Pregenerated sensors for MS4A18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094584Ensembl transcript IDs: ENSMUST00000177684.3
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGATGTTCATCTTGGCCCAGAGGTAATGCCAAAGTCAAAGTCACAGGTGTTTCAGAAATGTCATTGAAGTaGGCATTCTGTCAGCTATTC | + |
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Preference number: 2 (lower is better) Translates to: GCSSWPRGNAKVKVTGVSEMSLK*AFCQLF Trigger: GAATAGCTGACAGAATGCCCACTTCAATGACATTTC...TGAAACACCTGTGACTTTGACTTTGGCATTACCTCTGGGCCAAGATGAACATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| 3UTR TCA 72 bp | GGTAATGCCAAAGTCAAAGTCACAGGTGTTTCAAGGTaGAACAAAGATATTGTTGTAGCAGCGCTTCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: GNAKVKVTGVSR*NKDIVVAALPL Trigger: CAAAGGAAGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACTTTGGCATTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR TCA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTCCACTGGGGAAGGCTTaGGGTCTGTGTTGGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SQSHRCFKVKQRYCCSSAPLGKA*GLCWPG Trigger: CCCGGGCCAACACAGACCTCAAGCCTTCCCCAGTGG...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | GGATGTTCATCTTGGCCCAGAGGTAATGCCAAAGTCAAAGTCACAGGTGTTTCAAATACTGTAGTCCAGTaGGCCCAGCCTGCAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GCSSWPRGNAKVKVTGVSNTVVQ*AQPAGL Trigger: CAGGCCTGCAGGCTGGGCCCACTGGACTACAGTATT...TGAAACACCTGTGACTTTGACTTTGGCATTACCTCTGGGCCAAGATGAACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR GCA 90 bp | TGCCAAAGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCCCAGTGGGCCCAGCCTaGAGGCCTGTTGTTCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: CQSQSHRCFKVKQRYCCSPVGPA*RPVVPA Trigger: CGCTGGAACAACAGGCCTGCAGGCTGGGCCCACTGG...GCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACTTTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR GCA 90 bp | TGCCAAAGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCACTCCTGGTGGAGCCTaGACGCCAGCCATTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: CQSQSHRCFKVKQRYCCSTPGGA*TPAIPA Trigger: AGCAGGAATGGCTGGCGTGCAGGCTCCACCAGGAGT...GCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACTTTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTGTACTGGATTACTCCTaGTGGAGCCTGCACGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SQSHRCFKVKQRYCCSSAVLDYS*WSLHAS Trigger: GCTGGCGTGCAGGCTCCACCAGGAGTAATCCAGTAC...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR TCA 90 bp | AAACAAAGATATTGTTGTAGCAGCGCTTCCTTTGAAATGTCATTGAAGTGGGCACTGGAGCATTGTTGCTaGGGCTGGGTAGGTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: KQRYCCSSASFEMSLKWALEHCC*GWVGGG Trigger: ACCACCACCTACCCAGCCTCAGCAACAATGCTCCAG...TGCCCACTTCAATGACATTTCAAAGGAAGCGCTGCTACAACAATATCTTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTCATTACTGGGGAGGGTaGTCTGAACTGGGATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SQSHRCFKVKQRYCCSSAHYWGG*SELGCW Trigger: CCAGCATCCCAGTTCAGACCACCCTCCCCAGTAATG...