Pregenerated sensors for MS4A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024681Ensembl transcript IDs: ENSMUST00000112984.4, ENSMUST00000186023.7
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TCATCCAGATCCAGACCGTGCTCGTGGATTTACAGGAGAGAGAATTaGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGG | + |
Preference number: 1 (lower is better) Translates to: SSRSRPCSWIYRREN*DRCQLSCEYFHDRR Trigger: CCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTAAATCCACGAGCACGGTCTGGATCTGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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3UTR GCA 90 bp | TCCAGACCGTGCTCGTGGATTTACAGGAGAGAGAATTGGGACAGATaGCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGCATTT | + |
Preference number: 1 (lower is better) Translates to: SRPCSWIYRRENWDR*QLSCEYFHDRRIAF Trigger: AAATGCAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTAAATCCACGAGCACGGTCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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3UTR CAA 90 bp | GGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATaGCATTTCATCTGTTCATGTTCTGCTGAGTTTTCAAATGAGGTT | + |
Preference number: 2 (lower is better) Translates to: GTDASFLVNISMTEG*HFICSCSAEFSNEV Trigger: AACCTCATTTGAAAACTCAGCAGAACATGAACAGATGAAATGCAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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3UTR GCA 72 bp | CTAAGGAAATATATTTATTCATCCAGATCCAGACCGTaGTCGTGGATTTACAGGAGAGAGAATTGGGACAGA | + |
Preference number: 3 (lower is better) Translates to: LRKYIYSSRSRP*SWIYRRENWDR Trigger: TCTGTCCCAATTCTCTCTCCTGTAAATCCACGAGCACGGTCTGGATCTGGATGAATAAATATATTTCCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR CCA 90 bp | TACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACCACAGCACCCCACAGTaGGTAGCCTGTGTAGAAGGT | + |
Preference number: 4 (lower is better) Translates to: YRRENWDRCQLSCEYFHDHSTPQ*VACVEG Trigger: ACCTTCTACACAGGCTACCCACTGTGGGGTGCTGTG...GTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR CCA 90 bp | AGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGACACAGCACCCCACAGTaGGTAGCCTGTGTAGAAGGT | + |
Preference number: 4 (lower is better) Translates to: RRENWDRCQLSCEYFHDRHSTPQ*VACVEG Trigger: ACCTTCTACACAGGCTACCCACTGTGGGGTGCTGTG...TCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR GCA 90 bp | GGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGCATTTCAGGAACCCAGGGAAATaGAGACATCAGGTGACGGTG | + |
Preference number: 4 (lower is better) Translates to: GTDASFLVNISMTEGLHFRNPGK*RHQVTV Trigger: CACCGTCACCTGATGTCTGCATTTCCCTGGGTTCCT...GAAATGCAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR CCA 90 bp | AGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGGGTGACGGTGAAGATTaGCAACCCTTGAAAGCCTGG | + |
Preference number: 4 (lower is better) Translates to: RENWDRCQLSCEYFHDRRGDGED*QPLKAW Trigger: CCAGGCTTTCAAGGGTTGCCAATCTTCACCGTCACC...CCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR TCA 90 bp | TGGATTTACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCTCTGAAGCTTGGGGCTaGGTGTTCAGGTTCTCAGAA | + |
Preference number: 4 (lower is better) Translates to: WIYRRENWDRCQLSCEYFSEAWG*VFRFSE Trigger: TTCTGAGAACCTGAACACTCAGCCCCAAGCTTCAGA...GAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTAAATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR GCA 90 bp | GGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGCATTTCGTGAAGAAGAAGAAATaGCTGAAGTGGTGGGACACG | + |
Preference number: 4 (lower is better) Translates to: GTDASFLVNISMTEGLHFVKKKK*LKWWDT Trigger: CGTGTCCCACCACTTCAGGCATTTCTTCTTCTTCAC...GAAATGCAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR GCA 90 bp | AGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAGTGAAGAAGAAGAAATaGCTGAAGTGGTGGGACACG | + |
