Pregenerated sensors for MS4A15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067571Ensembl transcript IDs: ENSMUST00000087923.4, ENSMUST00000144485.2, ENSMUST00000145110.3
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCTGCAGCCTCCTGTCCTAGTAGGTGGGCAGAGCCAGAGTCAATaGCAATCTTCTGTTACAAATAAGGAGAAGGAGGTTCCGGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: PLQPPVLVGGQSQSQ*QSSVTNKEKEVPGW Trigger: CCACCCCGGAACCTCCTTCTCCTTATTTGTAACAGAAGATTGGCATTGACTCTGGCTCTGCCCACCTACTAGGACAGGAGGCTGCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR GCA 90 bp | AGGACAGAGCTGATCTTCGGAGCTAGGAGCCTGGAGGTCAAGCCTTaGTCTGAGCCTCTGAAATGCCAGTCTATTCTGGAACATTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: RTELIFGARSLEVKP*SEPLKCQSILEHSE Trigger: CTCAGAATGTTCCAGAATAGACTGGCATTTCAGAGGCTCAGAGCAAGGCTTGACCTCCAGGCTCCTAGCTCCGAAGATCAGCTCTGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR CCA 90 bp | GGAAATGGATGGAACATGTCACTCAGTGACACAGTGCACATGGCTTaGAGAGTCTCGCTGGGAAACCGCTGCCTTAGAACGGACAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: GNGWNMSLSDTVHMA*RVSLGNRCLRTDKV Trigger: CACTTTGTCCGTTCTAAGGCAGCGGTTTCCCAGCGAGACTCTCCAAGCCATGTGCACTGTGTCACTGAGTGACATGTTCCATCCATTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR-3UTR CCA 90 bp | GTTGGGGGAGTATGGAGTGGTTCAGTCTCCTCTGCAGCCTCCTGTCCTAGTAGGAGGGTGGAGAGGCTCTaGGTAAAGTGGGAAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: VGGVWSGSVSSAASCPSRRVERL*VKWEAW Trigger: CCAGGCTTCCCACTTTACCCAGAGCCTCTCCACCCT...CCTACTAGGACAGGAGGCTGCAGAGGAGACTGAACCACTCCATACTCCCCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR-3UTR CCA 90 bp | GTTGGGGGAGTATGGAGTGGTTCAGTCTCCTCTGCAGCCTCCTGTCCTAGTAGGGTGACACAGTGCACATaGCTTGGAGAGTCTCGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VGGVWSGSVSSAASCPSRVTQCT*LGESRW Trigger: CCAGCGAGACTCTCCAAGCCATGTGCACTGTGTCAC...CCTACTAGGACAGGAGGCTGCAGAGGAGACTGAACCACTCCATACTCCCCCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR-3UTR TCA 90 bp | ACCTCTGCGAAGCCAAGATTTCCCACGATGAGCAGAGGACTGAGGAGGAGTGTATTAGAACGGACAAAGTaGGGGTGGAGAGGCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: TSAKPRFPTMSRGLRRSVLERTK*GWRGSG Trigger: CCCAGAGCCTCTCCACCCTCACTTTGTCCGTTCTAA...TACACTCCTCCTCAGTCCTCTGCTCATCGTGGGAAATCTTGGCTTCGCAGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR-3UTR TCA 90 bp | ACCTCTGCGAAGCCAAGATTTCCCACGATGAGCAGAGGACTGAGGAGGAGTGTAGAACATGTCACTCAGTaGCACAGTGCACATGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: TSAKPRFPTMSRGLRRSVEHVTQ*HSAHGL Trigger: CAAGCCATGTGCACTGTGTCACTGAGTGACATGTTC...TACACTCCTCCTCAGTCCTCTGCTCATCGTGGGAAATCTTGGCTTCGCAGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCGAAGCCAAGATTTCCCACGATGAGCAGAGGACTGAGGAGGAGTGTACGGGAGGAACTAGGAAATaGATGGAACATGTCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: LCEAKISHDEQRTEEECTGGTRK*MEHVTQ Trigger: CTGAGTGACATGTTCCATCCATTTCCTAGTTCCTCC...CGTACACTCCTCCTCAGTCCTCTGCTCATCGTGGGAAATCTTGGCTTCGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR-3UTR CCA 90 bp | AATGCTGGGATTAAAGGCGTGCGCCATCACGCCTTAGTCTTATGTGGTGTAGTTCTTGGAGAGTCTCGCTaGGAAACCGCTGCCTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: NAGIKGVRHHALVLCGVVLGESR*ETAALE Trigger: TTCTAAGGCAGCGGTTTCCCAGCGAGACTCTCCAAG...AACTACACCACATAAGACTAAGGCGTGATGGCGCACGCCTTTAATCCCAGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR-3UTR GCA 90 bp | AATGCTGGGATTAAAGGCGTGCGCCATCACGCCTTAGTCTTATGTGGTGTAGTTAACCTCCGAAACCTCTaGGAAGCCAAGATTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: NAGIKGVRHHALVLCGVVNLRNL*EAKISH Trigger: GTGGGAAATCTTGGCTTCGCAGAGGTTTCGGAGGTT...AACTACACCACATAAGACTAAGGCGTGATGGCGCACGCCTTTAATCCCAGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGTTTCTCTGTGTAGCCCTGACTGTCCTGTCCTGGAACTCACTCTGTAGATTCCGGGTGGGAAAATaGAATCCCAAAGATGTAACA | + |