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR TCA 90 bp | GGATGTTCATCTTGGCCCAGAGGTAATGCCAAAGTCAAAGTCACAGGTGTTTCAACTTGTTACTTCTGGTaGGTACTGGATTACTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GCSSWPRGNAKVKVTGVSTCYFW*VLDYSW Trigger: CCAGGAGTAATCCAGTACTCACCAGAAGTAACAAGT...TGAAACACCTGTGACTTTGACTTTGGCATTACCTCTGGGCCAAGATGAACATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | TGCCAAAGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCCCCAAAGGCTGCTCATaGCTTCCAGAGACCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: CQSQSHRCFKVKQRYCCSPKGCS*LPETTA Trigger: TGCTGTGGTCTCTGGAAGCCATGAGCAGCCTTTGGG...GCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACTTTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTCTGAGGCTGGGTAGGTaGTGGTTTTTCCCAAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SQSHRCFKVKQRYCCSSALRLGR*WFFPKA Trigger: AGCCTTTGGGAAAAACCACCACCTACCCAGCCTCAG...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTATGACCTGTGGGTTCTaGAAGTTTGCACTCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SQSHRCFKVKQRYCCSSAMTCGF*KFALPG Trigger: CCCAGGGAGTGCAAACTTCCAGAACCCACAGGTCAT...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | AAACAAAGATATTGTTGTAGCAGCGCTTCCTTTGAAATGTCATTGAAGTGGGCAGCGCAGCAGACAGCCTaGCATCCAAAATGTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KQRYCCSSASFEMSLKWAAQQTA*HPKCEA Trigger: AGCCTCACATTTTGGATGCCAGGCTGTCTGCTGCGC...TGCCCACTTCAATGACATTTCAAAGGAAGCGCTGCTACAACAATATCTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | AAACAAAGATATTGTTGTAGCAGCGCTTCCTTTGAAATGTCATTGAAGTGGGCAGCTGGTGGTACTGTTTaGGATGGTGGTGTTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KQRYCCSSASFEMSLKWAAGGTV*DGGVAR Trigger: CCTGGCAACACCACCATCCCAAACAGTACCACCAGC...TGCCCACTTCAATGACATTTCAAAGGAAGCGCTGCTACAACAATATCTTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTGAACTGGGATGCTGGTaGTACTGTTTGGGATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SQSHRCFKVKQRYCCSSAELGCW*YCLGWW Trigger: CCACCATCCCAAACAGTACCACCAGCATCCCAGTTC...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR TCA 90 bp | TGCCAAAGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCCGGGATTCTGGATCATaGCCTGTGGGTTCTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: CQSQSHRCFKVKQRYCCSRDSGS*PVGSGS Trigger: ACTTCCAGAACCCACAGGTCATGATCCAGAATCCCG...GCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACTTTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR TCA 90 bp | GGATGTTCATCTTGGCCCAGAGGTAATGCCAAAGTCAAAGTCACAGGTGTTTCATGTAGAGTTGAGGGTTaGCTGCAGAGAAGATATGAA | + |
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Preference number: 4 (lower is better) Translates to: GCSSWPRGNAKVKVTGVSCRVEG*LQRRYE Trigger: TTCATATCTTCTCTGCAGTCAACCCTCAACTCTACA...TGAAACACCTGTGACTTTGACTTTGGCATTACCTCTGGGCCAAGATGAACATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR GCA 90 bp | TGCCAAAGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCTTGGGATGGTGGTGTTaGCAGGTCCAGTGGTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: CQSQSHRCFKVKQRYCCSLGWWC*QVQWLC Trigger: ACACAACCACTGGACCTGGCAACACCACCATCCCAA...GCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACTTTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | AAACAAAGATATTGTTGTAGCAGCGCTTCCTTTGAAATGTCATTGAAGTGGGCAGTTCCAGCGGGATTCTaGATCATGACCTGTGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: KQRYCCSSASFEMSLKWAVPAGF*IMTCGF Trigger: GAACCCACAGGTCATGATCCAGAATCCCGCTGGAAC...TGCCCACTTCAATGACATTTCAAAGGAAGCGCTGCTACAACAATATCTTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | AAACAAAGATATTGTTGTAGCAGCGCTTCCTTTGAAATGTCATTGAAGTGGGCATACTGTTTGGGATGGTaGTGTTGCCAGGTCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: KQRYCCSSASFEMSLKWAYCLGW*CCQVQW Trigger: CCACTGGACCTGGCAACACCACCATCCCAAACAGTA...TGCCCACTTCAATGACATTTCAAAGGAAGCGCTGCTACAACAATATCTTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR GCA 90 bp | AAACAAAGATATTGTTGTAGCAGCGCTTCCTTTGAAATGTCATTGAAGTGGGCAGTTTTTCCCAAAGGCTaGTCATGGCTTCCAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: KQRYCCSSASFEMSLKWAVFPKG*SWLPET Trigger: GGTCTCTGGAAGCCATGAGCAGCCTTTGGGAAAAAC...TGCCCACTTCAATGACATTTCAAAGGAAGCGCTGCTACAACAATATCTTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTCTGGATCATGACCTGTaGGTTCTGGAAGTTTGCACT | + |
