Pregenerated sensors for MS4A10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024731Ensembl transcript IDs: ENSMUST00000072748.13, ENSMUST00000190246.2, ENSMUST00000191343.7
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGAACTCAGTCTTTATTaGGAAAGTCTAGTAGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: VTPVSSPESSQWEAGKDLELSLY*ESLVVL Trigger: TAAGACTACTAGACTTTCCCAATAAAGACTGAGTTC...CAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| 3UTR-3UTR CAA 90 bp | AAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTGGAACTCAGTCTTTATaGGGAAAGTCTAGTAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: KSRLCHHRSPANGRQGRTGTQSL*GKSSSL Trigger: AAGACTACTAGACTTTCCCAATAAAGACTGAGTTCC...AGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR TCA 90 bp | CACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGCAGATCTCCAGGAAGGTaGAGCAGAACAGGGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HACVITGVQPMGGREGLGRSPGR*SRTGSA Trigger: AGCTGACCCTGTTCTGCTTCACCTTCCTGGAGATCT...GCCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR TCA 90 bp | AAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTAGAGGTCCTTGGCAATaGCAAAGAAGCCGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: KSRLCHHRSPANGRQGRTRGPWQ*QRSRPV Trigger: CACTGGCCGGCTTCTTTGTCATTGCCAAGGACCTCT...AGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR TCA 90 bp | GCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGCATTTCATCCTATAGGCTGTaGTGGCTGTGGACCCCGACA | + |
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Preference number: 4 (lower is better) Translates to: ACVITGVQPMGGREGLGISSYRL*WLWTPT Trigger: TGTCGGGGTCCACAGCCATCACAGCCTATAGGATGA...AATGCCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR GCA 90 bp | GCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGAGCAGGTCCTAGGTTCTaGCATCGTGAGACTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ASHACVITGVQPMGGREGAGPRF*HRETSP Trigger: TGGAGAAGTCTCACGATGGCAGAACCTAGGACCTGC...TCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGACTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CCA 90 bp | AGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTACTTTCTGTGCAGGCTaGGCAGGTCCTAGGTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SHACVITGVQPMGGREGLTFCAG*AGPRFC Trigger: GCAGAACCTAGGACCTGCCCAGCCTGCACAGAAAGT...AAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CCA 90 bp | TCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGATGTCACTGTTGTCATaGCCGCCATCCCTGCAACGA | + |
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Preference number: 4 (lower is better) Translates to: SRLCHHRSPANGRQGRTWMSLLS*PPSLQR Trigger: TCGTTGCAGGGATGGCGGCCATGACAACAGTGACAT...CCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR GCA 90 bp | GCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGAAGGGCTTTCTCAAGGTaGCCATCTGGAACCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: ASHACVITGVQPMGGREGRAFSR*PSGTRF Trigger: AAACCTGGTTCCAGATGGGCACCTTGAGAAAGCCCT...TCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGACTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CCA 90 bp | TGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGTCTCCAGATTGGCCATaGAAAAGGACCCTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CKSRLCHHRSPANGRQGRSPDWP*KRTLQE Trigger: TTCCTGGAGGGTCCTTTTCCATGGCCAATCTGGAGA...CCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGACTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR CCA 90 bp | ACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGCATCTCCAGATTGGCCATaGAAAAGGACCCTCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: TPVSSPESSQWEAGKDLASPDWP*KRTLQE Trigger: TTCCTGGAGGGTCCTTTTCCATGGCCAATCTGGAGA...TGCCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR CCA 90 bp | TCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGGTATGGTCTCCAGATTaGCCATGGAAAAGGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: SRLCHHRSPANGRQGRTWVWSPD*PWKRTL Trigger: GAGGGTCCTTTTCCATGGCCAATCTGGAGACCATAC...CCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR CCA 90 bp | CAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACGTATGGTCTCCAGATTaGCCATGGAAAAGGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: QVTPVSSPESSQWEAGKDVWSPD*PWKRTL Trigger: GAGGGTCCTTTTCCATGGCCAATCTGGAGACCATAC...GTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR TCA 90 bp | TCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGAAAGCAATGGCGATGTaGAAGCCACCCAACTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SRLCHHRSPANGRQGRTWKAMAM*KPPNFC Trigger: ACAGAAGTTGGGTGGCTTTCACATCGCCATTGCTTT...CCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072748.13 |
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| CDS-3UTR CCA 90 bp | GCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGCATTTCTCCAGATTGGCCATaGAAAAGGACCCTCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: ACVITGVQPMGGREGLGISPDWP*KRTLQE Trigger: TTCCTGGAGGGTCCTTTTCCATGGCCAATCTGGAGA...AATGCCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR GCA 90 bp | AGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTACCAAAGGCCAAGTGTaGAAAAGCAATGGCGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHACVITGVQPMGGREGLTKGQV*KSNGDV Trigger: CACATCGCCATTGCTTTTGCACACTTGGCCTTTGGT...AAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072748.13 |
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| CDS-3UTR TCA 90 bp | TGGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAGAGGTCCTTGGCAATaGCAAAGAAGCCGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: WLCIYLCKSRLCHHRSPARGPWQ*QRSRPV Trigger: CACTGGCCGGCTTCTTTGTCATTGCCAAGGACCTCT...GGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR CCA 90 bp | GGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAACTTTCTGTGCAGGCTaGGCAGGTCCTAGGTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: GYAFICASHACVITGVQPTFCAG*AGPRFC Trigger: GCAGAACCTAGGACCTGCCCAGCCTGCACAGAAAGT...TGGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR TCA 90 bp | GTGGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCAGATCTCCAGGAAGGTaGAGCAGAACAGGGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVMHLFVQVTPVSSPESSRSPGR*SRTGSA Trigger: AGCTGACCCTGTTCTGCTTCACCTTCCTGGAGATCT...GCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR TCA 90 bp | AGTGGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGTCATCCTATAGGCTGTaGTGGCTGTGGACCCCGACA | + |
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Preference number: 4 (lower is better) Translates to: SGYAFICASHACVITGVQSSYRL*WLWTPT Trigger: TGTCGGGGTCCACAGCCATCACAGCCTATAGGATGA...CTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR TCA 90 bp | ATAGTGGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGAGGTCCTTGGCAATaGCAAAGAAGCCGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: IVVMHLFVQVTPVSSPESRGPWQ*QRSRPV Trigger: CACTGGCCGGCTTCTTTGTCATTGCCAAGGACCTCT...GGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACCACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR TCA 90 bp | AGTGGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGAGATCTCCAGGAAGGTaGAGCAGAACAGGGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SGYAFICASHACVITGVQRSPGR*SRTGSA Trigger: AGCTGACCCTGTTCTGCTTCACCTTCCTGGAGATCT...CTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR TCA 90 bp | GCAGGGAAGGACTTGGCATTGCAGGAACTCAGTCTTTATTGGGAAAGTCTAGTATCATCCTATAGGCTGTaGTGGCTGTGGACCCCGACA | + |