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Preference number: 2 (lower is better) Translates to: TGFLCVALTVLSWNSLCRFRVGK*NPKDVT Trigger: TGTTACATCTTTGGGATTTCATTTTCCCACCCGGAA...TCTACAGAGTGAGTTCCAGGACAGGACAGTCAGGGCTACACAGAGAAACCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR CCA 72 bp | GGGCACTCCTGCTTTTCAGGCAGGGTTGGGGGAGTATaGAGTGGTTCAGTCTCCTCTGCAGCCTCCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: GHSCFSGRVGGV*SGSVSSAASCP Trigger: AGGACAGGAGGCTGCAGAGGAGACTGAACCACTCCATACTCCCCCAACCCTGCCTGAAAAGCAGGAGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR TCA 72 bp | CATATGTCAGGGCCTGTGAACACTGGGCTGAAGTGGTaGCTCTCAGGGGCACTCCTGCTTTTCAGGCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: HMSGPVNTGLKW*LSGALLLFRQG Trigger: ACCCTGCCTGAAAAGCAGGAGTGCCCCTGAGAGTCACCACTTCAGCCCAGTGTTCACAGGCCCTGACATATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR CCA 72 bp | TGCCTTAGAACGGACAAAGTGAGGGTGGAGAGGCTCTaGGTAAAGTGGGAAGCCTGGACTTCAACCTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: CLRTDKVRVERL*VKWEAWTSTCR Trigger: TCTGCAGGTTGAAGTCCAGGCTTCCCACTTTACCCAGAGCCTCTCCACCCTCACTTTGTCCGTTCTAAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR CCA 72 bp | TGGAACATGTCACTCAGTGACACAGTGCACATGGCTTaGAGAGTCTCGCTGGGAAACCGCTGCCTTAGAACG | + |
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Preference number: 3 (lower is better) Translates to: WNMSLSDTVHMA*RVSLGNRCLRT Trigger: CGTTCTAAGGCAGCGGTTTCCCAGCGAGACTCTCCAAGCCATGTGCACTGTGTCACTGAGTGACATGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR CCA 72 bp | GGTTCAGTCTCCTCTGCAGCCTCCTGTCCTAGTAGGTaGGCAGAGCCAGAGTCAATGCCAATCTTCTGTTAC | + |
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Preference number: 3 (lower is better) Translates to: GSVSSAASCPSR*AEPESMPIFCY Trigger: GTAACAGAAGATTGGCATTGACTCTGGCTCTGCCCACCTACTAGGACAGGAGGCTGCAGAGGAGACTGAACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR GCA 72 bp | CTGATCTTCGGAGCTAGGAGCCTGGAGGTCAAGCCTTaGTCTGAGCCTCTGAAATGCCAGTCTATTCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: LIFGARSLEVKP*SEPLKCQSILE Trigger: TTCCAGAATAGACTGGCATTTCAGAGGCTCAGAGCAAGGCTTGACCTCCAGGCTCCTAGCTCCGAAGATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR CCA 72 bp | ATGGATGGAACATGTCACTCAGTGACACAGTGCACATaGCTTGGAGAGTCTCGCTGGGAAACCGCTGCCTTA | + |
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Preference number: 3 (lower is better) Translates to: MDGTCHSVTQCT*LGESRWETAAL Trigger: TAAGGCAGCGGTTTCCCAGCGAGACTCTCCAAGCCATGTGCACTGTGTCACTGAGTGACATGTTCCATCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR CCA 72 bp | ACGGACAAAGTGAGGGTGGAGAGGCTCTGGGTAAAGTaGGAAGCCTGGACTTCAACCTGCAGAACTTGTAAT | + |
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Preference number: 3 (lower is better) Translates to: TDKVRVERLWVK*EAWTSTCRTCN Trigger: ATTACAAGTTCTGCAGGTTGAAGTCCAGGCTTCCCACTTTACCCAGAGCCTCTCCACCCTCACTTTGTCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR TCA 72 bp | CTAGGAGCCTGGAGGTCAAGCCTTGCTCTGAGCCTCTaGAATGCCAGTCTATTCTGGAACATTCTGAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: LGAWRSSLALSL*NASLFWNILSS Trigger: AGAACTCAGAATGTTCCAGAATAGACTGGCATTTCAGAGGCTCAGAGCAAGGCTTGACCTCCAGGCTCCTAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR CCA 72 bp | TCTTCTGTTACAAATAAGGAGAAGGAGGTTCCGGGGTaGAGAAGAGAAATGCAGGGCTTAGCCAAGAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: SSVTNKEKEVPG*RREMQGLAKRC Trigger: GCACCTCTTGGCTAAGCCCTGCATTTCTCTTCTCCACCCCGGAACCTCCTTCTCCTTATTTGTAACAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR-3UTR CAA 90 bp | CTCTGCGAAGCCAAGATTTCCCACGATGAGCAGAGGACTGAGGAGGAGTGTACGTTTGGAAAGACAGTATaGGAGGAACTAGGAAATGGA | + |