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Preference number: 4 (lower is better) Translates to: SQSHRCFKVKQRYCCSSALDHDL*VLEVCT Trigger: AGTGCAAACTTCCAGAACCCACAGGTCATGATCCAG...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR TCA 90 bp | AAACAAAGATATTGTTGTAGCAGCGCTTCCTTTGAAATGTCATTGAAGTGGGCATATGAAATAGGCCAATaGGGATCTGGATGGCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: KQRYCCSSASFEMSLKWAYEIGQ*GSGWPL Trigger: TAGGGGCCATCCAGATCCTCATTGGCCTATTTCATA...TGCCCACTTCAATGACATTTCAAAGGAAGCGCTGCTACAACAATATCTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR TCA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTCTTTTCAGCCAAGACTaGCAAGGATCCAGAGATGAT | + |
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Preference number: 4 (lower is better) Translates to: SQSHRCFKVKQRYCCSSALFSQD*QGSRDD Trigger: ATCATCTCTGGATCCTTGTCAGTCTTGGCTGAAAAG...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR TCA 90 bp | TGCCAAAGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGGAGAAGATGGAACTaGCAACATTCATGCCAATGC | + |
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Preference number: 4 (lower is better) Translates to: CQSQSHRCFKVKQRYCCSRRRWN*QHSCQC Trigger: GCATTGGCATGAATGTTGTCAGTTCCATCTTCTCCT...GCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACTTTGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR TCA 90 bp | TGCCAAAGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCACTGCAGAGAAGATATaGAATAGGCCAATGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: CQSQSHRCFKVKQRYCCSTAEKI*NRPMRI Trigger: GATCCTCATTGGCCTATTTCATATCTTCTCTGCAGT...GCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACTTTGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR GCA 90 bp | TGCCAAAGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCCAACATTCATGCCAATaGTGCTATTCACCACACAAC | + |
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Preference number: 4 (lower is better) Translates to: CQSQSHRCFKVKQRYCCSQHSCQ*CYSPHN Trigger: GTTGTGTGGTGAATAGCAGCATTGGCATGAATGTTG...GCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACTTTGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | TGCCAAAGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCGCCACCAAATATGGTTaGGAACATTGTCATGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: CQSQSHRCFKVKQRYCCSATKYG*EHCHVL Trigger: CAGAACATGACAATGTTCCCAACCATATTTGGTGGC...GCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACTTTGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | AAACAAAGATATTGTTGTAGCAGCGCTTCCTTTGAAATGTCATTGAAGTGGGCATTCTGGGCTACATCTTaGTATACTTGTTCAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KQRYCCSSASFEMSLKWAFWATS*YTCSRG Trigger: TCCCCTTGAACAAGTATACCAAGATGTAGCCCAGAA...TGCCCACTTCAATGACATTTCAAAGGAAGCGCTGCTACAACAATATCTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CCA 90 bp | AAACAAAGATATTGTTGTAGCAGCGCTTCCTTTGAAATGTCATTGAAGTGGGCATCACCACACAACTGTTaGAATTCTTTTCAGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: KQRYCCSSASFEMSLKWASPHNC*NSFQPR Trigger: TCTTGGCTGAAAAGAATTCCAACAGTTGTGTGGTGA...TGCCCACTTCAATGACATTTCAAAGGAAGCGCTGCTACAACAATATCTTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS GCA 90 bp | CTTGTTCAAGGGGAACATTACTGGGGAGGGTGGTCTGAACTGGGATaGTGGTGGTACTGTTTGGGATGGTGGTGTTGCCAGGTCCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: LVQGEHYWGGWSELG*WWYCLGWWCCQVQW Trigger: CCACTGGACCTGGCAACACCACCATCCCAAACAGTACCACCAGCATCCCAGTTCAGACCACCCTCCCCAGTAATGTTCCCCTTGAACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 90 bp | CAAGGGGAACATTACTGGGGAGGGTGGTCTGAACTGGGATGCTGGTaGTACTGTTTGGGATGGTGGTGTTGCCAGGTCCAGTGGTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: QGEHYWGGWSELGCW*YCLGWWCCQVQWLC Trigger: ACACAACCACTGGACCTGGCAACACCACCATCCCAAACAGTACCACCAGCATCCCAGTTCAGACCACCCTCCCCAGTAATGTTCCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 90 bp | CACTCCCTGGGTTATACTGGAGCATTGTTGCTGAGGCTGGGTAGGTaGTGGTTTTTCCCAAAGGCTGCTCATGGCTTCCAGAGACCACAG | + |
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Preference number: 5 (lower is better) Translates to: HSLGYTGALLLRLGR*WFFPKAAHGFQRPQ Trigger: CTGTGGTCTCTGGAAGCCATGAGCAGCCTTTGGGAAAAACCACCACCTACCCAGCCTCAGCAACAATGCTCCAGTATAACCCAGGGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 90 bp | TCCCTGGGTTATACTGGAGCATTGTTGCTGAGGCTGGGTAGGTGGTaGTTTTTCCCAAAGGCTGCTCATGGCTTCCAGAGACCACAGCAT | + |
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Preference number: 5 (lower is better) Translates to: SLGYTGALLLRLGRW*FFPKAAHGFQRPQH Trigger: ATGCTGTGGTCTCTGGAAGCCATGAGCAGCCTTTGGGAAAAACCACCACCTACCCAGCCTCAGCAACAATGCTCCAGTATAACCCAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 90 bp | ATTACTGGGGAGGGTGGTCTGAACTGGGATGCTGGTGGTACTGTTTaGGATGGTGGTGTTGCCAGGTCCAGTGGTTGTGTTGACTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: ITGEGGLNWDAGGTV*DGGVARSSGCVDCV Trigger: AACACAGTCAACACAACCACTGGACCTGGCAACACCACCATCCCAAACAGTACCACCAGCATCCCAGTTCAGACCACCCTCCCCAGTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS TCA 90 bp | GTTCTGGAAGTTTGCACTCCCTGGGTTATACTGGAGCATTGTTGCTaGGGCTGGGTAGGTGGTGGTTTTTCCCAAAGGCTGCTCATGGCT | + |
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Preference number: 5 (lower is better) Translates to: VLEVCTPWVILEHCC*GWVGGGFSQRLLMA Trigger: AGCCATGAGCAGCCTTTGGGAAAAACCACCACCTACCCAGCCTCAGCAACAATGCTCCAGTATAACCCAGGGAGTGCAAACTTCCAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 90 bp | TTCTTGGGATTAAATTCAGGAAAAGTCATAAAGGACATGTTCCACTaGGGAAGGCTTGAGGTCTGTGTTGGCCCGGGGACAGTGTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: FLGLNSGKVIKDMFH*GRLEVCVGPGTVFR Trigger: CCTGAACACTGTCCCCGGGCCAACACAGACCTCAAGCCTTCCCCAGTGGAACATGTCCTTTATGACTTTTCCTGAATTTAATCCCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CAA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTCAGCCTGCAGGCCTGTaGTTCCAGCGGGATTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: SQSHRCFKVKQRYCCSSAQPAGL*FQRDSG Trigger: TCCAGAATCCCGCTGGAACAACAGGCCTGCAGGCTG...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS TCA 90 bp | TGGTACTGTTTGGGATGGTGGTGTTGCCAGGTCCAGTGGTTGTGTTaGCTGTGTTGCCACCAAATATGGTTGGGAACATTGTCATGTTCT | + |