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Preference number: 4 (lower is better) Translates to: AGKDLALQELSLYWESLVSSYRL*WLWTPT Trigger: TGTCGGGGTCCACAGCCATCACAGCCTATAGGATGA...TACTAGACTTTCCCAATAAAGACTGAGTTCCTGCAATGCCAAGTCCTTCCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CCA 90 bp | GTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAAATGTCACTGTTGTCATaGCCGCCATCCCTGCAACGA | + |
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Preference number: 4 (lower is better) Translates to: VMHLFVQVTPVSSPESSQMSLLS*PPSLQR Trigger: TCGTTGCAGGGATGGCGGCCATGACAACAGTGACAT...TTGGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CCA 90 bp | ATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGTATGGTCTCCAGATTaGCCATGGAAAAGGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: MHLFVQVTPVSSPESSQWVWSPD*PWKRTL Trigger: GAGGGTCCTTTTCCATGGCCAATCTGGAGACCATAC...CCATTGGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| 3UTR CAA 72 bp | GAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGCATaGCAGGAACTCAGTCTTTATTGGGAAAGTCTAGTA | + |
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Preference number: 4 (lower is better) Translates to: ESSQWEAGKDLA*QELSLYWESLV Trigger: TACTAGACTTTCCCAATAAAGACTGAGTTCCTGCAATGCCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR TCA 90 bp | AGTGGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAGGTGCAGATTCTTaGCTGTGGAGATCAAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SGYAFICASHACVITGVQPGADS*LWRSSS Trigger: GCTACTTGATCTCCACAGTCAAGAATCTGCACCTGG...CTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072748.13 |
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| CDS-3UTR GCA 90 bp | TTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGCAGGTCCTAGGTTCTaGCATCGTGAGACTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LCIYLCKSRLCHHRSPANAGPRF*HRETSP Trigger: TGGAGAAGTCTCACGATGGCAGAACCTAGGACCTGC...ATTGGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR GCA 90 bp | TTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATCATGGCCGCCATCCCTaGAACGAGAAAACCCAACTT | + |
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Preference number: 4 (lower is better) Translates to: LCIYLCKSRLCHHRSPANHGRHP*NEKTQL Trigger: AAGTTGGGTTTTCTCGTTGCAGGGATGGCGGCCATG...ATTGGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191343.7 |
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| CDS-3UTR CCA 90 bp | ATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGAGTGTGCAAAAGCAATaGCGATGTGAAAGCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: MHLFVQVTPVSSPESSQWSVQKQ*RCESHP Trigger: TGGGTGGCTTTCACATCGCCATTGCTTTTGCACACT...CCATTGGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072748.13 |
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| CDS-3UTR GCA 90 bp | ATAGTGGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGGGCTTTCTCAAGGTaGCCATCTGGAACCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: IVVMHLFVQVTPVSSPESRAFSR*PSGTRF Trigger: AAACCTGGTTCCAGATGGGCACCTTGAGAAAGCCCT...GGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACCACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR GCA 90 bp | GTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATTCAACACCACCAGGTaGAGATTCTTGACTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VMHLFVQVTPVSSPESSQFNTTR*RFLTVE Trigger: CTCCACAGTCAAGAATCTGCACCTGGTGGTGTTGAA...TTGGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072748.13 |