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Preference number: 3 (lower is better) Translates to: LCEAKISHDEQRTEEECTFGKTV*EELGNG Trigger: TCCATTTCCTAGTTCCTCCAATACTGTCTTTCCAAA...CGTACACTCCTCCTCAGTCCTCTGCTCATCGTGGGAAATCTTGGCTTCGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR TCA 72 bp | GGTGGGAAAATGAAATCCCAAAGATGTAACAGCAGATaGCAAAGGACAGAGCTGATCTTCGGAGCTAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: GGKMKSQRCNSR*QRTELIFGARS Trigger: GCTCCTAGCTCCGAAGATCAGCTCTGTCCTTTGTCATCTGCTGTTACATCTTTGGGATTTCATTTTCCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR-3UTR CAA 90 bp | AATGCTGGGATTAAAGGCGTGCGCCATCACGCCTTAGTCTTATGTGGTGTAGTTAGCTTTATGCCTTTTTaGGAAAGACAGTATTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: NAGIKGVRHHALVLCGVVSFMPF*ERQYWR Trigger: CCTCCAATACTGTCTTTCCAAAAAAGGCATAAAGCT...AACTACACCACATAAGACTAAGGCGTGATGGCGCACGCCTTTAATCCCAGCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR CCA 72 bp | TTTGGAAAGACAGTATTGGAGGAACTAGGAAATGGATaGAACATGTCACTCAGTGACACAGTGCACATGGCT | + |
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Preference number: 3 (lower is better) Translates to: FGKTVLEELGNG*NMSLSDTVHMA Trigger: AGCCATGTGCACTGTGTCACTGAGTGACATGTTCCATCCATTTCCTAGTTCCTCCAATACTGTCTTTCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| 3UTR TCA 72 bp | CTAAGCCACGCTGTTTATTTTTCTCCAAAGTATAGATaGTACAAGCCATATGTCAGGGCCTGTGAACACTGG | + |
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Preference number: 3 (lower is better) Translates to: LSHAVYFSPKYR*YKPYVRACEHW Trigger: CCAGTGTTCACAGGCCCTGACATATGGCTTGTATCATCTATACTTTGGAGAAAAATAAACAGCGTGGCTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR CCA 90 bp | TGGGCTGAAGTGGTGACTCTCAGGGGCACTCCTGCTTTTCAGGCAGGGTTGGGGCAGAATGGCTGGAGGTaGGCGGAGGCCGCTGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: WAEVVTLRGTPAFQAGLGQNGWR*AEAAGV Trigger: AACGCCAGCGGCCTCCGCCCACCTCCAGCCATTCTG...CCCCAACCCTGCCTGAAAAGCAGGAGTGCCCCTGAGAGTCACCACTTCAGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR TCA 90 bp | CTCTGCGAAGCCAAGATTTCCCACGATGAGCAGAGGACTGAGGAGGAGTGTACGTGCTGTACCGGCTGCTaGCTCCCCTCTGCCTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: LCEAKISHDEQRTEEECTCCTGC*LPSASA Trigger: CGCAGAGGCAGAGGGGAGTCAGCAGCCGGTACAGCA...CGTACACTCCTCCTCAGTCCTCTGCTCATCGTGGGAAATCTTGGCTTCGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR GCA 90 bp | CGAGACAGGGTTTCTCTGTGTAGCCCTGACTGTCCTGTCCTGGAACTCACTCTGGTAGCTCTGGGCGCCTaGGCCCCCAGCTGTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: RDRVSLCSPDCPVLELTLVALGA*APSCDS Trigger: AGAGTCACAGCTGGGGGCGCAGGCGCCCAGAGCTAC...CAGAGTGAGTTCCAGGACAGGACAGTCAGGGCTACACAGAGAAACCCTGTCTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR CCA 90 bp | ACCTCTGCGAAGCCAAGATTTCCCACGATGAGCAGAGGACTGAGGAGGAGTGTAGGTGGGCAGAATGGCTaGAGGTGGGCGGAGGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: TSAKPRFPTMSRGLRRSVGGQNG*RWAEAA Trigger: AGCGGCCTCCGCCCACCTCCAGCCATTCTGCCCACC...TACACTCCTCCTCAGTCCTCTGCTCATCGTGGGAAATCTTGGCTTCGCAGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR CCA 90 bp | TGGGCTGAAGTGGTGACTCTCAGGGGCACTCCTGCTTTTCAGGCAGGGTTGGGGGAACTGCATGATCCCTaGAGGCTGGCACATGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: WAEVVTLRGTPAFQAGLGELHDP*RLAHGG Trigger: ACCTCCATGTGCCAGCCTCCAGGGATCATGCAGTTC...CCCCAACCCTGCCTGAAAAGCAGGAGTGCCCCTGAGAGTCACCACTTCAGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR CCA 90 bp | TCCTCTGCAGCCTCCTGTCCTAGTAGGTGGGCAGAGCCAGAGTCAATGCCAATCGTCATAGGCAGGAGGTaGAGAGACTGCTGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SSAASCPSRWAEPESMPIVIGRR*RDCWAG Trigger: CCCAGCCCAGCAGTCTCTCCACCTCCTGCCTATGAC...GATTGGCATTGACTCTGGCTCTGCCCACCTACTAGGACAGGAGGCTGCAGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR CCA 90 bp | TCCTCTGCAGCCTCCTGTCCTAGTAGGTGGGCAGAGCCAGAGTCAATGCCAATCATGATCCCTGGAGGCTaGCACATGGAGGTGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SSAASCPSRWAEPESMPIMIPGG*HMEVGR Trigger: TCTGCCCACCTCCATGTGCCAGCCTCCAGGGATCAT...GATTGGCATTGACTCTGGCTCTGCCCACCTACTAGGACAGGAGGCTGCAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR TCA 90 bp | GTTGGGGGAGTATGGAGTGGTTCAGTCTCCTCTGCAGCCTCCTGTCCTAGTAGGACTCTTCGAACTGCATaGTCCCTGGAGGCTGGCACA | + |