Preference number: 4 (lower is better) Translates to: RRENWDRCQLSCEYFHDRVKKKK*LKWWDT Trigger: CGTGTCCCACCACTTCAGGCATTTCTTCTTCTTCAC...TCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR TCA 90 bp | TGGATTTACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCAGAAGAAGAAATGCCTaGAGTGGTGGGACACGTGTT | + |
Preference number: 4 (lower is better) Translates to: WIYRRENWDRCQLSCEYFRRRNA*SGGTRV Trigger: AACACGTGTCCCACCACTTCAGGCATTTCTTCTTCT...GAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTAAATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR TCA 90 bp | TCACCTAAGGAAATATATTTATTCATCCAGATCCAGACCGTGCTCGTGGATTTATCTGAAGCTTGGGGCTaGGTGTTCAGGTTCTCAGAA | + |
Preference number: 4 (lower is better) Translates to: SPKEIYLFIQIQTVLVDLSEAWG*VFRFSE Trigger: TTCTGAGAACCTGAACACTCAGCCCCAAGCTTCAGA...TAAATCCACGAGCACGGTCTGGATCTGGATGAATAAATATATTTCCTTAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR GCA 90 bp | GGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGCATTTCATCCCAAAACTGTTTTaGATCAGCATTCGTGTGGGG | + |
Preference number: 4 (lower is better) Translates to: GTDASFLVNISMTEGLHFIPKLF*ISIRVG Trigger: CCCCACACGAATGCTGATGCAAAACAGTTTTGGGAT...GAAATGCAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR GCA 90 bp | ACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAATCCCAAAACTGTTTTaGATCAGCATTCGTGTGGGG | + |
Preference number: 4 (lower is better) Translates to: TGERIGTDASFLVNISMTIPKLF*ISIRVG Trigger: CCCCACACGAATGCTGATGCAAAACAGTTTTGGGAT...TGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR GCA 90 bp | TCCATGACAGAAGGATTGCATTTCATCTGTTCATGTTCTGCTGAGTTTTCAAATAGGAACCCAGGGAAATaGAGACATCAGGTGACGGTG | + |
Preference number: 4 (lower is better) Translates to: SMTEGLHFICSCSAEFSNRNPGK*RHQVTV Trigger: CACCGTCACCTGATGTCTGCATTTCCCTGGGTTCCT...ATTTGAAAACTCAGCAGAACATGAACAGATGAAATGCAATCCTTCTGTCATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR CCA 90 bp | GGATTTACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCCAACCCTTGAAAGCCTaGGTATTGAATGCCAAATGC | + |
Preference number: 4 (lower is better) Translates to: GFTGERIGTDASFLVNISQPLKA*VLNAKC Trigger: GCATTTGGCATTCAATACCCAGGCTTTCAAGGGTTG...GGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTAAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR TCA 90 bp | TCACCTAAGGAAATATATTTATTCATCCAGATCCAGACCGTGCTCGTGGATTTAAGAAGAAGAAATGCCTaGAGTGGTGGGACACGTGTT | + |
Preference number: 4 (lower is better) Translates to: SPKEIYLFIQIQTVLVDLRRRNA*SGGTRV Trigger: AACACGTGTCCCACCACTTCAGGCATTTCTTCTTCT...TAAATCCACGAGCACGGTCTGGATCTGGATGAATAAATATATTTCCTTAGGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR GCA 90 bp | ACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAAGCCTGGGTATTGAATaGCAAATGCACAGAAAGGAA | + |
Preference number: 4 (lower is better) Translates to: TGERIGTDASFLVNISMTSLGIE*QMHRKE Trigger: TTCCTTTCTGTGCATTTGGCATTCAATACCCAGGCT...TGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR GCA 90 bp | GGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAAGCCTGGGTATTGAATaGCAAATGCACAGAAAGGAA | + |
Preference number: 4 (lower is better) Translates to: GERIGTDASFLVNISMTESLGIE*QMHRKE Trigger: TTCCTTTCTGTGCATTTGGCATTCAATACCCAGGCT...TTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR CCA 90 bp | AGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGCAACCCTTGAAAGCCTaGGTATTGAATGCCAAATGC | + |
Preference number: 4 (lower is better) Translates to: RIGTDASFLVNISMTEGLQPLKA*VLNAKC Trigger: GCATTTGGCATTCAATACCCAGGCTTTCAAGGGTTG...CAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR GCA 90 bp | GAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGTATTGAATGCCAAATaGACAGAAAGGAAAACAGTC | + |
Preference number: 4 (lower is better) Translates to: ENWDRCQLSCEYFHDRRIVLNAK*TERKTV Trigger: GACTGTTTTCCTTTCTGTGCATTTGGCATTCAATAC...AATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS CCA 90 bp | GAAAAATTCCGAGAGCTAGAATCAGTATTCCATTCAGGATCTGGATaGCCCCGAGGGCTTGCAGTACACCTCGTTGAACATGGCGTGACT | + |