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| CDS CCA 90 bp | GCAGAGCTTGATGGAAGGAGTCAGAGGCCAGCAGCAGTCCAGAGCTaGTGGCCAAGGCTCTGCCAGTATCAGAGGAGGAGTGTCCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: AELDGRSQRPAAVQS*WPRLCQYQRRSVLG Trigger: CCCAAGGACACTCCTCCTCTGATACTGGCAGAGCCTTGGCCACCAGCTCTGGACTGCTGCTGGCCTCTGACTCCTTCCATCAAGCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | CACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGCCGTGTGAAGCAGAGCTaGATGGAAGGAGTCAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: HACVITGVQPMGGREGLGRVKQS*MEGVRG Trigger: GCCTCTGACTCCTTCCATCAAGCTCTGCTTCACACG...GCCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | TCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGAAAGGGGTGTCATCCTaGTCCTCTGCTTGCAGGCGT | + |
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Preference number: 5 (lower is better) Translates to: SRLCHHRSPANGRQGRTWKGVSS*SSACRR Trigger: ACGCCTGCAAGCAGAGGACAAGGATGACACCCCTTT...CCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS GCA 90 bp | AGGAGTCAGAGGCCAGCAGCAGTCCAGAGCTGGTGGCCAAGGCTCTaGCAGTATCAGAGGAGGAGTGTCCTTGGGCCACATCTTTATAGG | + |
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Preference number: 5 (lower is better) Translates to: RSQRPAAVQSWWPRL*QYQRRSVLGPHLYR Trigger: CCTATAAAGATGTGGCCCAAGGACACTCCTCCTCTGATACTGGCAGAGCCTTGGCCACCAGCTCTGGACTGCTGCTGGCCTCTGACTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS CCA 90 bp | TCCAGGGCTTTCTCAAGGTGCCCATCTGGAACCAGGTTTTGGGGCTaGGCTACTTTCTGTGCAGGCTGGGCAGGTCCTAGGTTCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SRAFSRCPSGTRFWG*ATFCAGWAGPRFCH Trigger: ATGGCAGAACCTAGGACCTGCCCAGCCTGCACAGAAAGTAGCCCAGCCCCAAAACCTGGTTCCAGATGGGCACCTTGAGAAAGCCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | CGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGCATATCTGGAACCAGGTTTaGGGGCTGGGCTACTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: RLCHHRSPANGRQGRTWHIWNQV*GLGYFL Trigger: CAGAAAGTAGCCCAGCCCCAAAACCTGGTTCCAGAT...ATGCCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | GTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGTCCAGGAAGAGGTCCTaGGCAATGACAAAGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: VTPVSSPESSQWEAGKDLSRKRS*AMTKKP Trigger: CGGCTTCTTTGTCATTGCCAAGGACCTCTTCCTGGA...CAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | CGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGCATGGTATGGTCTCCAGATaGGCCATGGAAAAGGACCCT | + |
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Preference number: 5 (lower is better) Translates to: RLCHHRSPANGRQGRTWHGMVSR*AMEKDP Trigger: AGGGTCCTTTTCCATGGCCAATCTGGAGACCATACC...ATGCCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | TCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAGGCAGGGAAGGACTTGGGCCTTTGGATGTAGGTaGTGGGTTCAGGGTATGGTC | + |
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Preference number: 5 (lower is better) Translates to: SRLCHHRSPANGRQGRTWAFGCR*WVQGMV Trigger: GACCATACCCTGAACCCACAACCTACATCCAAAGGC...CCAAGTCCTTCCCTGCCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS CCA 90 bp | CATGGCCGCCATCCCTGCAACGAGAAAAGAGACAGTTCCCCAGAGTaGATACCAGCACTTCAACACCACCAGGTGCAGATTCTTGACTGT | + |