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Preference number: 4 (lower is better) Translates to: VGGVWSGSVSSAASCPSRTLRTA*SLEAGT Trigger: TGTGCCAGCCTCCAGGGATCATGCAGTTCGAAGAGT...CCTACTAGGACAGGAGGCTGCAGAGGAGACTGAACCACTCCATACTCCCCCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR CCA 90 bp | TCCTCTGCAGCCTCCTGTCCTAGTAGGTGGGCAGAGCCAGAGTCAATGCCAATCGCTTGGCACCCAAAGTaGGTGGCAATGACAGCGATG | + |
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Preference number: 4 (lower is better) Translates to: SSAASCPSRWAEPESMPIAWHPK*VAMTAM Trigger: CATCGCTGTCATTGCCACCCACTTTGGGTGCCAAGC...GATTGGCATTGACTCTGGCTCTGCCCACCTACTAGGACAGGAGGCTGCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR GCA 90 bp | ACCTCCGAAACCTCTGCGAAGCCAAGATTTCCCACGATGAGCAGAGGACTGAGGAGGAGGTGGAGAGACTaGTGGGCTGGGGATGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: TSETSAKPRFPTMSRGLRRRWRD*WAGDVE Trigger: TTCAACATCCCCAGCCCAGCAGTCTCTCCACCTCCT...CCTCAGTCCTCTGCTCATCGTGGGAAATCTTGGCTTCGCAGAGGTTTCGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR TCA 90 bp | AATGCTGGGATTAAAGGCGTGCGCCATCACGCCTTAGTCTTATGTGGTGTAGTTGGACGCCACCTTCGATaGAGAGCATCCCCAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: NAGIKGVRHHALVLCGVVGRHLR*RASPGG Trigger: GCCACCTGGGGATGCTCTTCATCGAAGGTGGCGTCC...AACTACACCACATAAGACTAAGGCGTGATGGCGCACGCCTTTAATCCCAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR GCA 90 bp | ACAGGGTTTCTCTGTGTAGCCCTGACTGTCCTGTCCTGGAACTCACTCTGTAGATGTCCCCGCGAAGGCTaGCATGGCACTGAGGATGTT | + |
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Preference number: 4 (lower is better) Translates to: TGFLCVALTVLSWNSLCRCPREG*HGTEDV Trigger: AACATCCTCAGTGCCATGGCAGCCTTCGCGGGGACA...TCTACAGAGTGAGTTCCAGGACAGGACAGTCAGGGCTACACAGAGAAACCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR GCA 90 bp | TCCTCTGCAGCCTCCTGTCCTAGTAGGTGGGCAGAGCCAGAGTCAATGCCAATCCTCCTTGGGCATATATaGCACGTTGTCATAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSAASCPSRWAEPESMPILLGHI*HVVIGR Trigger: CCTGCCTATGACAACGTGGCATATATGCCCAAGGAG...GATTGGCATTGACTCTGGCTCTGCCCACCTACTAGGACAGGAGGCTGCAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR CCA 90 bp | ACAGGGTTTCTCTGTGTAGCCCTGACTGTCCTGTCCTGGAACTCACTCTGTAGAAAGAGCATCCCCAGGTaGCCTCGCCGAACCATAAGC | + |
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Preference number: 4 (lower is better) Translates to: TGFLCVALTVLSWNSLCRKSIPR*PRRTIS Trigger: GCTTATGGTTCGGCGAGGCCACCTGGGGATGCTCTT...TCTACAGAGTGAGTTCCAGGACAGGACAGTCAGGGCTACACAGAGAAACCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR CCA 90 bp | ACCTCCGAAACCTCTGCGAAGCCAAGATTTCCCACGATGAGCAGAGGACTGAGGAGGTGGAGAGACTGCTaGGCTGGGGATGTTGAAATC | + |
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Preference number: 4 (lower is better) Translates to: TSETSAKPRFPTMSRGLRRWRDC*AGDVEI Trigger: GATTTCAACATCCCCAGCCCAGCAGTCTCTCCACCT...CCTCAGTCCTCTGCTCATCGTGGGAAATCTTGGCTTCGCAGAGGTTTCGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR CCA 90 bp | ACCTCTGCGAAGCCAAGATTTCCCACGATGAGCAGAGGACTGAGGAGGAGTGTAAACAGGCAACTGGTGTaGTTCCTCTCAGCTGCTACG | + |
