Pregenerated sensors for MS4A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024680Ensembl transcript IDs: ENSMUST00000025583.12, ENSMUST00000164792.8, ENSMUST00000186978.7, ENSMUST00000189641.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCTTCTATTCATGGTCTGCTCTCTGGGCACCTTTGCAAATGTTCTaGTCCTCTGCCCACACCCTCTTCAGAGTTAGCATTCATTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: TFYSWSALWAPLQMF*SSAHTLFRVSIHLE Trigger: CTCCAAATGAATGCTAACTCTGAAGAGGGTGTGGGCAGAGGACCAGAACATTTGCAAAGGTGCCCAGAGAGCAGACCATGAATAGAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR CCA 90 bp | GTTTGTTTGTTTTTCCTCACTACCTTCTATTCATGGTCTGCTCTCTaGGCACCTTTGCAAATGTTCTGGTCCTCTGCCCACACCCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: VCLFFLTTFYSWSAL*APLQMFWSSAHTLF Trigger: GAAGAGGGTGTGGGCAGAGGACCAGAACATTTGCAAAGGTGCCCAGAGAGCAGACCATGAATAGAAGGTAGTGAGGAAAAACAAACAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR TCA 90 bp | CCCACTATAGGCATCTGCTGGTTAATGTTCTGTAATATGCTTACCTaGCTTGTTAGGGTTTCTACTTTTGATCCTTACTTTCCCCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: PTIGICWLMFCNMLT*LVRVSTFDPYFPLL Trigger: TAGAAGGGGAAAGTAAGGATCAAAAGTAGAAACCCTAACAAGTCAGGTAAGCATATTACAGAACATTAACCAGCAGATGCCTATAGTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR-3UTR TCA 90 bp | ACTACCTTCTATTCATGGTCTGCTCTCTGGGCACCTTTGCAAATGTTCTGGTCCCGATACCTGTGCAGGTaGATGTACTCATCAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: TTFYSWSALWAPLQMFWSRYLCR*MYSSTR Trigger: TCTGGTTGATGAGTACATTCACCTGCACAGGTATCG...GGACCAGAACATTTGCAAAGGTGCCCAGAGAGCAGACCATGAATAGAAGGTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR-3UTR TCA 90 bp | ACTACCTTCTATTCATGGTCTGCTCTCTGGGCACCTTTGCAAATGTTCTGGTCCTCTCCTTTGGTCCTTTaGTGTAGGATATCATATAGC | + |
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Preference number: 2 (lower is better) Translates to: TTFYSWSALWAPLQMFWSSPLVL*CRISYS Trigger: GCTATATGATATCCTACATCAAAGGACCAAAGGAGA...GGACCAGAACATTTGCAAAGGTGCCCAGAGAGCAGACCATGAATAGAAGGTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR-3UTR CCA 90 bp | TCTAACTCACTATGTAACAGAGGCTGGCCTTGTGCTGAGATTCTAGGCAAACATCTACTACTCACCAATTaGCAAACCACTGAGCGATAC | + |
|
Preference number: 2 (lower is better) Translates to: SNSLCNRGWPCAEILGKHLLLTN*QTTERY Trigger: GTATCGCTCAGTGGTTTGCCAATTGGTGAGTAGTAG...ATGTTTGCCTAGAATCTCAGCACAAGGCCAGCCTCTGTTACATAGTGAGTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR-3UTR GCA 90 bp | TCTAACTCACTATGTAACAGAGGCTGGCCTTGTGCTGAGATTCTAGGCAAACATGATAATGTTCTCTATTaGCTACTACTCACCAATTGG | + |
|
Preference number: 2 (lower is better) Translates to: SNSLCNRGWPCAEILGKHDNVLY*LLLTNW Trigger: CCAATTGGTGAGTAGTAGGCAATAGAGAACATTATC...ATGTTTGCCTAGAATCTCAGCACAAGGCCAGCCTCTGTTACATAGTGAGTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR CAA 90 bp | ACAGTATCCCTGAATGTACCTATCCATCTCACTAGACTGAATGGTTaGATAATGTTCTCTATTGCCTACTACTCACCAATTGGCAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: TVSLNVPIHLTRLNG*IMFSIAYYSPIGKP Trigger: TGGTTTGCCAATTGGTGAGTAGTAGGCAATAGAGAACATTATCAAACCATTCAGTCTAGTGAGATGGATAGGTACATTCAGGGATACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR-3UTR TCA 90 bp | CAATCATTTCTTGTCATTCCCATTGACTACCTTCTAGCTCAAGTCTTCATCAGTACAAGAAAATTGGAGTaGATGATATCCGCAAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: QSFLVIPIDYLLAQVFISTRKLE*MISAKR Trigger: CCTTTTTGCGGATATCATTCACTCCAATTTTCTTGT...ACTGATGAAGACTTGAGCTAGAAGGTAGTCAATGGGAATGACAAGAAATGATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR CCA 72 bp | TTTTTCCTCACTACCTTCTATTCATGGTCTGCTCTCTaGGCACCTTTGCAAATGTTCTGGTCCTCTGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: FFLTTFYSWSAL*APLQMFWSSAH Trigger: GTGGGCAGAGGACCAGAACATTTGCAAAGGTGCCCAGAGAGCAGACCATGAATAGAAGGTAGTGAGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR GCA 72 bp | TTGTTTGTTTTTCCTCACTACCTTCTATTCATGGTCTaGTCTCTGGGCACCTTTGCAAATGTTCTGGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LFVFPHYLLFMV*SLGTFANVLVL Trigger: GAGGACCAGAACATTTGCAAAGGTGCCCAGAGAGCAGACCATGAATAGAAGGTAGTGAGGAAAAACAAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR-3UTR CAA 90 bp | ACTACCTTCTATTCATGGTCTGCTCTCTGGGCACCTTTGCAAATGTTCTGGTCCCTTTCAAGATTATACTaGAATCAGATTGTCCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TTFYSWSALWAPLQMFWSLSRLY*NQIVLV Trigger: GACCAGGACAATCTGATTCAAGTATAATCTTGAAAG...GGACCAGAACATTTGCAAAGGTGCCCAGAGAGCAGACCATGAATAGAAGGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR CCA 72 bp | TTCTCTTGTCTTTCCCAAGCCTACATGCACGGTCTCTaGTGGGTAATTATTTTCGCTTTGTCTAACTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: FSCLSQAYMHGL*WVIIFALSNFS Trigger: GGAAAAGTTAGACAAAGCGAAAATAATTACCCACCAGAGACCGTGCATGTAGGCTTGGGAAAGACAAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR TCA 72 bp | TTACCTGTCCCTTGGACACATGGAGAACACACCAACTaGTCCCAGCAAACAGATTTTTCAACATCTCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: LPVPWTHGEHTN*SQQTDFSTSLF Trigger: AAAAAGAGATGTTGAAAAATCTGTTTGCTGGGATCAGTTGGTGTGTTCTCCATGTGTCCAAGGGACAGGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR-3UTR CAA 90 bp | TCTAACTCACTATGTAACAGAGGCTGGCCTTGTGCTGAGATTCTAGGCAAACATAAGCCAACTTATTCCTaGATGACTTTCCAGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: SNSLCNRGWPCAEILGKHKPTYS*MTFQKR Trigger: TCTTTTCTGGAAAGTCATCAAGGAATAAGTTGGCTT...ATGTTTGCCTAGAATCTCAGCACAAGGCCAGCCTCTGTTACATAGTGAGTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR TCA 72 bp | GGCATCTGCTGGTTAATGTTCTGTAATATGCTTACCTaGCTTGTTAGGGTTTCTACTTTTGATCCTTACTTT | + |
|
Preference number: 3 (lower is better) Translates to: GICWLMFCNMLT*LVRVSTFDPYF Trigger: AAAGTAAGGATCAAAAGTAGAAACCCTAACAAGTCAGGTAAGCATATTACAGAACATTAACCAGCAGATGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR CCA 72 bp | TTTGATCCTTACTTTCCCCTTCTAAGTGTAGGCATGTaGAGTTTGACTGCCTTAGTTCTATCTCAAAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: FDPYFPLLSVGM*SLTALVLSQNN Trigger: ATTATTTTGAGATAGAACTAAGGCAGTCAAACTCCACATGCCTACACTTAGAAGGGGAAAGTAAGGATCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR GCA 72 bp | ATCAAGTTAAATAACTCTGATTTACTGGATAAACACTaGCTGAAGATACATAAGGAGATCACACGCACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: IKLNNSDLLDKH*LKIHKEITRTV Trigger: AACTGTGCGTGTGATCTCCTTATGTATCTTCAGGCAGTGTTTATCCAGTAAATCAGAGTTATTTAACTTGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR TCA 72 bp | CATGTGTTATACACAATCATTTCTTGTCATTCCCATTaGCTACCTTCTAGCTCAAGTCTTCATCAGTTTATT | + |
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Preference number: 3 (lower is better) Translates to: HVLYTIISCHSH*LPSSSSLHQFI Trigger: AATAAACTGATGAAGACTTGAGCTAGAAGGTAGTCAATGGGAATGACAAGAAATGATTGTGTATAACACATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR CAA 72 bp | ACTACCTTCTATTCATGGTCTGCTCTCTGGGCACCTTaGCAAATGTTCTGGTCCTCTGCCCACACCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TTFYSWSALWAP*QMFWSSAHTLF Trigger: GAAGAGGGTGTGGGCAGAGGACCAGAACATTTGCAAAGGTGCCCAGAGAGCAGACCATGAATAGAAGGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS-3UTR GCA 90 bp | TCTAACTCACTATGTAACAGAGGCTGGCCTTGTGCTGAGATTCTAGGCAAACATCTGCTTTGGTGGGGCTaGTTTGGCAGGAGATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNSLCNRGWPCAEILGKHLLWWG*FGRRCF Trigger: GAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAG...ATGTTTGCCTAGAATCTCAGCACAAGGCCAGCCTCTGTTACATAGTGAGTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS-3UTR TCA 90 bp | TCTAACTCACTATGTAACAGAGGCTGGCCTTGTGCTGAGATTCTAGGCAAACATCATCTGGGACTGTGGTaGAAGAAGCCACAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SNSLCNRGWPCAEILGKHHLGLW*KKPQSS Trigger: GCTGCTTTGTGGCTTCTTTCACCACAGTCCCAGATG...ATGTTTGCCTAGAATCTCAGCACAAGGCCAGCCTCTGTTACATAGTGAGTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS-3UTR TCA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGCTGCAGCGATGCTACTaGCAATGTTTGCTCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VKRSTFKIILESDCPGPLLQRCY*QCLLPG Trigger: GCCTGGGAGCAAACATTGTCAGTAGCATCGCTGCAG...