Pregenerated sensors for MRS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021339Ensembl transcript IDs: ENSMUST00000021772.4
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCCCTGGGCCTTCCTTGCCTCTCTGTTGCCAGCTGAGCTGCCATaGCCTGGGCAGCTCCCCTCTGCCACAGCACCCTGCTTCTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: DPWAFLASLLPAELP*PGQLPSATAPCFFP Trigger: GGGGAAGAAGCAGGGTGCTGTGGCAGAGGGGAGCTGCCCAGGTCATGGCAGCTCAGCTGGCAACAGAGAGGCAAGGAAGGCCCAGGGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR TCA 90 bp | GTTGTATCAGGACCCCTGGGCCTTCCTTGCCTCTCTGTTGCCAGCTaGGCTGCCATGACCTGGGCAGCTCCCCTCTGCCACAGCACCCTG | + |
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Preference number: 1 (lower is better) Translates to: VVSGPLGLPCLSVAS*AAMTWAAPLCHSTL Trigger: CAGGGTGCTGTGGCAGAGGGGAGCTGCCCAGGTCATGGCAGCTCAGCTGGCAACAGAGAGGCAAGGAAGGCCCAGGGGTCCTGATACAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR GCA 90 bp | ATCAGGACCCCTGGGCCTTCCTTGCCTCTCTGTTGCCAGCTGAGCTaGCATGACCTGGGCAGCTCCCCTCTGCCACAGCACCCTGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: IRTPGPSLPLCCQLS*HDLGSSPLPQHPAS Trigger: AGAAGCAGGGTGCTGTGGCAGAGGGGAGCTGCCCAGGTCATGGCAGCTCAGCTGGCAACAGAGAGGCAAGGAAGGCCCAGGGGTCCTGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR GCA 90 bp | GTACTGGGTTGTATCAGGACCCCTGGGCCTTCCTTGCCTCTCTGTTaGCAGCTGAGCTGCCATGACCTGGGCAGCTCCCCTCTGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: VLGCIRTPGPSLPLC*QLSCHDLGSSPLPQ Trigger: CTGTGGCAGAGGGGAGCTGCCCAGGTCATGGCAGCTCAGCTGGCAACAGAGAGGCAAGGAAGGCCCAGGGGTCCTGATACAACCCAGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR GCA 90 bp | CAGCAATTAGCAAATGTAAATGGCAAGGCGAACCCCAGAGCCTTGTaGACAGCAGGCAGGGGCTCCCTCAACCCAGCCACACAGTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: QQLANVNGKANPRAL*TAGRGSLNPATQCQ Trigger: CTGGCACTGTGTGGCTGGGTTGAGGGAGCCCCTGCCTGCTGTGCACAAGGCTCTGGGGTTCGCCTTGCCATTTACATTTGCTAATTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CCA 90 bp | TCTCCGGTGGAGCGAAACCTGGGACAGCCAGGCTGCCTAGAAATATaGTCAGCTATGTGTGGACGCCGTGTGATAGGAGCAGCAGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: SPVERNLGQPGCLEI*SAMCGRRVIGAAGC Trigger: ACAGCCTGCTGCTCCTATCACACGGCGTCCACACATAGCTGACCATATTTCTAGGCAGCCTGGCTGTCCCAGGTTTCGCTCCACCGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CCA 90 bp | CCATGTCAGTTGGTGAGCCTCAGCAGGACATTGACTCTGCTTCACTaGACAGCCGAGAAGACAGAGCAGTCCGACACGGCCAAGTCTCCG | + |
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Preference number: 1 (lower is better) Translates to: PCQLVSLSRTLTLLH*TAEKTEQSDTAKSP Trigger: CGGAGACTTGGCCGTGTCGGACTGCTCTGTCTTCTCGGCTGTCCAGTGAAGCAGAGTCAATGTCCTGCTGAGGCTCACCAACTGACATGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR TCA 90 bp | CTTCACAGGATGACCTCTGCTCTGCCCACATGGGCTCAGAGGCTCTaGACGTTAAGGACAGACCGGATCCCACCTCTTTGCTCACACCTG | + |
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Preference number: 1 (lower is better) Translates to: LHRMTSALPTWAQRL*TLRTDRIPPLCSHL Trigger: CAGGTGTGAGCAAAGAGGTGGGATCCGGTCTGTCCTTAACGTTCAGAGCCTCTGAGCCCATGTGGGCAGAGCAGAGGTCATCCTGTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR GCA 90 bp | AGTGCTGTCTGTCTTGTGTCCTCCACAGAACCAAGTGGTTGTTGCTaGTGGAAGGAGTTCTTGGGGAGCCCGGCTCTCTGGGGCACTTCA | + |
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Preference number: 1 (lower is better) Translates to: SAVCLVSSTEPSGCC*WKEFLGSPALWGTS Trigger: TGAAGTGCCCCAGAGAGCCGGGCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACTTGGTTCTGTGGAGGACACAAGACAGACAGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR GCA 90 bp | ACTAGTGCTGTCTGTCTTGTGTCCTCCACAGAACCAAGTGGTTGTTaGTGCTGGAAGGAGTTCTTGGGGAGCCCGGCTCTCTGGGGCACT | + |
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Preference number: 1 (lower is better) Translates to: TSAVCLVSSTEPSGC*CWKEFLGSPALWGT Trigger: AGTGCCCCAGAGAGCCGGGCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACTTGGTTCTGTGGAGGACACAAGACAGACAGCACTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CCA 90 bp | TGTCCTCCACAGAACCAAGTGGTTGTTGCTGCTGGAAGGAGTTCTTaGGGAGCCCGGCTCTCTGGGGCACTTCATGTCTACAGCTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: CPPQNQVVVAAGRSS*GARLSGALHVYSFS Trigger: GCTGAAGCTGTAGACATGAAGTGCCCCAGAGAGCCGGGCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACTTGGTTCTGTGGAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CCA 90 bp | GCTGTCTGTCTTGTGTCCTCCACAGAACCAAGTGGTTGTTGCTGCTaGAAGGAGTTCTTGGGGAGCCCGGCTCTCTGGGGCACTTCATGT | + |
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Preference number: 1 (lower is better) Translates to: AVCLVSSTEPSGCCC*KEFLGSPALWGTSC Trigger: ACATGAAGTGCCCCAGAGAGCCGGGCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACTTGGTTCTGTGGAGGACACAAGACAGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CCA 90 bp | AGTGGTTGTTGCTGCTGGAAGGAGTTCTTGGGGAGCCCGGCTCTCTaGGGCACTTCATGTCTACAGCTTCAGCTCAGACTAAAGACGGCA | + |
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Preference number: 1 (lower is better) Translates to: SGCCCWKEFLGSPAL*GTSCLQLQLRLKTA Trigger: TGCCGTCTTTAGTCTGAGCTGAAGCTGTAGACATGAAGTGCCCCAGAGAGCCGGGCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CCA 90 bp | AGCTTCACTGCAGCCAATCACAGAAATGAAGCTGAGCGCAGCTCCTaGATCCCAGCACCCAGCAGCCTGTCAGTGAGCTGTTTAGCCTAT | + |
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Preference number: 1 (lower is better) Translates to: SFTAANHRNEAERSS*IPAPSSLSVSCLAY Trigger: ATAGGCTAAACAGCTCACTGACAGGCTGCTGGGTGCTGGGATCCAGGAGCTGCGCTCAGCTTCATTTCTGTGATTGGCTGCAGTGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR GCA 90 bp | GCCTATTCCAGTCTGCTGTCAGGAATCACTTCACAGGATGACCTCTaGTCTGCCCACATGGGCTCAGAGGCTCTGAACGTTAAGGACAGA | + |