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Preference number: 4 (lower is better) Translates to: TSAKPRFPTMSRGLRRSVNRQLV*FLSAAT Trigger: CGTAGCAGCTGAGAGGAACCACACCAGTTGCCTGTT...TACACTCCTCCTCAGTCCTCTGCTCATCGTGGGAAATCTTGGCTTCGCAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR CCA 90 bp | TTCGAGACAGGGTTTCTCTGTGTAGCCCTGACTGTCCTGTCCTGGAACTCACTCCCGTGCCAAAGGCATTaGGTAGGAAAATCACAGATG | + |
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Preference number: 4 (lower is better) Translates to: FETGFLCVALTVLSWNSLPCQRH*VGKSQM Trigger: CATCTGTGATTTTCCTACCCAATGCCTTTGGCACGG...GAGTGAGTTCCAGGACAGGACAGTCAGGGCTACACAGAGAAACCCTGTCTCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR TCA 90 bp | GTCAATGCCAATCTTCTGTTACAAATAAGGAGAAGGAGGTTCCGGGGTGGAGAAAGAACTCCAGGATGGTaGAGATGGTCAACACGGCAA | + |
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Preference number: 4 (lower is better) Translates to: VNANLLLQIRRRRFRGGERTPGW*RWSTRQ Trigger: TTGCCGTGTTGACCATCTTCACCATCCTGGAGTTCT...TTCTCCACCCCGGAACCTCCTTCTCCTTATTTGTAACAGAAGATTGGCATTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS TCA 90 bp | GAATGGCTGGAGGTGGGCGGAGGCCGCTGGCGTTGCTGGGCGGGATaGCAACGAACACACCATTGCGGCTTGCCACGGCTGCTGTACCGG | + |
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Preference number: 5 (lower is better) Translates to: EWLEVGGGRWRCWAG*QRTHHCGLPRLLYR Trigger: CCGGTACAGCAGCCGTGGCAAGCCGCAATGGTGTGTTCGTTGTCATCCCGCCCAGCAACGCCAGCGGCCTCCGCCCACCTCCAGCCATTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145110.3 |
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| CDS TCA 90 bp | AAGATCAGGTGGTTGAGTAGCTCTGGGCGCCTGCGCCCCCAGCTGTaGCTCTTCGAACTGCATGATCCCTGGAGGCTGGCACATGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: KIRWLSSSGRLRPQL*LFELHDPWRLAHGG Trigger: ACCTCCATGTGCCAGCCTCCAGGGATCATGCAGTTCGAAGAGTCACAGCTGGGGGCGCAGGCGCCCAGAGCTACTCAACCACCTGATCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087923.4 ENSMUST00000144485.2 ENSMUST00000145110.3 |
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| CDS GCA 90 bp | GTTGCTGGGCGGGATGACAACGAACACACCATTGCTGGCAGGAGGTaGAGACATCGTGTTCAGAGAGCCGGCTTGCCACGGCTGCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: VAGRDDNEHTIAGRR*RHRVQRAGLPRLLY Trigger: GTACAGCAGCCGTGGCAAGCCGGCTCTCTGAACACGATGTCTGCACCTCCTGCCAGCAATGGTGTGTTCGTTGTCATCCCGCCCAGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144485.2 |
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| CDS CCA 90 bp | AGGTGGCCTCGCCGAACCATAAGCAGGACGCTGCCGAAGCCAAGGTaGATGAGACCGATCAGGATCTGCACCGTCCCTAAAGCTTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: RWPRRTISRTLPKPR*MRPIRICTVPKALG Trigger: ACCCAAAGCTTTAGGGACGGTGCAGATCCTGATCGGTCTCATCCACCTTGGCTTCGGCAGCGTCCTGCTTATGGTTCGGCGAGGCCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087923.4 ENSMUST00000145110.3 |
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| CDS GCA 90 bp | AGCAGGACGCTGCCGAAGCCAAGGTGGATGAGACCGATCAGGATCTaGACCGTCCCTAAAGCTTTGGGTTCTCCGGTCAAGAACGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SRTLPKPRWMRPIRI*TVPKALGSPVKNVS Trigger: GGAGACGTTCTTGACCGGAGAACCCAAAGCTTTAGGGACGGTGCAGATCCTGATCGGTCTCATCCACCTTGGCTTCGGCAGCGTCCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087923.4 ENSMUST00000145110.3 |
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| CDS GCA 90 bp | TCCCAGACTGCTCTTCAACAGGCAACTGGTGTGGTTCCTCTCAGCTaGTACGGAGAGGGACCCAGAGATGATAAAACAAGCTCCTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: SQTALQQATGVVPLS*YGEGPRDDKTSSSP Trigger: TGGGGAGGAGCTTGTTTTATCATCTCTGGGTCCCTCTCCGTAGCAGCTGAGAGGAACCACACCAGTTGCCTGTTGAAGAGCAGTCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS-3UTR CAA 90 bp | ACCTCTGCGAAGCCAAGATTTCCCACGATGAGCAGAGGACTGAGGAGGAGTGTATCCGTGCCAAAGGCATaGGGTAGGAAAATCACAGAT | + |
