RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRTFB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000009569

Ensembl transcript IDs: ENSMUST00000009713.14, ENSMUST00000056715.7, ENSMUST00000115809.8, ENSMUST00000149359.2

Found 580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCACTGCCAGTGCCTCCCATGATTCCAGACAGCACCTCGTGGATCTaGGATTGCCAAGCTGCTGTCACAAGCTTGGGACACGTCCGCCCC +
Preference number: 1 (lower is better)
Translates to: SLPVPPMIPDSTSWI*DCQAAVTSLGHVRP
Trigger: GGGGCGGACGTGTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTGGAATCATGGGAGGCACTGGCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR TCA 90 bp TGGCTCTTCCCCTCCCTCCCTTGTGGGTGGCCTGGTGTTTCAAGTTaGGCTGCTTGCCTCTTATTAGGGCCACGAGGTGACCACAGAGGA +
Preference number: 1 (lower is better)
Translates to: WLFPSLPCGWPGVSS*AACLLLGPRGDHRG
Trigger: TCCTCTGTGGTCACCTCGTGGCCCTAATAAGAGGCAAGCAGCTCAACTTGAAACACCAGGCCACCCACAAGGGAGGGAGGGGAAGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR GCA 90 bp ACTTCCCAGAGCCAGGTCTGCTGTGGGAAAGTAAAATGGCTGCCCTaGCTGGAGGGACAGCTGCCTCCTCAGCTGTCACTGCACAGACTA +
Preference number: 1 (lower is better)
Translates to: TSQSQVCCGKVKWLP*LEGQLPPQLSLHRL
Trigger: TAGTCTGTGCAGTGACAGCTGAGGAGGCAGCTGTCCCTCCAGGCAGGGCAGCCATTTTACTTTCCCACAGCAGACCTGGCTCTGGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CCA 90 bp AGCACATGTGCAGTGGCTCTTCCCCTCCCTCCCTTGTGGGTGGCCTaGTGTTTCAAGTTGAGCTGCTTGCCTCTTATTAGGGCCACGAGG +
Preference number: 1 (lower is better)
Translates to: STCAVALPLPPLWVA*CFKLSCLPLIRATR
Trigger: CCTCGTGGCCCTAATAAGAGGCAAGCAGCTCAACTTGAAACACCAGGCCACCCACAAGGGAGGGAGGGGAAGAGCCACTGCACATGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR GCA 90 bp GTAGATAAGATGGGTCTCCTCTTGGCCACTTCCCAGAGCCAGGTCTaGTGTGGGAAAGTAAAATGGCTGCCCTGCCTGGAGGGACAGCTG +
Preference number: 1 (lower is better)
Translates to: VDKMGLLLATSQSQV*CGKVKWLPCLEGQL
Trigger: CAGCTGTCCCTCCAGGCAGGGCAGCCATTTTACTTTCCCACAGCAGACCTGGCTCTGGGAAGTGGCCAAGAGGAGACCCATCTTATCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CCA 90 bp GATAAGAGCACAACTTTCGGGGGTCAGTTCTGCCCTTCTACCACATaGGCTCTAGGGCTCAAGCTCAGCCTCTCAGGCTTGTTGGCAGGC +
Preference number: 1 (lower is better)
Translates to: DKSTTFGGQFCPSTT*ALGLKLSLSGLLAG
Trigger: GCCTGCCAACAAGCCTGAGAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCCGAAAGTTGTGCTCTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CCA 90 bp ACTCTAAGGAGCACATGTGCAGTGGCTCTTCCCCTCCCTCCCTTGTaGGTGGCCTGGTGTTTCAAGTTGAGCTGCTTGCCTCTTATTAGG +
Preference number: 1 (lower is better)
Translates to: TLRSTCAVALPLPPL*VAWCFKLSCLPLIR
Trigger: CCTAATAAGAGGCAAGCAGCTCAACTTGAAACACCAGGCCACCCACAAGGGAGGGAGGGGAAGAGCCACTGCACATGTGCTCCTTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CCA 90 bp CTGGCAGTCTGTGCCTCAGAAAGTAAAGTTGACACCACCACACTGTaGATGCTGCAGAAGAGGGAGACTGGGGTTGGACTCTACTGCGAC +
Preference number: 1 (lower is better)
Translates to: LAVCASESKVDTTTL*MLQKRETGVGLYCD
Trigger: GTCGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGGTGTCAACTTTACTTTCTGAGGCACAGACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR GCA 90 bp TATCAAGTGTCGCTCACGTCACTGGTGTCACATGTACCTACAGGATaGTCAAGCCAGGGGACTAGGGCAAGGAATGCTGTGAGGGAGTTG +
Preference number: 1 (lower is better)
Translates to: YQVSLTSLVSHVPTG*SSQGTRARNAVREL
Trigger: CAACTCCCTCACAGCATTCCTTGCCCTAGTCCCCTGGCTTGAGCATCCTGTAGGTACATGTGACACCAGTGACGTGAGCGACACTTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR TCA 90 bp CACCATGAGAGATGTGGACTGACTGTTTTTAAGTGCAGTATTCCATaGGAGGCTGGGCAAGCTGCACAGTCAGCAAGCAGCACAGTTGCC +
Preference number: 1 (lower is better)
Translates to: HHERCGLTVFKCSIP*EAGQAAQSASSTVA
Trigger: GGCAACTGTGCTGCTTGCTGACTGTGCAGCTTGCCCAGCCTCTCATGGAATACTGCACTTAAAAACAGTCAGTCCACATCTCTCATGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
3UTR TCA 90 bp GTCTCTCACACTTGGCTTCCAGGCTGTGGCCTTCCTTTTTGTCTGTaGCAATGTATTTTGACTTCGACAGTGCAGCTATGGCTCCAGCTA +
Preference number: 1 (lower is better)
Translates to: VSHTWLPGCGLPFCL*QCILTSTVQLWLQL
Trigger: TAGCTGGAGCCATAGCTGCACTGTCGAAGTCAAAATACATTGTCACAGACAAAAAGGAAGGCCACAGCCTGGAAGCCAAGTGTGAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR GCA 90 bp ATCACAGGAGAATCAACCTCATTCACCCAAGGCCACTGGGGAAGCTaGAGCACTATCAATGTATCTGGACTCAATACACTGGGCTCTTGT +
Preference number: 1 (lower is better)
Translates to: ITGESTSFTQGHWGS*STINVSGLNTLGSC
Trigger: ACAAGAGCCCAGTGTATTGAGTCCAGATACATTGATAGTGCTGCAGCTTCCCCAGTGGCCTTGGGTGAATGAGGTTGATTCTCCTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR TCA 90 bp CACTGGGGTAAAACCTCCTCAGAAATGATTAAGGTTCTCTCTAGATaGTGGGTCAGGATACTGCCTGGATGTGCTGTGGAAGAGACATGT +
Preference number: 1 (lower is better)
Translates to: HWGKTSSEMIKVLSR*WVRILPGCAVEETC
Trigger: ACATGTCTCTTCCACAGCACATCCAGGCAGTATCCTGACCCATCATCTAGAGAGAACCTTAATCATTTCTGAGGAGGTTTTACCCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR GCA 90 bp TGCCATGATTTTCTGTTCATTAACAAGTGCTTCAGCAGGCATGGTTaGTGCCACTGGTGTTTTCTCCCTTCTTGTCAGGAAGTGAGATGC +
Preference number: 1 (lower is better)
Translates to: CHDFLFINKCFSRHG*CHWCFLPSCQEVRC
Trigger: GCATCTCACTTCCTGACAAGAAGGGAGAAAACACCAGTGGCAGCAACCATGCCTGCTGAAGCACTTGTTAATGAACAGAAAATCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CCA 90 bp ATGTCTAACATCACAGGAGAATCAACCTCATTCACCCAAGGCCACTaGGGAAGCTGCAGCACTATCAATGTATCTGGACTCAATACACTG +
Preference number: 1 (lower is better)
Translates to: MSNITGESTSFTQGH*GSCSTINVSGLNTL
Trigger: CAGTGTATTGAGTCCAGATACATTGATAGTGCTGCAGCTTCCCCAGTGGCCTTGGGTGAATGAGGTTGATTCTCCTGTGATGTTAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR TCA 90 bp AAGAGGCCTTTTTATAGAGCGGTCTTTGGTCATGACACATTGATGTaGGCCTATGGGAAAGATGCCCACATTTGTCCAGAACATGTGCGA +
Preference number: 1 (lower is better)
Translates to: KRPFYRAVFGHDTLM*AYGKDAHICPEHVR
Trigger: TCGCACATGTTCTGGACAAATGTGGGCATCTTTCCCATAGGCTCACATCAATGTGTCATGACCAAAGACCGCTCTATAAAAAGGCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR TCA 90 bp TCTATCCTCGAAGTGCCAATTTTCAACACCATGAGAGATGTGGACTaGCTGTTTTTAAGTGCAGTATTCCATGAGAGGCTGGGCAAGCTG +
Preference number: 1 (lower is better)
Translates to: SILEVPIFNTMRDVD*LFLSAVFHERLGKL
Trigger: CAGCTTGCCCAGCCTCTCATGGAATACTGCACTTAAAAACAGTCAGTCCACATCTCTCATGGTGTTGAAAATTGGCACTTCGAGGATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
3UTR CCA 90 bp AAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTATaGCATTCAGACACAGTACAGAATCGAGTCAGGGGTGCAAACAGC +
Preference number: 1 (lower is better)
Translates to: KIQSASPMYSTSANV*HSDTVQNRVRGANS
Trigger: GCTGTTTGCACCCCTGACTCGATTCTGTACTGTGTCTGAATGCCATACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR GCA 90 bp CACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTaGAAACGTATGGCATTCAGACACAGTACAGAATCGAGTCAGGGG +
Preference number: 1 (lower is better)
Translates to: HTYKNTVCIAYVQYK*KRMAFRHSTESSQG
Trigger: CCCCTGACTCGATTCTGTACTGTGTCTGAATGCCATACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR TCA 90 bp GATGCCTTTGGTTCCTTTAAACATTTTGGATTACTAATGGTTTCTTaGGGTCAAGTACTTTTGATGGATCCAAACCCTTTCCTAACCCTT +
Preference number: 1 (lower is better)
Translates to: DAFGSFKHFGLLMVS*GQVLLMDPNPFLTL
Trigger: AAGGGTTAGGAAAGGGTTTGGATCCATCAAAAGTACTTGACCTCAAGAAACCATTAGTAATCCAAAATGTTTAAAGGAACCAAAGGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR TCA 90 bp AACACACTAATAGTAATTATGGGCTTTGAGAAACCCACTGATACTTaGTACTACTTTAAGTGGACACTCAAAGCTGTAGAGAAAGGACTA +
Preference number: 1 (lower is better)
Translates to: NTLIVIMGFEKPTDT*YYFKWTLKAVEKGL
Trigger: TAGTCCTTTCTCTACAGCTTTGAGTGTCCACTTAAAGTAGTATCAAGTATCAGTGGGTTTCTCAAAGCCCATAATTACTATTAGTGTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCGAAGCTGCTGCTGGCTaGCCAGAGTGCTCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLEAAAG*PECSGA
Trigger: GGCACCTGAGCACTCTGGGCAGCCAGCAGCAGCTTC...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCGAACCAGGGAGCTGGTaGCAGGGGGTTGGTCTAACC +
Preference number: 2 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLEPGSW*QGVGLT
Trigger: GGTTAGACCAACCCCCTGTCACCAGCTCCCTGGTTC...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCGGTTGGTCTAACCTGTaGTCAAGGCCCACACCTTCC +
Preference number: 2 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSGWSNL*SRPTPS
Trigger: GGAAGGTGTGGGCCTTGAGCACAGGTTAGACCAACC...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCAACAAGAGGATTACCTaGGCTCAGTGGGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLNKRIT*AQWALP
Trigger: GGGCAGGGCCCACTGAGCTCAGGTAATCCTCTTGTT...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGACTGGCTGGAAGCTGCTaGTGGCTGCCCAGAGTGCTC +
Preference number: 2 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRLAGSC*WLPRVL
Trigger: GAGCACTCTGGGCAGCCAGCAGCAGCTTCCAGCCAG...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp CCACCACACTGTGGATGCTGCAGAAGAGGGAGACTGGGGTTGGACTCTACTGCGGGGACTCAAAGCCTCTaGCTGGAAGCTGCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: PPHCGCCRRGRLGLDSTAGTQSL*LEAAAG
Trigger: GCCAGCAGCAGCTTCCAGCCAGAGGCTTTGAGTCCC...CGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CAA 90 bp GACAGAGGCCGGCGAGGCTGCTTGACTTTGCTGGCCCTGACCTGGTaGCTCTGCTGGCAGAATTCAACAGCCACTCTCAGCTTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: DRGRRGCLTLLALTW*LCWQNSTATLSFLC
Trigger: GCAGAGAAAGCTGAGAGTGGCTGTTGAATTCTGCCAGCAGAGCAACCAGGTCAGGGCCAGCAAAGTCAAGCAGCCTCGCCGGCCTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCTTGGCTTCCAGGCTGTaGCCTTCCTTTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSLASRL*PSFLSV
Trigger: CACAGACAAAAAGGAAGGCCACAGCCTGGAAGCCAA...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCTTCACCCAAGGCCACTaGGGAAGCTGCAGCACTATC +
Preference number: 2 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLFTQGH*GSCSTI
Trigger: GATAGTGCTGCAGCTTCCCCAGTGGCCTTGGGTGAA...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp GCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACACGTCCAACAAGAGGATTACCTaGGCTCAGTGGGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: APRGSEIAKLLSQAWDTSNKRIT*AQWALP
Trigger: GGGCAGGGCCCACTGAGCTCAGGTAATCCTCTTGTT...GGACGTGTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp GCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACACGTCCGTGTGTTGTGTGATGTaGTGGACAGAGGCCGGCGAG +
Preference number: 2 (lower is better)
Translates to: APRGSEIAKLLSQAWDTSVCCVM*WTEAGE
Trigger: CTCGCCGGCCTCTGTCCATCACATCACACAACACAC...GGACGTGTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCCCCTGCCCACCAGAATaGCAAGCTTCAGTTGAGAGA +
Preference number: 2 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLPCPPE*QASVER
Trigger: TCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGG...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACATTCACCCAAGGCCACTaGGGAAGCTGCAGCACTATC +
Preference number: 2 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTFTQGH*GSCSTI
Trigger: GATAGTGCTGCAGCTTCCCCAGTGGCCTTGGGTGAA...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 90 bp TGTAGAGAAAGGACTAAAGCTCTCCACCCAAACCTAGAGCTGGCATaGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: CRERTKALHPNLELA*PRGARLPRSSVAAE
Trigger: CTCTGCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGGTTTGGGTGGAGAGCTTTAGTCCTTTCTCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACAGGTCAGGATACTGCCTaGATGTGCTGTGGAAGAGAC +
Preference number: 2 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTGQDTA*MCCGRD
Trigger: GTCTCTTCCACAGCACATCCAGGCAGTATCCTGACC...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp GCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACACGTCCTGCTGCCTGGAAAAGTaGCTCTTGAGGCTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: APRGSEIAKLLSQAWDTSCCLEK*LLRLQS
Trigger: GGACTGGAGCCTCAAGAGCCACTTTTCCAGGCAGCA...GGACGTGTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CAA 90 bp GCCACTCTAAGGAGCACATGTGCAGTGGCTCTTCCCCTCCCTCCCTaGTGGGTGGCCTGGTGTTTCAAGTTGAGCTGCTTGCCTCTTATT +
Preference number: 2 (lower is better)
Translates to: ATLRSTCAVALPLPP*WVAWCFKLSCLPLI
Trigger: AATAAGAGGCAAGCAGCTCAACTTGAAACACCAGGCCACCCACAAGGGAGGGAGGGGAAGAGCCACTGCACATGTGCTCCTTAGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGAATTAGGGCCACGAGGTaGCCACAGAGGATAAAAGGT +
Preference number: 2 (lower is better)
Translates to: GPCPPECQASVERALFARIRATR*PQRIKG
Trigger: ACCTTTTATCCTCTGTGGTCACCTCGTGGCCCTAAT...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCCACTGGGCTCTTGTGTaGCAGTATCTTGTAGACATG +
Preference number: 2 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLHWALV*QYLVDM
Trigger: CATGTCTACAAGATACTGTCACACAAGAGCCCAGTG...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGAAAGAGACATGTGGATTaGTGTAGGAAGCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: GPCPPECQASVERALFARKRHVD*CRKPTW
Trigger: CCAGGTGGGCTTCCTACATCAATCCACATGTCTCTT...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACTCTAAGGAGCACATGTaGAGTGGCTCTTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDSKEHM*SGSSPP
Trigger: GGGAGGGGAAGAGCCACTGCACATGTGCTCCTTAGA...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp CCACCACACTGTGGATGCTGCAGAAGAGGGAGACTGGGGTTGGACTCTACTGCGTTGGCTTCCAGGCTGTaGCCTTCCTTTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: PPHCGCCRRGRLGLDSTALASRL*PSFLSV
Trigger: CACAGACAAAAAGGAAGGCCACAGCCTGGAAGCCAA...CGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACATGCCAAGCTTCAGTTaGGAGAGCGCTGTTTGCCAG +
Preference number: 2 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDMPSFS*ESAVCQ
Trigger: CTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCAT...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp CAACACACGAATGGACCCCCGACTGCCATGATTTTCTGTTCATTAACAAGTGCTCCAGAGCCGGCGGCCTaGGTGGAGGGTAAGAGCTTC +
Preference number: 2 (lower is better)
Translates to: QHTNGPPTAMIFCSLTSAPEPAA*VEGKSF
Trigger: GAAGCTCTTACCCTCCACTCAGGCCGCCGGCTCTGG...AGCACTTGTTAATGAACAGAAAATCATGGCAGTCGGGGGTCCATTCGTGTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCGCTGGCTGCCCAGAGTaGTCAGGTGCCTCTGACCTT +
Preference number: 2 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRAGCPE*SGASDL
Trigger: AAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGC...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACCCCTGCCCACCAGAATaGCAAGCTTCAGTTGAGAGA +
Preference number: 2 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDPCPPE*QASVER
Trigger: TCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGG...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACTGTGTGCTGAATGGATaGCTGAGTGAGTACTGCCGC +
Preference number: 2 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDCVLNG*LSEYCR
Trigger: GCGGCAGTACTCACTCAGGCATCCATTCAGCACACA...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CAA 90 bp GCCACTGTGGGAACAGTTCAGGGTGTAGATAAGATGGGTCTCCTCTaGGCCACTTCCCAGAGCCAGGTCTGCTGTGGGAAAGTAAAATGG +
Preference number: 2 (lower is better)
Translates to: ATVGTVQGVDKMGLL*ATSQSQVCCGKVKW
Trigger: CCATTTTACTTTCCCACAGCAGACCTGGCTCTGGGAAGTGGCCAAGAGGAGACCCATCTTATCTACACCCTGAACTGTTCCCACAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCTACTCTAGAGATATCTaGCTTATTACAAGTAGGACC +
Preference number: 2 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSYSRDI*LITSRT
Trigger: GGTCCTACTTGTAATAAGTCAGATATCTCTAGAGTA...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACGGGCACATGAACAACTaGGATGACCTCCTCTGTATC +
Preference number: 2 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDGHMNN*DDLLCI
Trigger: GATACAGAGGAGGTCATCTCAGTTGTTCATGTGCCC...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCGACCATTTTGATCACTaGGGTAAAACCTCCTCAGAA +
Preference number: 2 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLDHFDH*GKTSSE
Trigger: TTCTGAGGAGGTTTTACCCCAGTGATCAAAATGGTC...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAAGGAGGCCTGGTCAGATaGCAGGATCCAGCTACCCTA +
Preference number: 2 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQGGLVR*QDPATL
Trigger: TAGGGTAGCTGGATCCTGTCATCTGACCAGGCCTCC...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGATTTGGTTCTTTGAGATaGGCATGGTCACCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRFGSLR*AWSPER
Trigger: TCTCTCAGGTGACCATGCCCATCTCAAAGAACCAAA...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGATGTGGAAGAGACATGTaGATTGATGTAGGAAGCCCA +
Preference number: 2 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRCGRDM*IDVGSP
Trigger: TGGGCTTCCTACATCAATCCACATGTCTCTTCCACA...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACCCCTGTACATGCAAGTaGGAACTTAATGGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDPCTCK*ELNGLS
Trigger: AGAGAGCCCATTAAGTTCCCACTTGCATGTACAGGG...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACAAGAACTTCTGCAACTaGCCACTGTGGGAACAGTTC +
Preference number: 2 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDKNFCN*PLWEQF
Trigger: GAACTGTTCCCACAGTGGCCAGTTGCAGAAGTTCTT...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CAA 90 bp TCAGCTGTCACTGCACAGACTACTACAGTAACTATGAGAACAGCCTaGCTGCCTGGAAAAGTGGCTCTTGAGGCTCCAGTCCACTCTGGT +
Preference number: 2 (lower is better)
Translates to: SAVTAQTTTVTMRTA*LPGKVALEAPVHSG
Trigger: ACCAGAGTGGACTGGAGCCTCAAGAGCCACTTTTCCAGGCAGCAAGGCTGTTCTCATAGTTACTGTAGTAGTCTGTGCAGTGACAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp CAACACACGAATGGACCCCCGACTGCCATGATTTTCTGTTCATTAACAAGTGCTTCCCAGGTCCTCAGTTaGAGCAGAGCCAACCTCAGG +
Preference number: 2 (lower is better)
Translates to: QHTNGPPTAMIFCSLTSASQVLS*SRANLR
Trigger: CCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA...AGCACTTGTTAATGAACAGAAAATCATGGCAGTCGGGGGTCCATTCGTGTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACAGCCTATGGGAAAGATaGCCACATTTGTCCAGAACA +
Preference number: 2 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDSLWER*PHLSRT
Trigger: TGTTCTGGACAAATGTGGGCATCTTTCCCATAGGCT...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGCTGGAAGCTGCTGCTaGCTGCCCAGAGTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKAGSCC*LPRVLR
Trigger: CCTGAGCACTCTGGGCAGCCAGCAGCAGCTTCCAGC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCATTAGGGCCACGAGGTaGCCACAGAGGATAAAAGGT +
Preference number: 2 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRIRATR*PQRIKG
Trigger: ACCTTTTATCCTCTGTGGTCACCTCGTGGCCCTAAT...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAACTTAAGAAATGGGACTaGAGGCTGGATGGGATGGGC +
Preference number: 2 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQLKKWD*RLDGMG
Trigger: GCCCATCCCATCCAGCCTTCAGTCCCATTTCTTAAG...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp CCACCACACTGTGGATGCTGCAGAAGAGGGAGACTGGGGTTGGACTCTACTGCGATTTTCTTGGCAATGTaGTACAAACAGAAGCCTACA +
Preference number: 2 (lower is better)
Translates to: PPHCGCCRRGRLGLDSTAIFLAM*YKQKPT
Trigger: TGTAGGCTTCTGTTTGTATCACATTGCCAAGAAAAT...CGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp CAACACACGAATGGACCCCCGACTGCCATGATTTTCTGTTCATTAACAAGTGCTCCATTTCCCGGACTCTaGAGAGCTGACCTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: QHTNGPPTAMIFCSLTSAPFPGL*RADLAF
Trigger: GAAAGCCAGGTCAGCTCTGCAGAGTCCGGGAAATGG...AGCACTTGTTAATGAACAGAAAATCATGGCAGTCGGGGGTCCATTCGTGTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAAGGTCAGGATACTGCCTaGATGTGCTGTGGAAGAGAC +
Preference number: 2 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQGQDTA*MCCGRD
Trigger: GTCTCTTCCACAGCACATCCAGGCAGTATCCTGACC...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCGAAGGCTGGATGGGATaGGCACATGAACAACTGAGA +
Preference number: 2 (lower is better)
Translates to: GKMPTFVQNMCERSIKCREGWMG*AHEQLR