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Preference number: 5 (lower is better) Translates to: HGRHPCNEKRDSSPE*IPALQHHQVQILDC Trigger: ACAGTCAAGAATCTGCACCTGGTGGTGTTGAAGTGCTGGTATCCACTCTGGGGAACTGTCTCTTTTCTCGTTGCAGGGATGGCGGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072748.13 |
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| CDS-3UTR CAA 90 bp | TGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAATGGGAAAGGGGTGTCATCCTaGTCCTCTGCTTGCAGGCGT | + |
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Preference number: 5 (lower is better) Translates to: CIYLCKSRLCHHRSPANGKGVSS*SSACRR Trigger: ACGCCTGCAAGCAGAGGACAAGGATGACACCCCTTT...CCCATTGGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS TCA 90 bp | CCCAGAGTGGATACCAGCACTTCAACACCACCAGGTGCAGATTCTTaGCTGTGGAGATCAAGTAGCCACCAAAGGCCAAGTGTGCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: PRVDTSTSTPPGADS*LWRSSSHQRPSVQK Trigger: CTTTTGCACACTTGGCCTTTGGTGGCTACTTGATCTCCACAGTCAAGAATCTGCACCTGGTGGTGTTGAAGTGCTGGTATCCACTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072748.13 |
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| CDS-3UTR CAA 90 bp | TGGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCATCTGGAACCAGGTTTaGGGGCTGGGCTACTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: WLCIYLCKSRLCHHRSPAIWNQV*GLGYFL Trigger: CAGAAAGTAGCCCAGCCCCAAAACCTGGTTCCAGAT...GGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | TGGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCTCCAGGAAGAGGTCCTaGGCAATGACAAAGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: WLCIYLCKSRLCHHRSPASRKRS*AMTKKP Trigger: CGGCTTCTTTGTCATTGCCAAGGACCTCTTCCTGGA...GGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | GGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAGGTATGGTCTCCAGATaGGCCATGGAAAAGGACCCT | + |
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Preference number: 5 (lower is better) Translates to: GYAFICASHACVITGVQPGMVSR*AMEKDP Trigger: AGGGTCCTTTTCCATGGCCAATCTGGAGACCATACC...TGGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | GGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAGCCTTTGGATGTAGGTaGTGGGTTCAGGGTATGGTC | + |
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Preference number: 5 (lower is better) Translates to: GYAFICASHACVITGVQPAFGCR*WVQGMV Trigger: GACCATACCCTGAACCCACAACCTACATCCAAAGGC...TGGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | AGTGGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGAAAGGGGTGTCATCCTaGTCCTCTGCTTGCAGGCGT | + |
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Preference number: 5 (lower is better) Translates to: SGYAFICASHACVITGVQKGVSS*SSACRR Trigger: ACGCCTGCAAGCAGAGGACAAGGATGACACCCCTTT...CTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | AGTGGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGGCCTTTGGATGTAGGTaGTGGGTTCAGGGTATGGTC | + |
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Preference number: 5 (lower is better) Translates to: SGYAFICASHACVITGVQAFGCR*WVQGMV Trigger: GACCATACCCTGAACCCACAACCTACATCCAAAGGC...CTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | TGGTTATGCATTTATTTGTGCAAGTCACGCCTGTGTCATCACCGGAGTCCAGCCAGAGGAGGAGTGTCCTaGGGCCACATCTTTATAGGA | + |