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Preference number: 5 (lower is better) Translates to: TSAKPRFPTMSRGLRRSVSVPKA*GRKITD Trigger: ATCTGTGATTTTCCTACCCAATGCCTTTGGCACGGA...TACACTCCTCCTCAGTCCTCTGCTCATCGTGGGAAATCTTGGCTTCGCAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS CAA 72 bp | TGGCTGGAGGTGGGCGGAGGCCGCTGGCGTTGCGGCTaGCCACGGCTGCTGTACCGGCTGCTGACTCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: WLEVGGGRWRCG*PRLLYRLLTPL Trigger: GAGGGGAGTCAGCAGCCGGTACAGCAGCCGTGGCAAGCCGCAACGCCAGCGGCCTCCGCCCACCTCCAGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS CCA 72 bp | AGGTGGGCAGAATGGCTGGAGGTGGGCGGAGGCCGCTaGCGTTGCGGCTTGCCACGGCTGCTGTACCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RWAEWLEVGGGR*RCGLPRLLYRL Trigger: CAGCCGGTACAGCAGCCGTGGCAAGCCGCAACGCCAGCGGCCTCCGCCCACCTCCAGCCATTCTGCCCACCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS CAA 72 bp | GGCAGAATGGCTGGAGGTGGGCGGAGGCCGCTGGCGTaGCGGCTTGCCACGGCTGCTGTACCGGCTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: GRMAGGGRRPLA*RLATAAVPAAD Trigger: GTCAGCAGCCGGTACAGCAGCCGTGGCAAGCCGCAACGCCAGCGGCCTCCGCCCACCTCCAGCCATTCTGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS CAA 90 bp | TGGGCAGAATGGCTGGAGGTGGGCGGAGGCCGCTGGCGTTGCGGCTaGCCACGGCTGCTGTACCGGCTGCTGACTCCCCTCTGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: WAEWLEVGGGRWRCG*PRLLYRLLTPLCLC Trigger: GCAGAGGCAGAGGGGAGTCAGCAGCCGGTACAGCAGCCGTGGCAAGCCGCAACGCCAGCGGCCTCCGCCCACCTCCAGCCATTCTGCCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS TCA 72 bp | GAGGTGGGCGGAGGCCGCTGGCGTTGCTGGGCGGGATaGCAACGAACACACCATTGCGGCTTGCCACGGCTG | + |
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Preference number: 6 (lower is better) Translates to: EVGGGRWRCWAG*QRTHHCGLPRL Trigger: CAGCCGTGGCAAGCCGCAATGGTGTGTTCGTTGTCATCCCGCCCAGCAACGCCAGCGGCCTCCGCCCACCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145110.3 |
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| CDS CAA 90 bp | CGGAGGCCGCTGGCGTTGCTGGGCGGGATGACAACGAACACACCATaGCGGCTTGCCACGGCTGCTGTACCGGCTGCTGACTCCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RRPLALLGGMTTNTP*RLATAAVPAADSPL Trigger: CAGAGGGGAGTCAGCAGCCGGTACAGCAGCCGTGGCAAGCCGCAATGGTGTGTTCGTTGTCATCCCGCCCAGCAACGCCAGCGGCCTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145110.3 |
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| CDS GCA 72 bp | CTGGGCGCCTGCGCCCCCAGCTGTGACTCTTCGAACTaGATGATCCCTGGAGGCTGGCACATGGAGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LGACAPSCDSSN*MIPGGWHMEVG Trigger: GCCCACCTCCATGTGCCAGCCTCCAGGGATCATGCAGTTCGAAGAGTCACAGCTGGGGGCGCAGGCGCCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087923.4 ENSMUST00000144485.2 ENSMUST00000145110.3 |
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| CDS CAA 72 bp | GGCAGAATGGCTGGAGGTGGGCGGAGGCCGCTGGCGTaGCTGGGCGGGATGACAACGAACACACCATTGCGG | + |
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Preference number: 6 (lower is better) Translates to: GRMAGGGRRPLA*LGGMTTNTPLR Trigger: CCGCAATGGTGTGTTCGTTGTCATCCCGCCCAGCAACGCCAGCGGCCTCCGCCCACCTCCAGCCATTCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145110.3 |
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| CDS TCA 72 bp | AGAGAGCCGGCTTGCCACGGCTGCTGTACCGGCTGCTaGCTCCCCTCTGCCTCTGCGCTCCCACATTCACAC | + |
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Preference number: 6 (lower is better) Translates to: REPACHGCCTGC*LPSASALPHSH Trigger: GTGTGAATGTGGGAGCGCAGAGGCAGAGGGGAGTCAGCAGCCGGTACAGCAGCCGTGGCAAGCCGGCTCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144485.2 |
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| CDS CAA 72 bp | GGCAGGAGGTGCAGACATCGTGTTCAGAGAGCCGGCTaGCCACGGCTGCTGTACCGGCTGCTGACTCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GRRCRHRVQRAG*PRLLYRLLTPL Trigger: GAGGGGAGTCAGCAGCCGGTACAGCAGCCGTGGCAAGCCGGCTCTCTGAACACGATGTCTGCACCTCCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144485.2 |