Trigger: TCTCAGTTGTTCATGTGCCCATCCCATCCAGCCTTC...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAAAAGAGACATGTGGATTaGTGTAGGAAGCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQKRHVD*CRKPTW
Trigger: CCAGGTGGGCTTCCTACATCAATCCACATGTCTCTT...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp CAACACACGAATGGACCCCCGACTGCCATGATTTTCTGTTCATTAACAAGTGCTTGTAGGAAGCCCACCTaGCTCAGGTTAAAGGGGATG +
Preference number: 2 (lower is better)
Translates to: QHTNGPPTAMIFCSLTSACRKPT*LRLKGM
Trigger: CATCCCCTTTAACCTGAGCCAGGTGGGCTTCCTACA...AGCACTTGTTAATGAACAGAAAATCATGGCAGTCGGGGGTCCATTCGTGTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAAAATGGGACTGAAGGCTaGATGGGATGGGCACATGAA +
Preference number: 2 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQNGTEG*MGWAHE
Trigger: TTCATGTGCCCATCCCATCCAGCCTTCAGTCCCATT...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACTACTCTAGAGATATCTaGCTTATTACAAGTAGGACC +
Preference number: 2 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDYSRDI*LITSRT
Trigger: GGTCCTACTTGTAATAAGTCAGATATCTCTAGAGTA...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAATCTAAGGAGCACATGTaGAGTGGCTCTTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: TVEVTRSKHIPMSNITGESKEHM*SGSSPP
Trigger: GGGAGGGGAAGAGCCACTGCACATGTGCTCCTTAGA...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGAAGCTGCTGCTGGCTaGCCAGAGTGCTCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSEAAAG*PECSGA
Trigger: GGCACCTGAGCACTCTGGGCAGCCAGCAGCAGCTTC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGGAGTCTCTCACACTTaGCTTCCAGGCTGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKGVSHT*LPGCGL
Trigger: AAGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAAGGAGTCTCTCACACTTaGCTTCCAGGCTGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: TVEVTRSKHIPMSNITGEGVSHT*LPGCGL
Trigger: AAGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCC...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATGTGAAGCCACTGGCTaGAGGCCCCTTGCCTTCTTA +
Preference number: 2 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKCEATG*RPLAFL
Trigger: TAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACA...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp CAACACACGAATGGACCCCCGACTGCCATGATTTTCTGTTCATTAACAAGTGCTAAGGTTCTCTCTAGATaGTGGGTCAGGATACTGCCT +
Preference number: 2 (lower is better)
Translates to: QHTNGPPTAMIFCSLTSAKVLSR*WVRILP
Trigger: AGGCAGTATCCTGACCCATCATCTAGAGAGAACCTT...AGCACTTGTTAATGAACAGAAAATCATGGCAGTCGGGGGTCCATTCGTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGGGACTCAAAGCCTCTaGCTGGAAGCTGCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSGTQSL*LEAAAG
Trigger: GCCAGCAGCAGCTTCCAGCCAGAGGCTTTGAGTCCC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAAGATGGAGACACTGTGTaGCTCAGTACTCTAGAGATA +
Preference number: 2 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQDGDTV*LSTLEI
Trigger: TATCTCTAGAGTACTGAGCCACACAGTGTCTCCATC...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGGACTGAAGGCTGGATaGGATGGGCACATGAACAAC +
Preference number: 2 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKGLKAG*DGHMNN
Trigger: GTTGTTCATGTGCCCATCCCATCCAGCCTTCAGTCC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAACACACCATTTCCAATaGACTCACTGCGGTCTGGGA +
Preference number: 2 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKTHHFQ*THCGLG
Trigger: TCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGT...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGGAAGGCTGGATGGGATaGGCACATGAACAACTGAGA +
Preference number: 2 (lower is better)
Translates to: AESSCWPETNFKQQIRLQEGWMG*AHEQLR
Trigger: TCTCAGTTGTTCATGTGCCCATCCCATCCAGCCTTC...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGAATGGGACTGAAGGCTaGATGGGATGGGCACATGAA +
Preference number: 2 (lower is better)
Translates to: AESSCWPETNFKQQIRLQNGTEG*MGWAHE
Trigger: TTCATGTGCCCATCCCATCCAGCCTTCAGTCCCATT...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGCCTAGTGCCATTTCCTaGCCTTTGGCTTTAGCTAAG +
Preference number: 2 (lower is better)
Translates to: AESSCWPETNFKQQIRLQPSAIS*PLALAK
Trigger: CTTAGCTAAAGCCAAAGGTCAGGAAATGGCACTAGG...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAAGATAAGGGCTGTCACTaGATAAAAATTCCATACTCT +
Preference number: 2 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQDKGCH*IKIPYS
Trigger: AGAGTATGGAATTTTTATTCAGTGACAGCCCTTATC...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGAAGGTTCTCTCTAGATaGTGGGTCAGGATACTGCCT +
Preference number: 2 (lower is better)
Translates to: AESSCWPETNFKQQIRLQKVLSR*WVRILP
Trigger: AGGCAGTATCCTGACCCATCATCTAGAGAGAACCTT...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTATGGCTGGAGGCCCCTTaGCTTCTTAAGAAATGGGAC +
Preference number: 2 (lower is better)
Translates to: THIKIQSASPMYSTSANVWLEAP*LLKKWD
Trigger: GTCCCATTTCTTAAGAAGGCAAGGGGCCTCCAGCCA...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGTCTTTGAGATGGGCATaGTCACCTGAGAGAGTCTGT +
Preference number: 2 (lower is better)
Translates to: AESSCWPETNFKQQIRLQSLRWA*SPERVC
Trigger: ACAGACTCTCTCAGGTGACCATGCCCATCTCAAAGA...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTATGTGGGAAAGTAAAATaGCTGCCCTGCCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: THIKIQSASPMYSTSANVCGKVK*LPCLEG
Trigger: TCCCTCCAGGCAGGGCAGCCATTTTACTTTCCCACA...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp CAACACACGAATGGACCCCCGACTGCCATGATTTTCTGTTCATTAACAAGTGCTGATAAGGGCTGTCACTaGATAAAAATTCCATACTCT +
Preference number: 2 (lower is better)
Translates to: QHTNGPPTAMIFCSLTSADKGCH*IKIPYS
Trigger: AGAGTATGGAATTTTTATTCAGTGACAGCCCTTATC...AGCACTTGTTAATGAACAGAAAATCATGGCAGTCGGGGGTCCATTCGTGTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTCCTAGTGCCATTTCCTaGCCTTTGGCTTTAGCTAAG +
Preference number: 2 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSPSAIS*PLALAK
Trigger: CTTAGCTAAAGCCAAAGGTCAGGAAATGGCACTAGG...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR GCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGTTTGTCCAGAACATGTaGGAGAGGTCTATCAAGTGT +
Preference number: 2 (lower is better)
Translates to: AESSCWPETNFKQQIRLQFVQNM*ERSIKC
Trigger: ACACTTGATAGACCTCTCGCACATGTTCTGGACAAA...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTAGCAATAGAAGGGACTTaGGGGCTAGAATGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: THIKIQSASPMYSTSANVAIEGT*GLECCL
Trigger: AAGACAACATTCTAGCCCTCAAGTCCCTTCTATTGC...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTATTTGGTTCTTTGAGATaGGCATGGTCACCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: THIKIQSASPMYSTSANVFGSLR*AWSPER
Trigger: TCTCTCAGGTGACCATGCCCATCTCAAAGAACCAAA...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTACTTTTGGCAAATACCTaGCGATGCCTTTGGTTCCTT +
Preference number: 2 (lower is better)
Translates to: THIKIQSASPMYSTSANVLLANT*RCLWFL
Trigger: AAGGAACCAAAGGCATCGCCAGGTATTTGCCAAAAG...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTAGACCATTTTGATCACTaGGGTAAAACCTCCTCAGAA +
Preference number: 2 (lower is better)
Translates to: THIKIQSASPMYSTSANVDHFDH*GKTSSE
Trigger: TTCTGAGGAGGTTTTACCCCAGTGATCAAAATGGTC...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR TCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTAACCAGGAAACAAAAATaGCTAGATCAGAACTGCTAC +
Preference number: 2 (lower is better)
Translates to: THIKIQSASPMYSTSANVTRKQK*LDQNCY
Trigger: GTAGCAGTTCTGATCTAGTCATTTTTGTTTCCTGGT...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR TCA 72 bp GTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATaGCAGGATCCAGCTACCCTAGTGTTGGTGCCTCCC +
Preference number: 3 (lower is better)
Translates to: VAAEPTSGGLVR*QDPATLVLVPP
Trigger: GGGAGGCACCAACACTAGGGTAGCTGGATCCTGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR GCA 72 bp GGGACTCAAAGCCTCTGGCTGGAAGCTGCTGCTGGCTaGCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATT +
Preference number: 3 (lower is better)
Translates to: GTQSLWLEAAAG*PECSGASDLAI
Trigger: AATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGCAGCTTCCAGCCAGAGGCTTTGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR GCA 72 bp GTGTTGTGTGATGTGATGGACAGAGGCCGGCGAGGCTaGTTGACTTTGCTGGCCCTGACCTGGTTGCTCTGC +
Preference number: 3 (lower is better)
Translates to: VLCDVMDRGRRG*LTLLALTWLLC
Trigger: GCAGAGCAACCAGGTCAGGGCCAGCAAAGTCAAGCAGCCTCGCCGGCCTCTGTCCATCACATCACACAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CCA 72 bp ACTTCCCAGAGCCAGGTCTGCTGTGGGAAAGTAAAATaGCTGCCCTGCCTGGAGGGACAGCTGCCTCCTCAG +
Preference number: 3 (lower is better)
Translates to: TSQSQVCCGKVK*LPCLEGQLPPQ
Trigger: CTGAGGAGGCAGCTGTCCCTCCAGGCAGGGCAGCCATTTTACTTTCCCACAGCAGACCTGGCTCTGGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CAA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCAATGCCAAGCTTCAGTaGAGAGAGCGCTGTTTGCCA +
Preference number: 3 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSNAKLQ*RERCLP
Trigger: TGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATT...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CCA 72 bp CACGCAGATTTCAAAGTGGGACTCAAAGCCTCTGGCTaGAAGCTGCTGCTGGCTGCCCAGAGTGCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: HADFKVGLKASG*KLLLAAQSAQV
Trigger: CACCTGAGCACTCTGGGCAGCCAGCAGCAGCTTCCAGCCAGAGGCTTTGAGTCCCACTTTGAAATCTGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR TCA 72 bp CAGTGGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTaGGAGAGCGCTGTTTGCCAGAGGTTAAAGCCAGGA +
Preference number: 3 (lower is better)
Translates to: QWALPTRMPSFS*ESAVCQRLKPG
Trigger: TCCTGGCTTTAACCTCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR GCA 72 bp GGATTACCTGAGCTCAGTGGGCCCTGCCCACCAGAATaGCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGA +
Preference number: 3 (lower is better)
Translates to: GLPELSGPCPPE*QASVERALFAR
Trigger: TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCCACTGAGCTCAGGTAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CCA 72 bp GCAGTGGCTCTTCCCCTCCCTCCCTTGTGGGTGGCCTaGTGTTTCAAGTTGAGCTGCTTGCCTCTTATTAGG +
Preference number: 3 (lower is better)
Translates to: AVALPLPPLWVA*CFKLSCLPLIR
Trigger: CCTAATAAGAGGCAAGCAGCTCAACTTGAAACACCAGGCCACCCACAAGGGAGGGAGGGGAAGAGCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CCA 72 bp CACCACCACACTGTGGATGCTGCAGAAGAGGGAGACTaGGGTTGGACTCTACTGCGACACTCCAGGCTTCTA +
Preference number: 3 (lower is better)
Translates to: HHHTVDAAEEGD*GWTLLRHSRLL
Trigger: TAGAAGCCTGGAGTGTCGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR TCA 72 bp GTGCCTCCCATGATTCCAGACAGCACCTCGTGGATCTaGGATTGCCAAGCTGCTGTCACAAGCTTGGGACAC +
Preference number: 3 (lower is better)
Translates to: VPPMIPDSTSWI*DCQAAVTSLGH
Trigger: GTGTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTGGAATCATGGGAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR GCA 72 bp TCGCTCACGTCACTGGTGTCACATGTACCTACAGGATaGTCAAGCCAGGGGACTAGGGCAAGGAATGCTGTG +
Preference number: 3 (lower is better)
Translates to: SLTSLVSHVPTG*SSQGTRARNAV
Trigger: CACAGCATTCCTTGCCCTAGTCCCCTGGCTTGAGCATCCTGTAGGTACATGTGACACCAGTGACGTGAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR GCA 72 bp GGCTGCTTGACTTTGCTGGCCCTGACCTGGTTGCTCTaGTGGCAGAATTCAACAGCCACTCTCAGCTTTCTC +
Preference number: 3 (lower is better)
Translates to: GCLTLLALTWLL*WQNSTATLSFL
Trigger: GAGAAAGCTGAGAGTGGCTGTTGAATTCTGCCAGCAGAGCAACCAGGTCAGGGCCAGCAAAGTCAAGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR GCA 72 bp ACCAGGGAGCTGGTGACAGGGGGTTGGTCTAACCTGTaGTCAAGGCCCACACCTTCCATTAACTCATTAGGT +
Preference number: 3 (lower is better)
Translates to: TRELVTGGWSNL*SRPTPSINSLG
Trigger: ACCTAATGAGTTAATGGAAGGTGTGGGCCTTGAGCACAGGTTAGACCAACCCCCTGTCACCAGCTCCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR GCA 72 bp TGTGAGCACAAGCTGTGTTCCCTGATAAACCTGCCCTaGCTTCCAGTTAGAATGCCGGGACAGCCTAGGGTT +
Preference number: 3 (lower is better)
Translates to: CEHKLCSLINLP*LPVRMPGQPRV
Trigger: AACCCTAGGCTGTCCCGGCATTCTAACTGGAAGGCAGGGCAGGTTTATCAGGGAACACAGCTTGTGCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CCA 72 bp GAATGCTGTGAGGGAGTTGGCTGTGAAGCCACTGGCTaGAGGCCCCTTGCCTTCTTAAGAAATGGGACTGAA +
Preference number: 3 (lower is better)
Translates to: ECCEGVGCEATG*RPLAFLRNGTE
Trigger: TTCAGTCCCATTTCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACAGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CCA 72 bp TGCTTGACTTTGCTGGCCCTGACCTGGTTGCTCTGCTaGCAGAATTCAACAGCCACTCTCAGCTTTCTCTGC +
Preference number: 3 (lower is better)
Translates to: CLTLLALTWLLC*QNSTATLSFLC
Trigger: GCAGAGAAAGCTGAGAGTGGCTGTTGAATTCTGCCAGCAGAGCAACCAGGTCAGGGCCAGCAAAGTCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CCA 72 bp CCGGGACAGCCTAGGGTTAATGGTCCTCTGCAGCAGTaGGTCCCTGTGTACTTAATATCCCCAGTGTTGTGT +
Preference number: 3 (lower is better)
Translates to: PGQPRVNGPLQQ*VPVYLISPVLC
Trigger: ACACAACACTGGGGATATTAAGTACACAGGGACCCACTGCTGCAGAGGACCATTAACCCTAGGCTGTCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR GCA 72 bp CAGAAAGTAAAGTTGACACCACCACACTGTGGATGCTaGAGAAGAGGGAGACTGGGGTTGGACTCTACTGCG +
Preference number: 3 (lower is better)
Translates to: QKVKLTPPHCGC*RRGRLGLDSTA
Trigger: CGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGGTGTCAACTTTACTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CCA 72 bp TGTGCCTCAGAAAGTAAAGTTGACACCACCACACTGTaGATGCTGCAGAAGAGGGAGACTGGGGTTGGACTC +
Preference number: 3 (lower is better)
Translates to: CASESKVDTTTL*MLQKRETGVGL
Trigger: GAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGGTGTCAACTTTACTTTCTGAGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CAA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAACAGGTGCCTCTGACCTaGCTATTGATCTGCCGTAGG +
Preference number: 3 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQQVPLT*LLICRR
Trigger: CCTACGGCAGATCAATAGCAAGGTCAGAGGCACCTG...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CAA 90 bp AGGCTGGGCAAGCTGCACAGTCAGCAAGCAGCACAGTTGCCCTGTCAGGAGGAGAGTGTTCTAATTTTGTaGCTATCAACTTCCCAGTCT +
Preference number: 3 (lower is better)
Translates to: RLGKLHSQQAAQLPCQEESVLIL*LSTSQS
Trigger: AGACTGGGAAGTTGATAGCAACAAAATTAGAACACT...CTCCTCCTGACAGGGCAACTGTGCTGCTTGCTGACTGTGCAGCTTGCCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
3UTR-3UTR CAA 90 bp GCAAGCTGCACAGTCAGCAAGCAGCACAGTTGCCCTGTCAGGAGGAGGCGTCTAGGTAGTGTTCTAATTTaGTTGCTATCAACTTCCCAG +
Preference number: 3 (lower is better)
Translates to: ASCTVSKQHSCPVRRRRLGSVLI*LLSTSQ
Trigger: CTGGGAAGTTGATAGCAACAAAATTAGAACACTACC...TAGACGCCTCCTCCTGACAGGGCAACTGTGCTGCTTGCTGACTGTGCAGCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
3UTR TCA 72 bp ATACTGACCTACCAGATTCTAAACAAGAGGATTACCTaGGCTCAGTGGGCCCTGCCCACCAGAATGCCAAGC +
Preference number: 3 (lower is better)
Translates to: ILTYQILNKRIT*AQWALPTRMPS
Trigger: GCTTGGCATTCTGGTGGGCAGGGCCCACTGAGCTCAGGTAATCCTCTTGTTTAGAATCTGGTAGGTCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR TCA 72 bp GGACTGAAGGCTGGATGGGATGGGCACATGAACAACTaGGATGACCTCCTCTGTATCCACTGTGTTTGGAGA +
Preference number: 3 (lower is better)
Translates to: GLKAGWDGHMNN*DDLLCIHCVWR
Trigger: TCTCCAAACACAGTGGATACAGAGGAGGTCATCTCAGTTGTTCATGTGCCCATCCCATCCAGCCTTCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR TCA 72 bp TGTGTACTTAATATCCCCAGTGTTGTGTGTGTTGTGTaGTGTGATGGACAGAGGCCGGCGAGGCTGCTTGAC +
Preference number: 3 (lower is better)
Translates to: CVLNIPSVVCVV*CDGQRPARLLD
Trigger: GTCAAGCAGCCTCGCCGGCCTCTGTCCATCACATCACACAACACACACAACACTGGGGATATTAAGTACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR GCA 72 bp CCTCAGAAAGTAAAGTTGACACCACCACACTGTGGATaGTGCAGAAGAGGGAGACTGGGGTTGGACTCTACT +
Preference number: 3 (lower is better)
Translates to: PQKVKLTPPHCG*CRRGRLGLDST
Trigger: AGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGGTGTCAACTTTACTTTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CAA 90 bp CCACCACACTGTGGATGCTGCAGAAGAGGGAGACTGGGGTTGGACTCTACTGCGTTGAGGGCTAGAATGTaGTCTTTACTCACAACTTTT +
Preference number: 3 (lower is better)
Translates to: PPHCGCCRRGRLGLDSTALRARM*SLLTTF
Trigger: AAAAGTTGTGAGTAAAGACAACATTCTAGCCCTCAA...CGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR TCA 72 bp GAAGGCTGGATGGGATGGGCACATGAACAACTGAGATaGCCTCCTCTGTATCCACTGTGTTTGGAGATTGTC +
Preference number: 3 (lower is better)
Translates to: EGWMGWAHEQLR*PPLYPLCLEIV
Trigger: GACAATCTCCAAACACAGTGGATACAGAGGAGGTCATCTCAGTTGTTCATGTGCCCATCCCATCCAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR TCA 72 bp CTGAATGTTCAGGATGATGCTCTCCAAACACTCCTGTaGGCACAAGCTGTGTTCCCTGATAAACCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: LNVQDDALQTLL*AQAVFPDKPAL
Trigger: CAGGGCAGGTTTATCAGGGAACACAGCTTGTGCTCACAGGAGTGTTTGGAGAGCATCATCCTGAACATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR GCA 72 bp CTGTTCATTAACAAGTGCTTCAGCAGGCATGGTTGCTaGCACTGGTGTTTTCTCCCTTCTTGTCAGGAAGTG +
Preference number: 3 (lower is better)
Translates to: LFINKCFSRHGC*HWCFLPSCQEV
Trigger: CACTTCCTGACAAGAAGGGAGAAAACACCAGTGGCAGCAACCATGCCTGCTGAAGCACTTGTTAATGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR GCA 72 bp ACCCCCGACTGCCATGATTTTCTGTTCATTAACAAGTaGTTCAGCAGGCATGGTTGCTGCCACTGGTGTTTT +
Preference number: 3 (lower is better)
Translates to: TPDCHDFLFINK*FSRHGCCHWCF
Trigger: AAAACACCAGTGGCAGCAACCATGCCTGCTGAAGCACTTGTTAATGAACAGAAAATCATGGCAGTCGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CCA 72 bp ATTAACAAGTGCTTCAGCAGGCATGGTTGCTGCCACTaGTGTTTTCTCCCTTCTTGTCAGGAAGTGAGATGC +
Preference number: 3 (lower is better)
Translates to: INKCFSRHGCCH*CFLPSCQEVRC
Trigger: GCATCTCACTTCCTGACAAGAAGGGAGAAAACACCAGTGGCAGCAACCATGCCTGCTGAAGCACTTGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CAA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACGTTGATGGTAAAAGGTaGTTCATCATTTTGATTCCC +
Preference number: 3 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDVDGKR*FIILIP
Trigger: GGGAATCAAAATGATGAACAACCTTTTACCATCAAC...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CCA 72 bp CTTCGACAGTGCAGCTATGGCTCCAGCTATAAACACTaGCCTCTCAGGTTTGTTTCCATGTTTCCAAATCTC +
Preference number: 3 (lower is better)
Translates to: LRQCSYGSSYKH*PLRFVSMFPNL
Trigger: GAGATTTGGAAACATGGAAACAAACCTGAGAGGCCAGTGTTTATAGCTGGAGCCATAGCTGCACTGTCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CCA 72 bp GAGCTGACCTGGCTTTCTGGAGTAAGGCATAGCACGTaGTCAAAGAACCATGGAGCTTTTGAAAAGAAAGTC +
Preference number: 3 (lower is better)
Translates to: ELTWLSGVRHST*SKNHGAFEKKV
Trigger: GACTTTCTTTTCAAAAGCTCCATGGTTCTTTGACCACGTGCTATGCCTTACTCCAGAAAGCCAGGTCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CCA 72 bp TCTGCATCGCCTATGTACAGTACAAGTGCAAACGTATaGCATTCAGACACAGTACAGAATCGAGTCAGGGGT +
Preference number: 3 (lower is better)
Translates to: SASPMYSTSANV*HSDTVQNRVRG
Trigger: ACCCCTGACTCGATTCTGTACTGTGTCTGAATGCCATACGTTTGCACTTGTACTGTACATAGGCGATGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CAA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCTTTTTAGGTTTAGACTaGAGAGCAGGCAGTTACAAG +
Preference number: 3 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRFLGLD*RAGSYK
Trigger: CTTGTAACTGCCTGCTCTCAAGTCTAAACCTAAAAA...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CAA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTAAAGATGGGTCTCCTCTaGGCCACTTCCCAGAGCCAG +
Preference number: 3 (lower is better)
Translates to: THIKIQSASPMYSTSANVKMGLL*ATSQSQ