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Preference number: 1 (lower is better) Translates to: AYSSLLSGITSQDDL*SAHMGSEALNVKDR Trigger: TCTGTCCTTAACGTTCAGAGCCTCTGAGCCCATGTGGGCAGAGCAGAGGTCATCCTGTGAAGTGATTCCTGACAGCAGACTGGAATAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CCA 90 bp | GAATTCAGGCTGTCAGGCTCGGCAGCAACCTCATGGGTAACATCCTaGGTGCCTGGTCCGTCTTTTAATAAGTCTAGACCAGTGGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: EFRLSGSAATSWVTS*VPGPSFNKSRPVVL Trigger: GAGGACCACTGGTCTAGACTTATTAAAAGACGGACCAGGCACCCAGGATGTTACCCATGAGGTTGCTGCCGAGCCTGACAGCCTGAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CCA 90 bp | CCCTTGTACAACAGTGGGGTTTGGAACTTATCAGATCTGAGAAAGTaGCGTCTGAACAAAGAGAGAGACACAAGTTCTGGCTGTGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: PLYNSGVWNLSDLRK*RLNKERDTSSGCGV Trigger: CACCCCACAGCCAGAACTTGTGTCTCTCTCTTTGTTCAGACGCCACTTTCTCAGATCTGATAAGTTCCAAACCCCACTGTTGTACAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CCA 90 bp | TGTCTATGCAGAACTCGTGGTTCTGAGATGGTTAGACCAGGGAGATaGCAAGCAGCCAGGAAGTTTAACTTTTGGGGAGGAGCATGGTTT | + |
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Preference number: 1 (lower is better) Translates to: CLCRTRGSEMVRPGR*QAARKFNFWGGAWF Trigger: AAACCATGCTCCTCCCCAAAAGTTAAACTTCCTGGCTGCTTGCCATCTCCCTGGTCTAACCATCTCAGAACCACGAGTTCTGCATAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR GCA 90 bp | GGCCAGCATTGCTTTTATGTGTACTTCAGAGCACAGAATGACGTCTaGTTCATGGTGGGAATGTCACTAGTGCTGTCTGTCTTGTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: GQHCFYVYFRAQNDV*FMVGMSLVLSVLCP Trigger: AGGACACAAGACAGACAGCACTAGTGACATTCCCACCATGAAGCAGACGTCATTCTGTGCTCTGAAGTACACATAAAAGCAATGCTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR GCA 90 bp | ACAAAGAGAGAGACACAAGTTCTGGCTGTGGGGTGTGGCCAGCATTaGTTTTATGTGTACTTCAGAGCACAGAATGACGTCTGCTTCATG | + |
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Preference number: 1 (lower is better) Translates to: TKRETQVLAVGCGQH*FYVYFRAQNDVCFM Trigger: CATGAAGCAGACGTCATTCTGTGCTCTGAAGTACACATAAAAGCAATGCTGGCCACACCCCACAGCCAGAACTTGTGTCTCTCTCTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CCA 90 bp | AGATCTGAGAAAGTGGCGTCTGAACAAAGAGAGAGACACAAGTTCTaGCTGTGGGGTGTGGCCAGCATTGCTTTTATGTGTACTTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: RSEKVASEQRERHKF*LWGVASIAFMCTSE Trigger: CTCTGAAGTACACATAAAAGCAATGCTGGCCACACCCCACAGCCAGAACTTGTGTCTCTCTCTTTGTTCAGACGCCACTTTCTCAGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR TCA 90 bp | GTTAAGGACAGACCGGATCCCACCTCTTTGCTCACACCTGATGTGTaGCTGCTTTCTCAATCACTAAACTCAGTATTTGCTATTTACAGT | + |
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Preference number: 1 (lower is better) Translates to: VKDRPDPTSLLTPDV*LLSQSLNSVFAIYS Trigger: ACTGTAAATAGCAAATACTGAGTTTAGTGATTGAGAAAGCAGTCACACATCAGGTGTGAGCAAAGAGGTGGGATCCGGTCTGTCCTTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR TCA 90 bp | CTCGTGGTGCTCAGAGGAGCAGGGGAGAGCCTTTGCTCTCTCTTCCCACCATTCCTGTATGAAACCTCCTaGGAACACACAAGGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LVVLRGAGESLCSLFPPFLYETS*EHTRAG Trigger: GCCTGCCCTTGTGTGTTCTCAGGAGGTTTCATACAG...GAATGGTGGGAAGAGAGAGCAAAGGCTCTCCCCTGCTCCTCTGAGCACCACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR GCA 90 bp | TGGGGTGTGGCCAGCATTGCTTTTATGTGTACTTCAGAGCACAGAATGACGTCTAACCCCAGAGCCTTGTaGACAGCAGGCAGGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: WGVASIAFMCTSEHRMTSNPRAL*TAGRGS Trigger: GGAGCCCCTGCCTGCTGTGCACAAGGCTCTGGGGTT...AGACGTCATTCTGTGCTCTGAAGTACACATAAAAGCAATGCTGGCCACACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CAA 90 bp | AGCAGGCAGGGGCTCCCTCAACCCAGCCACACAGTGCCAGTGATTTaGCTCTGTAATGGATGGACAAAAGCCTGTCTAAACATGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SRQGLPQPSHTVPVI*LCNGWTKACLNMAR Trigger: TCTGGCCATGTTTAGACAGGCTTTTGTCCATCCATTACAGAGCAAAATCACTGGCACTGTGTGGCTGGGTTGAGGGAGCCCCTGCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CAA 90 bp | AATCTGGTAAAGGCTTGGGAGGTGCTTGGCAGACTCACAGTGAAGTaGCCCTCTGGTGGCCAACAGTCCTCACTGACAGACCATGACAGA | + |
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Preference number: 2 (lower is better) Translates to: NLVKAWEVLGRLTVK*PSGGQQSSLTDHDR Trigger: TCTGTCATGGTCTGTCAGTGAGGACTGTTGGCCACCAGAGGGCAACTTCACTGTGAGTCTGCCAAGCACCTCCCAAGCCTTTACCAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR TCA 90 bp | TGGGGTGTGGCCAGCATTGCTTTTATGTGTACTTCAGAGCACAGAATGACGTCTAGGAGCAGCAGGCTGTaGGGTCCCCTCTCAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: WGVASIAFMCTSEHRMTSRSSRL*GPLSSS Trigger: AGAGCTTGAGAGGGGACCTCACAGCCTGCTGCTCCT...AGACGTCATTCTGTGCTCTGAAGTACACATAAAAGCAATGCTGGCCACACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR GCA 90 bp | TGGGGTGTGGCCAGCATTGCTTTTATGTGTACTTCAGAGCACAGAATGACGTCTAGGAACCATGGGCTCTaGCAGTCCCTGGGCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: WGVASIAFMCTSEHRMTSRNHGL*QSLGSF Trigger: GAAGGAGCCCAGGGACTGGCAGAGCCCATGGTTCCT...AGACGTCATTCTGTGCTCTGAAGTACACATAAAAGCAATGCTGGCCACACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCAGGAAGTTTAACTTTTGGGGAGGAGCATGGTTTGACCAGGAAATAGAAATGCACCGACCACAGTaGGGTTCTGGGGTCCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: AARKFNFWGGAWFDQEIEMHRPQ*GSGVPL Trigger: CAAGGGGACCCCAGAACCTCACTGTGGTCGGTGCAT...TTCTATTTCCTGGTCAAACCATGCTCCTCCCCAAAAGTTAAACTTCCTGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR GCA 90 bp | CTCGTGGTGCTCAGAGGAGCAGGGGAGAGCCTTTGCTCTCTCTTCCCACCATTCGGAGCAACCATGGCCTaGTTTGCCATTTGTTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: LVVLRGAGESLCSLFPPFGATMA*FAICFK Trigger: TTTAAAACAAATGGCAAAGCAGGCCATGGTTGCTCC...GAATGGTGGGAAGAGAGAGCAAAGGCTCTCCCCTGCTCCTCTGAGCACCACGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGCCTTTGCTCTCTCTTCCCACCATTCGTGGGTCTCAGAGACTGAATTCACCAAGTGGTTGTTGCTaGTGGAAGGAGTTCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GEPLLSLPTIRGSQRLNSPSGCC*WKEFLG Trigger: CCCCAAGAACTCCTTCCAGCAGCAACAACCACTTGG...TGAATTCAGTCTCTGAGACCCACGAATGGTGGGAAGAGAGAGCAAAGGCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCATTTCAGATGGTGTTTTGAGTCAGTGTCTTACTTATAGTCCAGGTGGGGGCTCTGCCAGTCCCTaGGCTCCTTCAGCACGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SLISDGVLSQCLTYSPGGGSASP*APSARS Trigger: GCTTCGTGCTGAAGGAGCCCAGGGACTGGCAGAGCC...CCCACCTGGACTATAAGTAAGACACTGACTCAAAACACCATCTGAAATGAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCATTACTACAATGTTTCACAACCTGCAGCAGACTCTGGAGAGAATTCTGAAGCTGAGCGCAGCTCCTaGATCCCAGCACCCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CHYYNVSQPAADSGENSEAERSS*IPAPSS Trigger: GCTGCTGGGTGCTGGGATCCAGGAGCTGCGCTCAGC...TTCAGAATTCTCTCCAGAGTCTGCTGCAGGTTGTGAAACATTGTAGTAATGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR CAA 90 bp | GCTCTGCCAGTCCCTGGGCTCCTTCAGCACGAAGCTGCACTCTTCTaGATATGTAGAATGACGCTGAATCTACATAAGTCTACCTCACAA | + |