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| CDS CAA 72 bp | GGCAGAATGGCTGGAGGTGGGCGGAGGCCGCTGGCGTaGCTGGGCGGGATGACAACGAACACACCATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GRMAGGGRRPLA*LGGMTTNTPLL Trigger: CAGCAATGGTGTGTTCGTTGTCATCCCGCCCAGCAACGCCAGCGGCCTCCGCCCACCTCCAGCCATTCTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144485.2 |
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| CDS CAA 72 bp | CTGGCGTTGCTGGGCGGGATGACAACGAACACACCATaGCGGCTTGCCACGGCTGCTGTACCGGCTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LALLGGMTTNTP*RLATAAVPAAD Trigger: GTCAGCAGCCGGTACAGCAGCCGTGGCAAGCCGCAATGGTGTGTTCGTTGTCATCCCGCCCAGCAACGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145110.3 |
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| CDS CAA 90 bp | ACCATTGCTGGCAGGAGGTGCAGACATCGTGTTCAGAGAGCCGGCTaGCCACGGCTGCTGTACCGGCTGCTGACTCCCCTCTGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TIAGRRCRHRVQRAG*PRLLYRLLTPLCLC Trigger: GCAGAGGCAGAGGGGAGTCAGCAGCCGGTACAGCAGCCGTGGCAAGCCGGCTCTCTGAACACGATGTCTGCACCTCCTGCCAGCAATGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144485.2 |
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| CDS CAA 90 bp | CGGAGGCCGCTGGCGTTGCTGGGCGGGATGACAACGAACACACCATaGCTGGCAGGAGGTGCAGACATCGTGTTCAGAGAGCCGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: RRPLALLGGMTTNTP*LAGGADIVFREPAC Trigger: GCAAGCCGGCTCTCTGAACACGATGTCTGCACCTCCTGCCAGCAATGGTGTGTTCGTTGTCATCCCGCCCAGCAACGCCAGCGGCCTCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144485.2 |
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| CDS CCA 72 bp | AAGGGGACGCCACCTTCGATGAAGAGCATCCCCAGGTaGCCTCGCCGAACCATAAGCAGGACGCTGCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: KGTPPSMKSIPR*PRRTISRTLPK Trigger: CTTCGGCAGCGTCCTGCTTATGGTTCGGCGAGGCCACCTGGGGATGCTCTTCATCGAAGGTGGCGTCCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087923.4 ENSMUST00000145110.3 |
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| CDS GCA 72 bp | CGGGATGACAACGAACACACCATTGCTGGCAGGAGGTaGAGACATCGTGTTCAGAGAGCCGGCTTGCCACGG | + |
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Preference number: 6 (lower is better) Translates to: RDDNEHTIAGRR*RHRVQRAGLPR Trigger: CCGTGGCAAGCCGGCTCTCTGAACACGATGTCTGCACCTCCTGCCAGCAATGGTGTGTTCGTTGTCATCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144485.2 |
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| CDS CCA 72 bp | TCCGGTCAAGAACGTCTCCATTGGTCTAAGATCAGGTaGTTGAGTAGCTCTGGGCGCCTGCGCCCCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SGQERLHWSKIR*LSSSGRLRPQL Trigger: CAGCTGGGGGCGCAGGCGCCCAGAGCTACTCAACCACCTGATCTTAGACCAATGGAGACGTTCTTGACCGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087923.4 ENSMUST00000144485.2 ENSMUST00000145110.3 |
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| CDS TCA 72 bp | GAAGAATGGCTGTCCCCGCGAAGGCTGCCATGGCACTaGGGATGTTGGTTCCCAGACTGCTCTTCAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: EEWLSPRRLPWH*GCWFPDCSSTG Trigger: GCCTGTTGAAGAGCAGTCTGGGAACCAACATCCTCAGTGCCATGGCAGCCTTCGCGGGGACAGCCATTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS CCA 72 bp | CGCCGAACCATAAGCAGGACGCTGCCGAAGCCAAGGTaGATGAGACCGATCAGGATCTGCACCGTCCCTAAA | + |
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Preference number: 6 (lower is better) Translates to: RRTISRTLPKPR*MRPIRICTVPK Trigger: TTTAGGGACGGTGCAGATCCTGATCGGTCTCATCCACCTTGGCTTCGGCAGCGTCCTGCTTATGGTTCGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087923.4 ENSMUST00000145110.3 |