Trigger: CTGGCTCTGGGAAGTGGCCAAGAGGAGACCCATCTT...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR TCA 72 bp GGCCTTTTTATAGAGCGGTCTTTGGTCATGACACATTaGTGTGAGCCTATGGGAAAGATGCCCACATTTGTC +
Preference number: 3 (lower is better)
Translates to: GLFIERSLVMTH*CEPMGKMPTFV
Trigger: GACAAATGTGGGCATCTTTCCCATAGGCTCACATCAATGTGTCATGACCAAAGACCGCTCTATAAAAAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR GCA 72 bp TTTCTGTTCATTAACAAGTGCTTCAGCAGGCATGGTTaGTGCCACTGGTGTTTTCTCCCTTCTTGTCAGGAA +
Preference number: 3 (lower is better)
Translates to: FLFINKCFSRHG*CHWCFLPSCQE
Trigger: TTCCTGACAAGAAGGGAGAAAACACCAGTGGCAGCAACCATGCCTGCTGAAGCACTTGTTAATGAACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CAA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCGTTGATGGTAAAAGGTaGTTCATCATTTTGATTCCC +
Preference number: 3 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRVDGKR*FIILIP
Trigger: GGGAATCAAAATGATGAACAACCTTTTACCATCAAC...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CAA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCTTGAGGGCTAGAATGTaGTCTTTACTCACAACTTTT +
Preference number: 3 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRLRARM*SLLTTF
Trigger: AAAAGTTGTGAGTAAAGACAACATTCTAGCCCTCAA...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR TCA 72 bp TTTTATAGAGCGGTCTTTGGTCATGACACATTGATGTaGGCCTATGGGAAAGATGCCCACATTTGTCCAGAA +
Preference number: 3 (lower is better)
Translates to: FYRAVFGHDTLM*AYGKDAHICPE
Trigger: TTCTGGACAAATGTGGGCATCTTTCCCATAGGCTCACATCAATGTGTCATGACCAAAGACCGCTCTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR TCA 72 bp GAAGTGCCAATTTTCAACACCATGAGAGATGTGGACTaGCTGTTTTTAAGTGCAGTATTCCATGAGAGGCTG +
Preference number: 3 (lower is better)
Translates to: EVPIFNTMRDVD*LFLSAVFHERL
Trigger: CAGCCTCTCATGGAATACTGCACTTAAAAACAGTCAGTCCACATCTCTCATGGTGTTGAAAATTGGCACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
3UTR TCA 72 bp GACAGAGATCTTTTACAATTAGCTGAATGTTCAGGATaGTGCTCTCCAAACACTCCTGTGAGCACAAGCTGT +
Preference number: 3 (lower is better)
Translates to: DRDLLQLAECSG*CSPNTPVSTSC
Trigger: ACAGCTTGTGCTCACAGGAGTGTTTGGAGAGCATCATCCTGAACATTCAGCTAATTGTAAAAGATCTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR GCA 72 bp AAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTaGAAACGTATGGCATTCAGACACAGTACAGAATCG +
Preference number: 3 (lower is better)
Translates to: KNTVCIAYVQYK*KRMAFRHSTES
Trigger: CGATTCTGTACTGTGTCTGAATGCCATACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CAA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGTCTTGTAGACATGTGTaGATGGTAAAAGGTTGTTCA +
Preference number: 3 (lower is better)
Translates to: AESSCWPETNFKQQIRLQSCRHV*MVKGCS
Trigger: TGAACAACCTTTTACCATCAACACATGTCTACAAGA...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR-3UTR CAA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTATTTTTAGGTTTAGACTaGAGAGCAGGCAGTTACAAG +
Preference number: 3 (lower is better)
Translates to: THIKIQSASPMYSTSANVFLGLD*RAGSYK
Trigger: CTTGTAACTGCCTGCTCTCAAGTCTAAACCTAAAAA...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CCA 72 bp AAATATCTACATCTCTGTGGAAATTATAACCTTAGATaGAACCTTTTGGGGTCTGACTTGAGAACACAGTCT +
Preference number: 3 (lower is better)
Translates to: KYLHLCGNYNLR*NLLGSDLRTQS
Trigger: AGACTGTGTTCTCAAGTCAGACCCCAAAAGGTTCCATCTAAGGTTATAATTTCCACAGAGATGTAGATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR-3UTR CAA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTATCTTGTAGACATGTGTaGATGGTAAAAGGTTGTTCA +
Preference number: 3 (lower is better)
Translates to: THIKIQSASPMYSTSANVSCRHV*MVKGCS
Trigger: TGAACAACCTTTTACCATCAACACATGTCTACAAGA...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR TCA 72 bp GGTTCCTTTAAACATTTTGGATTACTAATGGTTTCTTaGGGTCAAGTACTTTTGATGGATCCAAACCCTTTC +
Preference number: 3 (lower is better)
Translates to: GSFKHFGLLMVS*GQVLLMDPNPF
Trigger: GAAAGGGTTTGGATCCATCAAAAGTACTTGACCTCAAGAAACCATTAGTAATCCAAAATGTTTAAAGGAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCGATGCAGCTGAGCCCTaGGACTCCTGGCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLDAAEP*DSWLAG
Trigger: GCCAGCGAGCCAGGAGTCTCAGGGCTCAGCTGCATC...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCACTGGGCTGAGGGTCTaGTGGTCGCTGCTGCCCACG +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLTGLRV*WSLLPT
Trigger: CGTGGGCAGCAGCGACCACCAGACCCTCAGCCCAGT...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGACTGGGCTGAGGGTCTaGTGGTCGCTGCTGCCCACG +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPTGLRV*WSLLPT
Trigger: CGTGGGCAGCAGCGACCACCAGACCCTCAGCCCAGT...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCGGGCACACTGCTGGTTaGAGGAAGTGCCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSGHTAG*RKCQVC
Trigger: GCAGACTTGGCACTTCCTGCAACCAGCAGTGTGCCC...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCGGCACTGTGATGGGCTaGTGGGGGCTGGAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLGTVMG*WGLEQS
Trigger: TGACTGCTCCAGCCCCCAGCAGCCCATCACAGTGCC...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GGCTGGGCAAGCTGCACAGTCAGCAAGCAGCACAGTTGCCCTGTCAGGAGGAGGGCCGGCAGAGGAAGCTaGAGTCCTGACTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GWASCTVSKQHSCPVRRRAGRGS*SPDSPK
Trigger: CTTTGGGGAGTCAGGACTGCAGCTTCCTCTGCCGGC...CCTCCTCCTGACAGGGCAACTGTGCTGCTTGCTGACTGTGCAGCTTGCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR CCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCGGACTTGGTGCAAGATaGGCTAGAGGCCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSGLGAR*ARGPSS
Trigger: AGAGCTGGGGCCTCTAGCCCATCTTGCACCAAGTCC...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009713.14
CDS-3UTR CCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGGGGCTGAGGGTCTGGTaGTCGCTGCTGCCCACGTTT +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPGLRVW*SLLPTF
Trigger: AAACGTGGGCAGCAGCGACCACCAGACCCTCAGCCC...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCGCTTGCTGGCTAGGCTaGGTCCATTTTGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSACWLG*VHFAGV
Trigger: CACCCCTGCAAAATGGACCCAGCCTAGCCAGCAAGC...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCACTGCTGTTCTGCAGTaGGCCAGTGTCAGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSTAVLQ*ASVSGR
Trigger: TCGGCCACTGACACTGGCCCACTGCAGAACAGCAGT...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCGTCCCTGACACCAACTaGGCCTCAGAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSVPDTN*ASEVSM
Trigger: CATGGAGACCTCTGAGGCCCAGTTGGTGTCAGGGAC...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 72 bp AGCCAGGGGACTAGGGCAAGGAATGCTGTGAGGGAGTaGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SQGTRARNAVRE*AVKPLAGGPLP
Trigger: AGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACAGCATTCCTTGCCCTAGTCCCCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCACCTTTCTGACTGGCTaGGGCTGGCCCAACACGTGC +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLTFLTG*GWPNTC
Trigger: GCACGTGTTGGGCCAGCCTCAGCCAGTCAGAAAGGT...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGCTGGGCTGGAGTGCTTaGAGTCACAGGAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPLGWSA*SHRRWR
Trigger: TCGCCACCTCCTGTGACTGCAAGCACTCCAGCCCAG...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGGCAAGCTGCACAGTCAGCAAGCAGCACAGTTGCCCTGTCAGGAGGAGGCGTCGGACTTGGTGCAAGATaGGCTAGAGGCCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GQAAQSASSTVALSGGGVGLGAR*ARGPSS
Trigger: AGAGCTGGGGCCTCTAGCCCATCTTGCACCAAGTCC...GACGCCTCCTCCTGACAGGGCAACTGTGCTGCTTGCTGACTGTGCAGCTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR CCA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGAGGCTGGCCTACAGAGTaGCCAGGCACTGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: GPCPPECQASVERALFARGWPTE*PGTVMG
Trigger: GCCCATCACAGTGCCTGGCCACTCTGTAGGCCAGCC...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCCACACTGGAAACCTCTaGAAGGGCTGGCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSHTGNL*KGWLCA
Trigger: AGCACACAGCCAGCCCTTCCAGAGGTTTCCAGTGTG...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTGGGGGATCACTGGGCTaGGGGTCTGGTGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPGGSLG*GSGGRC
Trigger: GCAGCGACCACCAGACCCTCAGCCCAGTGATCCCCC...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCCTTGTCCTCCTTTGTTaGAGCCTCAGCTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSLVLLC*SLSWST
Trigger: TGTGCTCCAGCTGAGGCTGCAACAAAGGAGGACAAG...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009713.14
CDS-3UTR GCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCTGCTGTTGCTGCTGCTaGTGGCTCAGGATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLCCCCC*WLRICS
Trigger: GCTGCAGATCCTGAGCCAGCAGCAGCAGCAACAGCA...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCTGCTGCTGCTGTTGCTaGTGCTGCTGGCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLCCCCC*CCWLRI
Trigger: GATCCTGAGCCAGCAGCAGCAGCAACAGCAGCAGCA...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp AGGCTGGGCAAGCTGCACAGTCAGCAAGCAGCACAGTTGCCCTGTCAGGAGGAGGGACTTGGTGCAAGATaGGCTAGAGGCCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RLGKLHSQQAAQLPCQEEGLGAR*ARGPSS
Trigger: AGAGCTGGGGCCTCTAGCCCATCTTGCACCAAGTCC...CTCCTCCTGACAGGGCAACTGTGCTGCTTGCTGACTGTGCAGCTTGCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR CCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGTTCTGCTGCTCTGCTTaGGCCATGGGGACCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPFCCSA*AMGTSC
Trigger: GCAAGAGGTCCCCATGGCCCAAGCAGAGCAGCAGAA...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCGCTGAGTTGTCTGTGTaGTCAGTAAGGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSAELSV*SVRPEA
Trigger: AGCCTCAGGCCTTACTGACCACACAGACAACTCAGC...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACAGGTGCTATTTGGACCTaGGGCGGTGGTCGAGAGACC +
Preference number: 4 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTGAIWT*GGGRET
Trigger: GGTCTCTCGACCACCGCCCCAGGTCCAAATAGCACC...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCACAGGTGGTGCTATTTaGACCTGGGGCGGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLTGGAI*TWGGGR
Trigger: TCGACCACCGCCCCAGGTCCAAATAGCACCACCTGT...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCCCTCAGAGGTCTCCATaGGAGAGTGAGACTGGTACA +
Preference number: 4 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSPQRSP*ESETGT
Trigger: TGTACCAGTCTCACTCTCCCATGGAGACCTCTGAGG...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 72 bp CGGCGAGGCTGCTTGACTTTGCTGGCCCTGACCTGGTaGCTCTGCTGGCAGAATTCAACAGCCACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: RRGCLTLLALTW*LCWQNSTATLS
Trigger: GCTGAGAGTGGCTGTTGAATTCTGCCAGCAGAGCAACCAGGTCAGGGCCAGCAAAGTCAAGCAGCCTCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CAA 72 bp GATGTGATGGACAGAGGCCGGCGAGGCTGCTTGACTTaGCTGGCCCTGACCTGGTTGCTCTGCTGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: DVMDRGRRGCLT*LALTWLLCWQN
Trigger: ATTCTGCCAGCAGAGCAACCAGGTCAGGGCCAGCAAAGTCAAGCAGCCTCGCCGGCCTCTGTCCATCACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CAA 72 bp TTGTGTGATGTGATGGACAGAGGCCGGCGAGGCTGCTaGACTTTGCTGGCCCTGACCTGGTTGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LCDVMDRGRRGC*TLLALTWLLCW
Trigger: CCAGCAGAGCAACCAGGTCAGGGCCAGCAAAGTCAAGCAGCCTCGCCGGCCTCTGTCCATCACATCACACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GGCTGGGCAAGCTGCACAGTCAGCAAGCAGCACAGTTGCCCTGTCAGGAGGAGGGCCACAGACTCACTTTaGGGACTTGGTGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: GWASCTVSKQHSCPVRRRATDSL*GLGARW
Trigger: CCATCTTGCACCAAGTCCTCAAAGTGAGTCTGTGGC...CCTCCTCCTGACAGGGCAACTGTGCTGCTTGCTGACTGTGCAGCTTGCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR TCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGTGGGCCAGACTTCGCTaGGGACACAGTGTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPWARLR*GHSVCR
Trigger: CCTACAAACACTGTGTCCTCAGCGAAGTCTGGCCCA...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACGGACTGCTCAGAGGGTaGTGGGGAGATGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDGLLRG*WGDGQR
Trigger: CCTCTGCCCATCTCCCCATCACCCTCTGAGCAGTCC...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACAGTGAGGCCTCATCCTTaGTGGAGGACCCAACACTGC +
Preference number: 4 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTVRPHP*WRTQHC
Trigger: GCAGTGTTGGGTCCTCCATCAAGGATGAGGCCTCAC...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGGTCTCCATGGGAGAGTaGGACTGGTACAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPVSMGE*DWYSML
Trigger: CAGCATGCTGTACCAGTCTCACTCTCCCATGGAGAC...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGACTGGGCTGGAGTGCTTaGAGTCACAGGAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRLGWSA*SHRRWR
Trigger: TCGCCACCTCCTGTGACTGCAAGCACTCCAGCCCAG...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CCACCACACTGTGGATGCTGCAGAAGAGGGAGACTGGGGTTGGACTCTACTGCGTGCTGCTGCTGTTGCTaGTGCTGCTGGCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: PPHCGCCRRGRLGLDSTACCCCC*CCWLRI
Trigger: GATCCTGAGCCAGCAGCAGCAGCAACAGCAGCAGCA...CGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACGGCTGGCCCAACACGTaGTGTGGGAAGGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDGWPNT*CGKASC
Trigger: GCAGGAAGCCTTCCCACAGCACGTGTTGGGCCAGCC...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCACTCTCTATCTTCACTaGTGTTCTGCAGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSTLYLH*CSAVGQ
Trigger: CTGGCCCACTGCAGAACAGCAGTGAAGATAGAGAGT...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCTCCTGGCTCGCTGGCTaGTCTGGAGACAAAGCATCA +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLSWLAG*SGDKAS
Trigger: TGATGCTTTGTCTCCAGACCAGCCAGCGAGCCAGGA...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGACGAGGCACTGACTTTTaGCTCACTGGGGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: GPCPPECQASVERALFARRGTDF*LTGGCS
Trigger: GCTGCATCCCCCAGTGAGCCAAAAGTCAGTGCCTCG...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCTGGGTGCAGGTAGGATaGTCTGGTAGTTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSWVQVG*SGSCSA
Trigger: AGCACTACAACTACCAGACCATCCTACCTGCACCCA...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGATTGGCAACAAGGGTCTaGCTACCCGTGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: GPCPPECQASVERALFARLATRV*LPVEMG
Trigger: GCCCATCTCCACGGGTAGCCAGACCCTTGTTGCCAA...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACACGCAGTGGTACTCAGTaGAGTGAGCCCGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTRSGTQ*SEPGGC
Trigger: ACATCCTCCGGGCTCACTCCACTGAGTACCACTGCG...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTACTGGGGGATGCAGCTaGGCCCTGAGACTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPTGGCS*ALRLLA
Trigger: AGCCAGGAGTCTCAGGGCTCAGCTGCATCCCCCAGT...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACAGTCTGGTTTAGTTCCTaGCACTGGCAGACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTVWFSS*HWQTPQ
Trigger: CTGAGGGGTCTGCCAGTGTCAGGAACTAAACCAGAC...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGAGGGGCAGTTCTGGATTaGAGAGCAGGGTTAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GPCPPECQASVERALFARGAVLD*RAGLEV
Trigger: GACCTCTAACCCTGCTCTTCAATCCAGAACTGCCCC...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGTGCTACGTGCCTGCTTaGTGGCTTCCTCATATCGAG +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPCYVPA*WLPHIE
Trigger: CTCGATATGAGGAAGCCATCAAGCAGGCACGTAGCA...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GCTGGGCAAGCTGCACAGTCAGCAAGCAGCACAGTTGCCCTGTCAGGAGGAGGCTTCAGAGTGGGTAAGTaGTGGCTGGACTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: AGQAAQSASSTVALSGGGFRVGK*WLDCRD
Trigger: GTCTCTACAGTCCAGCCAGCACTTACCCACTCTGAA...GCCTCCTCCTGACAGGGCAACTGTGCTGCTTGCTGACTGTGCAGCTTGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR GCA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGAGTACTGAGACTGGACTaGTCAGAGGGTGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: GPCPPECQASVERALFARVLRLD*SEGDGE
Trigger: CTCCCCATCACCCTCTGAGCAGTCCAGTCTCAGTAC...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGTCTGGAGTTGAAGGCTaGCTACTGGGAGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPSGVEG*LLGVAL
Trigger: CAGTGCAACTCCCAGTAGGCAGCCTTCAACTCCAGA...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCGAGACTGGTACAGCATaGTGGAATGACTCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSETGTA*WNDSAS
Trigger: ACTTGCTGAGTCATTCCAGCATGCTGTACCAGTCTC...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGTGGACTCTTCAAAGGTaGCATGATGCCCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPWTLQR*HDALVH
Trigger: GTGGACCAGGGCATCATGCCACCTTTGAAGAGTCCA...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACAGCTCGCTGGCTGGTCTaGAGACAAAGCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTARWLV*RQSITA
Trigger: AGCAGTGATGCTTTGTCTCCAGACCAGCCAGCGAGC...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGAAGACTCCTGGCTCGCTaGCTGGTCTGGAGACAAAGC +
Preference number: 4 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRRLLAR*LVWRQS
Trigger: GCTTTGTCTCCAGACCAGCCAGCGAGCCAGGAGTCT...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGAAACCTCTGGAAGGGCTaGCTGTGTGCTACGTGCCTG +
Preference number: 4 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRNLWKG*LCATCL
Trigger: CAGGCACGTAGCACACAGCCAGCCCTTCCAGAGGTT...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGAGCAGAGAACATGCTTaGCGCAGTGGTACTCAGTGG +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPSREHA*RSGTQW
Trigger: CCACTGAGTACCACTGCGCCAAGCATGTTCTCTGCT...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 72 bp AGGAGCACATGTGCAGTGGCTCTTCCCCTCCCTCCCTaGTGGGTGGCCTGGTGTTTCAAGTTGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RSTCAVALPLPP*WVAWCFKLSCL
Trigger: CAAGCAGCTCAACTTGAAACACCAGGCCACCCACAAGGGAGGGAGGGGAAGAGCCACTGCACATGTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCGATGCAGCTGAGCCCTaGGACTCCTGGCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRDAAEP*DSWLAG
Trigger: GCCAGCGAGCCAGGAGTCTCAGGGCTCAGCTGCATC...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGATGGGGACCTCTTGCTTaGCGACCACAGTCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: GPCPPECQASVERALFARWGPLA*RPQSFW
Trigger: CCAAAAAGACTGTGGTCGTCAAGCAAGAGGTCCCCA...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACTGCTGTTGCTGCTGCTaGTGGCTCAGGATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDCCCCC*WLRICS
Trigger: GCTGCAGATCCTGAGCCAGCAGCAGCAGCAACAGCA...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCCGCTGTTACTGCCGCTaGTGCTGTTCTTGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLRCYCR*CCSCQF
Trigger: AAACTGACAAGAACAGCAGCAGCGGCAGTAACAGCG...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GCAAGCTGCACAGTCAGCAAGCAGCACAGTTGCCCTGTCAGGAGGAGGCGTCTACTGGCAGGTTCTAAATaGAGCCTGCAGGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: ASCTVSKQHSCPVRRRRLLAGSK*SLQEPK
Trigger: CTTGGGTTCCTGCAGGCTGCATTTAGAACCTGCCAG...TAGACGCCTCCTCCTGACAGGGCAACTGTGCTGCTTGCTGACTGTGCAGCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR CCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGTCAGCTTCATCTGTGTaGCCTGAAGAGATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPSASSV*PEEMAL
Trigger: CAGAGCCATCTCTTCAGGCCACACAGATGAAGCTGA...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACAGACTCCTGGCTCGCTaGCTGGTCTGGAGACAAAGC +
Preference number: 4 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDRLLAR*LVWRQS
Trigger: GCTTTGTCTCCAGACCAGCCAGCGAGCCAGGAGTCT...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGAGACCTTGTGGGAGGCTaGTCTGCAGTTAGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRDLVGG*SAVRGV