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Preference number: 5 (lower is better) Translates to: WYCLGWWCCQVQWLC*LCCHQIWLGTLSCS Trigger: AGAACATGACAATGTTCCCAACCATATTTGGTGGCAACACAGTCAACACAACCACTGGACCTGGCAACACCACCATCCCAAACAGTACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CAA 90 bp | GGATGTTCATCTTGGCCCAGAGGTAATGCCAAAGTCAAAGTCACAGGTGTTTCAGGTCCAGTGGTTGTGTaGACTGTGTTGCCACCAAAT | + |
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Preference number: 5 (lower is better) Translates to: GCSSWPRGNAKVKVTGVSGPVVV*TVLPPN Trigger: ATTTGGTGGCAACACAGTCAACACAACCACTGGACC...TGAAACACCTGTGACTTTGACTTTGGCATTACCTCTGGGCCAAGATGAACATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CAA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTTGCTGGTGGTACTGTTaGGGATGGTGGTGTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SQSHRCFKVKQRYCCSSACWWYC*GWWCCQ Trigger: CTGGCAACACCACCATCCCAAACAGTACCACCAGCA...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CAA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTGGTTATACTGGAGCATaGTTGCTGAGGCTGGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: SQSHRCFKVKQRYCCSSAGYTGA*LLRLGR Trigger: CCTACCCAGCCTCAGCAACAATGCTCCAGTATAACC...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CAA 90 bp | TGCCAAAGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCTTTGGGATGGTGGTGTaGCCAGGTCCAGTGGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: CQSQSHRCFKVKQRYCCSFGMVV*PGPVVV Trigger: CACAACCACTGGACCTGGCAACACCACCATCCCAAA...GCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACTTTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CAA 90 bp | TGCCAAAGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCTATACTGGAGCATTGTaGCTGAGGCTGGGTAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: CQSQSHRCFKVKQRYCCSYTGAL*LRLGRW Trigger: CCACCTACCCAGCCTCAGCAACAATGCTCCAGTATA...GCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACTTTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CAA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTGCGGGATCTGGACACTaGTTACTTCTGGTGAGTACT | + |
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Preference number: 5 (lower is better) Translates to: SQSHRCFKVKQRYCCSSAAGSGH*LLLVST Trigger: AGTACTCACCAGAAGTAACAAGTGTCCAGATCCCGC...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CAA 90 bp | AAACAAAGATATTGTTGTAGCAGCGCTTCCTTTGAAATGTCATTGAAGTGGGCATTGAGTGTTGTAGAGTaGAGGGTTGACTGCAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: KQRYCCSSASFEMSLKWALSVVE*RVDCRE Trigger: TTCTCTGCAGTCAACCCTCAACTCTACAACACTCAA...TGCCCACTTCAATGACATTTCAAAGGAAGCGCTGCTACAACAATATCTTTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CAA 90 bp | AAACAAAGATATTGTTGTAGCAGCGCTTCCTTTGAAATGTCATTGAAGTGGGCATTCACCACACAACTGTaGGAATTCTTTTCAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: KQRYCCSSASFEMSLKWAFTTQL*EFFSAK Trigger: CTTGGCTGAAAAGAATTCCAACAGTTGTGTGGTGAA...TGCCCACTTCAATGACATTTCAAAGGAAGCGCTGCTACAACAATATCTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS-3UTR CAA 90 bp | AGTCAAAGTCACAGGTGTTTCAAGGTGAAACAAAGATATTGTTGTAGCAGCGCTATATGGTTGGGAACATaGTCATGTTCTGAAAATGGG | + |
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Preference number: 5 (lower is better) Translates to: SQSHRCFKVKQRYCCSSAIWLGT*SCSENG Trigger: CCCATTTTCAGAACATGACAATGTTCCCAACCATAT...AGCGCTGCTACAACAATATCTTTGTTTCACCTTGAAACACCTGTGACTTTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 72 bp | GGCCCAGCCTGCAGGCCTGTTGTTCCAGCGGGATTCTaGATCATGACCTGTGGGTTCTGGAAGTTTGCACTC | + |