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Preference number: 2 (lower is better) Translates to: ALPVPGLLQHEAALF*ICRMTLNLHKSTSQ Trigger: TTGTGAGGTAGACTTATGTAGATTCAGCGTCATTCTACATATCAAGAAGAGTGCAGCTTCGTGCTGAAGGAGCCCAGGGACTGGCAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGCCTTTGCTCTCTCTTCCCACCATTCGTGGGTCTCAGAGACTGAATTCAAGCTACGTTCTTGTTTaGCAAGCCCATCTGCTAACT | + |
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Preference number: 2 (lower is better) Translates to: GEPLLSLPTIRGSQRLNSSYVLV*QAHLLT Trigger: AGTTAGCAGATGGGCTTGTCAAACAAGAACGTAGCT...TGAATTCAGTCTCTGAGACCCACGAATGGTGGGAAGAGAGAGCAAAGGCTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGATGGTCTTAGGCAACCCCCATGAAAGGGTCATTCGATCCCCAAGAGGTGGCATCAAGGTACAATaGCACAGGGATACAGACAGT | + |
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Preference number: 2 (lower is better) Translates to: FLMVLGNPHERVIRSPRGGIKVQ*HRDTDS Trigger: ACTGTCTGTATCCCTGTGTCATTGTACCTTGATGCC...ACCTCTTGGGGATCGAATGACCCTTTCATGGGGGTTGCCTAAGACCATCAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCAGGAAGTTTAACTTTTGGGGAGGAGCATGGTTTGACCAGGAAATAGAACACTCCTCCAGAGCTTaGTGCAAGGCTAACAGATCC | + |
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Preference number: 2 (lower is better) Translates to: AARKFNFWGGAWFDQEIEHSSRA*CKANRS Trigger: GGATCTGTTAGCCTTGCAGCAAGCTCTGGAGGAGTG...TTCTATTTCCTGGTCAAACCATGCTCCTCCCCAAAAGTTAAACTTCCTGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR CCA 90 bp | GCGAAACCTGGGACAGCCAGGCTGCCTAGAAATATGGTCAGCTATGTGTGGACGTTGCTCTGTAATGGATaGACAAAAGCCTGTCTAAAC | + |
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Preference number: 2 (lower is better) Translates to: AKPGTARLPRNMVSYVWTLLCNG*TKACLN Trigger: GTTTAGACAGGCTTTTGTCCATCCATTACAGAGCAA...CGTCCACACATAGCTGACCATATTTCTAGGCAGCCTGGCTGTCCCAGGTTTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGATGGTCTTAGGCAACCCCCATGAAAGGGTCATTCGATCCCCAAGAGGTTTAACAAAGGAAGGATaGCGACTGCTCGGAAGATAC | + |
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Preference number: 2 (lower is better) Translates to: FLMVLGNPHERVIRSPRGLTKEG*RLLGRY Trigger: GTATCTTCCGAGCAGTCGGCATCCTTCCTTTGTTAA...ACCTCTTGGGGATCGAATGACCCTTTCATGGGGGTTGCCTAAGACCATCAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR GCA 90 bp | CCTAGAATCCTGATACATGATCAGGCCACAATACATTGCTACCATTATTATCATTGTTGCCAGCTGAGCTaGCATGACCTGGGCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: PRILIHDQATIHCYHYYHCCQLS*HDLGSS Trigger: GGAGCTGCCCAGGTCATGGCAGCTCAGCTGGCAACA...ATGATAATAATGGTAGCAATGTATTGTGGCCTGATCATGTATCAGGATTCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGATGGTCTTAGGCAACCCCCATGAAAGGGTCATTCGATCCCCAAGAGGTAGGAAGTTTAACTTTTaGGGAGGAGCATGGTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: FLMVLGNPHERVIRSPRGRKFNF*GGAWFD Trigger: GTCAAACCATGCTCCTCCCCAAAAGTTAAACTTCCT...ACCTCTTGGGGATCGAATGACCCTTTCATGGGGGTTGCCTAAGACCATCAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTGGCTATTCCCCAAGATCAAATTGAACTGTTGTGAAGATTTGCCATTACTACAGCCTCTCAAGGACTaGAGGCACAGCTGGTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: FWLFPKIKLNCCEDLPLLQPLKD*RHSWWS Trigger: GCTCCACCAGCTGTGCCTCCAGTCCTTGAGAGGCTG...TAGTAATGGCAAATCTTCACAACAGTTCAATTTGATCTTGGGGAATAGCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCAGGAAGTTTAACTTTTGGGGAGGAGCATGGTTTGACCAGGAAATAGAAATCTGTAGCCCAGGCTaGCCTCAAACTCTTTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: AARKFNFWGGAWFDQEIEICSPG*PQTLCN Trigger: ATTACAAAGAGTTTGAGGCCAGCCTGGGCTACAGAT...TTCTATTTCCTGGTCAAACCATGCTCCTCCCCAAAAGTTAAACTTCCTGGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCATTACTACAATGTTTCACAACCTGCAGCAGACTCTGGAGAGAATTCTGAACCACCTCCTTTTCTGTaGGAATACCTGGCTCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: CHYYNVSQPAADSGENSEPPPFL*EYLALL Trigger: CAAGAGAGCCAGGTATTCCCACAGAAAAGGAGGTGG...TTCAGAATTCTCTCCAGAGTCTGCTGCAGGTTGTGAAACATTGTAGTAATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGCTATCAGCCAGCATAACCAGCTACACTACTCACCAACAAAAATCTAAAGAAGTGAGGTCTGTGTaGTCAGGAACCATGGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: KVLSASITSYTTHQQKSKEVRSV*SGTMGS Trigger: AGAGCCCATGGTTCCTGAGCACACAGACCTCACTTC...TTTAGATTTTTGTTGGTGAGTAGTGTAGCTGGTTATGCTGGCTGATAGCACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGCCAGTGATTTTGCTCTGTAATGGATGGACAAAAGCCTGTCTAAACATGTCCTCCAGAGCTTGCTaGAAGGCTAACAGATCCATT | + |
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Preference number: 2 (lower is better) Translates to: TVPVILLCNGWTKACLNMSSRAC*KANRSI Trigger: AATGGATCTGTTAGCCTTGCAGCAAGCTCTGGAGGA...CATGTTTAGACAGGCTTTTGTCCATCCATTACAGAGCAAAATCACTGGCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| 3UTR-3UTR GCA 90 bp | CCTAGAATCCTGATACATGATCAGGCCACAATACATTGCTACCATTATTATCATTGTAGGCAGCAGGGATaGTTTGTGAAGGTGGCCCGT | + |
|
Preference number: 2 (lower is better) Translates to: PRILIHDQATIHCYHYYHCRQQG*FVKVAR Trigger: ACGGGCCACCTTCACAAAGCATCCCTGCTGCCTACA...ATGATAATAATGGTAGCAATGTATTGTGGCCTGATCATGTATCAGGATTCTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCCAGGAAGTTTAACTTTTGGGGAGGAGCATGGTTTGACCAGGAAATAGAACAAGGGCAGGCTGAATaGTTATTAGAACAACAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: AARKFNFWGGAWFDQEIEQGQAE*LLEQQL Trigger: AAGCTGTTGTTCTAATAACCATTCAGCCTGCCCTTG...TTCTATTTCCTGGTCAAACCATGCTCCTCCCCAAAAGTTAAACTTCCTGGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CCA 90 bp | TGCCATTACTACAATGTTTCACAACCTGCAGCAGACTCTGGAGAGAATTCTGAACAGCCTCATTTCAGATaGTGTTTTGAGTCAGTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: CHYYNVSQPAADSGENSEQPHFR*CFESVS Trigger: AGACACTGACTCAAAACACCATCTGAAATGAGGCTG...TTCAGAATTCTCTCCAGAGTCTGCTGCAGGTTGTGAAACATTGTAGTAATGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR TCA 90 bp | CCTAGAATCCTGATACATGATCAGGCCACAATACATTGCTACCATTATTATCATTTGTCATATGTCTGGTaGAAACAGTGGGAGGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: PRILIHDQATIHCYHYYHLSYVW*KQWEEE Trigger: CTCCTCCTCCCACTGTTTTCACCAGACATATGACAA...ATGATAATAATGGTAGCAATGTATTGTGGCCTGATCATGTATCAGGATTCTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR GCA 90 bp | TGCCATTACTACAATGTTTCACAACCTGCAGCAGACTCTGGAGAGAATTCTGAAATAAAAGAGAGCAAATaGCTGGAAGGTCTAACACTC | + |