Trigger: AACCCCTCTAACTGCAGACCAGCCTCCCACAAGGTC...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACACGTCCGACCTTGTGGGAGGCTaGTCTGCAGTTAGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: APRGSEIAKLLSQAWDTSDLVGG*SAVRGV
Trigger: AACCCCTCTAACTGCAGACCAGCCTCCCACAAGGTC...GGACGTGTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGAAGCAACAAGGGCAGGTaGCTGTCCCTGGGAACTAAG +
Preference number: 4 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRSNKGR*LSLGTK
Trigger: CTTAGTTCCCAGGGACAGCCACCTGCCCTTGTTGCT...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGACATTTGAGCCCTGGATaGACACTGGCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRHLSPG*TLAAAA
Trigger: AGCTGCTGCTGCCAGTGTCCATCCAGGGCTCAAATG...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACGCCCAACACGTGCTGTaGGAAGGCTTCCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDAQHVL*EGFLLL
Trigger: CAGAAGCAGGAAGCCTTCCCACAGCACGTGTTGGGC...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACACCTCAGAGGTCTCCATaGGAGAGTGAGACTGGTACA +
Preference number: 4 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTPQRSP*ESETGT
Trigger: TGTACCAGTCTCACTCTCCCATGGAGACCTCTGAGG...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 72 bp TCAGTGGGCCCTGCCCACCAGAATGCCAAGCTTCAGTaGAGAGAGCGCTGTTTGCCAGAGGTTAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SVGPAHQNAKLQ*RERCLPEVKAR
Trigger: CCTGGCTTTAACCTCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 72 bp CCACACTGTGGATGCTGCAGAAGAGGGAGACTGGGGTaGGACTCTACTGCGACACTCCAGGCTTCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: PHCGCCRRGRLG*DSTATLQASKR
Trigger: CCTCTTAGAAGCCTGGAGTGTCGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCGCAAACAAAGAGTGCTaGACAACAAACTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLANKEC*TTNCWG
Trigger: ACCCCAGCAGTTTGTTGTTCAGCACTCTTTGTTTGC...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGATGCTACGTGCCTGCTTaGTGGCTTCCTCATATCGAG +
Preference number: 4 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRCYVPA*WLPHIE
Trigger: CTCGATATGAGGAAGCCATCAAGCAGGCACGTAGCA...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGTCTCTCCACTCTTTATaGGGATGTCGAAGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPSLHSL*GCRRGR
Trigger: ACGACCTCTTCGACATCCTCATAAAGAGTGGAGAGA...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACACGTCCTGTTGTGACTGGCAGTaGCACTGTGACCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: APRGSEIAKLLSQAWDTSCCDWQ*HCDLWV
Trigger: AACCCAGAGGTCACAGTGGCACTGCCAGTCACAACA...GGACGTGTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGACCTTCTCCTGAAGTTTaGGGTCCTTCTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GPCPPECQASVERALFARPSPEV*GPSQQH
Trigger: ATGCTGCTGAGAAGGACCGCAAACTTCAGGAGAAGG...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CCACCACACTGTGGATGCTGCAGAAGAGGGAGACTGGGGTTGGACTCTACTGCGCTCAGCAAGTCGTTCTaGAGATCCTCGATCAGAGAG +
Preference number: 4 (lower is better)
Translates to: PPHCGCCRRGRLGLDSTALSKSF*RSSIRE
Trigger: CTCTCTGATCGAGGATCTGCAGAACGACTTGCTGAG...CGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCAATCAGCAGAGAACATaGTTGGCGCAGTGGTACTCA +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLNQQRT*LAQWYS
Trigger: TGAGTACCACTGCGCCAAGCATGTTCTCTGCTGATT...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GGCAAGCTGCACAGTCAGCAAGCAGCACAGTTGCCCTGTCAGGAGGAGGCGTCTTCTTATTATGTCCTGTaGTCACAGACTGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GKLHSQQAAQLPCQEEASSYYVL*SQTEPA
Trigger: TGCCGGCTCAGTCTGTGAGCACAGGACATAATAAGA...AGACGCCTCCTCCTGACAGGGCAACTGTGCTGCTTGCTGACTGTGCAGCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR CCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGTGTGGCCTGAAGAGATaGCTCTGCAAACGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPCGLKR*LCKRFF
Trigger: GAAGAAACGTTTGCAGAGCCATCTCTTCAGGCCACA...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACATCAGCTTCATCTGTGTaGCCTGAAGAGATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTSASSV*PEEMAL
Trigger: CAGAGCCATCTCTTCAGGCCACACAGATGAAGCTGA...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCTGGCAAGGTTACTACTaGTCACTTCCTGGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLWQGYY*SLPGRV
Trigger: AACCCTACCAGGAAGTGACCAGTAGTAACCTTGCCA...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCGGGTCTGGCTACCCGTaGAGATGGGCTGGCCTACAG +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRGSGYP*RWAGLQ
Trigger: CTGTAGGCCAGCCCATCTCCACGGGTAGCCAGACCC...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 72 bp TCCCATGATTCCAGACAGCACCTCGTGGATCTGAGATaGCCAAGCTGCTGTCACAAGCTTGGGACACGTCCG +
Preference number: 4 (lower is better)
Translates to: SHDSRQHLVDLR*PSCCHKLGTRP
Trigger: CGGACGTGTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTGGAATCATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGATTCATCTGTGTGGCCTaGAGAGATGGCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRFICVA*RDGSAN
Trigger: GTTTGCAGAGCCATCTCTTCAGGCCACACAGATGAA...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACATGGGACCAGGCCTTTaGGCAATCTTCTCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDMGPGL*AIFSFR
Trigger: CCTGAACGAGAAGATTGCTCAAAGGCCTGGTCCCAT...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGGCTATCTTCATCAAATaGGAACTCGCCATGAGTGTG +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPAIFIK*ELAMSV
Trigger: CACACTCATGGCGAGTTCTCATTTGATGAAGATAGC...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCCGGCTCCGGATCTTGTaGTTCAGAAAATTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLRLRIL*FRKFSV
Trigger: AACTGAGAATTTTCTGAAGCACAAGATCCGGAGCCG...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTTGCTGGCTCAGGATCTaGAGCTGTAGGAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPCWLRI*SCRKSC
Trigger: GCAGCTCTTCCTACAGCTGCAGATCCTGAGCCAGCA...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACAAGGAAGTGCCAAGTCTaGCTTGAAAGTGGACACAGA +
Preference number: 4 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTRKCQV*LESGHR
Trigger: TCTGTGTCCACTTTCAAGGCAGACTTGGCACTTCCT...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAAGGCTGGCCCAACACGTaGTGTGGGAAGGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQGWPNT*CGKASC
Trigger: GCAGGAAGCCTTCCCACAGCACGTGTTGGGCCAGCC...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGATGTGGCCTGAAGAGATaGCTCTGCAAACGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GPCPPECQASVERALFARCGLKR*LCKRFF
Trigger: GAAGAAACGTTTGCAGAGCCATCTCTTCAGGCCACA...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGACGGTGTTTGTCGTTTaGATTCTTGGGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPTVFVV*ILGMAL
Trigger: CAAAGCCATCCCAAGAATCCAAACGACAAACACCGT...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACACGTCCTGCCACTGTGACCTCTaGGTTACTGGTGACAATGGT +
Preference number: 4 (lower is better)
Translates to: APRGSEIAKLLSQAWDTSCHCDL*VTGDNG
Trigger: ACCATTGTCACCAGTAACCCAGAGGTCACAGTGGCA...GGACGTGTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTCATTTGAGCCCTGGATaGACACTGGCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPHLSPG*TLAAAA
Trigger: AGCTGCTGCTGCCAGTGTCCATCCAGGGCTCAAATG...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCCTGACAAAGGGCTGCTaGTTCGTTGGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRLTKGC*FVGPGC
Trigger: GCAGCCTGGCCCAACGAACCAGCAGCCCTTTGTCAG...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 72 bp GGAACAGTTCAGGGTGTAGATAAGATGGGTCTCCTCTaGGCCACTTCCCAGAGCCAGGTCTGCTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: GTVQGVDKMGLL*ATSQSQVCCGK
Trigger: TTTCCCACAGCAGACCTGGCTCTGGGAAGTGGCCAAGAGGAGACCCATCTTATCTACACCCTGAACTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCGTGAGGCCTCATCCTTaGTGGAGGACCCAACACTGC +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRVRPHP*WRTQHC
Trigger: GCAGTGTTGGGTCCTCCATCAAGGATGAGGCCTCAC...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGAGCAAACAAAGAGTGCTaGACAACAAACTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRANKEC*TTNCWG
Trigger: ACCCCAGCAGTTTGTTGTTCAGCACTCTTTGTTTGC...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACCGCTGTTACTGCCGCTaGTGCTGTTCTTGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDRCYCR*CCSCQF
Trigger: AAACTGACAAGAACAGCAGCAGCGGCAGTAACAGCG...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACCCTTCTCCTGAAGTTTaGGGTCCTTCTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDPSPEV*GPSQQH
Trigger: ATGCTGCTGAGAAGGACCGCAAACTTCAGGAGAAGG...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CAACACACGAATGGACCCCCGACTGCCATGATTTTCTGTTCATTAACAAGTGCTGGCACTGTGATGGGCTaGTGGGGGCTGGAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QHTNGPPTAMIFCSLTSAGTVMG*WGLEQS
Trigger: TGACTGCTCCAGCCCCCAGCAGCCCATCACAGTGCC...AGCACTTGTTAATGAACAGAAAATCATGGCAGTCGGGGGTCCATTCGTGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp TTTTTAAGTGCAGTATTCCATGAGAGGCTGGGCAAGCTGCACAGTCAGCAAGCAGCCGGCAGAGGAAGCTaGAGTCCTGACTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: FLSAVFHERLGKLHSQQAAGRGS*SPDSPK
Trigger: CTTTGGGGAGTCAGGACTGCAGCTTCCTCTGCCGGC...TGCTTGCTGACTGTGCAGCTTGCCCAGCCTCTCATGGAATACTGCACTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCCGAGGCACTGACTTTTaGCTCACTGGGGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRRGTDF*LTGGCS
Trigger: GCTGCATCCCCCAGTGAGCCAAAAGTCAGTGCCTCG...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGATGTCGTTTGGATTCTTaGGATGGCTTTGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GPCPPECQASVERALFARCRLDS*DGFASP
Trigger: TGGTGAAGCAAAGCCATCCCAAGAATCCAAACGACA...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTATGGGCAGAGGAGAGTaGGCATTTTCAACATGGGGC +
Preference number: 4 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPMGRGE*AFSTWG
Trigger: GCCCCATGTTGAAAATGCCCACTCTCCTCTGCCCAT...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGGATGAACACAACAACTaGGAAGGTGACATCATAGTC +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPDEHNN*EGDIIV
Trigger: GACTATGATGTCACCTTCCCAGTTGTTGTGTTCATC...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACCGACCACAGTCTTTTTaGCAACAAGGGTCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDRPQSF*QQGSGY
Trigger: GTAGCCAGACCCTTGTTGCCAAAAAGACTGTGGTCG...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCACAGGTGGTGCTATTTaGACCTGGGGCGGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRTGGAI*TWGGGR
Trigger: TCGACCACCGCCCCAGGTCCAAATAGCACCACCTGT...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACAAAGAAGGCTTCTAGCTaGTTCTCTAAGCTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTKKASS*FSKLAD
Trigger: ATCTGCCAGCTTAGAGAACCAGCTAGAAGCCTTCTT...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 72 bp CAGCAGTGGGTCCCTGTGTACTTAATATCCCCAGTGTaGTGTGTGTTGTGTGATGTGATGGACAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: QQWVPVYLISPV*CVLCDVMDRGR
Trigger: CCGGCCTCTGTCCATCACATCACACAACACACACAACACTGGGGATATTAAGTACACAGGGACCCACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TTAAGTGCAGTATTCCATGAGAGGCTGGGCAAGCTGCACAGTCAGCAAGCAGCAGCCACAGACTCACTTTaGGGACTTGGTGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: LSAVFHERLGKLHSQQAAATDSL*GLGARW
Trigger: CCATCTTGCACCAAGTCCTCAAAGTGAGTCTGTGGC...TGCTGCTTGCTGACTGTGCAGCTTGCCCAGCCTCTCATGGAATACTGCACTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR TCA 90 bp GCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACACGTCCGCTATCTTCATCAAATaGGAACTCGCCATGAGTGTG +
Preference number: 4 (lower is better)
Translates to: APRGSEIAKLLSQAWDTSAIFIK*ELAMSV
Trigger: CACACTCATGGCGAGTTCTCATTTGATGAAGATAGC...GGACGTGTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp AGGCTGGGCAAGCTGCACAGTCAGCAAGCAGCACAGTTGCCCTGTCAGGAGGAGAAGACTAGTGGCAAATaGGGCTTCTTGCTTTTCTTA +
Preference number: 4 (lower is better)
Translates to: RLGKLHSQQAAQLPCQEEKTSGK*GFLLFL
Trigger: TAAGAAAAGCAAGAAGCCTCATTTGCCACTAGTCTT...CTCCTCCTGACAGGGCAACTGTGCTGCTTGCTGACTGTGCAGCTTGCCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR GCA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTCTGCTCATGGAATGCTaGTGGACTCTTCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPLLMEC*WTLQRW
Trigger: CCACCTTTGAAGAGTCCAGCAGCATTCCATGAGCAG...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGATTTGGATTCTTGGGATaGCTTTGCTTCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: GPCPPECQASVERALFARFGFLG*LCFTSI
Trigger: AATGCTGGTGAAGCAAAGCCATCCCAAGAATCCAAA...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCGTTGGAGTCCATCTGTaGCTCGCTCTTCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRVGVHL*LALLPL
Trigger: AAGGGGGAGAAGAGCGAGCCACAGATGGACTCCAAC...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCTGTTGCTGCTGCTGCTaGCTCAGGATCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRCCCCC*LRICSC
Trigger: ACAGCTGCAGATCCTGAGCCAGCAGCAGCAGCAACA...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTTGCCACTGTGACCTCTaGGTTACTGGTGACAATGGT +
Preference number: 4 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPCHCDL*VTGDNG
Trigger: ACCATTGTCACCAGTAACCCAGAGGTCACAGTGGCA...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGAGGCTCTTCTTTTATTaGGAAGGAAATCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: AAGCPECSGASDLAIDLPRLFFY*EGNLST
Trigger: AGTGGAGAGATTTCCTTCCCAATAAAAGAAGAGCCT...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCGCCACAGACTCACTTTaGGGACTTGGTGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRATDSL*GLGARW
Trigger: CCATCTTGCACCAAGTCCTCAAAGTGAGTCTGTGGC...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009713.14
CDS-3UTR TCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAAACTGGGGGATGCAGCTaGGCCCTGAGACTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGETGGCS*ALRLLA
Trigger: AGCCAGGAGTCTCAGGGCTCAGCTGCATCCCCCAGT...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp CAACACACGAATGGACCCCCGACTGCCATGATTTTCTGTTCATTAACAAGTGCTGGAGCAGTCAGGGAGTaGGGCCTCATCCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: QHTNGPPTAMIFCSLTSAGAVRE*GLILDG
Trigger: TCCATCAAGGATGAGGCCTCACTCCCTGACTGCTCC...AGCACTTGTTAATGAACAGAAAATCATGGCAGTCGGGGGTCCATTCGTGTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCTGGGGACCTCTTGCTTaGCGACCACAGTCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRWGPLA*RPQSFW
Trigger: CCAAAAAGACTGTGGTCGTCAAGCAAGAGGTCCCCA...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCGTTTCTTCTAAAATATaGATCCTGACAAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLVSSKI*ILTSSE
Trigger: CTCTGAGCTTGTCAGGATGCATATTTTAGAAGAAAC...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACTGTAGGAAGAGCTGCTaGTGCTGGAGCAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDCRKSC*CWSRRA
Trigger: TGCCCGCCTGCTCCAGCAGCAGCAGCTCTTCCTACA...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAATGGCTGTGTGCTACGTaGCTGCTTGATGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQWLCAT*LLDGFL
Trigger: GAGGAAGCCATCAAGCAGGCACGTAGCACACAGCCA...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp AGGCTGGGCAAGCTGCACAGTCAGCAAGCAGCACAGTTGCCCTGTCAGGAGGAGGCAAATGAGGCTTCTTaGTTTTCTTATTATGTCCTG +
Preference number: 4 (lower is better)
Translates to: RLGKLHSQQAAQLPCQEEANEAS*FSYYVL
Trigger: CAGGACATAATAAGAAAAGCAAGAAGCCTCATTTGC...CTCCTCCTGACAGGGCAACTGTGCTGCTTGCTGACTGTGCAGCTTGCCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR CCA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTCTCATGGAATGCTGCTaGACTCTTCAAAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPLMECC*TLQRWH
Trigger: ATGCCACCTTTGAAGAGTCCAGCAGCATTCCATGAG...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGATTTGGATTCTTGGGATaGCTTTGCTTCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRFGFLG*LCFTSI
Trigger: AATGCTGGTGAAGCAAAGCCATCCCAAGAATCCAAA...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTCCACAATACTGCCAGTaGCAAGGTTACTACTGGTCA +
Preference number: 4 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPPQYCQ*QGYYWS
Trigger: TGACCAGTAGTAACCTTGCCACTGGCAGTATTGTGG...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCATGGGCAGAGGAGAGTaGGCATTTTCAACATGGGGC +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRMGRGE*AFSTWG
Trigger: GCCCCATGTTGAAAATGCCCACTCTCCTCTGCCCAT...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGGCTGGCCTACAGAGTaGCCAGGCACTGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKGWPTE*PGTVMG
Trigger: GCCCATCACAGTGCCTGGCCACTCTGTAGGCCAGCC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCTTGCAGGGGTGCAAGTaGGGCAGTTCTGGATTGAAG +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRLQGCK*GSSGLK
Trigger: CTTCAATCCAGAACTGCCCCACTTGCACCCCTGCAA...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACATCACTGGTTTCATCTTaGAAATTGGAGAAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTSLVSS*KLEKAL
Trigger: AAGAGCCTTCTCCAATTTCCAAGATGAAACCAGTGA...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACAAGAAGGCTTCTAGCTaGTTCTCTAAGCTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDKKASS*FSKLAD
Trigger: ATCTGCCAGCTTAGAGAACCAGCTAGAAGCCTTCTT...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACTCCTTGAGACTTTTCTaGTTGCTTCCCTCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDSLRLF*LLPSRH
Trigger: ATGCCTTGAGGGAAGCAACCAGAAAAGTCTCAAGGA...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CAA 72 bp GTACTGCCGCAGCCTCAGAGGCTTCTGAGAGAGGCCTaGCTGAAATTTCACAGCCACATCAGCTTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: VLPQPQRLLREA*LKFHSHISFLE
Trigger: TTCTAGAAAGCTGATGTGGCTGTGAAATTTCAGCAAGGCCTCTCTCAGAAGCCTCTGAGGCTGCGGCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCCCTCTGGGTTACTGGTaGCAATGGTTGCTGATGACA +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRPLGYW*QWLLMT
Trigger: TGTCATCAGCAACCATTGTCACCAGTAACCCAGAGG...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGGGACTGCTCAGAGGGTaGTGGGGAGATGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQGLLRG*WGDGQR
Trigger: CCTCTGCCCATCTCCCCATCACCCTCTGAGCAGTCC...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTAGGGGGATCACTGGGCTaGGGGTCTGGTGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: THIKIQSASPMYSTSANVGGSLG*GSGGRC
Trigger: GCAGCGACCACCAGACCCTCAGCCCAGTGATCCCCC...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGCTGGGGTCTGGAGTTaGAGGCTGCCTACTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKAGVWS*RLPTGS
Trigger: ACTCCCAGTAGGCAGCCTTCAACTCCAGACCCCAGC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAAACCTTTCTGACTGGCTaGGGCTGGCCCAACACGTGC +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGETFLTG*GWPNTC
Trigger: GCACGTGTTGGGCCAGCCTCAGCCAGTCAGAAAGGT...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCTTCAGAGTGGGTAAGTaGTGGCTGGACTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRFRVGK*WLDCRD
Trigger: GTCTCTACAGTCCAGCCAGCACTTACCCACTCTGAA...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009713.14
CDS-3UTR GCA 90 bp CCACCACACTGTGGATGCTGCAGAAGAGGGAGACTGGGGTTGGACTCTACTGCGGTTTCTTCTAAAATATaGATCCTGACAAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PPHCGCCRRGRLGLDSTAVSSKI*ILTSSE
Trigger: CTCTGAGCTTGTCAGGATGCATATTTTAGAAGAAAC...CGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATGTAGGAAGAGCTGCTaGTGCTGGAGCAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKCRKSC*CWSRRA
Trigger: TGCCCGCCTGCTCCAGCAGCAGCAGCTCTTCCTACA...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAATCGCCGGCATGCTGCTaGTACTGCCGCTGTTACTGC +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGESPACC*YCRCYC