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Preference number: 6 (lower is better) Translates to: GPACRPVVPAGF*IMTCGFWKFAL Trigger: GAGTGCAAACTTCCAGAACCCACAGGTCATGATCCAGAATCCCGCTGGAACAACAGGCCTGCAGGCTGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS TCA 72 bp | CCTGCAGGCCTGTTGTTCCAGCGGGATTCTGGATCATaGCCTGTGGGTTCTGGAAGTTTGCACTCCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PAGLLFQRDSGS*PVGSGSLHSLG Trigger: ACCCAGGGAGTGCAAACTTCCAGAACCCACAGGTCATGATCCAGAATCCCGCTGGAACAACAGGCCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS GCA 72 bp | GGGGAACATTACTGGGGAGGGTGGTCTGAACTGGGATaGTGGTGGTACTGTTTGGGATGGTGGTGTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GEHYWGGWSELG*WWYCLGWWCCQ Trigger: CTGGCAACACCACCATCCCAAACAGTACCACCAGCATCCCAGTTCAGACCACCCTCCCCAGTAATGTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 72 bp | CATTACTGGGGAGGGTGGTCTGAACTGGGATGCTGGTaGTACTGTTTGGGATGGTGGTGTTGCCAGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: HYWGGWSELGCW*YCLGWWCCQVQ Trigger: CTGGACCTGGCAACACCACCATCCCAAACAGTACCACCAGCATCCCAGTTCAGACCACCCTCCCCAGTAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 72 bp | GGAGGGTGGTCTGAACTGGGATGCTGGTGGTACTGTTaGGGATGGTGGTGTTGCCAGGTCCAGTGGTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: GGWSELGCWWYC*GWWCCQVQWLC Trigger: ACACAACCACTGGACCTGGCAACACCACCATCCCAAACAGTACCACCAGCATCCCAGTTCAGACCACCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 72 bp | GAGGGTGGTCTGAACTGGGATGCTGGTGGTACTGTTTaGGATGGTGGTGTTGCCAGGTCCAGTGGTTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: EGGLNWDAGGTV*DGGVARSSGCV Trigger: AACACAACCACTGGACCTGGCAACACCACCATCCCAAACAGTACCACCAGCATCCCAGTTCAGACCACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 90 bp | CAGTGTTCAGGGGATTCTGAGGGTCTCCAGGCGGGATCTGGACACTaGTTACTTCTGGTGAGTACTGGATTACTCCTGGTGGAGCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: QCSGDSEGLQAGSGH*LLLVSTGLLLVEPA Trigger: TGCAGGCTCCACCAGGAGTAATCCAGTACTCACCAGAAGTAACAAGTGTCCAGATCCCGCCTGGAGACCCTCAGAATCCCCTGAACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 72 bp | GGGGATTCTGAGGGTCTCCAGGCGGGATCTGGACACTaGTTACTTCTGGTGAGTACTGGATTACTCCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GDSEGLQAGSGH*LLLVSTGLLLV Trigger: CACCAGGAGTAATCCAGTACTCACCAGAAGTAACAAGTGTCCAGATCCCGCCTGGAGACCCTCAGAATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 72 bp | ACTGGGATGCTGGTGGTACTGTTTGGGATGGTGGTGTaGCCAGGTCCAGTGGTTGTGTTGACTGTGTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TGMLVVLFGMVV*PGPVVVLTVLP Trigger: TGGCAACACAGTCAACACAACCACTGGACCTGGCAACACCACCATCCCAAACAGTACCACCAGCATCCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 90 bp | CCTGTGGGTTCTGGAAGTTTGCACTCCCTGGGTTATACTGGAGCATaGTTGCTGAGGCTGGGTAGGTGGTGGTTTTTCCCAAAGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: PVGSGSLHSLGYTGA*LLRLGRWWFFPKAA Trigger: AGCAGCCTTTGGGAAAAACCACCACCTACCCAGCCTCAGCAACAATGCTCCAGTATAACCCAGGGAGTGCAAACTTCCAGAACCCACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS TCA 72 bp | AAAATGGGCGCAGCAGACAGCCTGGCATCCAAAATGTaGGGCTATGCAGGTGAGGATGAATTCAAGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: KMGAADSLASKM*GYAGEDEFKEG Trigger: GCCCTCCTTGAATTCATCCTCACCTGCATAGCCTCACATTTTGGATGCCAGGCTGTCTGCTGCGCCCATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS TCA 72 bp | ACTTGTTCAAGGGGAACATTACTGGGGAGGGTGGTCTaGACTGGGATGCTGGTGGTACTGTTTGGGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: TCSRGTLLGRVV*TGMLVVLFGMV Trigger: CACCATCCCAAACAGTACCACCAGCATCCCAGTTCAGACCACCCTCCCCAGTAATGTTCCCCTTGAACAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS GCA 72 bp | ACTTCTGGTGAGTACTGGATTACTCCTGGTGGAGCCTaGACGCCAGCCATTCCTGCTGAATACTGTAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: TSGEYWITPGGA*TPAIPAEYCSP Trigger: TGGACTACAGTATTCAGCAGGAATGGCTGGCGTGCAGGCTCCACCAGGAGTAATCCAGTACTCACCAGAAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 72 bp | TTCAAGGGGAACATTACTGGGGAGGGTGGTCTGAACTaGGATGCTGGTGGTACTGTTTGGGATGGTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: FKGNITGEGGLN*DAGGTVWDGGV Trigger: AACACCACCATCCCAAACAGTACCACCAGCATCCCAGTTCAGACCACCCTCCCCAGTAATGTTCCCCTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 90 bp | GTGGGTTCTGGAAGTTTGCACTCCCTGGGTTATACTGGAGCATTGTaGCTGAGGCTGGGTAGGTGGTGGTTTTTCCCAAAGGCTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VGSGSLHSLGYTGAL*LRLGRWWFFPKAAH Trigger: ATGAGCAGCCTTTGGGAAAAACCACCACCTACCCAGCCTCAGCAACAATGCTCCAGTATAACCCAGGGAGTGCAAACTTCCAGAACCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS GCA 72 bp | TGCTCATGGCTTCCAGAGACCACAGCATATGTAGGCTaGATAACTTGGACATTACTGGGGACGGTGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: CSWLPETTAYVG*ITWTLLGTVTA Trigger: TGCTGTCACCGTCCCCAGTAATGTCCAAGTTATGCAGCCTACATATGCTGTGGTCTCTGGAAGCCATGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 72 bp | GTTCCAGCGGGATTCTGGATCATGACCTGTGGGTTCTaGAAGTTTGCACTCCCTGGGTTATACTGGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: VPAGFWIMTCGF*KFALPGLYWSI Trigger: AATGCTCCAGTATAACCCAGGGAGTGCAAACTTCCAGAACCCACAGGTCATGATCCAGAATCCCGCTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 72 bp | GGTATACTTGTTCAAGGGGAACATTACTGGGGAGGGTaGTCTGAACTGGGATGCTGGTGGTACTGTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GILVQGEHYWGG*SELGCWWYCLG Trigger: TCCCAAACAGTACCACCAGCATCCCAGTTCAGACCACCCTCCCCAGTAATGTTCCCCTTGAACAAGTATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 72 bp | GGAAGTTTGCACTCCCTGGGTTATACTGGAGCATTGTaGCTGAGGCTGGGTAGGTGGTGGTTTTTCCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: GSLHSLGYTGAL*LRLGRWWFFPK Trigger: CTTTGGGAAAAACCACCACCTACCCAGCCTCAGCAACAATGCTCCAGTATAACCCAGGGAGTGCAAACTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 72 bp | TCTGGAAGTTTGCACTCCCTGGGTTATACTGGAGCATaGTTGCTGAGGCTGGGTAGGTGGTGGTTTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SGSLHSLGYTGA*LLRLGRWWFFP Trigger: TGGGAAAAACCACCACCTACCCAGCCTCAGCAACAATGCTCCAGTATAACCCAGGGAGTGCAAACTTCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS TCA 72 bp | TTGGGATGGTGGTGTTGCCAGGTCCAGTGGTTGTGTTaGCTGTGTTGCCACCAAATATGGTTGGGAACATTG | + |
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Preference number: 6 (lower is better) Translates to: LGWWCCQVQWLC*LCCHQIWLGTL Trigger: CAATGTTCCCAACCATATTTGGTGGCAACACAGTCAACACAACCACTGGACCTGGCAACACCACCATCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 72 bp | CTTCCAGAGACCACAGCATATGTAGGCTGCATAACTTaGACATTACTGGGGACGGTGACAGCAGACACATTC | + |
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Preference number: 6 (lower is better) Translates to: LPETTAYVGCIT*TLLGTVTADTF Trigger: GAATGTGTCTGCTGTCACCGTCCCCAGTAATGTCCAAGTTATGCAGCCTACATATGCTGTGGTCTCTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 72 bp | GCTTCCAGAGACCACAGCATATGTAGGCTGCATAACTaGGACATTACTGGGGACGGTGACAGCAGACACATT | + |