|
Preference number: 2 (lower is better) Translates to: CHYYNVSQPAADSGENSEIKESK*LEGLTL Trigger: GAGTGTTAGACCTTCCAGGCATTTGCTCTCTTTTAT...TTCAGAATTCTCTCCAGAGTCTGCTGCAGGTTGTGAAACATTGTAGTAATGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CAA 90 bp | AACTTTTGGCTATTCCCCAAGATCAAATTGAACTGTTGTGAAGATTaGCCATTACTACAATGTTTCACAACCTGCAGCAGACTCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: NFWLFPKIKLNCCED*PLLQCFTTCSRLWR Trigger: TCTCCAGAGTCTGCTGCAGGTTGTGAAACATTGTAGTAATGGCAAATCTTCACAACAGTTCAATTTGATCTTGGGGAATAGCCAAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR TCA 90 bp | TTTTGGCTATTCCCCAAGATCAAATTGAACTGTTGTGAAGATTTGCCATTACTACTCACACCTGATGTGTaGCTGCTTTCTCAATCACTA | + |
|
Preference number: 2 (lower is better) Translates to: FWLFPKIKLNCCEDLPLLLTPDV*LLSQSL Trigger: TAGTGATTGAGAAAGCAGTCACACATCAGGTGTGAG...TAGTAATGGCAAATCTTCACAACAGTTCAATTTGATCTTGGGGAATAGCCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR GCA 90 bp | CCTAGAATCCTGATACATGATCAGGCCACAATACATTGCTACCATTATTATCATATAAATGTCACAGCCTaGTGTCTAAAGTGCTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: PRILIHDQATIHCYHYYHINVTA*CLKCYQ Trigger: CTGATAGCACTTTAGACAGCAGGCTGTGACATTTAT...ATGATAATAATGGTAGCAATGTATTGTGGCCTGATCATGTATCAGGATTCTAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTGCTATCAGCCAGCATAACCAGCTACACTACTCACCAACAAAAATCTAAAGGGAAGCACACTTTTTaGTATTGTAATGTTCTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KVLSASITSYTTHQQKSKGKHTF*YCNVLA Trigger: TGCTAGAACATTACAATACCAAAAAGTGTGCTTCCC...TTTAGATTTTTGTTGGTGAGTAGTGTAGCTGGTTATGCTGGCTGATAGCACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR GCA 72 bp | CCTGGGCCTTCCTTGCCTCTCTGTTGCCAGCTGAGCTaGCATGACCTGGGCAGCTCCCCTCTGCCACAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGPSLPLCCQLS*HDLGSSPLPQH Trigger: GTGCTGTGGCAGAGGGGAGCTGCCCAGGTCATGGCAGCTCAGCTGGCAACAGAGAGGCAAGGAAGGCCCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | GAAGGTGGCCCGTGCAAGCCCCCGCCACTCCAGATGTaGGCACATGCACCGACCACAGTGAGGTTCTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: EGGPCKPPPLQM*AHAPTTVRFWG Trigger: ACCCCAGAACCTCACTGTGGTCGGTGCATGTGCCCACATCTGGAGTGGCGGGGGCTTGCACGGGCCACCTTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCGTGGTGCTCAGAGGAGCAGGGGAGAGCCTTTGCTCTCTCTTCCCACCATTCTGCTGGAAGGAGTTCTaGGGGAGCCCGGCTCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LVVLRGAGESLCSLFPPFCWKEF*GSPALW Trigger: CCAGAGAGCCGGGCTCCCCAAGAACTCCTTCCAGCA...GAATGGTGGGAAGAGAGAGCAAAGGCTCTCCCCTGCTCCTCTGAGCACCACGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR GCA 72 bp | GCAAATGTAAATGGCAAGGCGAACCCCAGAGCCTTGTaGACAGCAGGCAGGGGCTCCCTCAACCCAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: ANVNGKANPRAL*TAGRGSLNPAT Trigger: TGTGGCTGGGTTGAGGGAGCCCCTGCCTGCTGTGCACAAGGCTCTGGGGTTCGCCTTGCCATTTACATTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | CTTGTGTCCTCCACAGAACCAAGTGGTTGTTGCTGCTaGAAGGAGTTCTTGGGGAGCCCGGCTCTCTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LVSSTEPSGCCC*KEFLGSPALWG Trigger: GCCCCAGAGAGCCGGGCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACTTGGTTCTGTGGAGGACACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | GCAGCCAATCACAGAAATGAAGCTGAGCGCAGCTCCTaGATCCCAGCACCCAGCAGCCTGTCAGTGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: AANHRNEAERSS*IPAPSSLSVSC Trigger: ACAGCTCACTGACAGGCTGCTGGGTGCTGGGATCCAGGAGCTGCGCTCAGCTTCATTTCTGTGATTGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | TTGGTGAGCCTCAGCAGGACATTGACTCTGCTTCACTaGACAGCCGAGAAGACAGAGCAGTCCGACACGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LVSLSRTLTLLH*TAEKTEQSDTA Trigger: GGCCGTGTCGGACTGCTCTGTCTTCTCGGCTGTCCAGTGAAGCAGAGTCAATGTCCTGCTGAGGCTCACCAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR TCA 72 bp | ATGACCTCTGCTCTGCCCACATGGGCTCAGAGGCTCTaGACGTTAAGGACAGACCGGATCCCACCTCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: MTSALPTWAQRL*TLRTDRIPPLC Trigger: GCAAAGAGGTGGGATCCGGTCTGTCCTTAACGTTCAGAGCCTCTGAGCCCATGTGGGCAGAGCAGAGGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR GCA 72 bp | AGTTCTCCGGTGGAGCGAAACCTGGGACAGCCAGGCTaGCTAGAAATATGGTCAGCTATGTGTGGACGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: SSPVERNLGQPG*LEIWSAMCGRR Trigger: ACGGCGTCCACACATAGCTGACCATATTTCTAGGCAGCCTGGCTGTCCCAGGTTTCGCTCCACCGGAGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR GCA 72 bp | TGTCTTGTGTCCTCCACAGAACCAAGTGGTTGTTGCTaGTGGAAGGAGTTCTTGGGGAGCCCGGCTCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CLVSSTEPSGCC*WKEFLGSPALW Trigger: CCAGAGAGCCGGGCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACTTGGTTCTGTGGAGGACACAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR GCA 72 bp | CGATCCCCAAGAGGTCACAACCCACAGGTTGAGACCTaGTGGTCTGGACAGACACCTACACCATGGCTACAC | + |
|