Trigger: GCAGTAACAGCGGCAGTAGCAGCAGCATGCCGGCGA...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCCTCAGCAAGTCGTTCTaGAGATCCTCGATCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRLSKSF*RSSIRE
Trigger: CTCTCTGATCGAGGATCTGCAGAACGACTTGCTGAG...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCTGTTGCAGCCTCAGCTaGAGCACATTTTTCCGTTCG +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRCCSLS*STFFRS
Trigger: CGAACGGAAAAATGTGCTCCAGCTGAGGCTGCAACA...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009713.14
CDS-3UTR CCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAATGGACTCTTCAAAGGTaGCATGATGCCCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQWTLQR*HDALVH
Trigger: GTGGACCAGGGCATCATGCCACCTTTGAAGAGTCCA...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGGGGTCTGGCTACCCGTaGAGATGGGCTGGCCTACAG +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQGSGYP*RWAGLQ
Trigger: CTGTAGGCCAGCCCATCTCCACGGGTAGCCAGACCC...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACGCTTGCTGGCTAGGCTaGGTCCATTTTGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDACWLG*VHFAGV
Trigger: CACCCCTGCAAAATGGACCCAGCCTAGCCAGCAAGC...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACAACCTCTGGAAGGGCTaGCTGTGTGCTACGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDNLWKG*LCATCL
Trigger: CAGGCACGTAGCACACAGCCAGCCCTTCCAGAGGTT...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCTGTTGCAGCCTCAGCTaGAGCACTTCCTTGAGACTT +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRCCSLS*STSLRL
Trigger: AAGTCTCAAGGAAGTGCTCCAGCTGAGGCTGCAACA...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAACCTCTGGGTTACTGGTaGCAATGGTTGCTGATGACA +
Preference number: 4 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQPLGYW*QWLLMT
Trigger: TGTCATCAGCAACCATTGTCACCAGTAACCCAGAGG...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGTCGCCGGCATGCTGCTaGTACTGCCGCTGTTACTGC +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQSPACC*YCRCYC
Trigger: GCAGTAACAGCGGCAGTAGCAGCAGCATGCCGGCGA...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGGGCACACTGCTGGTTaGAGGAAGTGCCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKGHTAG*RKCQVC
Trigger: GCAGACTTGGCACTTCCTGCAACCAGCAGTGTGCCC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACGTACTGAGACTGGACTaGTCAGAGGGTGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDVLRLD*SEGDGE
Trigger: CTCCCCATCACCCTCTGAGCAGTCCAGTCTCAGTAC...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACTCTGGTGGTCGCTGCTaGCCACGTTTTTCCACCTCA +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDSGGRC*PRFSTS
Trigger: TGAGGTGGAAAAACGTGGGCAGCAGCGACCACCAGA...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAAACTCTCTATCTTCACTaGTGTTCTGCAGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQTLYLH*CSAVGQ
Trigger: CTGGCCCACTGCAGAACAGCAGTGAAGATAGAGAGT...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTGGCAACAAGGGTCTaGCTACCCGTGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKLATRV*LPVEMG
Trigger: GCCCATCTCCACGGGTAGCCAGACCCTTGTTGCCAA...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAACGACCACAGTCTTTTTaGCAACAAGGGTCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQRPQSF*QQGSGY
Trigger: GTAGCCAGACCCTTGTTGCCAAAAAGACTGTGGTCG...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACAGCAACAAGGGCAGGTaGCTGTCCCTGGGAACTAAG +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDSNKGR*LSLGTK
Trigger: CTTAGTTCCCAGGGACAGCCACCTGCCCTTGTTGCT...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGCCCTGGATGGACACTaGCAGCAGCAGCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKALDGH*QQQLSC
Trigger: ACAACTCAGCTGCTGCTGCCAGTGTCCATCCAGGGC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGGGTGCTATTTGGACCTaGGGCGGTGGTCGAGAGACC +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQGAIWT*GGGRET
Trigger: GGTCTCTCGACCACCGCCCCAGGTCCAAATAGCACC...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAAACTGCTGTTCTGCAGTaGGCCAGTGTCAGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGETAVLQ*ASVSGR
Trigger: TCGGCCACTGACACTGGCCCACTGCAGAACAGCAGT...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCACTGGTACAGCATGCTaGAATGACTCAGCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRTGTAC*NDSASR
Trigger: ACGACTTGCTGAGTCATTCCAGCATGCTGTACCAGT...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGTCCCTGACACCAACTaGGCCTCAGAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKVPDTN*ASEVSM
Trigger: CATGGAGACCTCTGAGGCCCAGTTGGTGTCAGGGAC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAACCATGTTGTCCAGGTTaGAGTCTGACAGGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQPCCPG*SLTGQE
Trigger: CTCTTGACCTGTCAGACTCCAACCTGGACAACATGG...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAACGCAGTGGTACTCAGTaGAGTGAGCCCGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKRSGTQ*SEPGGC
Trigger: ACATCCTCCGGGCTCACTCCACTGAGTACCACTGCG...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 72 bp CACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTaGCCAGAGGTTAAAGCCAGGAAAAGGGACCATTTT +
Preference number: 4 (lower is better)
Translates to: HQNAKLQLRERC*PEVKARKRDHF
Trigger: AAAATGGTCCCTTTTCCTGGCTTTAACCTCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAAGTCTGGTTTAGTTCCTaGCACTGGCAGACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGEVWFSS*HWQTPQ
Trigger: CTGAGGGGTCTGCCAGTGTCAGGAACTAAACCAGAC...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGGGGCAGTTCTGGATTaGAGAGCAGGGTTAGAGGTC +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKGAVLD*RAGLEV
Trigger: GACCTCTAACCCTGCTCTTCAATCCAGAACTGCCCC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAAAGGTCGTCCATCTGCTaGCTGTGCACACTGGAAACC +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGERSSIC*LCTLET
Trigger: GGTTTCCAGTGTGCACAGTCAGCAGATGGACGACCT...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAAGTCTCCATGGGAGAGTaGGACTGGTACAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGEVSMGE*DWYSML
Trigger: CAGCATGCTGTACCAGTCTCACTCTCCCATGGAGAC...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp CCCTGTCAGGAGGAGGCGTCTATTCCAGGTAGTGTTCTAATTTTGTTGCTATCAAGGAAGCTGCAGTCCTaGCTCCCCAAAGACTATACT +
Preference number: 4 (lower is better)
Translates to: PCQEEASIPGSVLILLLSRKLQS*LPKDYT
Trigger: AGTATAGTCTTTGGGGAGTCAGGACTGCAGCTTCCT...TGATAGCAACAAAATTAGAACACTACCTGGAATAGACGCCTCCTCCTGACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR GCA 90 bp CCCTGTCAGGAGGAGGCGTCTATTCCAGGTAGTGTTCTAATTTTGTTGCTATCATTCAGAGTGGGTAAGTaGTGGCTGGACTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: PCQEEASIPGSVLILLLSFRVGK*WLDCRD
Trigger: GTCTCTACAGTCCAGCCAGCACTTACCCACTCTGAA...TGATAGCAACAAAATTAGAACACTACCTGGAATAGACGCCTCCTCCTGACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR GCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGTGCTGCTGTTGCTGCTaGTGCTGGCTCAGGATCTGC +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQCCCCC*CWLRIC
Trigger: GCAGATCCTGAGCCAGCAGCAGCAGCAACAGCAGCA...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAATCTGGTGGTCGCTGCTaGCCACGTTTTTCCACCTCA +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGESGGRC*PRFSTS
Trigger: TGAGGTGGAAAAACGTGGGCAGCAGCGACCACCAGA...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCCTTCGTGATTGGGGTTaGAAACAAAGAGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRLRDWG*KQRVLN
Trigger: GTTCAGCACTCTTTGTTTGCAACCCCAATCACGAAG...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCTGTCGTTTGGATTCTTaGGATGGCTTTGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRCRLDS*DGFASP
Trigger: TGGTGAAGCAAAGCCATCCCAAGAATCCAAACGACA...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGTTGGAGTCCATCTGTaGCTCGCTCTTCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKVGVHL*LALLPL
Trigger: AAGGGGGAGAAGAGCGAGCCACAGATGGACTCCAAC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATGTTGCTGCTGCTGCTaGCTCAGGATCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKCCCCC*LRICSC
Trigger: ACAGCTGCAGATCCTGAGCCAGCAGCAGCAGCAACA...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGGGCTGAGGGTCTGGTaGTCGCTGCTGCCCACGTTT +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSGLRVW*SLLPTF
Trigger: AAACGTGGGCAGCAGCGACCACCAGACCCTCAGCCC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTAGGCTCTTCTTTTATTaGGAAGGAAATCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPRLFFY*EGNLST
Trigger: AGTGGAGAGATTTCCTTCCCAATAAAAGAAGAGCCT...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACTTCATCTGTGTGGCCTaGAGAGATGGCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDFICVA*RDGSAN
Trigger: GTTTGCAGAGCCATCTCTTCAGGCCACACAGATGAA...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAAGTGCCAAGTCTGCCTTaGAAGTGGACACAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGEVPSLP*KWTQSL
Trigger: CAAGCTCTGTGTCCACTTTCAAGGCAGACTTGGCAC...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGCTGGGGTCTGGAGTTaGAGGCTGCCTACTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSAGVWS*RLPTGS
Trigger: ACTCCCAGTAGGCAGCCTTCAACTCCAGACCCCAGC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp CAGGAGGAGGCGTCTATTCCAGGTAGTGTTCTAATTTTGTTGCTATCAACTTCCAGGAAGCTGCAGTCCTaGCTCCCCAAAGACTATACT +
Preference number: 4 (lower is better)
Translates to: QEEASIPGSVLILLLSTSRKLQS*LPKDYT
Trigger: AGTATAGTCTTTGGGGAGTCAGGACTGCAGCTTCCT...GGAAGTTGATAGCAACAAAATTAGAACACTACCTGGAATAGACGCCTCCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR GCA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTGAGACAAAGCATCACTaGTATCTTCATCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPETKHH*YLHQMR
Trigger: TCTCATTTGATGAAGATAGCAGTGATGCTTTGTCTC...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAATGTTGTGACTGGCAGTaGCACTGTGACCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGECCDWQ*HCDLWV
Trigger: AACCCAGAGGTCACAGTGGCACTGCCAGTCACAACA...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGTGGCTGTGTGCTACGTaGCTGCTTGATGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQWLCAT*LLDGFL
Trigger: GAGGAAGCCATCAAGCAGGCACGTAGCACACAGCCA...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CAACACACGAATGGACCCCCGACTGCCATGATTTTCTGTTCATTAACAAGTGCTAATCAGCAGAGAACATaGTTGGCGCAGTGGTACTCA +
Preference number: 4 (lower is better)
Translates to: QHTNGPPTAMIFCSLTSANQQRT*LAQWYS
Trigger: TGAGTACCACTGCGCCAAGCATGTTCTCTGCTGATT...AGCACTTGTTAATGAACAGAAAATCATGGCAGTCGGGGGTCCATTCGTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CCCTGTCAGGAGGAGGCGTCTATTCCAGGTAGTGTTCTAATTTTGTTGCTATCATCTTATTATGTCCTGTaGTCACAGACTGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PCQEEASIPGSVLILLLSSYYVL*SQTEPA
Trigger: TGCCGGCTCAGTCTGTGAGCACAGGACATAATAAGA...TGATAGCAACAAAATTAGAACACTACCTGGAATAGACGCCTCCTCCTGACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR GCA 90 bp TGTCAGGAGGAGGCGTCTATTCCAGGTAGTGTTCTAATTTTGTTGCTATCAACTCTGGCAGGTTCTAAATaGAGCCTGCAGGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: CQEEASIPGSVLILLLSTLAGSK*SLQEPK
Trigger: CTTGGGTTCCTGCAGGCTGCATTTAGAACCTGCCAG...AGTTGATAGCAACAAAATTAGAACACTACCTGGAATAGACGCCTCCTCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR GCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGGGAAGCCTTGTGGCTaGTTCTTGGAGCTATCGATC +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKGKPCG*FLELSI
Trigger: GATCGATAGCTCCAAGAAGCAGCCACAAGGCTTCCC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACGGTGGCATGATGCCCTaGTCCACTAGTTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDGGMMP*STSCSL
Trigger: AAGAGAACAACTAGTGGACCAGGGCATCATGCCACC...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGCAGGCGGGCATAGTTaGAGTCCATCTGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSAGGHS*SPSVAR
Trigger: GCGAGCCACAGATGGACTCCAACTATGCCCGCCTGC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTAGCAGGCGGGCATAGTTaGAGTCCATCTGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: THIKIQSASPMYSTSANVAGGHS*SPSVAR
Trigger: GCGAGCCACAGATGGACTCCAACTATGCCCGCCTGC...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAAGCTGAGTTGTCTGTGTaGTCAGTAAGGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGEAELSV*SVRPEA
Trigger: AGCCTCAGGCCTTACTGACCACACAGACAACTCAGC...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGCACACTGGAAACCTCTaGAAGGGCTGGCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQHTGNL*KGWLCA
Trigger: AGCACACAGCCAGCCCTTCCAGAGGTTTCCAGTGTG...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 72 bp CTCTCACACTTGGCTTCCAGGCTGTGGCCTTCCTTTTaGTCTGTGACAATGTATTTTGACTTCGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: LSHLASRLWPSF*SVTMYFDFDSA
Trigger: TGCACTGTCGAAGTCAAAATACATTGTCACAGACAAAAAGGAAGGCCACAGCCTGGAAGCCAAGTGTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 72 bp CACATTGATGTGAGCCTATGGGAAAGATGCCCACATTaGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: HIDVSLWERCPH*SRTCARGLSSV
Trigger: GACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCCCATAGGCTCACATCAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATCTTCAAAGGTGGCATaGTGCCCTGGTCCACTAGTT +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKSSKVA*CPGPLV
Trigger: AACTAGTGGACCAGGGCATCATGCCACCTTTGAAGA...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAATCTTCAAAGGTGGCATaGTGCCCTGGTCCACTAGTT +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGESSKVA*CPGPLV
Trigger: AACTAGTGGACCAGGGCATCATGCCACCTTTGAAGA...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGATGGGACCAGGCCTTTaGGCAATCTTCTCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQMGPGL*AIFSFR
Trigger: CCTGAACGAGAAGATTGCTCAAAGGCCTGGTCCCAT...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACTGTTCTTGTCAGTTTTaGTGGGTGCAGGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDCSCQF*WVQVGW
Trigger: CCATCCTACCTGCACCCATCAAAACTGACAAGAACA...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGGAGCAGTCAGGGAGTaGGGCCTCATCCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSGAVRE*GLILDG
Trigger: TCCATCAAGGATGAGGCCTCACTCCCTGACTGCTCC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTATGCTGCTGTTGCTGCTaGTGCTGGCTCAGGATCTGC +
Preference number: 4 (lower is better)
Translates to: THIKIQSASPMYSTSANVCCCCC*CWLRIC
Trigger: GCAGATCCTGAGCCAGCAGCAGCAGCAACAGCAGCA...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACAGGAAGTGCCAAGTCTaGCTTGAAAGTGGACACAGA +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDRKCQV*LESGHR
Trigger: TCTGTGTCCACTTTCAAGGCAGACTTGGCACTTCCT...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATGGGTGCAGGTAGGATaGTCTGGTAGTTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKWVQVG*SGSCSA
Trigger: AGCACTACAACTACCAGACCATCCTACCTGCACCCA...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACCCACAATACTGCCAGTaGCAAGGTTACTACTGGTCA +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDPQYCQ*QGYYWS
Trigger: TGACCAGTAGTAACCTTGCCACTGGCAGTATTGTGG...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTAGCCCTGGATGGACACTaGCAGCAGCAGCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: THIKIQSASPMYSTSANVALDGH*QQQLSC
Trigger: ACAACTCAGCTGCTGCTGCCAGTGTCCATCCAGGGC...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGCCCAACACGTGCTGTaGGAAGGCTTCCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSAQHVL*EGFLLL
Trigger: CAGAAGCAGGAAGCCTTCCCACAGCACGTGTTGGGC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CAACACACGAATGGACCCCCGACTGCCATGATTTTCTGTTCATTAACAAGTGCTGATGCTGGCTGTCACTaGTTTCATCTTGGAAATTGG +
Preference number: 4 (lower is better)
Translates to: QHTNGPPTAMIFCSLTSADAGCH*FHLGNW
Trigger: CCAATTTCCAAGATGAAACCAGTGACAGCCAGCATC...AGCACTTGTTAATGAACAGAAAATCATGGCAGTCGGGGGTCCATTCGTGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAACCATGTTGTCCAGGTTaGAGTCTGACAGGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKPCCPG*SLTGQE
Trigger: CTCTTGACCTGTCAGACTCCAACCTGGACAACATGG...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTATGGGCCAGACTTCGCTaGGGACACAGTGTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: THIKIQSASPMYSTSANVWARLR*GHSVCR
Trigger: CCTACAAACACTGTGTCCTCAGCGAAGTCTGGCCCA...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATGTTCTTGTCAGTTTTaGTGGGTGCAGGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKCSCQF*WVQVGW
Trigger: CCATCCTACCTGCACCCATCAAAACTGACAAGAACA...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTAGGTCGTCCATCTGCTaGCTGTGCACACTGGAAACC +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSRSSIC*LCTLET
Trigger: GGTTTCCAGTGTGCACAGTCAGCAGATGGACGACCT...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACCGGCTCCGGATCTTGTaGTTCAGAAAATTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDRLRIL*FRKFSV
Trigger: AACTGAGAATTTTCTGAAGCACAAGATCCGGAGCCG...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAACTCATGGAATGCTGCTaGACTCTTCAAAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGELMECC*TLQRWH
Trigger: ATGCCACCTTTGAAGAGTCCAGCAGCATTCCATGAG...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGCTCGCTGGCTGGTCTaGAGACAAAGCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSARWLV*RQSITA
Trigger: AGCAGTGATGCTTTGTCTCCAGACCAGCCAGCGAGC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTTCCTGGCTCGCTGGCTaGTCTGGAGACAAAGCATCA +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSSWLAG*SGDKAS
Trigger: TGATGCTTTGTCTCCAGACCAGCCAGCGAGCCAGGA...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACGCTGGTTCTCTAAGCTaGCAGATAAACTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDAGSLS*QINCSQ
Trigger: CTGTGAACAGTTTATCTGCCAGCTTAGAGAACCAGC...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGTGCCAAGTCTGCCTTaGAAGTGGACACAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSVPSLP*KWTQSL
Trigger: CAAGCTCTGTGTCCACTTTCAAGGCAGACTTGGCAC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGTGTTTCTCCTTCTCCTaGAGTTTGCGGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQCFSFS*SLRSFS
Trigger: TGAGAAGGACCGCAAACTTCAGGAGAAGGAGAAACA...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAATATCTGCTCATGGAATaGTGCTGGACTCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TVEVTRSKHIPMSNITGEYLLME*CWTLQR
Trigger: CCTTTGAAGAGTCCAGCAGCATTCCATGAGCAGATA...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATCCAGGCTTTTTATCTaGTCATGGAATGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKSRLFI*SWNAAG
Trigger: TCCAGCAGCATTCCATGAGCAGATAAAAAGCCTGGA...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTACTTGTCCTCCTTTGTTaGAGCCTCAGCTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: THIKIQSASPMYSTSANVLVLLC*SLSWST
Trigger: AGTGCTCCAGCTGAGGCTGCAACAAAGGAGGACAAG...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGTGGCAAGGTTACTACTaGTCACTTCCTGGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQWQGYY*SLPGRV
Trigger: AACCCTACCAGGAAGTGACCAGTAGTAACCTTGCCA...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTATTGCAGGGGTGCAAGTaGGGCAGTTCTGGATTGAAG +
Preference number: 4 (lower is better)
Translates to: THIKIQSASPMYSTSANVLQGCK*GSSGLK
Trigger: CTTCAATCCAGAACTGCCCCACTTGCACCCCTGCAA...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGATGCTGGCTGTCACTaGTTTCATCTTGGAAATTGG +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKDAGCH*FHLGNW
Trigger: CCAATTTCCAAGATGAAACCAGTGACAGCCAGCATC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGCCATGTTTAGGATCTaGTGTATTAAAGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKAMFRI*CIKGMW