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Preference number: 5 (lower is better) Translates to: WLCIYLCKSRLCHHRSPARGGVS*GHIFIG Trigger: TCCTATAAAGATGTGGCCCAAGGACACTCCTCCTCT...GGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAATAAATGCATAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | GCAGGGAAGGACTTGGCATTGCAGGAACTCAGTCTTTATTGGGAAAGTCTAGTACGTGTGAAGCAGAGCTaGATGGAAGGAGTCAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: AGKDLALQELSLYWESLVRVKQS*MEGVRG Trigger: GCCTCTGACTCCTTCCATCAAGCTCTGCTTCACACG...TACTAGACTTTCCCAATAAAGACTGAGTTCCTGCAATGCCAAGTCCTTCCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | GGACTTGGCATTGCAGGAACTCAGTCTTTATTGGGAAAGTCTAGTAGTCTTAGATCCAGGAAGAGGTCCTaGGCAATGACAAAGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: GLGIAGTQSLLGKSSSLRSRKRS*AMTKKP Trigger: CGGCTTCTTTGTCATTGCCAAGGACCTCTTCCTGGA...TCTAAGACTACTAGACTTTCCCAATAAAGACTGAGTTCCTGCAATGCCAAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | GAAGGACTTGGCATTGCAGGAACTCAGTCTTTATTGGGAAAGTCTAGTAGTCTTGGTATGGTCTCCAGATaGGCCATGGAAAAGGACCCT | + |
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Preference number: 5 (lower is better) Translates to: EGLGIAGTQSLLGKSSSLGMVSR*AMEKDP Trigger: AGGGTCCTTTTCCATGGCCAATCTGGAGACCATACC...AAGACTACTAGACTTTCCCAATAAAGACTGAGTTCCTGCAATGCCAAGTCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS-3UTR CAA 90 bp | GGACTTGGCATTGCAGGAACTCAGTCTTTATTGGGAAAGTCTAGTAGTCTTAGAAGAGGAGGAGTGTCCTaGGGCCACATCTTTATAGGA | + |
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Preference number: 5 (lower is better) Translates to: GLGIAGTQSLLGKSSSLRRGGVS*GHIFIG Trigger: TCCTATAAAGATGTGGCCCAAGGACACTCCTCCTCT...TCTAAGACTACTAGACTTTCCCAATAAAGACTGAGTTCCTGCAATGCCAAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS GCA 72 bp | AGGCCAGCAGCAGTCCAGAGCTGGTGGCCAAGGCTCTaGCAGTATCAGAGGAGGAGTGTCCTTGGGCCACAT | + |
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Preference number: 6 (lower is better) Translates to: RPAAVQSWWPRL*QYQRRSVLGPH Trigger: ATGTGGCCCAAGGACACTCCTCCTCTGATACTGGCAGAGCCTTGGCCACCAGCTCTGGACTGCTGCTGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS CAA 72 bp | CAGGGCTTTCTCAAGGTGCCCATCTGGAACCAGGTTTaGGGGCTGGGCTACTTTCTGTGCAGGCTGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: QGFLKVPIWNQV*GLGYFLCRLGR Trigger: CCTGCCCAGCCTGCACAGAAAGTAGCCCAGCCCCAAAACCTGGTTCCAGATGGGCACCTTGAGAAAGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS CAA 72 bp | GGCCAAGGCTCTGCCAGTATCAGAGGAGGAGTGTCCTaGGGCCACATCTTTATAGGATGGTGGTGGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GQGSASIRGGVS*GHIFIGWWWPQ Trigger: CTGGGGCCACCACCATCCTATAAAGATGTGGCCCAAGGACACTCCTCCTCTGATACTGGCAGAGCCTTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS GCA 72 bp | GCTACTTTCTGTGCAGGCTGGGCAGGTCCTAGGTTCTaGCATCGTGAGACTTCTCCAGTAACACTGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: ATFCAGWAGPRF*HRETSPVTLPG Trigger: TCCCGGCAGTGTTACTGGAGAAGTCTCACGATGGCAGAACCTAGGACCTGCCCAGCCTGCACAGAAAGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS CCA 72 bp | ACCAGGTTTTGGGGCTGGGCTACTTTCTGTGCAGGCTaGGCAGGTCCTAGGTTCTGCCATCGTGAGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: TRFWGWATFCAG*AGPRFCHRETS Trigger: AGAAGTCTCACGATGGCAGAACCTAGGACCTGCCCAGCCTGCACAGAAAGTAGCCCAGCCCCAAAACCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS CCA 72 bp | GTCACTTCCCTCCAGGGCTTTCTCAAGGTGCCCATCTaGAACCAGGTTTTGGGGCTGGGCTACTTTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: VTSLQGFLKVPI*NQVLGLGYFLC Trigger: GCACAGAAAGTAGCCCAGCCCCAAAACCTGGTTCCAGATGGGCACCTTGAGAAAGCCCTGGAGGGAAGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS TCA 72 bp | TGGCTGTGGACCCCGACAGGAAGATCTCCAGGAAGGTaGAGCAGAACAGGGTCAGCTCTAGCCTTTGGATGT | + |