Preference number: 3 (lower is better) Translates to: RSPRGHNPQVET*WSGQTPTPWLH Trigger: GTGTAGCCATGGTGTAGGTGTCTGTCCAGACCAGCAGGTCTCAACCTGTGGGTTGTGACCTCTTGGGGATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | TCCCTGCTGCAGCCTCTCAAGGACTGGAGGCACAGCTaGTGGAGCAACCATGGCCTGCTTTGCCATTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLLQPLKDWRHS*WSNHGLLCHLF Trigger: AAACAAATGGCAAAGCAGGCCATGGTTGCTCCACCAGCTGTGCCTCCAGTCCTTGAGAGGCTGCAGCAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | CTCTTTGTAATCTCCCTGCTGCAGCCTCTCAAGGACTaGAGGCACAGCTGGTGGAGCAACCATGGCCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LFVISLLQPLKD*RHSWWSNHGLL Trigger: AAGCAGGCCATGGTTGCTCCACCAGCTGTGCCTCCAGTCCTTGAGAGGCTGCAGCAGGGAGATTACAAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | CAGAACCAAGTGGTTGTTGCTGCTGGAAGGAGTTCTTaGGGAGCCCGGCTCTCTGGGGCACTTCATGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QNQVVVAAGRSS*GARLSGALHVY Trigger: GTAGACATGAAGTGCCCCAGAGAGCCGGGCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACTTGGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | CAGGGGAGAGCCTTTGCTCTCTCTTCCCACCATTCGTaGGTCTCAGAGACTGAATTCAGGCTGTCAGGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: QGRAFALSSHHS*VSETEFRLSGS Trigger: CGAGCCTGACAGCCTGAATTCAGTCTCTGAGACCCACGAATGGTGGGAAGAGAGAGCAAAGGCTCTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCGAACCCCAGAGCCTTGTGCACAGCAGGCAGGGGCTCCCTCAACCCAGCCTTTAAACGAGAACTTTaGACTGGGAAGATCACGTTC | + |
|
Preference number: 3 (lower is better) Translates to: KANPRALCTAGRGSLNPAFKREL*TGKITF Trigger: GAACGTGATCTTCCCAGTCAAAAGTTCTCGTTTAAA...GGCTGGGTTGAGGGAGCCCCTGCCTGCTGTGCACAAGGCTCTGGGGTTCGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR TCA 72 bp | GGTCATTCGATCCCCAAGAGGTCACAACCCACAGGTTaGGACCTGCTGGTCTGGACAGACACCTACACCATG | + |
|
Preference number: 3 (lower is better) Translates to: GHSIPKRSQPTG*DLLVWTDTYTM Trigger: CATGGTGTAGGTGTCTGTCCAGACCAGCAGGTCTCAACCTGTGGGTTGTGACCTCTTGGGGATCGAATGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR TCA 72 bp | TGCTCTCTCTTCCCACCATTCGTGGGTCTCAGAGACTaGATTCAGGCTGTCAGGCTCGGCAGCAACCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: CSLFPPFVGLRD*IQAVRLGSNLM Trigger: CATGAGGTTGCTGCCGAGCCTGACAGCCTGAATTCAGTCTCTGAGACCCACGAATGGTGGGAAGAGAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | GAGCGAAACCTGGGACAGCCAGGCTGCCTAGAAATATaGTCAGCTATGTGTGGACGCCGTGTGATAGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ERNLGQPGCLEI*SAMCGRRVIGA Trigger: TGCTCCTATCACACGGCGTCCACACATAGCTGACCATATTTCTAGGCAGCCTGGCTGTCCCAGGTTTCGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | TCCCCAAGAGGTCACAACCCACAGGTTGAGACCTGCTaGTCTGGACAGACACCTACACCATGGCTACACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SPRGHNPQVETC*SGQTPTPWLHS Trigger: AGAGTGTAGCCATGGTGTAGGTGTCTGTCCAGACCAGCAGGTCTCAACCTGTGGGTTGTGACCTCTTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR TCA 72 bp | CTATTCCAGTCTGCTGTCAGGAATCACTTCACAGGATaGCCTCTGCTCTGCCCACATGGGCTCAGAGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LFQSAVRNHFTG*PLLCPHGLRGS Trigger: AGAGCCTCTGAGCCCATGTGGGCAGAGCAGAGGTCATCCTGTGAAGTGATTCCTGACAGCAGACTGGAATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR GCA 72 bp | AGTCTGCTGTCAGGAATCACTTCACAGGATGACCTCTaGTCTGCCCACATGGGCTCAGAGGCTCTGAACGTT | + |
|
Preference number: 3 (lower is better) Translates to: SLLSGITSQDDL*SAHMGSEALNV Trigger: AACGTTCAGAGCCTCTGAGCCCATGTGGGCAGAGCAGAGGTCATCCTGTGAAGTGATTCCTGACAGCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | CTGTCAGGCTCGGCAGCAACCTCATGGGTAACATCCTaGGTGCCTGGTCCGTCTTTTAATAAGTCTAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: LSGSAATSWVTS*VPGPSFNKSRP Trigger: TGGTCTAGACTTATTAAAAGACGGACCAGGCACCCAGGATGTTACCCATGAGGTTGCTGCCGAGCCTGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | ACTGAATTCAGGCTGTCAGGCTCGGCAGCAACCTCATaGGTAACATCCTGGGTGCCTGGTCCGTCTTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: TEFRLSGSAATS*VTSWVPGPSFN Trigger: ATTAAAAGACGGACCAGGCACCCAGGATGTTACCCATGAGGTTGCTGCCGAGCCTGACAGCCTGAATTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | CGTTTTGGTACACGGACAGCAATTAGCAAATGTAAATaGCAAGGCGAACCCCAGAGCCTTGTGCACAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RFGTRTAISKCK*QGEPQSLVHSR Trigger: CCTGCTGTGCACAAGGCTCTGGGGTTCGCCTTGCCATTTACATTTGCTAATTGCTGTCCGTGTACCAAAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTGATGGTCTTAGGCAACCCCCATGAAAGGGTCATTCGATCCCCAAGAGGTTGGAGTAGGACTCTGTaGAGGAGAGTTACGTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLMVLGNPHERVIRSPRGWSRTL*RRVTYW Trigger: CCAGTACGTAACTCTCCTCAACAGAGTCCTACTCCA...ACCTCTTGGGGATCGAATGACCCTTTCATGGGGGTTGCCTAAGACCATCAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR GCA 72 bp | GAGACACAAGTTCTGGCTGTGGGGTGTGGCCAGCATTaGTTTTATGTGTACTTCAGAGCACAGAATGACGTC | + |
|
Preference number: 3 (lower is better) Translates to: ETQVLAVGCGQH*FYVYFRAQNDV Trigger: GACGTCATTCTGTGCTCTGAAGTACACATAAAAGCAATGCTGGCCACACCCCACAGCCAGAACTTGTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | GGTGCTTGGGACTTTATCAACCCACCTCCTTTTCTGTaGGAATACCTGGCTCTCTTGCCTAGAAAGGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GAWDFINPPPFL*EYLALLPRKGV Trigger: TACACCCTTTCTAGGCAAGAGAGCCAGGTATTCCCACAGAAAAGGAGGTGGGTTGATAAAGTCCCAAGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | AGAACTCGTGGTTCTGAGATGGTTAGACCAGGGAGATaGCAAGCAGCCAGGAAGTTTAACTTTTGGGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RTRGSEMVRPGR*QAARKFNFWGG Trigger: TCCTCCCCAAAAGTTAAACTTCCTGGCTGCTTGCCATCTCCCTGGTCTAACCATCTCAGAACCACGAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAGCCTTTGCTCTCTCTTCCCACCATTCGTGGGTCTCAGAGACTGAATTCAGTAGGACACAGGGTTTaGGCCTTTTACAAAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: GEPLLSLPTIRGSQRLNSVGHRV*AFYKET Trigger: GGTTTCTTTGTAAAAGGCCAAAACCCTGTGTCCTAC...TGAATTCAGTCTCTGAGACCCACGAATGGTGGGAAGAGAGAGCAAAGGCTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGTGTGGCCAGCATTGCTTTTATGTGTACTTCAGAGCACAGAATGACGTCTCACAGAACCAAGTGGTaGTTGCTGCTGGAAGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: WGVASIAFMCTSEHRMTSHRTKW*LLLEGV Trigger: AACTCCTTCCAGCAGCAACAACCACTTGGTTCTGTG...AGACGTCATTCTGTGCTCTGAAGTACACATAAAAGCAATGCTGGCCACACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR TCA 72 bp | CGTTCCCACAGTTCTTGCATTAGCTACGTTCTTGTTTaGCAAGCCCATCTGCTAACTTCTGAGAGGTCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSHSSCISYVLV*QAHLLTSERSA Trigger: TGCCGACCTCTCAGAAGTTAGCAGATGGGCTTGTCAAACAAGAACGTAGCTAATGCAAGAACTGTGGGAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR GCA 72 bp | AGGACTGGAGGCACAGCTGGTGGAGCAACCATGGCCTaGTTTGCCATTTGTTTTAAACGAGAACTTTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: RTGGTAGGATMA*FAICFKRELLT Trigger: AGTCAAAAGTTCTCGTTTAAAACAAATGGCAAAGCAGGCCATGGTTGCTCCACCAGCTGTGCCTCCAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | TCTCAAGGACTGGAGGCACAGCTGGTGGAGCAACCATaGCCTGCTTTGCCATTTGTTTTAAACGAGAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: SQGLEAQLVEQP*PALPFVLNENF Trigger: AAAGTTCTCGTTTAAAACAAATGGCAAAGCAGGCCATGGTTGCTCCACCAGCTGTGCCTCCAGTCCTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | AAAGTGGCGTCTGAACAAAGAGAGAGACACAAGTTCTaGCTGTGGGGTGTGGCCAGCATTGCTTTTATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KVASEQRERHKF*LWGVASIAFMC Trigger: ACACATAAAAGCAATGCTGGCCACACCCCACAGCCAGAACTTGTGTCTCTCTCTTTGTTCAGACGCCACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTGATGGTCTTAGGCAACCCCCATGAAAGGGTCATTCGATCCCCAAGAGGTACAGTGCCAGTGATTTaGCTCTGTAATGGATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: FLMVLGNPHERVIRSPRGTVPVI*LCNGWT Trigger: TGTCCATCCATTACAGAGCAAAATCACTGGCACTGT...ACCTCTTGGGGATCGAATGACCCTTTCATGGGGGTTGCCTAAGACCATCAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR GCA 72 bp | GCATTTGCTCATCCCAGGACTGGTATTTTAAGACTGTaGCAGGCTATTAACAAAGGAAGGATGCCGACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: AFAHPRTGILRL*QAINKGRMPTA Trigger: AGCAGTCGGCATCCTTCCTTTGTTAATAGCCTGGCACAGTCTTAAAATACCAGTCCTGGGATGAGCAAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | AACAAAGAGAGAGACACAAGTTCTGGCTGTGGGGTGTaGCCAGCATTGCTTTTATGTGTACTTCAGAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: NKERDTSSGCGV*PALLLCVLQST Trigger: TGTGCTCTGAAGTACACATAAAAGCAATGCTGGCCACACCCCACAGCCAGAACTTGTGTCTCTCTCTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCCAGGAAGTTTAACTTTTGGGGAGGAGCATGGTTTGACCAGGAAATAGAACAACCATGGCCTGCTTaGCCATTTGTTTTAAACGAG | + |
|
Preference number: 3 (lower is better) Translates to: AARKFNFWGGAWFDQEIEQPWPA*PFVLNE Trigger: CTCGTTTAAAACAAATGGCAAAGCAGGCCATGGTTG...TTCTATTTCCTGGTCAAACCATGCTCCTCCCCAAAAGTTAAACTTCCTGGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR TCA 72 bp | AGACCGGATCCCACCTCTTTGCTCACACCTGATGTGTaGCTGCTTTCTCAATCACTAAACTCAGTATTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RPDPTSLLTPDV*LLSQSLNSVFA Trigger: AGCAAATACTGAGTTTAGTGATTGAGAAAGCAGTCACACATCAGGTGTGAGCAAAGAGGTGGGATCCGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | GGGTGCCTGGTCCGTCTTTTAATAAGTCTAGACCAGTaGTCCTCAATCTCCCTAATGCTGCAATCCTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: GCLVRLLISLDQ*SSISLMLQSFN Trigger: ATTAAAGGATTGCAGCATTAGGGAGATTGAGGACCACTGGTCTAGACTTATTAAAAGACGGACCAGGCACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGTGTGGCCAGCATTGCTTTTATGTGTACTTCAGAGCACAGAATGACGTCTACAGTATTTCAAAAGTaGGTAGGACACAGGGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: WGVASIAFMCTSEHRMTSTVFQK*VGHRVL Trigger: CAAAACCCTGTGTCCTACCAACTTTTGAAATACTGT...AGACGTCATTCTGTGCTCTGAAGTACACATAAAAGCAATGCTGGCCACACCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTCATTTCAGATGGTGTTTTGAGTCAGTGTCTTACTTATAGTCCAGGTGGGGAAGCTGCACTCTTCTaGATATGTAGAATGACGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLISDGVLSQCLTYSPGGEAALF*ICRMTL Trigger: CAGCGTCATTCTACATATCAAGAAGAGTGCAGCTTC...CCCACCTGGACTATAAGTAAGACACTGACTCAAAACACCATCTGAAATGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CAA 90 bp | TGCCATTACTACAATGTTTCACAACCTGCAGCAGACTCTGGAGAGAATTCTGAAACATGGCCAGAGGATTaGTCTTTTGTTCAGTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CHYYNVSQPAADSGENSETWPED*SFVQCL Trigger: CAGGCACTGAACAAAAGACAAATCCTCTGGCCATGT...TTCAGAATTCTCTCCAGAGTCTGCTGCAGGTTGTGAAACATTGTAGTAATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CCA 72 bp | CAAGCAGCCAGGAAGTTTAACTTTTGGGGAGGAGCATaGTTTGACCAGGAAATAGAAAGGAGACATAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: QAARKFNFWGGA*FDQEIERRHRI Trigger: TATTCTATGTCTCCTTTCTATTTCCTGGTCAAACCATGCTCCTCCCCAAAAGTTAAACTTCCTGGCTGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGAATCCTGATACATGATCAGGCCACAATACATTGCTACCATTATTATCATAGAACCAAGTGGTTGTaGCTGCTGGAAGGAGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PRILIHDQATIHCYHYYHRTKWL*LLEGVL Trigger: AAGAACTCCTTCCAGCAGCAACAACCACTTGGTTCT...ATGATAATAATGGTAGCAATGTATTGTGGCCTGATCATGTATCAGGATTCTAGG 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR TCA 72 bp | ATGCATTTTCAAGAAATTAGACATTGTCTGGAACACTaGCCAAGGGTAGCAGTGATCAAGGTCATTGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: MHFQEIRHCLEH*PRVAVIKVIGK Trigger: CTTTCCAATGACCTTGATCACTGCTACCCTTGGTCAGTGTTCCAGACAATGTCTAATTTCTTGAAAATGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTGCTATCAGCCAGCATAACCAGCTACACTACTCACCAACAAAAATCTAAATTCCCCAAGATCAAATaGAACTGTTGTGAAGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: KVLSASITSYTTHQQKSKFPKIK*NCCEDL Trigger: CAAATCTTCACAACAGTTCAATTTGATCTTGGGGAA...TTTAGATTTTTGTTGGTGAGTAGTGTAGCTGGTTATGCTGGCTGATAGCACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR TCA 72 bp | CTTTTGGCTATTCCCCAAGATCAAATTGAACTGTTGTaGAGATTTGCCATTACTACAATGTTTCACAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLAIPQDQIELL*RFAITTMFHNL Trigger: CAGGTTGTGAAACATTGTAGTAATGGCAAATCTTCACAACAGTTCAATTTGATCTTGGGGAATAGCCAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR CCA 90 bp | GCGAAACCTGGGACAGCCAGGCTGCCTAGAAATATGGTCAGCTATGTGTGGACGACACCTGGGCCACGCTaGCTAAAGTGGCTTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKPGTARLPRNMVSYVWTTPGPR*LKWLER Trigger: CCTCTCAAGCCACTTTAGCCAGCGTGGCCCAGGTGT...CGTCCACACATAGCTGACCATATTTCTAGGCAGCCTGGCTGTCCCAGGTTTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CAA 72 bp | AAGGCTTGGGAGGTGCTTGGCAGACTCACAGTGAAGTaGCCCTCTGGTGGCCAACAGTCCTCACTGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KAWEVLGRLTVK*PSGGQQSSLTD Trigger: GTCTGTCAGTGAGGACTGTTGGCCACCAGAGGGCAACTTCACTGTGAGTCTGCCAAGCACCTCCCAAGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTCTGCCCACATGGGCTCAGAGGCTCTGAACGTTAAGGACAGACCGGATCTGGCTAAAGTGGCTTaGGAGGCATCCGAGGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LCSAHMGSEALNVKDRPDLAKVA*EASEVL Trigger: TAGAACCTCGGATGCCTCTCAAGCCACTTTAGCCAG...ATCCGGTCTGTCCTTAACGTTCAGAGCCTCTGAGCCCATGTGGGCAGAGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CAA 