Trigger: CCACATCCCTTTAATACATCAGATCCTAAACATGGC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp CAGGAGGAGGCGTCTATTCCAGGTAGTGTTCTAATTTTGTTGCTATCAACTTCCAAGACTAGTGGCAAATaGGGCTTCTTGCTTTTCTTA +
Preference number: 4 (lower is better)
Translates to: QEEASIPGSVLILLLSTSKTSGK*GFLLFL
Trigger: TAAGAAAAGCAAGAAGCCTCATTTGCCACTAGTCTT...GGAAGTTGATAGCAACAAAATTAGAACACTACCTGGAATAGACGCCTCCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR TCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGCTGGAGCACTTCCTTaGGACTTTTCTGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSAGALP*DFSGCF
Trigger: GAAGCAACCAGAAAAGTCTCAAGGAAGTGCTCCAGC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGTATCTGCTCATGGAATaGTGCTGGACTCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQYLLME*CWTLQR
Trigger: CCTTTGAAGAGTCCAGCAGCATTCCATGAGCAGATA...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGTCCAGGCTTTTTATCTaGTCATGGAATGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQSRLFI*SWNAAG
Trigger: TCCAGCAGCATTCCATGAGCAGATAAAAAGCCTGGA...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp CAACACACGAATGGACCCCCGACTGCCATGATTTTCTGTTCATTAACAAGTGCTGAGACAAAGCATCACTaGTATCTTCATCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: QHTNGPPTAMIFCSLTSAETKHH*YLHQMR
Trigger: TCTCATTTGATGAAGATAGCAGTGATGCTTTGTCTC...AGCACTTGTTAATGAACAGAAAATCATGGCAGTCGGGGGTCCATTCGTGTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGGCTGGTTCTCTAAGCTaGCAGATAAACTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQAGSLS*QINCSQ
Trigger: CTGTGAACAGTTTATCTGCCAGCTTAGAGAACCAGC...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTTGTTTCTCCTTCTCCTaGAGTTTGCGGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSCFSFS*SLRSFS
Trigger: TGAGAAGGACCGCAAACTTCAGGAGAAGGAGAAACA...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGGCCATGTTTAGGATCTaGTGTATTAAAGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: AESSCWPETNFKQQIRLQAMFRI*CIKGMW
Trigger: CCACATCCCTTTAATACATCAGATCCTAAACATGGC...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR TCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTTCTCTCCACTCTTTATaGGGATGTCGAAGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSSLHSL*GCRRGR
Trigger: ACGACCTCTTCGACATCCTCATAAAGAGTGGAGAGA...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGAGACTGGTACAGCATaGTGGAATGACTCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSETGTA*WNDSAS
Trigger: ACTTGCTGAGTCATTCCAGCATGCTGTACCAGTCTC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATCACTGGTTTCATCTTaGAAATTGGAGAAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKSLVSS*KLEKAL
Trigger: AAGAGCCTTCTCCAATTTCCAAGATGAAACCAGTGA...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR GCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTCTTCGTGATTGGGGTTaGAAACAAAGAGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSLRDWG*KQRVLN
Trigger: GTTCAGCACTCTTTGTTTGCAACCCCAATCACGAAG...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTACGGTGTTTGTCGTTTaGATTCTTGGGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSTVFVV*ILGMAL
Trigger: CAAAGCCATCCCAAGAATCCAAACGACAAACACCGT...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CCA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTAGATGAACACAACAACTaGGAAGGTGACATCATAGTC +
Preference number: 4 (lower is better)
Translates to: THIKIQSASPMYSTSANVDEHNN*EGDIIV
Trigger: GACTATGATGTCACCTTCCCAGTTGTTGTGTTCATC...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
3UTR CAA 72 bp TTAAAAAGCAATAGAAGGGACTTGAGGGCTAGAATGTaGTCTTTACTCACAACTTTTCTACAGGAGGAAACA +
Preference number: 4 (lower is better)
Translates to: LKSNRRDLRARM*SLLTTFLQEET
Trigger: TGTTTCCTCCTGTAGAAAAGTTGTGAGTAAAGACAACATTCTAGCCCTCAAGTCCCTTCTATTGCTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
3UTR CAA 72 bp CATCTCTGTGGAAATTATAACCTTAGATGGAACCTTTaGGGGTCTGACTTGAGAACACAGTCTCAAAATTTA +
Preference number: 4 (lower is better)
Translates to: HLCGNYNLRWNL*GSDLRTQSQNL
Trigger: TAAATTTTGAGACTGTGTTCTCAAGTCAGACCCCAAAAGGTTCCATCTAAGGTTATAATTTCCACAGAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS CCA 90 bp GCAACAAGGGTCTGGCTACCCGTGGAGATGGGCTGGCCTACAGAGTaGCCAGGCACTGTGATGGGCTGCTGGGGGCTGGAGCAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: ATRVWLPVEMGWPTE*PGTVMGCWGLEQSG
Trigger: CCCTGACTGCTCCAGCCCCCAGCAGCCCATCACAGTGCCTGGCCACTCTGTAGGCCAGCCCATCTCCACGGGTAGCCAGACCCTTGTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 90 bp AGTCATCCAAGCTGGAGGGCAGCGGTCCTGGCCTCCTCGCCGGCATaGTGCTGCTACTGCCGCTGTTACTGCCGCTGCTGCTGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: SHPSWRAAVLASSPA*CCYCRCYCRCCCSC
Trigger: ACAAGAACAGCAGCAGCGGCAGTAACAGCGGCAGTAGCAGCAGCATGCCGGCGAGGAGGCCAGGACCGCTGCCCTCCAGCTTGGATGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS TCA 90 bp GCCAGGCACTGTGATGGGCTGCTGGGGGCTGGAGCAGTCAGGGAGTaGGGCCTCATCCTTGATGGAGGACCCAACACTGCCATGTTTAGG +
Preference number: 5 (lower is better)
Translates to: ARHCDGLLGAGAVRE*GLILDGGPNTAMFR
Trigger: CCTAAACATGGCAGTGTTGGGTCCTCCATCAAGGATGAGGCCTCACTCCCTGACTGCTCCAGCCCCCAGCAGCCCATCACAGTGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp ACAGTCTTTTTGGCAACAAGGGTCTGGCTACCCGTGGAGATGGGCTaGCCTACAGAGTGGCCAGGCACTGTGATGGGCTGCTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: TVFLATRVWLPVEMG*PTEWPGTVMGCWGL
Trigger: CAGCCCCCAGCAGCCCATCACAGTGCCTGGCCACTCTGTAGGCCAGCCCATCTCCACGGGTAGCCAGACCCTTGTTGCCAAAAAGACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCGTTCTGCTGCTCTGCTaGGGCCATGGGGACCTCTTG +
Preference number: 5 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLVLLLC*GHGDLL
Trigger: CAAGAGGTCCCCATGGCCCAAGCAGAGCAGCAGAAC...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp CAGCGGCAGGTCCTGTGGGTCCAGAAAATCAGCAGAGAACATGCTTaGCGCAGTGGTACTCAGTGGAGTGAGCCCGGAGGATGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: QRQVLWVQKISREHA*RSGTQWSEPGGCGG
Trigger: CCCACCACATCCTCCGGGCTCACTCCACTGAGTACCACTGCGCCAAGCATGTTCTCTGCTGATTTTCTGGACCCACAGGACCTGCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCATTCTTGGGATGGCTTaGCTTCACCAGCATTGGGCC +
Preference number: 5 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSILGMA*LHQHWA
Trigger: GGCCCAATGCTGGTGAAGCAAAGCCATCCCAAGAAT...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGAGCCTGGACTCTTCCTaGTGCTGGGGTCTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: AAGCPECSGASDLAIDLPSLDSS*CWGLEL
Trigger: CAACTCCAGACCCCAGCACAAGGAAGAGTCCAGGCT...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCCGAGAGACCACGGTATaGACTGGCATTGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSRETTV*TGIVVM
Trigger: CATCACCACAATGCCAGTCAATACCGTGGTCTCTCG...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp GGGACCTCTTGCTTGACGACCACAGTCTTTTTGGCAACAAGGGTCTaGCTACCCGTGGAGATGGGCTGGCCTACAGAGTGGCCAGGCACT +
Preference number: 5 (lower is better)
Translates to: GTSCLTTTVFLATRV*LPVEMGWPTEWPGT
Trigger: AGTGCCTGGCCACTCTGTAGGCCAGCCCATCTCCACGGGTAGCCAGACCCTTGTTGCCAAAAAGACTGTGGTCGTCAAGCAAGAGGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGATACAGGTGGTGCTATTaGGACCTGGGGCGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRYRWCY*DLGRWS
Trigger: CGACCACCGCCCCAGGTCCAAATAGCACCACCTGTA...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGCATGGGACCAGGCCTTaGAGCAATCTTCTCGTTCAG +
Preference number: 5 (lower is better)
Translates to: AAGCPECSGASDLAIDLPHGTRP*SNLLVQ
Trigger: CTGAACGAGAAGATTGCTCAAAGGCCTGGTCCCATG...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCCATGGGACCAGGCCTTaGAGCAATCTTCTCGTTCAG +
Preference number: 5 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLHGTRP*SNLLVQ
Trigger: CTGAACGAGAAGATTGCTCAAAGGCCTGGTCCCATG...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCTTGTCGTTTGGATTCTaGGGATGGCTTTGCTTCACC +
Preference number: 5 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSLSFGF*GWLCFT
Trigger: GGTGAAGCAAAGCCATCCCAAGAATCCAAACGACAA...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGACAGCAGAGAACATGCTaGGCGCAGTGGTACTCAGTG +
Preference number: 5 (lower is better)
Translates to: GPCPPECQASVERALFARQQRTC*AQWYSV
Trigger: CACTGAGTACCACTGCGCCAAGCATGTTCTCTGCTG...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp CCTAGAGCTGGCATTGCCACGGGGAGCACGCCTTCCCAGGTCCTCAGTTGCAGCAGCTGGAGCACTTCCTaGAGACTTTTCTGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: PRAGIATGSTPSQVLSCSSWSTS*RLFWLL
Trigger: AAGCAACCAGAAAAGTCTCAAGGAAGTGCTCCAGCT...GCTGCAACTGAGGACCTGGGAAGGCGTGCTCCCCGTGGCAATGCCAGCTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS TCA 90 bp AGACAACGTTCTGCTGCTCTGCTTGGGCCATGGGGACCTCTTGCTTaGCGACCACAGTCTTTTTGGCAACAAGGGTCTGGCTACCCGTGG +
Preference number: 5 (lower is better)
Translates to: RQRSAALLGPWGPLA*RPQSFWQQGSGYPW
Trigger: CCACGGGTAGCCAGACCCTTGTTGCCAAAAAGACTGTGGTCGTCAAGCAAGAGGTCCCCATGGCCCAAGCAGAGCAGCAGAACGTTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 90 bp TGCGAGACAACGTTCTGCTGCTCTGCTTGGGCCATGGGGACCTCTTaGTTGACGACCACAGTCTTTTTGGCAACAAGGGTCTGGCTACCC +
Preference number: 5 (lower is better)
Translates to: CETTFCCSAWAMGTS*LTTTVFLATRVWLP
Trigger: GGGTAGCCAGACCCTTGTTGCCAAAAAGACTGTGGTCGTCAAGCAAGAGGTCCCCATGGCCCAAGCAGAGCAGCAGAACGTTGTCTCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGAGCCACAGACTCACTTaGAGGACTTGGTGCAAGATG +
Preference number: 5 (lower is better)
Translates to: AAGCPECSGASDLAIDLPSHRLT*RTWCKM
Trigger: CATCTTGCACCAAGTCCTCAAAGTGAGTCTGTGGCT...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009713.14
CDS-3UTR CAA 90 bp CCACCACACTGTGGATGCTGCAGAAGAGGGAGACTGGGGTTGGACTCTACTGCGTTCTCTTGTCCTCCTTaGTTGCAGCCTCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PPHCGCCRRGRLGLDSTAFSCPP*LQPQLE
Trigger: CTCCAGCTGAGGCTGCAACAAAGGAGGACAAGAGAA...CGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACAATTCTTGGGATGGCTTaGCTTCACCAGCATTGGGCC +
Preference number: 5 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTILGMA*LHQHWA
Trigger: GGCCCAATGCTGGTGAAGCAAAGCCATCCCAAGAAT...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GCTGCTGGCTGCCCAGAGTGCTCAGGTGCCTCTGACCTTGCTATTGATCTGCCGATGGGGACCTCTTGCTaGACGACCACAGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: AAGCPECSGASDLAIDLPMGTSC*TTTVFL
Trigger: CAAAAAGACTGTGGTCGTCAAGCAAGAGGTCCCCAT...CGGCAGATCAATAGCAAGGTCAGAGGCACCTGAGCACTCTGGGCAGCCAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACAGTGCTACGTGCCTGCTaGATGGCTTCCTCATATCGA +
Preference number: 5 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTVLRAC*MASSYR
Trigger: TCGATATGAGGAAGCCATCAAGCAGGCACGTAGCAC...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACACGAGAGACCACGGTATaGACTGGCATTGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTRETTV*TGIVVM
Trigger: CATCACCACAATGCCAGTCAATACCGTGGTCTCTCG...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GGGGGTCAGTTCTGCCCTTCTACCACATGGGCTCTAGGGCTCAAGCTCAGCCTCTCCATGTTGTCCAGGTaGGAGTCTGACAGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: GGQFCPSTTWALGLKLSLSMLSR*ESDRSR
Trigger: TCTTGACCTGTCAGACTCCAACCTGGACAACATGGA...GAGGCTGAGCTTGAGCCCTAGAGCCCATGTGGTAGAAGGGCAGAACTGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp CCACCACACTGTGGATGCTGCAGAAGAGGGAGACTGGGGTTGGACTCTACTGCGTCTAGCCACTCCATGTaGTCCAGGTTGGAGTCTGAC +
Preference number: 5 (lower is better)
Translates to: PPHCGCCRRGRLGLDSTASSHSM*SRLESD
Trigger: GTCAGACTCCAACCTGGACAACATGGAGTGGCTAGA...CGCAGTAGAGTCCAACCCCAGTCTCCCTCTTCTGCAGCATCCACAGTGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS GCA 90 bp CACTGCTGTTCTGCAGTGGGCCAGTGTCAGTGGCCGAGGGCAAAGTaGCATCCAAGAAGGCTTCTAGCTGGTTCTCTAAGCTGGCAGATA +
Preference number: 5 (lower is better)
Translates to: HCCSAVGQCQWPRAK*HPRRLLAGSLSWQI
Trigger: TATCTGCCAGCTTAGAGAACCAGCTAGAAGCCTTCTTGGATGGCACTTTGCCCTCGGCCACTGACACTGGCCCACTGCAGAACAGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp CTGGTTCGTTGGGCCAGGCTGCCTCTGATACTGAAGAACTGTGTTTaGTGCCGAGTTTGTGAAGACCTTTCTGACTGGCTGAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LVRWARLPLILKNCV*CRVCEDLSDWLRLA
Trigger: GGCCAGCCTCAGCCAGTCAGAAAGGTCTTCACAAACTCGGCACCAAACACAGTTCTTCAGTATCAGAGGCAGCCTGGCCCAACGAACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGATTCTCTTGTCCTCCTTaGTTGCAGCCTCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRFSCPP*LQPQLE
Trigger: CTCCAGCTGAGGCTGCAACAAAGGAGGACAAGAGAA...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGAGGGCGGCTCCGGATCTaGTGCTTCAGAAAATTCTCA +
Preference number: 5 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRGRLRI*CFRKFS
Trigger: TGAGAATTTTCTGAAGCACAAGATCCGGAGCCGCCC...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TGTGAGGGAGTTGGCTGTGAAGCCACTGGCTGGAGGCCCCTTGCCTTCTTAAGAACCTCAAGCTGCATCTaGAGGACCTCCACAAGCTTC +
Preference number: 5 (lower is better)
Translates to: CEGVGCEATGWRPLAFLRTSSCI*RTSTSF
Trigger: GAAGCTTGTGGAGGTCCTCAAGATGCAGCTTGAGGT...TCTTAAGAAGGCAAGGGGCCTCCAGCCAGTGGCTTCACAGCCAACTCCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTAGCCTGGACTCTTCCTaGTGCTGGGGTCTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPSLDSS*CWGLEL
Trigger: CAACTCCAGACCCCAGCACAAGGAAGAGTCCAGGCT...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGATCCATGTTGTCCAGGTaGGAGTCTGACAGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: GPCPPECQASVERALFARSMLSR*ESDRSR
Trigger: TCTTGACCTGTCAGACTCCAACCTGGACAACATGGA...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 90 bp GGGCAGAGGAGAGTGGGCATTTTCAACATGGGGCACACTGCTGGTTaGAGGAAGTGCCAAGTCTGCCTTGAAAGTGGACACAGAGCTTGT +
Preference number: 5 (lower is better)
Translates to: GQRRVGIFNMGHTAG*RKCQVCLESGHRAC
Trigger: ACAAGCTCTGTGTCCACTTTCAAGGCAGACTTGGCACTTCCTGCAACCAGCAGTGTGCCCCATGTTGAAAATGCCCACTCTCCTCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 90 bp CGTTCTGCAGATCCTCGATCAGAGAGAAAGACTCTCTATCTTCACTaGTGTTCTGCAGTGGGCCAGTGTCAGTGGCCGAGGGCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: RSADPRSERKTLYLH*CSAVGQCQWPRAKC
Trigger: GCACTTTGCCCTCGGCCACTGACACTGGCCCACTGCAGAACAGCAGTGAAGATAGAGAGTCTTTCTCTCTGATCGAGGATCTGCAGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 90 bp ACTGGGCCTCAGAGGTCTCCATGGGAGAGTGAGACTGGTACAGCATaGTGGAATGACTCAGCAAGTCGTTCTGCAGATCCTCGATCAGAG +
Preference number: 5 (lower is better)
Translates to: TGPQRSPWESETGTA*WNDSASRSADPRSE
Trigger: CTCTGATCGAGGATCTGCAGAACGACTTGCTGAGTCATTCCAGCATGCTGTACCAGTCTCACTCTCCCATGGAGACCTCTGAGGCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp CTGAAGAACTGTGTTTGGTGCCGAGTTTGTGAAGACCTTTCTGACTaGCTGAGGCTGGCCCAACACGTGCTGTGGGAAGGCTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LKNCVWCRVCEDLSD*LRLAQHVLWEGFLL
Trigger: AAGCAGGAAGCCTTCCCACAGCACGTGTTGGGCCAGCCTCAGCCAGTCAGAAAGGTCTTCACAAACTCGGCACCAAACACAGTTCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp AGCTGCACAGTCAGCAAGCAGCACAGTTGCCCTGTCAGGAGGAGGCGTCTATTCAGCCACAGACTCACTTaGAGGACTTGGTGCAAGATG +
Preference number: 5 (lower is better)
Translates to: SCTVSKQHSCPVRRRRLFSHRLT*RTWCKM
Trigger: CATCTTGCACCAAGTCCTCAAAGTGAGTCTGTGGCT...GAATAGACGCCTCCTCCTGACAGGGCAACTGTGCTGCTTGCTGACTGTGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR CAA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACTGGGGCAGTTCTGGATaGAAGAGCAGGGTTAGAGGT +
Preference number: 5 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDWGSSG*KSRVRG
Trigger: ACCTCTAACCCTGCTCTTCAATCCAGAACTGCCCCA...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGATTGAGACTTTTCTGGTaGCTTCCCTCAAGGCATTCC +
Preference number: 5 (lower is better)
Translates to: GPCPPECQASVERALFARLRLFW*LPSRHS
Trigger: GGAATGCCTTGAGGGAAGCAACCAGAAAAGTCTCAA...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS TCA 90 bp ATTCTTGGGATGGCTTTGCTTCACCAGCATTGGGCCAGACTTCGCTaGGGACACAGTGTTTGTAGGGAGCACGGGAGCTGTAGACCTTGT +
Preference number: 5 (lower is better)
Translates to: ILGMALLHQHWARLR*GHSVCREHGSCRPC
Trigger: ACAAGGTCTACAGCTCCCGTGCTCCCTACAAACACTGTGTCCTCAGCGAAGTCTGGCCCAATGCTGGTGAAGCAAAGCCATCCCAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS TCA 90 bp GGCCTCATCCTTGATGGAGGACCCAACACTGCCATGTTTAGGATCTaGTGTATTAAAGGGATGTGGGGGATCACTGGGCTGAGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GLILDGGPNTAMFRI*CIKGMWGITGLRVW
Trigger: CCAGACCCTCAGCCCAGTGATCCCCCACATCCCTTTAATACATCAGATCCTAAACATGGCAGTGTTGGGTCCTCCATCAAGGATGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 90 bp TGCATCCTGACAAGCTCAGAGCGGTCTGGGCGGCTCCGGATCTTGTaGTTCAGAAAATTCTCAGTTCTGGCTCGCTCCAGGCTTTTTATC +
Preference number: 5 (lower is better)
Translates to: CILTSSERSGRLRIL*FRKFSVLARSRLFI
Trigger: GATAAAAAGCCTGGAGCGAGCCAGAACTGAGAATTTTCTGAAGCACAAGATCCGGAGCCGCCCAGACCGCTCTGAGCTTGTCAGGATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 90 bp TCCCTGGGAACTAAGGTAGAACTGCGAGACAACGTTCTGCTGCTCTaGTTGGGCCATGGGGACCTCTTGCTTGACGACCACAGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: SLGTKVELRDNVLLL*LGHGDLLLDDHSLF
Trigger: AAAAAGACTGTGGTCGTCAAGCAAGAGGTCCCCATGGCCCAAGCAGAGCAGCAGAACGTTGTCTCGCAGTTCTACCTTAGTTCCCAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 90 bp TGCACACTGGAAACCTCTGGAAGGGCTGGCTGTGTGCTACGTGCCTaGTTGATGGCTTCCTCATATCGAGGTGGATCTTTTGTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: CTLETSGRAGCVLRA*LMASSYRGGSFVFV
Trigger: CACGAAGACAAAAGATCCACCTCGATATGAGGAAGCCATCAAGCAGGCACGTAGCACACAGCCAGCCCTTCCAGAGGTTTCCAGTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 90 bp AGATCCTCGATCAGAGAGAAAGACTCTCTATCTTCACTGCTGTTCTaGAGTGGGCCAGTGTCAGTGGCCGAGGGCAAAGTGCCATCCAAG +
Preference number: 5 (lower is better)
Translates to: RSSIREKDSLSSLLF*SGPVSVAEGKVPSK
Trigger: CTTGGATGGCACTTTGCCCTCGGCCACTGACACTGGCCCACTGCAGAACAGCAGTGAAGATAGAGAGTCTTTCTCTCTGATCGAGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp GGTCTGGGCGGCTCCGGATCTTGTGCTTCAGAAAATTCTCAGTTCTaGCTCGCTCCAGGCTTTTTATCTGCTCATGGAATGCTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: GLGGSGSCASENSQF*LAPGFLSAHGMLLD
Trigger: GTCCAGCAGCATTCCATGAGCAGATAAAAAGCCTGGAGCGAGCCAGAACTGAGAATTTTCTGAAGCACAAGATCCGGAGCCGCCCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp ACAGTGTTTGTAGGGAGCACGGGAGCTGTAGACCTTGTGGGAGGCTaGTCTGCAGTTAGAGGGGTTTTCAAGAATTCAGGAACTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TVFVGSTGAVDLVGG*SAVRGVFKNSGTAG
Trigger: CCCAGCAGTTCCTGAATTCTTGAAAACCCCTCTAACTGCAGACCAGCCTCCCACAAGGTCTACAGCTCCCGTGCTCCCTACAAACACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp AAGAGCAGGGTTAGAGGTCTTACTGACAAAGGGCTGCTGGTTCGTTaGGCCAGGCTGCCTCTGATACTGAAGAACTGTGTTTGGTGCCGA +
Preference number: 5 (lower is better)
Translates to: KSRVRGLTDKGLLVR*ARLPLILKNCVWCR
Trigger: TCGGCACCAAACACAGTTCTTCAGTATCAGAGGCAGCCTGGCCCAACGAACCAGCAGCCCTTTGTCAGTAAGACCTCTAACCCTGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp AAGACTCTCTATCTTCACTGCTGTTCTGCAGTGGGCCAGTGTCAGTaGCCGAGGGCAAAGTGCCATCCAAGAAGGCTTCTAGCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: KTLYLHCCSAVGQCQ*PRAKCHPRRLLAGS
Trigger: AGAACCAGCTAGAAGCCTTCTTGGATGGCACTTTGCCCTCGGCCACTGACACTGGCCCACTGCAGAACAGCAGTGAAGATAGAGAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACATACGGTGTTTGTCGTTaGGATTCTTGGGATGGCTTT +
Preference number: 5 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTYGVCR*DSWDGF
Trigger: AAAGCCATCCCAAGAATCCAAACGACAAACACCGTA...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 90 bp GGCATGATGCCCTGGTCCACTAGTTGTTCTCTTGTCCTCCTTTGTTaGAGCCTCAGCTGGAGCACATTTTTCCGTTCGTTCAGAGTGGGT +
Preference number: 5 (lower is better)