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Preference number: 6 (lower is better) Translates to: WLWTPTGRSPGR*SRTGSALAFGC Trigger: ACATCCAAAGGCTAGAGCTGACCCTGTTCTGCTTCACCTTCCTGGAGATCTTCCTGTCGGGGTCCACAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS GCA 72 bp | TGTAGAAGGTCACTTCCCTCCAGGGCTTTCTCAAGGTaGCCATCTGGAACCAGGTTTTGGGGCTGGGCTACT | + |
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Preference number: 6 (lower is better) Translates to: CRRSLPSRAFSR*PSGTRFWGWAT Trigger: AGTAGCCCAGCCCCAAAACCTGGTTCCAGATGGGCACCTTGAGAAAGCCCTGGAGGGAAGTGACCTTCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS CAA 72 bp | ATTGGCCATGGAAAAGGACCCTCCAGGAAGAGGTCCTaGGCAATGACAAAGAAGCCGGCCAGTGCGCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: IGHGKGPSRKRS*AMTKKPASAQN Trigger: GTTCTGCGCACTGGCCGGCTTCTTTGTCATTGCCAAGGACCTCTTCCTGGAGGGTCCTTTTCCATGGCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS CAA 72 bp | GGATGTAGGTTGTGGGTTCAGGGTATGGTCTCCAGATaGGCCATGGAAAAGGACCCTCCAGGAAGAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GCRLWVQGMVSR*AMEKDPPGRGP Trigger: AGGACCTCTTCCTGGAGGGTCCTTTTCCATGGCCAATCTGGAGACCATACCCTGAACCCACAACCTACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072748.13 ENSMUST00000190246.2 ENSMUST00000191343.7 |
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| CDS TCA 72 bp | CCACCAAAGGCCAAGTGTGCAAAAGCAATGGCGATGTaGAAGCCACCCAACTTCTGTAGAAGGTCACTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PPKAKCAKAMAM*KPPNFCRRSLP Trigger: GGGAAGTGACCTTCTACAGAAGTTGGGTGGCTTTCACATCGCCATTGCTTTTGCACACTTGGCCTTTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072748.13 |
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| CDS CCA 72 bp | CATCCCTGCAACGAGAAAAGAGACAGTTCCCCAGAGTaGATACCAGCACTTCAACACCACCAGGTGCAGATT | + |
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Preference number: 6 (lower is better) Translates to: HPCNEKRDSSPE*IPALQHHQVQI Trigger: AATCTGCACCTGGTGGTGTTGAAGTGCTGGTATCCACTCTGGGGAACTGTCTCTTTTCTCGTTGCAGGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072748.13 |
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| CDS TCA 72 bp | GATACCAGCACTTCAACACCACCAGGTGCAGATTCTTaGCTGTGGAGATCAAGTAGCCACCAAAGGCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: DTSTSTPPGADS*LWRSSSHQRPS Trigger: ACTTGGCCTTTGGTGGCTACTTGATCTCCACAGTCAAGAATCTGCACCTGGTGGTGTTGAAGTGCTGGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072748.13 |
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| CDS GCA 72 bp | GACTGTGGAGATCAAGTAGCCACCAAAGGCCAAGTGTaGAAAAGCAATGGCGATGTGAAAGCCACCCAACTT | + |
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Preference number: 6 (lower is better) Translates to: DCGDQVATKGQV*KSNGDVKATQL Trigger: AAGTTGGGTGGCTTTCACATCGCCATTGCTTTTGCACACTTGGCCTTTGGTGGCTACTTGATCTCCACAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072748.13 |
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| CDS CAA 72 bp | AAGAAGCCGGCCAGTGCGCAGAACAAGCTGATAACGTaGGCTATCACACAGAGAACCTTCAGAGAGGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: KKPASAQNKLIT*AITQRTFREVL Trigger: TAAGACCTCTCTGAAGGTTCTCTGTGTGATAGCCAACGTTATCAGCTTGTTCTGCGCACTGGCCGGCTTCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072748.13 ENSMUST00000191343.7 |
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| CDS CCA 72 bp | TCAAGTAGCCACCAAAGGCCAAGTGTGCAAAAGCAATaGCGATGTGAAAGCCACCCAACTTCTGTAGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SSSHQRPSVQKQ*RCESHPTSVEG Trigger: ACCTTCTACAGAAGTTGGGTGGCTTTCACATCGCCATTGCTTTTGCACACTTGGCCTTTGGTGGCTACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072748.13 |
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