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Preference number: 6 (lower is better) Translates to: ASRDHSICRLHN*DITGDGDSRHI Trigger: AATGTGTCTGCTGTCACCGTCCCCAGTAATGTCCAAGTTATGCAGCCTACATATGCTGTGGTCTCTGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 90 bp | CTGCTCATGGCTTCCAGAGACCACAGCATATGTAGGCTGCATAACTaGGACATTACTGGGGACGGTGACAGCAGACACATTCTCTTGATT | + |
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Preference number: 6 (lower is better) Translates to: LLMASRDHSICRLHN*DITGDGDSRHILLI Trigger: AATCAAGAGAATGTGTCTGCTGTCACCGTCCCCAGTAATGTCCAAGTTATGCAGCCTACATATGCTGTGGTCTCTGGAAGCCATGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 72 bp | TTAAATTCAGGAAAAGTCATAAAGGACATGTTCCACTaGGGAAGGCTTGAGGTCTGTGTTGGCCCGGGGACA | + |
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Preference number: 6 (lower is better) Translates to: LNSGKVIKDMFH*GRLEVCVGPGT Trigger: TGTCCCCGGGCCAACACAGACCTCAAGCCTTCCCCAGTGGAACATGTCCTTTATGACTTTTCCTGAATTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 72 bp | GTGGTGTTGCCAGGTCCAGTGGTTGTGTTGACTGTGTaGCCACCAAATATGGTTGGGAACATTGTCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: VVLPGPVVVLTV*PPNMVGNIVMF Trigger: GAACATGACAATGTTCCCAACCATATTTGGTGGCAACACAGTCAACACAACCACTGGACCTGGCAACACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 72 bp | TTTGGGATGGTGGTGTTGCCAGGTCCAGTGGTTGTGTaGACTGTGTTGCCACCAAATATGGTTGGGAACATT | + |
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Preference number: 6 (lower is better) Translates to: FGMVVLPGPVVV*TVLPPNMVGNI Trigger: AATGTTCCCAACCATATTTGGTGGCAACACAGTCAACACAACCACTGGACCTGGCAACACCACCATCCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS TCA 72 bp | TTGCCACCAAATATGGTTGGGAACATTGTCATGTTCTaGAAATGGGCGCAGCAGACAGCCTGGCATCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: LPPNMVGNIVMF*KWAQQTAWHPK Trigger: TTTTGGATGCCAGGCTGTCTGCTGCGCCCATTTTCAGAACATGACAATGTTCCCAACCATATTTGGTGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS TCA 72 bp | CACCACACAACTGTTGGAATTCTTTTCAGCCAAGACTaGCAAGGATCCAGAGATGATAAAAGACAGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: HHTTVGILFSQD*QGSRDDKRQAS Trigger: GGAGGCCTGTCTTTTATCATCTCTGGATCCTTGTCAGTCTTGGCTGAAAAGAATTCCAACAGTTGTGTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 72 bp | AGTGGTTGTGTTGACTGTGTTGCCACCAAATATGGTTaGGAACATTGTCATGTTCTGAAAATGGGCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SGCVDCVATKYG*EHCHVLKMGAA Trigger: TGCTGCGCCCATTTTCAGAACATGACAATGTTCCCAACCATATTTGGTGGCAACACAGTCAACACAACCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CCA 72 bp | CATTCATGCCAATGCTGCTATTCACCACACAACTGTTaGAATTCTTTTCAGCCAAGACTGACAAGGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: HSCQCCYSPHNC*NSFQPRLTRIQ Trigger: CTGGATCCTTGTCAGTCTTGGCTGAAAAGAATTCCAACAGTTGTGTGGTGAATAGCAGCATTGGCATGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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| CDS CAA 72 bp | ACATTCATGCCAATGCTGCTATTCACCACACAACTGTaGGAATTCTTTTCAGCCAAGACTGACAAGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: TFMPMLLFTTQL*EFFSAKTDKDP Trigger: TGGATCCTTGTCAGTCTTGGCTGAAAAGAATTCCAACAGTTGTGTGGTGAATAGCAGCATTGGCATGAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177684.3 |
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