Translates to: GMMPWSTSCSLVLLC*SLSWSTFFRSFRVG
Trigger: ACCCACTCTGAACGAACGGAAAAATGTGCTCCAGCTGAGGCTGCAACAAAGGAGGACAAGAGAACAACTAGTGGACCAGGGCATCATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009713.14
CDS CCA 90 bp GCTGGAGCACATTTTTCCGTTCGTTCAGAGTGGGTAAGTGCTGGCTaGACTGTAGAGACAGTTCCTGGAATTCGTGAGCCACAGACTCAC +
Preference number: 5 (lower is better)
Translates to: AGAHFSVRSEWVSAG*TVETVPGIREPQTH
Trigger: GTGAGTCTGTGGCTCACGAATTCCAGGAACTGTCTCTACAGTCCAGCCAGCACTTACCCACTCTGAACGAACGGAAAAATGTGCTCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009713.14
CDS CCA 90 bp AAACTGTTCACAGGTTCTAAGGATACAGGTGGTGCTATTTGGACCTaGGGCGGTGGTCGAGAGACCACGGTATTGACTGGCATTGTGGTG +
Preference number: 5 (lower is better)
Translates to: KLFTGSKDTGGAIWT*GGGRETTVLTGIVV
Trigger: CACCACAATGCCAGTCAATACCGTGGTCTCTCGACCACCGCCCCAGGTCCAAATAGCACCACCTGTATCCTTAGAACCTGTGAACAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GGGCCCTGCCCACCAGAATGCCAAGCTTCAGTTGAGAGAGCGCTGTTTGCCAGATTTTTGCTACGGTGTTaGTCGTTTGGATTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: GPCPPECQASVERALFARFLLRC*SFGFLG
Trigger: TCCCAAGAATCCAAACGACAAACACCGTAGCAAAAA...TCTGGCAAACAGCGCTCTCTCAACTGAAGCTTGGCATTCTGGTGGGCAGGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTACGACCACAGTCTTTTaGGCAACAAGGGTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPTTTVF*ATRVWL
Trigger: TAGCCAGACCCTTGTTGCCAAAAAGACTGTGGTCGT...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTAATTTCTGGGAAGCCTaGTGGCTGCTTCTTGGAGCT +
Preference number: 5 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPNFWEA*WLLLGA
Trigger: AGCTCCAAGAAGCAGCCACAAGGCTTCCCAGAAATT...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS TCA 90 bp CCTGAAGAGATGGCTCTGCAAACGTTTCTTCTAAAATATGCATCCTaGCAAGCTCAGAGCGGTCTGGGCGGCTCCGGATCTTGTGCTTCA +
Preference number: 5 (lower is better)
Translates to: PEEMALQTFLLKYAS*QAQSGLGGSGSCAS
Trigger: TGAAGCACAAGATCCGGAGCCGCCCAGACCGCTCTGAGCTTGTCAGGATGCATATTTTAGAAGAAACGTTTGCAGAGCCATCTCTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS TCA 90 bp CGCTGGCTGGTCTGGAGACAAAGCATCACTGCTATCTTCATCAAATaGGAACTCGCCATGAGTGTGAGGATAGTCCTCCTTCACCACACC +
Preference number: 5 (lower is better)
Translates to: RWLVWRQSITAIFIK*ELAMSVRIVLLHHT
Trigger: GGTGTGGTGAAGGAGGACTATCCTCACACTCATGGCGAGTTCTCATTTGATGAAGATAGCAGTGATGCTTTGTCTCCAGACCAGCCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS TCA 90 bp ATGTCCTGTGCTCACAGACTGAGCCGGCAGAGGAAGCTGCAGTCCTaGCTCCCCAAAGACTATACTTCCATTTTTCCGTTCGTTCAGAGT +
Preference number: 5 (lower is better)
Translates to: MSCAHRLSRQRKLQS*LPKDYTSIFPFVQS
Trigger: ACTCTGAACGAACGGAAAAATGGAAGTATAGTCTTTGGGGAGTCAGGACTGCAGCTTCCTCTGCCGGCTCAGTCTGTGAGCACAGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS CCA 90 bp GCAGATAAACTGTTCACAGGTTCTAAGGATACAGGTGGTGCTATTTaGACCTGGGGCGGTGGTCGAGAGACCACGGTATTGACTGGCATT +
Preference number: 5 (lower is better)
Translates to: ADKLFTGSKDTGGAI*TWGGGRETTVLTGI
Trigger: AATGCCAGTCAATACCGTGGTCTCTCGACCACCGCCCCAGGTCCAAATAGCACCACCTGTATCCTTAGAACCTGTGAACAGTTTATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTTTGTCGTTTGGATTCTaGGGATGGCTTTGCTTCACC +
Preference number: 5 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPLSFGF*GWLCFT
Trigger: GGTGAAGCAAAGCCATCCCAAGAATCCAAACGACAA...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TCCCAGGTCCTCAGTTGCAGCAGAGCCAACCTCAGGAGGCCTGGTCAGATGACAGGATCTTTGCATTTTTaGCTACGGTGTTTGTCGTTT +
Preference number: 5 (lower is better)
Translates to: SQVLSCSRANLRRPGQMTGSLHF*LRCLSF
Trigger: AAACGACAAACACCGTAGCAAAAAATGCAAAGATCC...TGTCATCTGACCAGGCCTCCTGAGGTTGGCTCTGCTGCAACTGAGGACCTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp CAGACAGCACCTCGTGGATCTGAGATTGCCAAGCTGCTGTCACAAGCTTGGGACGTCACTGGTTTCATCTaGGAAATTGGAGAAGGCTCT +
Preference number: 5 (lower is better)
Translates to: QTAPRGSEIAKLLSQAWDVTGFI*EIGEGS
Trigger: AGAGCCTTCTCCAATTTCCAAGATGAAACCAGTGAC...GTCCCAAGCTTGTGACAGCAGCTTGGCAATCTCAGATCCACGAGGTGCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS GCA 90 bp AGAGTGGGCATTTTCAACATGGGGCACACTGCTGGTTGCAGGAAGTaGCAAGTCTGCCTTGAAAGTGGACACAGAGCTTGTTACAGCATT +
Preference number: 5 (lower is better)
Translates to: RVGIFNMGHTAGCRK*QVCLESGHRACYSI
Trigger: AATGCTGTAACAAGCTCTGTGTCCACTTTCAAGGCAGACTTGGCACTTCCTGCAACCAGCAGTGTGCCCCATGTTGAAAATGCCCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp GAAAGTGGACACAGAGCTTGTTACAGCATTATGCAGTGTTGTGACTaGCAGTGCCACTGTGACCTCTGGGTTACTGGTGACAATGGTTGC +
Preference number: 5 (lower is better)
Translates to: ESGHRACYSIMQCCD*QCHCDLWVTGDNGC
Trigger: GCAACCATTGTCACCAGTAACCCAGAGGTCACAGTGGCACTGCCAGTCACAACACTGCATAATGCTGTAACAAGCTCTGTGTCCACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp GTGTCAGTGGCCGAGGGCAAAGTGCCATCCAAGAAGGCTTCTAGCTaGTTCTCTAAGCTGGCAGATAAACTGTTCACAGGTTCTAAGGAT +
Preference number: 5 (lower is better)
Translates to: VSVAEGKVPSKKASS*FSKLADKLFTGSKD
Trigger: ATCCTTAGAACCTGTGAACAGTTTATCTGCCAGCTTAGAGAACCAGCTAGAAGCCTTCTTGGATGGCACTTTGCCCTCGGCCACTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCACTCACTTTGAGGACTaGGTGCAAGATGGGCTAGAG +
Preference number: 5 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRTHFED*VQDGLE
Trigger: CTCTAGCCCATCTTGCACCAAGTCCTCAAAGTGAGT...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009713.14
CDS-3UTR CAA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGGGGCACACTGCTGGTaGCAGGAAGTGCCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKGAHCW*QEVPSL
Trigger: CAGACTTGGCACTTCCTGCAACCAGCAGTGTGCCCC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTCACAAGCTTCTGTTCTaGTTCCAGTTTCCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPHKLLF*FQFPLQ
Trigger: CTGAAGAGGAAACTGGAACAAGAACAGAAGCTTGTG...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAAGTTCTGCTGCTCTGCTaGGGCCATGGGGACCTCTTG +
Preference number: 5 (lower is better)
Translates to: TVEVTRSKHIPMSNITGEVLLLC*GHGDLL
Trigger: CAAGAGGTCCCCATGGCCCAAGCAGAGCAGCAGAAC...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAATACAGGTGGTGCTATTaGGACCTGGGGCGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: TVEVTRSKHIPMSNITGEYRWCY*DLGRWS
Trigger: CGACCACCGCCCCAGGTCCAAATAGCACCACCTGTA...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 90 bp TGCTTCAGAAAATTCTCAGTTCTGGCTCGCTCCAGGCTTTTTATCTaGTCATGGAATGCTGCTGGACTCTTCAAAGGTGGCATGATGCCC +
Preference number: 5 (lower is better)
Translates to: CFRKFSVLARSRLFI*SWNAAGLFKGGMMP
Trigger: GGGCATCATGCCACCTTTGAAGAGTCCAGCAGCATTCCATGAGCAGATAAAAAGCCTGGAGCGAGCCAGAACTGAGAATTTTCTGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp CTATACTTCCATTTTTCCGTTCGTTCAGAGTGGGTAAGTGCTGGCTaGACTGTAGAGACAGTTCCTGGAATTCGTGAGCCACAGACTCAC +
Preference number: 5 (lower is better)
Translates to: LYFHFSVRSEWVSAG*TVETVPGIREPQTH
Trigger: GTGAGTCTGTGGCTCACGAATTCCAGGAACTGTCTCTACAGTCCAGCCAGCACTTACCCACTCTGAACGAACGGAAAAATGGAAGTATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR CAA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAAAGTGCCAAGTCTGCCTaGAAAGTGGACACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQSAKSA*KVDTEL
Trigger: AAGCTCTGTGTCCACTTTCAAGGCAGACTTGGCACT...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp CTTGATGGCTTCCTCATATCGAGGTGGATCTTTTGTCTTCGTGATTaGGGTTGCAAACAAAGAGTGCTGAACAACAAACTGCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: LDGFLISRWIFCLRD*GCKQRVLNNKLLGW
Trigger: CCACCCCAGCAGTTTGTTGTTCAGCACTCTTTGTTTGCAACCCCAATCACGAAGACAAAAGATCCACCTCGATATGAGGAAGCCATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 90 bp AGGGCAAAGTGCCATCCAAGAAGGCTTCTAGCTGGTTCTCTAAGCTaGCAGATAAACTGTTCACAGGTTCTAAGGATACAGGTGGTGCTA +
Preference number: 5 (lower is better)
Translates to: RAKCHPRRLLAGSLS*QINCSQVLRIQVVL
Trigger: TAGCACCACCTGTATCCTTAGAACCTGTGAACAGTTTATCTGCCAGCTTAGAGAACCAGCTAGAAGCCTTCTTGGATGGCACTTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCTACGGTGTTTGTCGTTaGGATTCTTGGGATGGCTTT +
Preference number: 5 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRYGVCR*DSWDGF
Trigger: AAAGCCATCCCAAGAATCCAAACGACAAACACCGTA...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAAGTGAGGCCTCATCCTaGATGGAGGACCCAACACTG +
Preference number: 5 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKSEASS*MEDPTL
Trigger: CAGTGTTGGGTCCTCCATCAAGGATGAGGCCTCACT...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GGAAAGATGCCCACATTTGTCCAGAACATGTGCGAGAGGTCTATCAAGTGTCGCGTCACTGGTTTCATCTaGGAAATTGGAGAAGGCTCT +
Preference number: 5 (lower is better)
Translates to: GKMPTFVQNMCERSIKCRVTGFI*EIGEGS
Trigger: AGAGCCTTCTCCAATTTCCAAGATGAAACCAGTGAC...GCGACACTTGATAGACCTCTCGCACATGTTCTGGACAAATGTGGGCATCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp CAGGAGGAGGCGTCTATTCCAGGTAGTGTTCTAATTTTGTTGCTATCAACTTCCACTCACTTTGAGGACTaGGTGCAAGATGGGCTAGAG +
Preference number: 5 (lower is better)
Translates to: QEEASIPGSVLILLLSTSTHFED*VQDGLE
Trigger: CTCTAGCCCATCTTGCACCAAGTCCTCAAAGTGAGT...GGAAGTTGATAGCAACAAAATTAGAACACTACCTGGAATAGACGCCTCCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR CAA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAAGGGCGGCTCCGGATCTaGTGCTTCAGAAAATTCTCA +
Preference number: 5 (lower is better)
Translates to: TVEVTRSKHIPMSNITGEGRLRI*CFRKFS
Trigger: TGAGAATTTTCTGAAGCACAAGATCCGGAGCCGCCC...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGGCAGACCCCTCAGTTaGAGTTCTGTCTTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKGRPLS*SSVFSS
Trigger: AGAGCTGAAGACAGAACTCAAACTGAGGGGTCTGCC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAAAAGTGGACACAGAGCTaGTTACAGCATTATGCAGTG +
Preference number: 5 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQKWTQS*LQHYAV
Trigger: CACTGCATAATGCTGTAACAAGCTCTGTGTCCACTT...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGGGGCACACTGCTGGTaGCAGGAAGTGCCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSGAHCW*QEVPSL
Trigger: CAGACTTGGCACTTCCTGCAACCAGCAGTGTGCCCC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAAACCTCAAGCTGCATCTaGAGGACCTCCACAAGCTTC +
Preference number: 5 (lower is better)
Translates to: TVEVTRSKHIPMSNITGETSSCI*RTSTSF
Trigger: GAAGCTTGTGGAGGTCCTCAAGATGCAGCTTGAGGT...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp CAAGTCTTCAAAGATGGAGACACTGTGTGGCTCAGTACTCTAGAGATATCTGACATGGGGACCTCTTGCTaGACGACCACAGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: QVFKDGDTVWLSTLEISDMGTSC*TTTVFL
Trigger: CAAAAAGACTGTGGTCGTCAAGCAAGAGGTCCCCAT...GTCAGATATCTCTAGAGTACTGAGCCACACAGTGTCTCCATCTTTGAAGACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATGGGGCAGTTCTGGATaGAAGAGCAGGGTTAGAGGT +
Preference number: 5 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKWGSSG*KSRVRG
Trigger: ACCTCTAACCCTGCTCTTCAATCCAGAACTGCCCCA...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTGTTTCATCTTGGAAATaGGAGAAGGCTCTTCTTTTA +
Preference number: 5 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPVSSWK*EKALLL
Trigger: TAAAAGAAGAGCCTTCTCCAATTTCCAAGATGAAAC...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TGCATACAACTGTCTCTGTGGAGTCTCTCACACTTGGCTTCCAGGCTGTGGCCTAGGCATTCCTTTTCTTaGAAAGGTTCAAAATCCTCA +
Preference number: 5 (lower is better)
Translates to: CIQLSLWSLSHLASRLWPRHSFS*KGSKSS
Trigger: TGAGGATTTTGAACCTTTCAAAGAAAAGGAATGCCT...AGGCCACAGCCTGGAAGCCAAGTGTGAGAGACTCCACAGAGACAGTTGTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GAGGCGTCTATTCCAGGTAGTGTTCTAATTTTGTTGCTATCAACTTCCCAGTCTACTCACTTTGAGGACTaGGTGCAAGATGGGCTAGAG +
Preference number: 5 (lower is better)
Translates to: EASIPGSVLILLLSTSQSTHFED*VQDGLE
Trigger: CTCTAGCCCATCTTGCACCAAGTCCTCAAAGTGAGT...AGACTGGGAAGTTGATAGCAACAAAATTAGAACACTACCTGGAATAGACGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS-3UTR CAA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAAGTGCCAAGTCTGCCTaGAAAGTGGACACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKSAKSA*KVDTEL
Trigger: AAGCTCTGTGTCCACTTTCAAGGCAGACTTGGCACT...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGTCTAGCCACTCCATGTaGTCCAGGTTGGAGTCTGAC +
Preference number: 5 (lower is better)
Translates to: AESSCWPETNFKQQIRLQSSHSM*SRLESD
Trigger: GTCAGACTCCAACCTGGACAACATGGAGTGGCTAGA...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTAGTGAGGCCTCATCCTaGATGGAGGACCCAACACTG +
Preference number: 5 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSSEASS*MEDPTL
Trigger: CAGTGTTGGGTCCTCCATCAAGGATGAGGCCTCACT...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGACGACCACAGTCTTTTaGGCAACAAGGGTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: AESSCWPETNFKQQIRLQTTTVF*ATRVWL
Trigger: TAGCCAGACCCTTGTTGCCAAAAAGACTGTGGTCGT...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTACAGCAGAGAACATGCTaGGCGCAGTGGTACTCAGTG +
Preference number: 5 (lower is better)
Translates to: THIKIQSASPMYSTSANVQQRTC*AQWYSV
Trigger: CACTGAGTACCACTGCGCCAAGCATGTTCTCTGCTG...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp ACACATATAAAAATACAGTCTGCATCGCCTATGTACAGTACAAGTGCAAACGTAGGCAGACCCCTCAGTTaGAGTTCTGTCTTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: THIKIQSASPMYSTSANVGRPLS*SSVFSS
Trigger: AGAGCTGAAGACAGAACTCAAACTGAGGGGTCTGCC...TACGTTTGCACTTGTACTGTACATAGGCGATGCAGACTGTATTTTTATATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTGTGCTACGTGCCTGCTaGATGGCTTCCTCATATCGA +
Preference number: 5 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSVLRAC*MASSYR
Trigger: TCGATATGAGGAAGCCATCAAGCAGGCACGTAGCAC...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TCTTCAGATACACACCATTTCCAATGCACTCACTGCGGTCTGGGACTAGGTCAAGTTTCATCTTGGAAATaGGAGAAGGCTCTTCTTTTA +
Preference number: 5 (lower is better)
Translates to: SSDTHHFQCTHCGLGLGQVSSWK*EKALLL
Trigger: TAAAAGAAGAGCCTTCTCCAATTTCCAAGATGAAAC...TTGACCTAGTCCCAGACCGCAGTGAGTGCATTGGAAATGGTGTGTATCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp ACTGTAGAGGTCACAAGGTCAAAGCACATTCCAATGTCTAACATCACAGGAGAATTTTTGCTACGGTGTTaGTCGTTTGGATTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: TVEVTRSKHIPMSNITGEFLLRC*SFGFLG
Trigger: TCCCAAGAATCCAAACGACAAACACCGTAGCAAAAA...TTCTCCTGTGATGTTAGACATTGGAATGTGCTTTGACCTTGTGACCTCTACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp GCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAATTCGTCTTCAGAAGTGGACACAGAGCTaGTTACAGCATTATGCAGTG +
Preference number: 5 (lower is better)
Translates to: AESSCWPETNFKQQIRLQKWTQS*LQHYAV
Trigger: CACTGCATAATGCTGTAACAAGCTCTGTGTCCACTT...CTGAAGACGAATTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAAAGGCTCTTCTTTTATaGGGAAGGAAATCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKKALLL*GRKSLH
Trigger: GTGGAGAGATTTCCTTCCCAATAAAAGAAGAGCCTT...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp AGGCCTGATCTGCTGAGTCATCTTGCTGGCCTGAAACTAACTTTAAACAACAAAGGATCTTTGCATTTTTaGCTACGGTGTTTGTCGTTT +
Preference number: 5 (lower is better)
Translates to: RPDLLSHLAGLKLTLNNKGSLHF*LRCLSF
Trigger: AAACGACAAACACCGTAGCAAAAAATGCAAAGATCC...TTTGTTGTTTAAAGTTAGTTTCAGGCCAGCAAGATGACTCAGCAGATCAGGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS-3UTR CAA 90 bp TCCCAAATTCACAAAATGACCTATGACATCACACAATCACGCAGATTTCAAAGTAAGGCTCTTCTTTTATaGGGAAGGAAATCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: SQIHKMTYDITQSRRFQSKALLL*GRKSLH
Trigger: GTGGAGAGATTTCCTTCCCAATAAAAGAAGAGCCTT...ACTTTGAAATCTGCGTGATTGTGTGATGTCATAGGTCATTTTGTGAATTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp GCGGTCCTGGCCTCCTCGCCGGCATGCTGCTGCTACTaGCGCTGTTACTGCCGCTGCTGCTGTTCTTGTCAG +
Preference number: 6 (lower is better)
Translates to: AVLASSPACCCY*RCYCRCCCSCQ
Trigger: CTGACAAGAACAGCAGCAGCGGCAGTAACAGCGGCAGTAGCAGCAGCATGCCGGCGAGGAGGCCAGGACCGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp TTGGCAACAAGGGTCTGGCTACCCGTGGAGATGGGCTaGCCTACAGAGTGGCCAGGCACTGTGATGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LATRVWLPVEMG*PTEWPGTVMGC
Trigger: GCAGCCCATCACAGTGCCTGGCCACTCTGTAGGCCAGCCCATCTCCACGGGTAGCCAGACCCTTGTTGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp AAAGGGATGTGGGGGATCACTGGGCTGAGGGTCTGGTaGTCGCTGCTGCCCACGTTTTTCCACCTCAAGCTG +
Preference number: 6 (lower is better)
Translates to: KGMWGITGLRVW*SLLPTFFHLKL
Trigger: CAGCTTGAGGTGGAAAAACGTGGGCAGCAGCGACCACCAGACCCTCAGCCCAGTGATCCCCCACATCCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp CCACAGTCTTTTTGGCAACAAGGGTCTGGCTACCCGTaGAGATGGGCTGGCCTACAGAGTGGCCAGGCACTG +
Preference number: 6 (lower is better)
Translates to: PQSFWQQGSGYP*RWAGLQSGQAL
Trigger: CAGTGCCTGGCCACTCTGTAGGCCAGCCCATCTCCACGGGTAGCCAGACCCTTGTTGCCAAAAAGACTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 90 bp TCTGCTTGGGCCATGGGGACCTCTTGCTTGACGACCACAGTCTTTTaGGCAACAAGGGTCTGGCTACCCGTGGAGATGGGCTGGCCTACA +
Preference number: 6 (lower is better)
Translates to: SAWAMGTSCLTTTVF*ATRVWLPVEMGWPT
Trigger: TGTAGGCCAGCCCATCTCCACGGGTAGCCAGACCCTTGTTGCCAAAAAGACTGTGGTCGTCAAGCAAGAGGTCCCCATGGCCCAAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 90 bp AACCTGTGTGGCAGCAGCTACATGAGGCTGAGCCTGGACTCTTCCTaGTGCTGGGGTCTGGAGTTGAAGGCTGCCTACTGGGAGTTGCAC +
Preference number: 6 (lower is better)
Translates to: NLCGSSYMRLSLDSS*CWGLELKAAYWELH
Trigger: GTGCAACTCCCAGTAGGCAGCCTTCAACTCCAGACCCCAGCACAAGGAAGAGTCCAGGCTCAGCCTCATGTAGCTGCTGCCACACAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp AGCAGCTACATGAGGCTGAGCCTGGACTCTTCCTTGTaGTGGGGTCTGGAGTTGAAGGCTGCCTACTGGGAG +
Preference number: 6 (lower is better)
Translates to: SSYMRLSLDSSL*WGLELKAAYWE
Trigger: CTCCCAGTAGGCAGCCTTCAACTCCAGACCCCAGCACAAGGAAGAGTCCAGGCTCAGCCTCATGTAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp GGATGGACACTGGCAGCAGCAGCTGAGTTGTCTGTGTaGTCAGTAAGGCCTGAGGCTGAGCAACAAGGGCAG +
Preference number: 6 (lower is better)
Translates to: GWTLAAAAELSV*SVRPEAEQQGQ
Trigger: CTGCCCTTGTTGCTCAGCCTCAGGCCTTACTGACCACACAGACAACTCAGCTGCTGCTGCCAGTGTCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp CTGCTGACTGTGCACACTGGAAACCTCTGGAAGGGCTaGCTGTGTGCTACGTGCCTGCTTGATGGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LLTVHTGNLWKG*LCATCLLDGFL
Trigger: GAGGAAGCCATCAAGCAGGCACGTAGCACACAGCCAGCCCTTCCAGAGGTTTCCAGTGTGCACAGTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 72 bp GCCATGGGGACCTCTTGCTTGACGACCACAGTCTTTTaGGCAACAAGGGTCTGGCTACCCGTGGAGATGGGC +
Preference number: 6 (lower is better)
Translates to: AMGTSCLTTTVF*ATRVWLPVEMG
Trigger: GCCCATCTCCACGGGTAGCCAGACCCTTGTTGCCAAAAAGACTGTGGTCGTCAAGCAAGAGGTCCCCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 90 bp GAGACAACGTTCTGCTGCTCTGCTTGGGCCATGGGGACCTCTTGCTaGACGACCACAGTCTTTTTGGCAACAAGGGTCTGGCTACCCGTG +
Preference number: 6 (lower is better)
Translates to: ETTFCCSAWAMGTSC*TTTVFLATRVWLPV
Trigger: CACGGGTAGCCAGACCCTTGTTGCCAAAAAGACTGTGGTCGTCAAGCAAGAGGTCCCCATGGCCCAAGCAGAGCAGCAGAACGTTGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 90 bp CTGCGAGACAACGTTCTGCTGCTCTGCTTGGGCCATGGGGACCTCTaGCTTGACGACCACAGTCTTTTTGGCAACAAGGGTCTGGCTACC +
Preference number: 6 (lower is better)
Translates to: LRDNVLLLCLGHGDL*LDDHSLFGNKGLAT
Trigger: GGTAGCCAGACCCTTGTTGCCAAAAAGACTGTGGTCGTCAAGCAAGAGGTCCCCATGGCCCAAGCAGAGCAGCAGAACGTTGTCTCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS TCA 72 bp TTTGGTGCCGAGTTTGTGAAGACCTTTCTGACTGGCTaGGGCTGGCCCAACACGTGCTGTGGGAAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: FGAEFVKTFLTG*GWPNTCCGKAS
Trigger: GGAAGCCTTCCCACAGCACGTGTTGGGCCAGCCTCAGCCAGTCAGAAAGGTCTTCACAAACTCGGCACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp TCTGCAGTGGGCCAGTGTCAGTGGCCGAGGGCAAAGTaGCATCCAAGAAGGCTTCTAGCTGGTTCTCTAAGC +