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164792.8 |
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| CDS-3UTR CCA 90 bp | CAATCATTTCTTGTCATTCCCATTGACTACCTTCTAGCTCAAGTCTTCATCAGTTTGGTGGGGCTGCTTTaGCAGGAGATGCTTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: QSFLVIPIDYLLAQVFISLVGLL*QEMLPR Trigger: TCTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAA...ACTGATGAAGACTTGAGCTAGAAGGTAGTCAATGGGAATGACAAGAAATGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS-3UTR CCA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGCCATGTCTGCTTTGGTaGGGCTGCTTTGGCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VKRSTFKIILESDCPGPLPCLLW*GCFGRR Trigger: TCTCCTGCCAAAGCAGCCCCACCAAAGCAGACATGG...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 |
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| CDS-3UTR GCA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTCTGCTTTGGTGGGGCTaGTTTGGCAGGAGATGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KRSTFKIILESDCPGPLILLWWG*FGRRCF Trigger: GAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAG...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 |
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| CDS-3UTR GCA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGGCTACTGACAATGTTTaGTCCCAGGCTGCCTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: VKRSTFKIILESDCPGPLATDNV*SQAASH Trigger: GTGAGAGGCAGCCTGGGAGCAAACATTGTCAGTAGC...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164792.8 |
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| CDS-3UTR GCA 90 bp | TCTAACTCACTATGTAACAGAGGCTGGCCTTGTGCTGAGATTCTAGGCAAACATAAACAGAATTTGTGTTaGTCCCAGGAACTCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: SNSLCNRGWPCAEILGKHKQNLC*SQELQL Trigger: GAGTTGGAGTTCCTGGGAGCAACACAAATTCTGTTT...ATGTTTGCCTAGAATCTCAGCACAAGGCCAGCCTCTGTTACATAGTGAGTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS-3UTR CCA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGTTGGTGGGGCTGCTTTaGCAGGAGATGCTTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: VKRSTFKIILESDCPGPLLVGLL*QEMLPR Trigger: TCTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAA...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 |
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| CDS-3UTR TCA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTACACCAGTTCTGTGGTaGAAGAAGCCACAAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KRSTFKIILESDCPGPLITPVLW*KKPQSS Trigger: GCTGCTTTGTGGCTTCTTTCACCACAGAACTGGTGT...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 |
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| CDS-3UTR GCA 90 bp | CAATCATTTCTTGTCATTCCCATTGACTACCTTCTAGCTCAAGTCTTCATCAGTTGGGAGAGCAAGATCTaGTCTGCTCCTATTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: QSFLVIPIDYLLAQVFISWESKI*SAPIFC Trigger: ACAGAAAATAGGAGCAGAGCAGATCTTGCTCTCCCA...ACTGATGAAGACTTGAGCTAGAAGGTAGTCAATGGGAATGACAAGAAATGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS-3UTR GCA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTTGTTTGCTCCCAGGCTaGCTCTCACCAGATACAATG | + |
