGTGGGACACG +
Preference number: 4 (lower is better)
Translates to: GTDASFLVNISMTEGLHFVKKKK*LKWWDT
Trigger: CGTGTCCCACCACTTCAGGCATTTCTTCTTCTTCAC...GAAATGCAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR GCA 90 bp AGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAGTGAAGAAGAAGAAATaGCTGAAGTGGTGGGACACG +
Preference number: 4 (lower is better)
Translates to: RRENWDRCQLSCEYFHDRVKKKK*LKWWDT
Trigger: CGTGTCCCACCACTTCAGGCATTTCTTCTTCTTCAC...TCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR TCA 90 bp TGGATTTACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCAGAAGAAGAAATGCCTaGAGTGGTGGGACACGTGTT +
Preference number: 4 (lower is better)
Translates to: WIYRRENWDRCQLSCEYFRRRNA*SGGTRV
Trigger: AACACGTGTCCCACCACTTCAGGCATTTCTTCTTCT...GAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTAAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR TCA 90 bp TCACCTAAGGAAATATATTTATTCATCCAGATCCAGACCGTGCTCGTGGATTTATCTGAAGCTTGGGGCTaGGTGTTCAGGTTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: SPKEIYLFIQIQTVLVDLSEAWG*VFRFSE
Trigger: TTCTGAGAACCTGAACACTCAGCCCCAAGCTTCAGA...TAAATCCACGAGCACGGTCTGGATCTGGATGAATAAATATATTTCCTTAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR GCA 90 bp GGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGCATTTCATCCCAAAACTGTTTTaGATCAGCATTCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GTDASFLVNISMTEGLHFIPKLF*ISIRVG
Trigger: CCCCACACGAATGCTGATGCAAAACAGTTTTGGGAT...GAAATGCAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR GCA 90 bp ACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAATCCCAAAACTGTTTTaGATCAGCATTCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TGERIGTDASFLVNISMTIPKLF*ISIRVG
Trigger: CCCCACACGAATGCTGATGCAAAACAGTTTTGGGAT...TGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR GCA 90 bp TCCATGACAGAAGGATTGCATTTCATCTGTTCATGTTCTGCTGAGTTTTCAAATAGGAACCCAGGGAAATaGAGACATCAGGTGACGGTG +
Preference number: 4 (lower is better)
Translates to: SMTEGLHFICSCSAEFSNRNPGK*RHQVTV
Trigger: CACCGTCACCTGATGTCTGCATTTCCCTGGGTTCCT...ATTTGAAAACTCAGCAGAACATGAACAGATGAAATGCAATCCTTCTGTCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR CCA 90 bp GGATTTACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCCAACCCTTGAAAGCCTaGGTATTGAATGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: GFTGERIGTDASFLVNISQPLKA*VLNAKC
Trigger: GCATTTGGCATTCAATACCCAGGCTTTCAAGGGTTG...GGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTAAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR TCA 90 bp TCACCTAAGGAAATATATTTATTCATCCAGATCCAGACCGTGCTCGTGGATTTAAGAAGAAGAAATGCCTaGAGTGGTGGGACACGTGTT +
Preference number: 4 (lower is better)
Translates to: SPKEIYLFIQIQTVLVDLRRRNA*SGGTRV
Trigger: AACACGTGTCCCACCACTTCAGGCATTTCTTCTTCT...TAAATCCACGAGCACGGTCTGGATCTGGATGAATAAATATATTTCCTTAGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR GCA 90 bp ACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAAGCCTGGGTATTGAATaGCAAATGCACAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TGERIGTDASFLVNISMTSLGIE*QMHRKE
Trigger: TTCCTTTCTGTGCATTTGGCATTCAATACCCAGGCT...TGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR GCA 90 bp GGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAAGCCTGGGTATTGAATaGCAAATGCACAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GERIGTDASFLVNISMTESLGIE*QMHRKE
Trigger: TTCCTTTCTGTGCATTTGGCATTCAATACCCAGGCT...TTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR CCA 90 bp AGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGCAACCCTTGAAAGCCTaGGTATTGAATGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: RIGTDASFLVNISMTEGLQPLKA*VLNAKC
Trigger: GCATTTGGCATTCAATACCCAGGCTTTCAAGGGTTG...CAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR GCA 90 bp GAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGTATTGAATGCCAAATaGACAGAAAGGAAAACAGTC +