Preference number: 6 (lower is better)
Translates to: SAVGQCQWPRAK*HPRRLLAGSLS
Trigger: GCTTAGAGAACCAGCTAGAAGCCTTCTTGGATGGCACTTTGCCCTCGGCCACTGACACTGGCCCACTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp GACAGGGTGCTACTGGAAGGGCTCAGGCTGTCATCATaGCTCACCACCCTCAGGGGAGATGAACACAACAAC +
Preference number: 6 (lower is better)
Translates to: DRVLLEGLRLSS*LTTLRGDEHNN
Trigger: GTTGTTGTGTTCATCTCCCCTGAGGGTGGTGAGCCATGATGACAGCCTGAGCCCTTCCAGTAGCACCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp TGCTTGACGACCACAGTCTTTTTGGCAACAAGGGTCTaGCTACCCGTGGAGATGGGCTGGCCTACAGAGTGG +
Preference number: 6 (lower is better)
Translates to: CLTTTVFLATRV*LPVEMGWPTEW
Trigger: CCACTCTGTAGGCCAGCCCATCTCCACGGGTAGCCAGACCCTTGTTGCCAAAAAGACTGTGGTCGTCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp TGTGTTTGGTGCCGAGTTTGTGAAGACCTTTCTGACTaGCTGAGGCTGGCCCAACACGTGCTGTGGGAAGGC +
Preference number: 6 (lower is better)
Translates to: CVWCRVCEDLSD*LRLAQHVLWEG
Trigger: GCCTTCCCACAGCACGTGTTGGGCCAGCCTCAGCCAGTCAGAAAGGTCTTCACAAACTCGGCACCAAACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp GTCCTGTGGGTCCAGAAAATCAGCAGAGAACATGCTTaGCGCAGTGGTACTCAGTGGAGTGAGCCCGGAGGA +
Preference number: 6 (lower is better)
Translates to: VLWVQKISREHA*RSGTQWSEPGG
Trigger: TCCTCCGGGCTCACTCCACTGAGTACCACTGCGCCAAGCATGTTCTCTGCTGATTTTCTGGACCCACAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 72 bp CTGACAAGCTCAGAGCGGTCTGGGCGGCTCCGGATCTaGTGCTTCAGAAAATTCTCAGTTCTGGCTCGCTCC +
Preference number: 6 (lower is better)
Translates to: LTSSERSGRLRI*CFRKFSVLARS
Trigger: GGAGCGAGCCAGAACTGAGAATTTTCTGAAGCACAAGATCCGGAGCCGCCCAGACCGCTCTGAGCTTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 72 bp TGGGGGCTGGAGCAGTCAGGGAGTGAGGCCTCATCCTaGATGGAGGACCCAACACTGCCATGTTTAGGATCT +
Preference number: 6 (lower is better)
Translates to: WGLEQSGSEASS*MEDPTLPCLGS
Trigger: AGATCCTAAACATGGCAGTGTTGGGTCCTCCATCAAGGATGAGGCCTCACTCCCTGACTGCTCCAGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 90 bp GGTGGTGCTATTTGGACCTGGGGCGGTGGTCGAGAGACCACGGTATaGACTGGCATTGTGGTGATGCTGGCTGTCACTGGTTTCATCTTG +
Preference number: 6 (lower is better)
Translates to: GGAIWTWGGGRETTV*TGIVVMLAVTGFIL
Trigger: CAAGATGAAACCAGTGACAGCCAGCATCACCACAATGCCAGTCAATACCGTGGTCTCTCGACCACCGCCCCAGGTCCAAATAGCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 90 bp AGCCCGGAGGATGTGGTGGGCATGGTAATGTCTAGCCACTCCATGTaGTCCAGGTTGGAGTCTGACAGGTCAAGAGATAGACAGGGGGTC +
Preference number: 6 (lower is better)
Translates to: SPEDVVGMVMSSHSM*SRLESDRSRDRQGV
Trigger: GACCCCCTGTCTATCTCTTGACCTGTCAGACTCCAACCTGGACAACATGGAGTGGCTAGACATTACCATGCCCACCACATCCTCCGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS TCA 72 bp ATGGCTTTGCTTCACCAGCATTGGGCCAGACTTCGCTaGGGACACAGTGTTTGTAGGGAGCACGGGAGCTGT +
Preference number: 6 (lower is better)
Translates to: MALLHQHWARLR*GHSVCREHGSC
Trigger: ACAGCTCCCGTGCTCCCTACAAACACTGTGTCCTCAGCGAAGTCTGGCCCAATGCTGGTGAAGCAAAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp ACTAAGGTAGAACTGCGAGACAACGTTCTGCTGCTCTaGTTGGGCCATGGGGACCTCTTGCTTGACGACCAC +
Preference number: 6 (lower is better)
Translates to: TKVELRDNVLLL*LGHGDLLLDDH
Trigger: GTGGTCGTCAAGCAAGAGGTCCCCATGGCCCAAGCAGAGCAGCAGAACGTTGTCTCGCAGTTCTACCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp ACTGGAAACCTCTGGAAGGGCTGGCTGTGTGCTACGTaGCTGCTTGATGGCTTCCTCATATCGAGGTGGATC +
Preference number: 6 (lower is better)
Translates to: TGNLWKGWLCAT*LLDGFLISRWI
Trigger: GATCCACCTCGATATGAGGAAGCCATCAAGCAGGCACGTAGCACACAGCCAGCCCTTCCAGAGGTTTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp ACAGGTTCTAAGGATACAGGTGGTGCTATTTGGACCTaGGGCGGTGGTCGAGAGACCACGGTATTGACTGGC +
Preference number: 6 (lower is better)
Translates to: TGSKDTGGAIWT*GGGRETTVLTG
Trigger: GCCAGTCAATACCGTGGTCTCTCGACCACCGCCCCAGGTCCAAATAGCACCACCTGTATCCTTAGAACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 72 bp CTGCTACTGCCGCTGTTACTGCCGCTGCTGCTGTTCTaGTCAGTTTTGATGGGTGCAGGTAGGATGGTCTGG +
Preference number: 6 (lower is better)
Translates to: LLLPLLLPLLLF*SVLMGAGRMVW
Trigger: CCAGACCATCCTACCTGCACCCATCAAAACTGACAAGAACAGCAGCAGCGGCAGTAACAGCGGCAGTAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 72 bp AAGGTAGAACTGCGAGACAACGTTCTGCTGCTCTGCTaGGGCCATGGGGACCTCTTGCTTGACGACCACAGT +
Preference number: 6 (lower is better)
Translates to: KVELRDNVLLLC*GHGDLLLDDHS
Trigger: ACTGTGGTCGTCAAGCAAGAGGTCCCCATGGCCCAAGCAGAGCAGCAGAACGTTGTCTCGCAGTTCTACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 90 bp CTGGGAACTAAGGTAGAACTGCGAGACAACGTTCTGCTGCTCTGCTaGGGCCATGGGGACCTCTTGCTTGACGACCACAGTCTTTTTGGC +
Preference number: 6 (lower is better)
Translates to: LGTKVELRDNVLLLC*GHGDLLLDDHSLFG
Trigger: GCCAAAAAGACTGTGGTCGTCAAGCAAGAGGTCCCCATGGCCCAAGCAGAGCAGCAGAACGTTGTCTCGCAGTTCTACCTTAGTTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 90 bp GATGTGGTGGGCATGGTAATGTCTAGCCACTCCATGTTGTCCAGGTaGGAGTCTGACAGGTCAAGAGATAGACAGGGGGTCCCTGACACC +
Preference number: 6 (lower is better)
Translates to: DVVGMVMSSHSMLSR*ESDRSRDRQGVPDT
Trigger: GGTGTCAGGGACCCCCTGTCTATCTCTTGACCTGTCAGACTCCAACCTGGACAACATGGAGTGGCTAGACATTACCATGCCCACCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp GGCTCGCTCCAGGCTTTTTATCTGCTCATGGAATGCTaGTGGACTCTTCAAAGGTGGCATGATGCCCTGGTC +
Preference number: 6 (lower is better)
Translates to: GSLQAFYLLMEC*WTLQRWHDALV
Trigger: GACCAGGGCATCATGCCACCTTTGAAGAGTCCAGCAGCATTCCATGAGCAGATAAAAAGCCTGGAGCGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp GATCCTCGATCAGAGAGAAAGACTCTCTATCTTCACTaGTGTTCTGCAGTGGGCCAGTGTCAGTGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: DPRSERKTLYLH*CSAVGQCQWPR
Trigger: CCTCGGCCACTGACACTGGCCCACTGCAGAACAGCAGTGAAGATAGAGAGTCTTTCTCTCTGATCGAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp GTAGGGAGCACGGGAGCTGTAGACCTTGTGGGAGGCTaGTCTGCAGTTAGAGGGGTTTTCAAGAATTCAGGA +
Preference number: 6 (lower is better)
Translates to: VGSTGAVDLVGG*SAVRGVFKNSG
Trigger: TCCTGAATTCTTGAAAACCCCTCTAACTGCAGACCAGCCTCCCACAAGGTCTACAGCTCCCGTGCTCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp CTGTTCACAGGTTCTAAGGATACAGGTGGTGCTATTTaGACCTGGGGCGGTGGTCGAGAGACCACGGTATTG +
Preference number: 6 (lower is better)
Translates to: LFTGSKDTGGAI*TWGGGRETTVL
Trigger: CAATACCGTGGTCTCTCGACCACCGCCCCAGGTCCAAATAGCACCACCTGTATCCTTAGAACCTGTGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp TATCTTCACTGCTGTTCTGCAGTGGGCCAGTGTCAGTaGCCGAGGGCAAAGTGCCATCCAAGAAGGCTTCTA +
Preference number: 6 (lower is better)
Translates to: YLHCCSAVGQCQ*PRAKCHPRRLL
Trigger: TAGAAGCCTTCTTGGATGGCACTTTGCCCTCGGCCACTGACACTGGCCCACTGCAGAACAGCAGTGAAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 72 bp ACCTCTGGAAGGGCTGGCTGTGTGCTACGTGCCTGCTaGATGGCTTCCTCATATCGAGGTGGATCTTTTGTC +
Preference number: 6 (lower is better)
Translates to: TSGRAGCVLRAC*MASSYRGGSFV
Trigger: GACAAAAGATCCACCTCGATATGAGGAAGCCATCAAGCAGGCACGTAGCACACAGCCAGCCCTTCCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 90 bp GAGACAGTTCCTGGAATTCGTGAGCCACAGACTCACTTTGAGGACTaGGTGCAAGATGGGCTAGAGGCCCCAGCTCTTCCTCTGTGTCTA +
Preference number: 6 (lower is better)
Translates to: ETVPGIREPQTHFED*VQDGLEAPALPLCL
Trigger: TAGACACAGAGGAAGAGCTGGGGCCTCTAGCCCATCTTGCACCAAGTCCTCAAAGTGAGTCTGTGGCTCACGAATTCCAGGAACTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000009713.14
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS GCA 72 bp AGAGTGGGCATTTTCAACATGGGGCACACTGCTGGTTaGAGGAAGTGCCAAGTCTGCCTTGAAAGTGGACAC +
Preference number: 6 (lower is better)
Translates to: RVGIFNMGHTAG*RKCQVCLESGH
Trigger: GTGTCCACTTTCAAGGCAGACTTGGCACTTCCTGCAACCAGCAGTGTGCCCCATGTTGAAAATGCCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp GCCAGGCTGCCTCTGATACTGAAGAACTGTGTTTGGTaGCGAGTTTGTGAAGACCTTTCTGACTGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: ARLPLILKNCVW*RVCEDLSDWLR
Trigger: CCTCAGCCAGTCAGAAAGGTCTTCACAAACTCGGCACCAAACACAGTTCTTCAGTATCAGAGGCAGCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp GAAACCTCTGGAAGGGCTGGCTGTGTGCTACGTGCCTaGTTGATGGCTTCCTCATATCGAGGTGGATCTTTT +
Preference number: 6 (lower is better)
Translates to: ETSGRAGCVLRA*LMASSYRGGSF
Trigger: AAAAGATCCACCTCGATATGAGGAAGCCATCAAGCAGGCACGTAGCACACAGCCAGCCCTTCCAGAGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp ATCAGAGAGAAAGACTCTCTATCTTCACTGCTGTTCTaGAGTGGGCCAGTGTCAGTGGCCGAGGGCAAAGTG +
Preference number: 6 (lower is better)
Translates to: IREKDSLSSLLF*SGPVSVAEGKV
Trigger: CACTTTGCCCTCGGCCACTGACACTGGCCCACTGCAGAACAGCAGTGAAGATAGAGAGTCTTTCTCTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp CAGAGGTCTCCATGGGAGAGTGAGACTGGTACAGCATaGTGGAATGACTCAGCAAGTCGTTCTGCAGATCCT +
Preference number: 6 (lower is better)
Translates to: QRSPWESETGTA*WNDSASRSADP
Trigger: AGGATCTGCAGAACGACTTGCTGAGTCATTCCAGCATGCTGTACCAGTCTCACTCTCCCATGGAGACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp TCGCTCCAGGCTTTTTATCTGCTCATGGAATGCTGCTaGACTCTTCAAAGGTGGCATGATGCCCTGGTCCAC +
Preference number: 6 (lower is better)
Translates to: SLQAFYLLMECC*TLQRWHDALVH
Trigger: GTGGACCAGGGCATCATGCCACCTTTGAAGAGTCCAGCAGCATTCCATGAGCAGATAAAAAGCCTGGAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp TGGGCCAGGCTGCCTCTGATACTGAAGAACTGTGTTTaGTGCCGAGTTTGTGAAGACCTTTCTGACTGGCTG +
Preference number: 6 (lower is better)
Translates to: WARLPLILKNCV*CRVCEDLSDWL
Trigger: CAGCCAGTCAGAAAGGTCTTCACAAACTCGGCACCAAACACAGTTCTTCAGTATCAGAGGCAGCCTGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 72 bp CGCTGCTGCCCACGTTTTTCCACCTCAAGCTGCATCTaGAGGACCTCCACAAGCTTCTGTTCTTGTTCCAGT +
Preference number: 6 (lower is better)
Translates to: RCCPRFSTSSCI*RTSTSFCSCSS
Trigger: ACTGGAACAAGAACAGAAGCTTGTGGAGGTCCTCAAGATGCAGCTTGAGGTGGAAAAACGTGGGCAGCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 72 bp GGCATGGTAATGTCTAGCCACTCCATGTTGTCCAGGTaGGAGTCTGACAGGTCAAGAGATAGACAGGGGGTC +
Preference number: 6 (lower is better)
Translates to: GMVMSSHSMLSR*ESDRSRDRQGV
Trigger: GACCCCCTGTCTATCTCTTGACCTGTCAGACTCCAACCTGGACAACATGGAGTGGCTAGACATTACCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 90 bp ATATGCATCCTGACAAGCTCAGAGCGGTCTGGGCGGCTCCGGATCTaGTGCTTCAGAAAATTCTCAGTTCTGGCTCGCTCCAGGCTTTTT +
Preference number: 6 (lower is better)
Translates to: ICILTSSERSGRLRI*CFRKFSVLARSRLF
Trigger: AAAAAGCCTGGAGCGAGCCAGAACTGAGAATTTTCTGAAGCACAAGATCCGGAGCCGCCCAGACCGCTCTGAGCTTGTCAGGATGCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 90 bp TCTGGTGGTCGCTGCTGCCCACGTTTTTCCACCTCAAGCTGCATCTaGAGGACCTCCACAAGCTTCTGTTCTTGTTCCAGTTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: SGGRCCPRFSTSSCI*RTSTSFCSCSSFLF
Trigger: GAAGAGGAAACTGGAACAAGAACAGAAGCTTGTGGAGGTCCTCAAGATGCAGCTTGAGGTGGAAAAACGTGGGCAGCAGCGACCACCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 90 bp ACACTGGAAACCTCTGGAAGGGCTGGCTGTGTGCTACGTGCCTGCTaGATGGCTTCCTCATATCGAGGTGGATCTTTTGTCTTCGTGATT +
Preference number: 6 (lower is better)
Translates to: TLETSGRAGCVLRAC*MASSYRGGSFVFVI
Trigger: AATCACGAAGACAAAAGATCCACCTCGATATGAGGAAGCCATCAAGCAGGCACGTAGCACACAGCCAGCCCTTCCAGAGGTTTCCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS TCA 72 bp ATGGCTCTGCAAACGTTTCTTCTAAAATATGCATCCTaGCAAGCTCAGAGCGGTCTGGGCGGCTCCGGATCT +
Preference number: 6 (lower is better)
Translates to: MALQTFLLKYAS*QAQSGLGGSGS
Trigger: AGATCCGGAGCCGCCCAGACCGCTCTGAGCTTGTCAGGATGCATATTTTAGAAGAAACGTTTGCAGAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp CCCTGGTCCACTAGTTGTTCTCTTGTCCTCCTTTGTTaGAGCCTCAGCTGGAGCACATTTTTCCGTTCGTTC +
Preference number: 6 (lower is better)
Translates to: PWSTSCSLVLLC*SLSWSTFFRSF
Trigger: GAACGAACGGAAAAATGTGCTCCAGCTGAGGCTGCAACAAAGGAGGACAAGAGAACAACTAGTGGACCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009713.14
CDS GCA 72 bp CCTGGCTCGCTGGCTGGTCTGGAGACAAAGCATCACTaGTATCTTCATCAAATGAGAACTCGCCATGAGTGT +
Preference number: 6 (lower is better)
Translates to: PGSLAGLETKHH*YLHQMRTRHEC
Trigger: ACACTCATGGCGAGTTCTCATTTGATGAAGATAGCAGTGATGCTTTGTCTCCAGACCAGCCAGCGAGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp CCCTGGTCCACTAGTTGTTCTCTTGTCCTCCTTTGTTaGAGCCTCAGCTGGAGCACTTCCTTGAGACTTTTC +
Preference number: 6 (lower is better)
Translates to: PWSTSCSLVLLC*SLSWSTSLRLF
Trigger: GAAAAGTCTCAAGGAAGTGCTCCAGCTGAGGCTGCAACAAAGGAGGACAAGAGAACAACTAGTGGACCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS CCA 72 bp GTTAGAGGTCTTACTGACAAAGGGCTGCTGGTTCGTTaGGCCAGGCTGCCTCTGATACTGAAGAACTGTGTT +
Preference number: 6 (lower is better)
Translates to: VRGLTDKGLLVR*ARLPLILKNCV
Trigger: AACACAGTTCTTCAGTATCAGAGGCAGCCTGGCCCAACGAACCAGCAGCCCTTTGTCAGTAAGACCTCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp GCCGAGGGCAAAGTGCCATCCAAGAAGGCTTCTAGCTaGTTCTCTAAGCTGGCAGATAAACTGTTCACAGGT +
Preference number: 6 (lower is better)
Translates to: AEGKVPSKKASS*FSKLADKLFTG
Trigger: ACCTGTGAACAGTTTATCTGCCAGCTTAGAGAACCAGCTAGAAGCCTTCTTGGATGGCACTTTGCCCTCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS TCA 72 bp GGGTTTCAGGCGTTCAATGAGGTCTGGTTTAGTTCCTaGCACTGGCAGACCCCTCAGTTTGAGTTCTGTCTT +
Preference number: 6 (lower is better)
Translates to: GFQAFNEVWFSS*HWQTPQFEFCL
Trigger: AAGACAGAACTCAAACTGAGGGGTCTGCCAGTGTCAGGAACTAAACCAGACCTCATTGAACGCCTGAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS TCA 72 bp GCACACTGCTGGTTGCAGGAAGTGCCAAGTCTGCCTTaGAAGTGGACACAGAGCTTGTTACAGCATTATGCA +
Preference number: 6 (lower is better)
Translates to: AHCWLQEVPSLP*KWTQSLLQHYA
Trigger: TGCATAATGCTGTAACAAGCTCTGTGTCCACTTTCAAGGCAGACTTGGCACTTCCTGCAACCAGCAGTGTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp TGGAGCACATTTTTCCGTTCGTTCAGAGTGGGTAAGTaGTGGCTGGACTGTAGAGACAGTTCCTGGAATTCG +
Preference number: 6 (lower is better)
Translates to: WSTFFRSFRVGK*WLDCRDSSWNS
Trigger: CGAATTCCAGGAACTGTCTCTACAGTCCAGCCAGCACTTACCCACTCTGAACGAACGGAAAAATGTGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009713.14
CDS GCA 72 bp GCTTGTTACAGCATTATGCAGTGTTGTGACTGGCAGTaGCACTGTGACCTCTGGGTTACTGGTGACAATGGT +
Preference number: 6 (lower is better)
Translates to: ACYSIMQCCDWQ*HCDLWVTGDNG
Trigger: ACCATTGTCACCAGTAACCCAGAGGTCACAGTGGCACTGCCAGTCACAACACTGCATAATGCTGTAACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp GCCTTGAAAGTGGACACAGAGCTTGTTACAGCATTATaGAGTGTTGTGACTGGCAGTGCCACTGTGACCTCT +
Preference number: 6 (lower is better)
Translates to: ALKVDTELVTAL*SVVTGSATVTS
Trigger: AGAGGTCACAGTGGCACTGCCAGTCACAACACTGCATAATGCTGTAACAAGCTCTGTGTCCACTTTCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp ATTTTCAACATGGGGCACACTGCTGGTTGCAGGAAGTaGCAAGTCTGCCTTGAAAGTGGACACAGAGCTTGT +
Preference number: 6 (lower is better)
Translates to: IFNMGHTAGCRK*QVCLESGHRAC
Trigger: ACAAGCTCTGTGTCCACTTTCAAGGCAGACTTGGCACTTCCTGCAACCAGCAGTGTGCCCCATGTTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp AACCATCCAAACACCTGGCAGGTTCTAAATGCAGCCTaGAGGAACCCAAGACTAGTGGCAAATGAGGCTTCT +
Preference number: 6 (lower is better)
Translates to: NHPNTWQVLNAA*RNPRLVANEAS
Trigger: AGAAGCCTCATTTGCCACTAGTCTTGGGTTCCTGCAGGCTGCATTTAGAACCTGCCAGGTGTTTGGATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS CCA 72 bp CATTTTTCCGTTCGTTCAGAGTGGGTAAGTGCTGGCTaGACTGTAGAGACAGTTCCTGGAATTCGTGAGCCA +
Preference number: 6 (lower is better)
Translates to: HFSVRSEWVSAG*TVETVPGIREP
Trigger: TGGCTCACGAATTCCAGGAACTGTCTCTACAGTCCAGCCAGCACTTACCCACTCTGAACGAACGGAAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000009713.14
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS CCA 72 bp AATGCTGCTGGACTCTTCAAAGGTGGCATGATGCCCTaGTCCACTAGTTGTTCTCTTGTCCTCCTTTGTTGC +
Preference number: 6 (lower is better)
Translates to: NAAGLFKGGMMP*STSCSLVLLCC
Trigger: GCAACAAAGGAGGACAAGAGAACAACTAGTGGACCAGGGCATCATGCCACCTTTGAAGAGTCCAGCAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp CAATGGTTGCTGATGACACTGCCACAATACTGCCAGTaGCAAGGTTACTACTGGTCACTTCCTGGTAGGGTT +
Preference number: 6 (lower is better)
Translates to: QWLLMTLPQYCQ*QGYYWSLPGRV
Trigger: AACCCTACCAGGAAGTGACCAGTAGTAACCTTGCCACTGGCAGTATTGTGGCAGTGTCATCAGCAACCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 72 bp GATGTGGTGGGCATGGTAATGTCTAGCCACTCCATGTaGTCCAGGTTGGAGTCTGACAGGTCAAGAGATAGA +
Preference number: 6 (lower is better)
Translates to: DVVGMVMSSHSM*SRLESDRSRDR
Trigger: TCTATCTCTTGACCTGTCAGACTCCAACCTGGACAACATGGAGTGGCTAGACATTACCATGCCCACCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp AAATTCTCAGTTCTGGCTCGCTCCAGGCTTTTTATCTaGTCATGGAATGCTGCTGGACTCTTCAAAGGTGGC +
Preference number: 6 (lower is better)
Translates to: KFSVLARSRLFI*SWNAAGLFKGG
Trigger: GCCACCTTTGAAGAGTCCAGCAGCATTCCATGAGCAGATAAAAAGCCTGGAGCGAGCCAGAACTGAGAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp GGCTCCGGATCTTGTGCTTCAGAAAATTCTCAGTTCTaGCTCGCTCCAGGCTTTTTATCTGCTCATGGAATG +
Preference number: 6 (lower is better)
Translates to: GSGSCASENSQF*LAPGFLSAHGM
Trigger: CATTCCATGAGCAGATAAAAAGCCTGGAGCGAGCCAGAACTGAGAATTTTCTGAAGCACAAGATCCGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp TTTTTGCTACGGTGTTTGTCGTTTGGATTCTTGGGATaGCTTTGCTTCACCAGCATTGGGCCAGACTTCGCT +
Preference number: 6 (lower is better)
Translates to: FLLRCLSFGFLG*LCFTSIGPDFA
Trigger: AGCGAAGTCTGGCCCAATGCTGGTGAAGCAAAGCCATCCCAAGAATCCAAACGACAAACACCGTAGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS GCA 72 bp ATACTTCCATTTTTCCGTTCGTTCAGAGTGGGTAAGTaGTGGCTGGACTGTAGAGACAGTTCCTGGAATTCG +
Preference number: 6 (lower is better)
Translates to: ILPFFRSFRVGK*WLDCRDSSWNS
Trigger: CGAATTCCAGGAACTGTCTCTACAGTCCAGCCAGCACTTACCCACTCTGAACGAACGGAAAAATGGAAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS CAA 72 bp AGCCTCAGCTGGAGCACTTCCTTGAGACTTTTCTGGTaGCTTCCCTCAAGGCATTCCTTTTCTTTGAAAGGT +
Preference number: 6 (lower is better)
Translates to: SLSWSTSLRLFW*LPSRHSFSLKG
Trigger: ACCTTTCAAAGAAAAGGAATGCCTTGAGGGAAGCAACCAGAAAAGTCTCAAGGAAGTGCTCCAGCTGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149359.2
CDS TCA 72 bp AAATGCAGCCTGCAGGAACCCAAGACTAGTGGCAAATaGGGCTTCTTGCTTTTCTTATTATGTCCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: KCSLQEPKTSGK*GFLLFLLCPVL
Trigger: GAGCACAGGACATAATAAGAAAAGCAAGAAGCCTCATTTGCCACTAGTCTTGGGTTCCTGCAGGCTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056715.7
ENSMUST00000115809.8
CDS CCA 72 bp TGCCATCCAAGAAGGCTTCTAGCTGGTTCTCTAAGCTaGCAGATAAACTGTTCACAGGTTCTAAGGATACAG +
Preference number: 6 (lower is better)
Translates to: CHPRRLLAGSLS*QINCSQVLRIQ
Trigger: CTGTATCCTTAGAACCTGTGAACAGTTTATCTGCCAGCTTAGAGAACCAGCTAGAAGCCTTCTTGGATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CAA 72 bp AGCTTCTTCACTCGCGGTTTCGGATCTTTGCATTTTTaGCTACGGTGTTTGTCGTTTGGATTCTTGGGATGG +
Preference number: 6 (lower is better)
Translates to: SFFTRGFGSLHF*LRCLSFGFLGW
Trigger: CCATCCCAAGAATCCAAACGACAAACACCGTAGCAAAAAATGCAAAGATCCGAAACCGCGAGTGAAGAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS TCA 72 bp TGGCTTCCTCATATCGAGGTGGATCTTTTGTCTTCGTaGTTGGGGTTGCAAACAAAGAGTGCTGAACAACAA +
Preference number: 6 (lower is better)
Translates to: WLPHIEVDLLSS*LGLQTKSAEQQ
Trigger: TTGTTGTTCAGCACTCTTTGTTTGCAACCCCAATCACGAAGACAAAAGATCCACCTCGATATGAGGAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2
CDS CCA 72 bp TTCCTCATATCGAGGTGGATCTTTTGTCTTCGTGATTaGGGTTGCAAACAAAGAGTGCTGAACAACAAACTG +
Preference number: 6 (lower is better)
Translates to: FLISRWIFCLRD*GCKQRVLNNKL
Trigger: CAGTTTGTTGTTCAGCACTCTTTGTTTGCAACCCCAATCACGAAGACAAAAGATCCACCTCGATATGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009713.14
ENSMUST00000149359.2