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Preference number: 4 (lower is better) Translates to: KRSTFKIILESDCPGPLICLLPG*LSPDTM Trigger: CATTGTATCTGGTGAGAGGCAGCCTGGGAGCAAACA...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164792.8 |
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| CDS-3UTR TCA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGAAAAGGCCAGGATGGTaGGAAACAGCATCATCAACA | + |
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Preference number: 4 (lower is better) Translates to: VKRSTFKIILESDCPGPLKRPGW*ETASST Trigger: TGTTGATGATGCTGTTTCTCACCATCCTGGCCTTTT...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 |
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| CDS-3UTR TCA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTAGTTATTGGTCAGATTaGGGATCAGCATGGCGATCC | + |
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Preference number: 4 (lower is better) Translates to: KRSTFKIILESDCPGPLISYWSD*GSAWRS Trigger: GGATCGCCATGCTGATCCTCAATCTGACCAATAACT...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164792.8 |
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| CDS-3UTR GCA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGGAGCAAGATCTGCTCTaGTCCTATTTTCTGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VKRSTFKIILESDCPGPLEQDLL*SYFLCP Trigger: TGGACACAGAAAATAGGAGCAGAGCAGATCTTGCTC...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 |
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| CDS-3UTR GCA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGAACCAGAATTTGTGTTaGTCCCAGGAACTCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: VKRSTFKIILESDCPGPLNQNLC*SQELQL Trigger: GAGTTGGAGTTCCTGGGAGCAACACAAATTCTGGTT...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 |
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| CDS-3UTR CCA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGGGATTCTTGTGGATTTaGGAGAGCAAGATCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VKRSTFKIILESDCPGPLGFLWI*ESKICS Trigger: AGAGCAGATCTTGCTCTCCCAAATCCACAAGAATCC...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 |
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| CDS-3UTR CCA 90 bp | TCATTTCTTGTCATTCCCATTGACTACCTTCTAGCTCAAGTCTTCATCAGTTTAGGATTCTTGTGGATTTaGGAGAGCAAGATCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SFLVIPIDYLLAQVFISLGFLWI*ESKICS Trigger: AGAGCAGATCTTGCTCTCCCAAATCCACAAGAATCC...TAAACTGATGAAGACTTGAGCTAGAAGGTAGTCAATGGGAATGACAAGAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| 3UTR CAA 72 bp | CCTTACTTTCCCCTTCTAAGTGTAGGCATGTGGAGTTaGACTGCCTTAGTTCTATCTCAAAATAATTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PYFPLLSVGMWS*TALVLSQNNSP Trigger: AGGAGAATTATTTTGAGATAGAACTAAGGCAGTCAAACTCCACATGCCTACACTTAGAAGGGGAAAGTAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS-3UTR GCA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTGAGCAAGATCTGCTCTaGTCCTATTTTCTGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: KRSTFKIILESDCPGPLIEQDLL*SYFLCP Trigger: TGGACACAGAAAATAGGAGCAGAGCAGATCTTGCTC...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 |
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| CDS-3UTR GCA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTTGGGAGAGCAAGATCTaGTCTGCTCCTATTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: KRSTFKIILESDCPGPLIWESKI*SAPIFC Trigger: ACAGAAAATAGGAGCAGAGCAGATCTTGCTCTCCCA...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 |
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| CDS-3UTR GCA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTTGCTTTGGCAGGAGATaGTTCCAAGAGTTCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: KRSTFKIILESDCPGPLICFGRR*FQEFNV Trigger: GACATTGAACTCTTGGAAGCATCTCCTGCCAAAGCA...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 |