Preference number: 5 (lower is better) Translates to: EKFRELESVFHSGSG*PRGLAVHLVEHGVT Trigger: AGTCACGCCATGTTCAACGAGGTGTACTGCAAGCCCTCGGGGCCATCCAGATCCTGAATGGAATACTGATTCTAGCTCTCGGAATTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS CCA 90 bp | GATGAGGAACCCAGGGAAATGCAGACATCAGGTGACGGTGAAGATTaGCAACCCTTGAAAGCCTGGGTATTGAATGCCAAATGCACAGAA | + |
Preference number: 5 (lower is better) Translates to: DEEPREMQTSGDGED*QPLKAWVLNAKCTE Trigger: TTCTGTGCATTTGGCATTCAATACCCAGGCTTTCAAGGGTTGCCAATCTTCACCGTCACCTGATGTCTGCATTTCCCTGGGTTCCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR CAA 90 bp | TACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACTATCCCAAAACTGTTTaGCATCAGCATTCGTGTGGG | + |
Preference number: 5 (lower is better) Translates to: YRRENWDRCQLSCEYFHDYPKTV*HQHSCG Trigger: CCCACACGAATGCTGATGCAAAACAGTTTTGGGATA...GTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR CAA 90 bp | AGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTGTATCCCAAAACTGTTTaGCATCAGCATTCGTGTGGG | + |
Preference number: 5 (lower is better) Translates to: RIGTDASFLVNISMTEGLYPKTV*HQHSCG Trigger: CCCACACGAATGCTGATGCAAAACAGTTTTGGGATA...CAATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR CAA 90 bp | GGATTTACAGGAGAGAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCTTGAAAGCCTGGGTATaGAATGCCAAATGCACAGAA | + |
Preference number: 5 (lower is better) Translates to: GFTGERIGTDASFLVNISLKAWV*NAKCTE Trigger: TTCTGTGCATTTGGCATTCAATACCCAGGCTTTCAA...GGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTCTCTCCTGTAAATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS-3UTR CAA 90 bp | GAGAATTGGGACAGATGCCAGCTTTCTTGTGAATATTTCCATGACAGAAGGATTTTGAAAGCCTGGGTATaGAATGCCAAATGCACAGAA | + |
Preference number: 5 (lower is better) Translates to: ENWDRCQLSCEYFHDRRILKAWV*NAKCTE Trigger: TTCTGTGCATTTGGCATTCAATACCCAGGCTTTCAA...AATCCTTCTGTCATGGAAATATTCACAAGAAAGCTGGCATCTGTCCCAATTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS CCA 72 bp | CCCAGGGAAATGCAGACATCAGGTGACGGTGAAGATTaGCAACCCTTGAAAGCCTGGGTATTGAATGCCAAA | + |
Preference number: 6 (lower is better) Translates to: PREMQTSGDGED*QPLKAWVLNAK Trigger: TTTGGCATTCAATACCCAGGCTTTCAAGGGTTGCCAATCTTCACCGTCACCTGATGTCTGCATTTCCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS CAA 90 bp | CCCAGGGAAATGCAGACATCAGGTGACGGTGAAGATTGGCAACCCTaGAAAGCCTGGGTATTGAATGCCAAATGCACAGAAAGGAAAACA | + |
Preference number: 6 (lower is better) Translates to: PREMQTSGDGEDWQP*KAWVLNAKCTERKT Trigger: TGTTTTCCTTTCTGTGCATTTGGCATTCAATACCCAGGCTTTCAAGGGTTGCCAATCTTCACCGTCACCTGATGTCTGCATTTCCCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS CCA 72 bp | TCAGGTGACGGTGAAGATTGGCAACCCTTGAAAGCCTaGGTATTGAATGCCAAATGCACAGAAAGGAAAACA | + |
Preference number: 6 (lower is better) Translates to: SGDGEDWQPLKA*VLNAKCTERKT Trigger: TGTTTTCCTTTCTGTGCATTTGGCATTCAATACCCAGGCTTTCAAGGGTTGCCAATCTTCACCGTCACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS CAA 72 bp | AATTGTAGTACTGGCAATGTTTATCCCAAAACTGTTTaGCATCAGCATTCGTGTGGGGTTTCTCCCTGCGGC | + |
Preference number: 6 (lower is better) Translates to: NCSTGNVYPKTV*HQHSCGVSPCG Trigger: GCCGCAGGGAGAAACCCCACACGAATGCTGATGCAAAACAGTTTTGGGATAAACATTGCCAGTACTACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |
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CDS CAA 90 bp | AACAAATGCAATTGTAGTACTGGCAATGTTTATCCCAAAACTGTTTaGCATCAGCATTCGTGTGGGGTTTCTCCCTGCGGCAACAGTCAA | + |
Preference number: 6 (lower is better) Translates to: NKCNCSTGNVYPKTV*HQHSCGVSPCGNSQ Trigger: TTGACTGTTGCCGCAGGGAGAAACCCCACACGAATGCTGATGCAAAACAGTTTTGGGATAAACATTGCCAGTACTACAATTGCATTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112984.4 ENSMUST00000186023.7 |