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| CDS CAA 72 bp | CTGGCGTTGCTGGGCGGGATGACAACGAACACACCATaGCTGGCAGGAGGTGCAGACATCGTGTTCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LALLGGMTTNTP*LAGGADIVFRE Trigger: CTCTCTGAACACGATGTCTGCACCTCCTGCCAGCAATGGTGTGTTCGTTGTCATCCCGCCCAGCAACGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144485.2 |
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| CDS CAA 90 bp | AGAAGAATGGCTGTCCCCGCGAAGGCTGCCATGGCACTGAGGATGTaGGTTCCCAGACTGCTCTTCAACAGGCAACTGGTGTGGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RRMAVPAKAAMALRM*VPRLLFNRQLVWFL Trigger: GAGGAACCACACCAGTTGCCTGTTGAAGAGCAGTCTGGGAACCAACATCCTCAGTGCCATGGCAGCCTTCGCGGGGACAGCCATTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS GCA 72 bp | CTGCCGAAGCCAAGGTGGATGAGACCGATCAGGATCTaGACCGTCCCTAAAGCTTTGGGTTCTCCGGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LPKPRWMRPIRI*TVPKALGSPVK Trigger: CTTGACCGGAGAACCCAAAGCTTTAGGGACGGTGCAGATCCTGATCGGTCTCATCCACCTTGGCTTCGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087923.4 ENSMUST00000145110.3 |
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| CDS CCA 72 bp | TTGGTTCCCAGACTGCTCTTCAACAGGCAACTGGTGTaGTTCCTCTCAGCTGCTACGGAGAGGGACCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LVPRLLFNRQLV*FLSAATERDPE Trigger: CTCTGGGTCCCTCTCCGTAGCAGCTGAGAGGAACCACACCAGTTGCCTGTTGAAGAGCAGTCTGGGAACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS CCA 72 bp | GGATGTTGGTTCCCAGACTGCTCTTCAACAGGCAACTaGTGTGGTTCCTCTCAGCTGCTACGGAGAGGGACC | + |
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Preference number: 6 (lower is better) Translates to: GCWFPDCSSTGN*CGSSQLLRRGT Trigger: GGTCCCTCTCCGTAGCAGCTGAGAGGAACCACACCAGTTGCCTGTTGAAGAGCAGTCTGGGAACCAACATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS GCA 72 bp | ATATGCCACGTTGTCATAGGCAGGAGGTGGAGAGACTaGTGGGCTGGGGATGTTGAAATCCGTGCCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: ICHVVIGRRWRD*WAGDVEIRAKG Trigger: GCCTTTGGCACGGATTTCAACATCCCCAGCCCAGCAGTCTCTCCACCTCCTGCCTATGACAACGTGGCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS CCA 72 bp | CTTGGGCATATATGCCACGTTGTCATAGGCAGGAGGTaGAGAGACTGCTGGGCTGGGGATGTTGAAATCCGT | + |
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Preference number: 6 (lower is better) Translates to: LGHICHVVIGRR*RDCWAGDVEIR Trigger: ACGGATTTCAACATCCCCAGCCCAGCAGTCTCTCCACCTCCTGCCTATGACAACGTGGCATATATGCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS GCA 72 bp | GCTCTTCAACAGGCAACTGGTGTGGTTCCTCTCAGCTaGTACGGAGAGGGACCCAGAGATGATAAAACAAGC | + |
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Preference number: 6 (lower is better) Translates to: ALQQATGVVPLS*YGEGPRDDKTS Trigger: GCTTGTTTTATCATCTCTGGGTCCCTCTCCGTAGCAGCTGAGAGGAACCACACCAGTTGCCTGTTGAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087923.4 |
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| CDS CAA 90 bp | CCAAGGTGGATGAGACCGATCAGGATCTGCACCGTCCCTAAAGCTTaGGGTTCTCCGGTCAAGAACGTCTCCATTGGTCTAAGATCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PRWMRPIRICTVPKA*GSPVKNVSIGLRSG Trigger: ACCTGATCTTAGACCAATGGAGACGTTCTTGACCGGAGAACCCAAAGCTTTAGGGACGGTGCAGATCCTGATCGGTCTCATCCACCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087923.4 ENSMUST00000144485.2 ENSMUST00000145110.3 |
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| CDS CAA 72 bp | ATGAGACCGATCAGGATCTGCACCGTCCCTAAAGCTTaGGGTTCTCCGGTCAAGAACGTCTCCATTGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: MRPIRICTVPKA*GSPVKNVSIGL Trigger: TAGACCAATGGAGACGTTCTTGACCGGAGAACCCAAAGCTTTAGGGACGGTGCAGATCCTGATCGGTCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087923.4 ENSMUST00000144485.2 ENSMUST00000145110.3 |
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