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| CDS-3UTR CCA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTACTGGAGGATTCTTGTaGATTTGGGAGAGCAAGATC | + |
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Preference number: 4 (lower is better) Translates to: KRSTFKIILESDCPGPLITGGFL*IWESKI Trigger: GATCTTGCTCTCCCAAATCCACAAGAATCCTCCAGT...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 |
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| CDS-3UTR TCA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGTTCTTCATCAAAGTCTaGAACATAGAGTACGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VKRSTFKIILESDCPGPLFFIKV*NIEYGA Trigger: TGCTCCGTACTCTATGTTTCAGACTTTGATGAAGAA...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 |
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| 3UTR CAA 72 bp | CTGAATGTACCTATCCATCTCACTAGACTGAATGGTTaGATAATGTTCTCTATTGCCTACTACTCACCAATT | + |
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Preference number: 4 (lower is better) Translates to: LNVPIHLTRLNG*IMFSIAYYSPI Trigger: AATTGGTGAGTAGTAGGCAATAGAGAACATTATCAAACCATTCAGTCTAGTGAGATGGATAGGTACATTCAG 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS-3UTR TCA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTTTCTTCATCAAAGTCTaGAACATAGAGTACGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: KRSTFKIILESDCPGPLIFFIKV*NIEYGA Trigger: TGCTCCGTACTCTATGTTTCAGACTTTGATGAAGAA...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 |
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| CDS-3UTR GCA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTCTTCGGTTACATTCTTaGAGTTGTTCATATAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: KRSTFKIILESDCPGPLILRLHS*SCSYKR Trigger: TCGCTTATATGAACAACTGCAAGAATGTAACCGAAG...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164792.8 |
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| 3UTR CAA 72 bp | GAGATTCTAGGCAAACATGCCAATCTCTACCAACTTTaGGTAGATATTTACGTACATGTGTTATACACAATC | + |
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Preference number: 4 (lower is better) Translates to: EILGKHANLYQL*VDIYVHVLYTI Trigger: GATTGTGTATAACACATGTACGTAAATATCTACCAAAAGTTGGTAGAGATTGGCATGTTTGCCTAGAATCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS GCA 90 bp | GAAGTTATTGGTCAGATTGAGGATCAGCATGGCGATCCCCGTCCCTaGAGCGATGCTACTGACAATGTTTGCTCCCAGGCTGCCTCTCAC | + |
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Preference number: 5 (lower is better) Translates to: EVIGQIEDQHGDPRP*SDATDNVCSQAASH Trigger: GTGAGAGGCAGCCTGGGAGCAAACATTGTCAGTAGCATCGCTGCAGGGACGGGGATCGCCATGCTGATCCTCAATCTGACCAATAACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164792.8 |
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| CDS GCA 90 bp | GCTCCCAGGAACTCCAACTCTTTCTTCAAAAATGTCCGCCATGTCTaGTTTGGTGGGGCTGCTTTGGCAGGAGATGCTTCCAAGAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: APRNSNSFFKNVRHV*FGGAALAGDASKSS Trigger: TGAACTCTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAGACATGGCGGACATTTTTGAAGAAAGAGTTGGAGTTCCTGGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS CCA 90 bp | CTTTCTTCAAAAATGTCCGCCATGTCTGCTTTGGTGGGGCTGCTTTaGCAGGAGATGCTTCCAAGAGTTCAATGTCAGGTGCACTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LSSKMSAMSALVGLL*QEMLPRVQCQVHWR Trigger: CCTCCAGTGCACCTGACATTGAACTCTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAGACATGGCGGACATTTTTGAAGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS GCA 90 bp | CAACTCTTTCTTCAAAAATGTCCGCCATGTCTGCTTTGGTGGGGCTaGTTTGGCAGGAGATGCTTCCAAGAGTTCAATGTCAGGTGCACT | + |