72 bp | ACAGAACCAAGTGGTTGTTGCTGCTGGAAGGAGTTCTaGGGGAGCCCGGCTCTCTGGGGCACTTCATGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TEPSGCCCWKEF*GSPALWGTSCL Trigger: TAGACATGAAGTGCCCCAGAGAGCCGGGCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACTTGGTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CAA 72 bp | GGGTCATTCGATCCCCAAGAGGTCACAACCCACAGGTaGAGACCTGCTGGTCTGGACAGACACCTACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSFDPQEVTTHR*RPAGLDRHLHH Trigger: ATGGTGTAGGTGTCTGTCCAGACCAGCAGGTCTCAACCTGTGGGTTGTGACCTCTTGGGGATCGAATGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR CCA 90 bp | GGAGAGCCTTTGCTCTCTCTTCCCACCATTCGTGGGTCTCAGAGACTGAATTCATCCATCTCCTCTGCGTaGTCGATCCCAGTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GEPLLSLPTIRGSQRLNSSISSA*SIPVLL Trigger: GAGCAGCACTGGGATCGACCACGCAGAGGAGATGGA...TGAATTCAGTCTCTGAGACCCACGAATGGTGGGAAGAGAGAGCAAAGGCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR TCA 90 bp | CTCCTGGATCCCAGCACCCAGCAGCCTGTCAGTGAGCTGTTTAGCCTATTCCAGCATCAGACCAAAGAGTaGAAGGGAGAAGGTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLDPSTQQPVSELFSLFQHQTKE*KGEGSH Trigger: ATGGGAACCTTCTCCCTTTCACTCTTTGGTCTGATG...CTGGAATAGGCTAAACAGCTCACTGACAGGCTGCTGGGTGCTGGGATCCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCCAGTGATTTTGCTCTGTAATGGATGGACAAAAGCCTGTCTAAACATGCCGGAGCACATCACCTaGAGCGCGGGCTGTGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TVPVILLCNGWTKACLNMPEHIT*SAGCAR Trigger: TCGAGCACAGCCCGCGCTGCAGGTGATGTGCTCCGG...CATGTTTAGACAGGCTTTTGTCCATCCATTACAGAGCAAAATCACTGGCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR GCA 90 bp | GCGAAACCTGGGACAGCCAGGCTGCCTAGAAATATGGTCAGCTATGTGTGGACGCCAGTACTGCAGGAGTaGTTCAATAGCTCTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: AKPGTARLPRNMVSYVWTPVLQE*FNSSEL Trigger: GAGTTCAGAGCTATTGAAGCACTCCTGCAGTACTGG...CGTCCACACATAGCTGACCATATTTCTAGGCAGCCTGGCTGTCCCAGGTTTCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR CCA 90 bp | ACGAGAACTTTTGACTGGGAAGATCACGTTCCCACAGTTCTTGCATTAGCTACGCCACGCTGGCTAAAGTaGCTTGAGAGGCATCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRTFDWEDHVPTVLALATPRWLK*LERHPR Trigger: CCTCGGATGCCTCTCAAGCCACTTTAGCCAGCGTGG...CGTAGCTAATGCAAGAACTGTGGGAACGTGATCTTCCCAGTCAAAAGTTCTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CAA 72 bp | GGGCTCCCTCAACCCAGCCACACAGTGCCAGTGATTTaGCTCTGTAATGGATGGACAAAAGCCTGTCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLPQPSHTVPVI*LCNGWTKACLN Trigger: GTTTAGACAGGCTTTTGTCCATCCATTACAGAGCAAAATCACTGGCACTGTGTGGCTGGGTTGAGGGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CAA 72 bp | TGCTTCATGGTGGGAATGTCACTAGTGCTGTCTGTCTaGTGTCCTCCACAGAACCAAGTGGTTGTTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFMVGMSLVLSV*CPPQNQVVVAA Trigger: AGCAGCAACAACCACTTGGTTCTGTGGAGGACACAAGACAGACAGCACTAGTGACATTCCCACCATGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR TCA 90 bp | GCAGCCAGGAAGTTTAACTTTTGGGGAGGAGCATGGTTTGACCAGGAAATAGAAATGCTCATCACGTGCTaGAACCTCAAGTCTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AARKFNFWGGAWFDQEIEMLITC*NLKSLA Trigger: GGCCAGAGACTTGAGGTTTCAGCACGTGATGAGCAT...TTCTATTTCCTGGTCAAACCATGCTCCTCCCCAAAAGTTAAACTTCCTGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR CCA 90 bp | TTTCTGATGGTCTTAGGCAACCCCCATGAAAGGGTCATTCGATCCCCAAGAGGTCTCAAGTCTCTGGCCTaGAGTGCTAACTCATGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FLMVLGNPHERVIRSPRGLKSLA*SANSWY Trigger: ATACCATGAGTTAGCACTCCAGGCCAGAGACTTGAG...ACCTCTTGGGGATCGAATGACCCTTTCATGGGGGTTGCCTAAGACCATCAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR TCA 90 bp | AGCCTCATTTCAGATGGTGTTTTGAGTCAGTGTCTTACTTATAGTCCAGGTGGGCTGTCTTCCAAGGAATaGGAGCAACCTCCTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLISDGVLSQCLTYSPGGLSSKE*EQPPPD Trigger: ATCTGGAGGAGGTTGCTCTCATTCCTTGGAAGACAG...CCCACCTGGACTATAAGTAAGACACTGACTCAAAACACCATCTGAAATGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR GCA 90 bp | TGGGGTGTGGCCAGCATTGCTTTTATGTGTACTTCAGAGCACAGAATGACGTCTTTTTGGAGTAGGACATaGAGCTTGCTTCTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: WGVASIAFMCTSEHRMTSFWSRT*SLLLST Trigger: TGTGGACAGAAGCAAGCTGCATGTCCTACTCCAAAA...AGACGTCATTCTGTGCTCTGAAGTACACATAAAAGCAATGCTGGCCACACCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR CCA 90 bp | TTTCTGATGGTCTTAGGCAACCCCCATGAAAGGGTCATTCGATCCCCAAGAGGTATCATCACATTGCGATaGCTGTCTAGGTTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLMVLGNPHERVIRSPRGIITLR*LSRLMK Trigger: CTTCATCAACCTAGACAGCCATCGCAATGTGATGAT...ACCTCTTGGGGATCGAATGACCCTTTCATGGGGGTTGCCTAAGACCATCAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CAA 72 bp | GTCCCTGGGCTCCTTCAGCACGAAGCTGCACTCTTCTaGATATGTAGAATGACGCTGAATCTACATAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPGLLQHEAALF*ICRMTLNLHKS Trigger: AGACTTATGTAGATTCAGCGTCATTCTACATATCAAGAAGAGTGCAGCTTCGTGCTGAAGGAGCCCAGGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR GCA 90 bp | CCTAGAATCCTGATACATGATCAGGCCACAATACATTGCTACCATTATTATCATTCGAGGATCAGTGGCTaGAGGACGCTTAGTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRILIHDQATIHCYHYYHSRISG*RTLSLP Trigger: GGGGAGACTAAGCGTCCTGCAGCCACTGATCCTCGA...ATGATAATAATGGTAGCAATGTATTGTGGCCTGATCATGTATCAGGATTCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CAA 72 bp | CAGCTTAGACCAAAGCATAAAACGCAGCTAAGACCTTaGGCATCAAGGTACAATGACACAGGGATACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QLRPKHKTQLRP*ASRYNDTGIQT Trigger: TGTCTGTATCCCTGTGTCATTGTACCTTGATGCCAAAGGTCTTAGCTGCGTTTTATGCTTTGGTCTAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CAA 72 bp | ATGGCCTGCTTTGCCATTTGTTTTAAACGAGAACTTTaGACTGGGAAGATCACGTTCCCACAGTTCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MACFAICFKREL*TGKITFPQFLH Trigger: ATGCAAGAACTGTGGGAACGTGATCTTCCCAGTCAAAAGTTCTCGTTTAAAACAAATGGCAAAGCAGGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR GCA 90 bp | TTTTGGCTATTCCCCAAGATCAAATTGAACTGTTGTGAAGATTTGCCATTACTAGTGCTGATCCAGTACTaGAGGAGTGCTTCAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FWLFPKIKLNCCEDLPLLVLIQY*RSASIA