Preference number: 4 (lower is better)
Translates to: ENWDRCQLSCEYFHDRRIVLNAK*TERKTV
Trigger: GACTGTTTTCCTTTCTGTGCATTTGGCATTCAATAC...AATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS CCA 90 bp GAAAAATTCCGAGAGCTAGAATCAGTATTCCATTCAGGATCTGGATaGCCCCGAGGGCTTGCAGTACACCTCGTTGAACATGGCGTGACT +
Preference number: 5 (lower is better)
Translates to: EKFRELESVFHSGSG*PRGLAVHLVEHGVT
Trigger: AGTCACGCCATGTTCAACGAGGTGTACTGCAAGCCCTCGGGGCCATCCAGATCCTGAATGGAATACTGATTCTAGCTCTCGGAATTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS CCA 90 bp GATGAGGAACCCAGGGAAATGCAGACATCAGGTGACGGTGAAGATTaGCAACCCTTGAAAGCCTGGGTATTGAATGCCAAATGCACAGAA +
Preference number: 5 (lower is better)
Translates to: DEEPREMQTSGDGED*QPLKAWVLNAKCTE
Trigger: TTCTGTGCATTTGGCATTCAATACCCAGGCTTTCAAGGGTTGCCAATCTTCACCGTCACCTGATGTCTGCATTTCCCTGGGTTCCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR CAA 90 bp TACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACTATCCCAAAACTGTTTaGCATCAGCATTCGTGTGGG +
Preference number: 5 (lower is better)
Translates to: YRRENWDRCQLSCEYFHDYPKTV*HQHSCG
Trigger: CCCACACGAATGCTGATGCAAAACAGTTTTGGGATA...GTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR CAA 90 bp AGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGTATCCCAAAACTGTTTaGCATCAGCATTCGTGTGGG +
Preference number: 5 (lower is better)
Translates to: RIGTDASFLVNISMTEGLYPKTV*HQHSCG
Trigger: CCCACACGAATGCTGATGCAAAACAGTTTTGGGATA...CAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR CAA 90 bp GGATTTACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCTTGAAAGCCTGGGTATaGAATGCCAAATGCACAGAA +
Preference number: 5 (lower is better)
Translates to: GFTGERIGTDASFLVNISLKAWV*NAKCTE
Trigger: TTCTGTGCATTTGGCATTCAATACCCAGGCTTTCAA...GGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTAAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS-3UTR CAA 90 bp GAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTTTGAAAGCCTGGGTATaGAATGCCAAATGCACAGAA +
Preference number: 5 (lower is better)
Translates to: ENWDRCQLSCEYFHDRRILKAWV*NAKCTE
Trigger: TTCTGTGCATTTGGCATTCAATACCCAGGCTTTCAA...AATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS CCA 72 bp CCCAGGGAAATGCAGACATCAGGTGACGGTGAAGATTaGCAACCCTTGAAAGCCTGGGTATTGAATGCCAAA +
Preference number: 6 (lower is better)
Translates to: PREMQTSGDGED*QPLKAWVLNAK
Trigger: TTTGGCATTCAATACCCAGGCTTTCAAGGGTTGCCAATCTTCACCGTCACCTGATGTCTGCATTTCCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS CAA 90 bp CCCAGGGAAATGCAGACATCAGGTGACGGTGAAGATTGGCAACCCTaGAAAGCCTGGGTATTGAATGCCAAATGCACAGAAAGGAAAACA +
Preference number: 6 (lower is better)
Translates to: PREMQTSGDGEDWQP*KAWVLNAKCTERKT
Trigger: TGTTTTCCTTTCTGTGCATTTGGCATTCAATACCCAGGCTTTCAAGGGTTGCCAATCTTCACCGTCACCTGATGTCTGCATTTCCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS CCA 72 bp TCAGGTGACGGTGAAGATTGGCAACCCTTGAAAGCCTaGGTATTGAATGCCAAATGCACAGAAAGGAAAACA +
Preference number: 6 (lower is better)
Translates to: SGDGEDWQPLKA*VLNAKCTERKT
Trigger: TGTTTTCCTTTCTGTGCATTTGGCATTCAATACCCAGGCTTTCAAGGGTTGCCAATCTTCACCGTCACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS CAA 72 bp AATTGTAGTACTGGCAATGTTTATCCCAAAACTGTTTaGCATCAGCATTCGTGTGGGGTTTCTCCCTGCGGC +
Preference number: 6 (lower is better)
Translates to: NCSTGNVYPKTV*HQHSCGVSPCG
Trigger: GCCGCAGGGAGAAACCCCACACGAATGCTGATGCAAAACAGTTTTGGGATAAACATTGCCAGTACTACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7
CDS CAA 90 bp AACAAATGCAATTGTAGTACTGGCAATGTTTATCCCAAAACTGTTTaGCATCAGCATTCGTGTGGGGTTTCTCCCTGCGGCAACAGTCAA +
Preference number: 6 (lower is better)
Translates to: NKCNCSTGNVYPKTV*HQHSCGVSPCGNSQ
Trigger: TTGACTGTTGCCGCAGGGAGAAACCCCACACGAATGCTGATGCAAAACAGTTTTGGGATAAACATTGCCAGTACTACAATTGCATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112984.4
ENSMUST00000186023.7