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Preference number: 5 (lower is better) Translates to: QLFLQKCPPCLLWWG*FGRRCFQEFNVRCT Trigger: AGTGCACCTGACATTGAACTCTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAGACATGGCGGACATTTTTGAAGAAAGAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS CCA 90 bp | AGATGCTTCCAAGAGTTCAATGTCAGGTGCACTGGAGGATTCTTGTaGATTTGGGAGAGCAAGATCTGCTCTGCTCCTATTTTCTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: RCFQEFNVRCTGGFL*IWESKICSAPIFCV Trigger: GACACAGAAAATAGGAGCAGAGCAGATCTTGCTCTCCCAAATCCACAAGAATCCTCCAGTGCACCTGACATTGAACTCTTGGAAGCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS-3UTR CAA 90 bp | ACTACCTTCTATTCATGGTCTGCTCTCTGGGCACCTTTGCAAATGTTCTGGTCCCAAACAGAATTTGTGTaGCTCCCAGGAACTCCAACT | + |
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Preference number: 5 (lower is better) Translates to: TTFYSWSALWAPLQMFWSQTEFV*LPGTPT Trigger: AGTTGGAGTTCCTGGGAGCAACACAAATTCTGTTTG...GGACCAGAACATTTGCAAAGGTGCCCAGAGAGCAGACCATGAATAGAAGGTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS-3UTR CAA 90 bp | CAATCATTTCTTGTCATTCCCATTGACTACCTTCTAGCTCAAGTCTTCATCAGTTTTGGTGGGGCTGCTTaGGCAGGAGATGCTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: QSFLVIPIDYLLAQVFISFGGAA*AGDASK Trigger: CTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAA...ACTGATGAAGACTTGAGCTAGAAGGTAGTCAATGGGAATGACAAGAAATGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS-3UTR CAA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGTTTGGTGGGGCTGCTTaGGCAGGAGATGCTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: VKRSTFKIILESDCPGPLFGGAA*AGDASK Trigger: CTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAA...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 |
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| CDS-3UTR CAA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTTTTGGTGGGGCTGCTTaGGCAGGAGATGCTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: KRSTFKIILESDCPGPLIFGGAA*AGDASK Trigger: CTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAA...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 |
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| CDS TCA 90 bp | AATACACATTTAATTCTTCATAAAGACGATCATCTGGGACTGTGGTaGAAGAAGCCACAAAGCAGCCGTCGTCTTCGGTTACATTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: NTHLILHKDDHLGLW*KKPQSSRRLRLHSD Trigger: ATCTGAATGTAACCGAAGACGACGGCTGCTTTGTGGCTTCTTTCACCACAGTCCCAGATGATCGTCTTTATGAAGAATTAAATGTGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS-3UTR CAA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGCAACCAGAATTTGTGTaGCTCCCAGGAACTCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: VKRSTFKIILESDCPGPLQPEFV*LPGTPT Trigger: AGTTGGAGTTCCTGGGAGCAACACAAATTCTGGTTG...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 |
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| CDS-3UTR CAA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGCAAACCAACCAGAATTaGTGTTGCTCCCAGGAACTC | + |
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Preference number: 5 (lower is better) Translates to: VKRSTFKIILESDCPGPLQTNQN*CCSQEL Trigger: GAGTTCCTGGGAGCAACACAAATTCTGGTTGGTTTG...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 |
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| CDS-3UTR CAA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTCAACCAGAATTTGTGTaGCTCCCAGGAACTCCAACT | + |
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Preference number: 5 (lower is better) Translates to: KRSTFKIILESDCPGPLIQPEFV*LPGTPT Trigger: AGTTGGAGTTCCTGGGAGCAACACAAATTCTGGTTG...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 |
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| CDS-3UTR CAA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTCAAACCAACCAGAATTaGTGTTGCTCCCAGGAACTC | + |
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Preference number: 5 (lower is better) Translates to: KRSTFKIILESDCPGPLIQTNQN*CCSQEL Trigger: GAGTTCCTGGGAGCAACACAAATTCTGGTTGGTTTG...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 |
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| CDS-3UTR CAA 90 bp | GTAAAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGGTACGGAGCAGACAATaGTTCCAAAACAAAGGCATA | + |
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Preference number: 5 (lower is better) Translates to: VKRSTFKIILESDCPGPLVRSRQ*FQNKGI Trigger: TATGCCTTTGTTTTGGAACAATTGTCTGCTCCGTAC...CAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 |
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| CDS-3UTR CAA 90 bp | AAAAGATCAACTTTCAAGATTATACTTGAATCAGATTGTCCTGGTCCCCTGATTGTACGGAGCAGACAATaGTTCCAAAACAAAGGCATA | + |
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Preference number: 5 (lower is better) Translates to: KRSTFKIILESDCPGPLIVRSRQ*FQNKGI Trigger: TATGCCTTTGTTTTGGAACAATTGTCTGCTCCGTAC...AATCAGGGGACCAGGACAATCTGATTCAAGTATAATCTTGAAAGTTGATCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 |
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| CDS GCA 72 bp | GGTCAGATTGAGGATCAGCATGGCGATCCCCGTCCCTaGAGCGATGCTACTGACAATGTTTGCTCCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: GQIEDQHGDPRP*SDATDNVCSQA Trigger: AGCCTGGGAGCAAACATTGTCAGTAGCATCGCTGCAGGGACGGGGATCGCCATGCTGATCCTCAATCTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164792.8 |
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| CDS GCA 72 bp | CCATGTCTGCTTTGGTGGGGCTGCTTTGGCAGGAGATaGTTCCAAGAGTTCAATGTCAGGTGCACTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: PCLLWWGCFGRR*FQEFNVRCTGG Trigger: TCCTCCAGTGCACCTGACATTGAACTCTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAGACATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS CCA 72 bp | AAAATGTCCGCCATGTCTGCTTTGGTGGGGCTGCTTTaGCAGGAGATGCTTCCAAGAGTTCAATGTCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: KMSAMSALVGLL*QEMLPRVQCQV Trigger: CACCTGACATTGAACTCTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAGACATGGCGGACATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS GCA 72 bp | CTTCAAAAATGTCCGCCATGTCTGCTTTGGTGGGGCTaGTTTGGCAGGAGATGCTTCCAAGAGTTCAATGTC | + |
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Preference number: 6 (lower is better) Translates to: LQKCPPCLLWWG*FGRRCFQEFNV Trigger: GACATTGAACTCTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAGACATGGCGGACATTTTTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS GCA 72 bp | AACTCCAACTCTTTCTTCAAAAATGTCCGCCATGTCTaGTTTGGTGGGGCTGCTTTGGCAGGAGATGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: NSNSFFKNVRHV*FGGAALAGDAS Trigger: GGAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAGACATGGCGGACATTTTTGAAGAAAGAGTTGGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS CCA 72 bp | CAACTCTTTCTTCAAAAATGTCCGCCATGTCTGCTTTaGTGGGGCTGCTTTGGCAGGAGATGCTTCCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: QLFLQKCPPCLL*WGCFGRRCFQE Trigger: CTCTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAGACATGGCGGACATTTTTGAAGAAAGAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS CAA 72 bp | AAAAATGTCCGCCATGTCTGCTTTGGTGGGGCTGCTTaGGCAGGAGATGCTTCCAAGAGTTCAATGTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: KNVRHVCFGGAA*AGDASKSSMSG Trigger: ACCTGACATTGAACTCTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAGACATGGCGGACATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS CAA 72 bp | CCAACTCTTTCTTCAAAAATGTCCGCCATGTCTGCTTaGGTGGGGCTGCTTTGGCAGGAGATGCTTCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: PTLSSKMSAMSA*VGLLWQEMLPR Trigger: TCTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAGACATGGCGGACATTTTTGAAGAAAGAGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS CAA 90 bp | CCAGGAACTCCAACTCTTTCTTCAAAAATGTCCGCCATGTCTGCTTaGGTGGGGCTGCTTTGGCAGGAGATGCTTCCAAGAGTTCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: PGTPTLSSKMSAMSA*VGLLWQEMLPRVQC Trigger: ACATTGAACTCTTGGAAGCATCTCCTGCCAAAGCAGCCCCACCAAAGCAGACATGGCGGACATTTTTGAAGAAAGAGTTGGAGTTCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS CAA 72 bp | TTCCAAGAGTTCAATGTCAGGTGCACTGGAGGATTCTaGTGGATTTGGGAGAGCAAGATCTGCTCTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: FQEFNVRCTGGF*WIWESKICSAP Trigger: AGGAGCAGAGCAGATCTTGCTCTCCCAAATCCACAAGAATCCTCCAGTGCACCTGACATTGAACTCTTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS CAA 90 bp | AGGAGATGCTTCCAAGAGTTCAATGTCAGGTGCACTGGAGGATTCTaGTGGATTTGGGAGAGCAAGATCTGCTCTGCTCCTATTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RRCFQEFNVRCTGGF*WIWESKICSAPIFC Trigger: ACAGAAAATAGGAGCAGAGCAGATCTTGCTCTCCCAAATCCACAAGAATCCTCCAGTGCACCTGACATTGAACTCTTGGAAGCATCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS CAA 72 bp | GTTCAATGTCAGGTGCACTGGAGGATTCTTGTGGATTaGGGAGAGCAAGATCTGCTCTGCTCCTATTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VQCQVHWRILVD*GEQDLLCSYFL Trigger: CAGAAAATAGGAGCAGAGCAGATCTTGCTCTCCCAAATCCACAAGAATCCTCCAGTGCACCTGACATTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS CCA 72 bp | TTCAATGTCAGGTGCACTGGAGGATTCTTGTGGATTTaGGAGAGCAAGATCTGCTCTGCTCCTATTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FNVRCTGGFLWI*ESKICSAPIFC Trigger: ACAGAAAATAGGAGCAGAGCAGATCTTGCTCTCCCAAATCCACAAGAATCCTCCAGTGCACCTGACATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000186978.7 ENSMUST00000189641.2 |
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| CDS TCA 72 bp | TTAATTCTTCATAAAGACGATCATCTGGGACTGTGGTaGAAGAAGCCACAAAGCAGCCGTCGTCTTCGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LILHKDDHLGLW*KKPQSSRRLRL Trigger: TAACCGAAGACGACGGCTGCTTTGTGGCTTCTTTCACCACAGTCCCAGATGATCGTCTTTATGAAGAATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186978.7 |
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| CDS GCA 72 bp | AAGCCACAAAGCAGCCGTCGTCTTCGGTTACATTCTTaGAGTTGTTCATATAAGCGAAGTTATTGGTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: KPQSSRRLRLHS*SCSYKRSYWSD Trigger: ATCTGACCAATAACTTCGCTTATATGAACAACTGCAAGAATGTAACCGAAGACGACGGCTGCTTTGTGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164792.8 |
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| CDS CAA 90 bp | GCACTTCTTCATCAAAGTCTGAAACATAGAGTACGGAGCAGACAATaGTTCCAAAACAAAGGCATATCAAACCAACCAGAATTTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALLHQSLKHRVRSRQ*FQNKGISNQPEFVL Trigger: CAACACAAATTCTGGTTGGTTTGATATGCCTTTGTTTTGGAACAATTGTCTGCTCCGTACTCTATGTTTCAGACTTTGATGAAGAAGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000189641.2 |
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| CDS CAA 72 bp | CATCAAAGTCTGAAACATAGAGTACGGAGCAGACAATaGTTCCAAAACAAAGGCATATCAAACCAACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: HQSLKHRVRSRQ*FQNKGISNQPE Trigger: TTCTGGTTGGTTTGATATGCCTTTGTTTTGGAACAATTGTCTGCTCCGTACTCTATGTTTCAGACTTTGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025583.12 ENSMUST00000164792.8 ENSMUST00000189641.2 |
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