Trigger: AGCTATTGAAGCACTCCTGCAGTACTGGATCAGCAC...TAGTAATGGCAAATCTTCACAACAGTTCAATTTGATCTTGGGGAATAGCCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR CCA 90 bp | TTTTGGCTATTCCCCAAGATCAAATTGAACTGTTGTGAAGATTTGCCATTACTAGAAACCTCAAGTCTCTaGCCTGGAGTGCTAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FWLFPKIKLNCCEDLPLLETSSL*PGVLTH Trigger: ATGAGTTAGCACTCCAGGCCAGAGACTTGAGGTTTC...TAGTAATGGCAAATCTTCACAACAGTTCAATTTGATCTTGGGGAATAGCCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| 3UTR CAA 72 bp | CTATTCCCCAAGATCAAATTGAACTGTTGTGAAGATTaGCCATTACTACAATGTTTCACAACCTGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFPKIKLNCCED*PLLQCFTTCSR Trigger: TCTGCTGCAGGTTGTGAAACATTGTAGTAATGGCAAATCTTCACAACAGTTCAATTTGATCTTGGGGAATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS GCA 90 bp | AGTTCTCCAGCAGCAGCTCCATCTCCTCTGCGTGGTCGATCCCAGTaGTGCTCTTCTCAAAGACATGTGGGTCGCTCCACTTGGTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPAAAPSPLRGRSQ*CSSQRHVGRSTWSD Trigger: GTCTGACCAAGTGGAGCGACCCACATGTCTTTGAGAAGAGCAGCACTGGGATCGACCACGCAGAGGAGATGGAGCTGCTGCTGGAGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS TCA 90 bp | AACTTTGTCACAGCAAACACCTGGGCCACGCTGGCTAAAGTGGCTTaGGAGGCATCCGAGGTTCTAAACCGGAGCACATCACCTGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: NFVTANTWATLAKVA*EASEVLNRSTSPAA Trigger: CGCTGCAGGTGATGTGCTCCGGTTTAGAACCTCGGATGCCTCTCAAGCCACTTTAGCCAGCGTGGCCCAGGTGTTTGCTGTGACAAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS CCA 90 bp | CTCCTCTGCGTGGTCGATCCCAGTGCTGCTCTTCTCAAAGACATGTaGGTCGCTCCACTTGGTCAGACAGAGTTCTTCCAGCATCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLCVVDPSAALLKDM*VAPLGQTEFFQHLL Trigger: GAGGAGATGCTGGAAGAACTCTGTCTGACCAAGTGGAGCGACCCACATGTCTTTGAGAAGAGCAGCACTGGGATCGACCACGCAGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR CAA 90 bp | AGTGTGGGTCCCTCCCTGCGCGAGGAAGTGAGGTCTGTGTGCTCAGGAACCATGCGATGGCTGTCTAGGTaGATGAAGATAATGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVGPSLREEVRSVCSGTMRWLSR*MKIMLC Trigger: GCAGAGCATTATCTTCATCAACCTAGACAGCCATCG...CATGGTTCCTGAGCACACAGACCTCACTTCCTCGCGCAGGGAGGGACCCACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS GCA 90 bp | ATCATCACATTGCGATGGCTGTCTAGGTTGATGAAGATAATGCTCTaGGAATCGTCAATCAGGACCCGAAGCTCGCGCGCCTCGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IITLRWLSRLMKIML*ESSIRTRSSRASLE Trigger: CTCCAACGAGGCGCGCGAGCTTCGGGTCCTGATTGACGATTCGCAGAGCATTATCTTCATCAACCTAGACAGCCATCGCAATGTGATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR CAA 90 bp | GCGAAACCTGGGACAGCCAGGCTGCCTAGAAATATGGTCAGCTATGTGTGGACGCTTCTTTGTCAAACTTaGTCACAGCAAACACCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AKPGTARLPRNMVSYVWTLLCQT*SQQTPG Trigger: CCCAGGTGTTTGCTGTGACAAAGTTTGACAAAGAAG...CGTCCACACATAGCTGACCATATTTCTAGGCAGCCTGGCTGTCCCAGGTTTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR CAA 90 bp | ACGAGAACTTTTGACTGGGAAGATCACGTTCCCACAGTTCTTGCATTAGCTACGAACCTCATCATCACATaGCGATGGCTGTCTAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TRTFDWEDHVPTVLALATNLIIT*RWLSRL Trigger: CAACCTAGACAGCCATCGCAATGTGATGATGAGGTT...CGTAGCTAATGCAAGAACTGTGGGAACGTGATCTTCCCAGTCAAAAGTTCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS TCA 90 bp | CTCATGATGATCCTGTTGTTTCTAGTAGTGATGCTCATCACGTGCTaGAACCTCAAGTCTCTGGCCTGGAGTGCTAACTCATGGTATAGT | + |
|
Preference number: 5 (lower is better) Translates to: LMMILLFLVVMLITC*NLKSLAWSANSWYS Trigger: ACTATACCATGAGTTAGCACTCCAGGCCAGAGACTTGAGGTTTCAGCACGTGATGAGCATCACTACTAGAAACAACAGGATCATCATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGTGGCCAGCATTGCTTTTATGTGTACTTCAGAGCACAGAATGACGTCTCTCATGATGATCCTGTaGTTTCTAGTAGTGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WGVASIAFMCTSEHRMTSLMMIL*FLVVML Trigger: GAGCATCACTACTAGAAACAACAGGATCATCATGAG...AGACGTCATTCTGTGCTCTGAAGTACACATAAAAGCAATGCTGGCCACACCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS-3UTR CAA 90 bp | CCTAGAATCCTGATACATGATCAGGCCACAATACATTGCTACCATTATTATCATAGTAGGACATGCAGCTaGCTTCTGTCCACAGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: PRILIHDQATIHCYHYYHSRTCS*LLSTDE Trigger: CTCGTCTGTGGACAGAAGCAAGCTGCATGTCCTACT...ATGATAATAATGGTAGCAATGTATTGTGGCCTGATCATGTATCAGGATTCTAGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS GCA 72 bp | AGAGGCATCCGAGGTTCTAAACCGGAGCACATCACCTaGAGCGCGGGCTGTGCTCGACGCTTTCGGGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RGIRGSKPEHIT*SAGCARRFRAP Trigger: CGGAGCCCGAAAGCGTCGAGCACAGCCCGCGCTGCAGGTGATGTGCTCCGGTTTAGAACCTCGGATGCCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS GCA 72 bp | GCAGCTCCATCTCCTCTGCGTGGTCGATCCCAGTGCTaGTCTTCTCAAAGACATGTGGGTCGCTCCACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AAPSPLRGRSQC*SSQRHVGRSTW Trigger: CCAAGTGGAGCGACCCACATGTCTTTGAGAAGAGCAGCACTGGGATCGACCACGCAGAGGAGATGGAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS GCA 72 bp | GCAGCAGCTCCATCTCCTCTGCGTGGTCGATCCCAGTaGTGCTCTTCTCAAAGACATGTGGGTCGCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: AAAPSPLRGRSQ*CSSQRHVGRST Trigger: AGTGGAGCGACCCACATGTCTTTGAGAAGAGCAGCACTGGGATCGACCACGCAGAGGAGATGGAGCTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS TCA 72 bp | ACAGCAAACACCTGGGCCACGCTGGCTAAAGTGGCTTaGGAGGCATCCGAGGTTCTAAACCGGAGCACATCA | + |
|
Preference number: 6 (lower is better) Translates to: TANTWATLAKVA*EASEVLNRSTS Trigger: TGATGTGCTCCGGTTTAGAACCTCGGATGCCTCTCAAGCCACTTTAGCCAGCGTGGCCCAGGTGTTTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS GCA 72 bp | TTGCGATGGCTGTCTAGGTTGATGAAGATAATGCTCTaGGAATCGTCAATCAGGACCCGAAGCTCGCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRWLSRLMKIML*ESSIRTRSSRA Trigger: GGCGCGCGAGCTTCGGGTCCTGATTGACGATTCGCAGAGCATTATCTTCATCAACCTAGACAGCCATCGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
||
| CDS CAA 72 bp | GTGCTGCTCTTCTCAAAGACATGTGGGTCGCTCCACTaGGTCAGACAGAGTTCTTCCAGCATCTCCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: VLLFSKTCGSLH*VRQSSSSISSS Trigger: TGAGGAGGAGATGCTGGAAGAACTCTGTCTGACCAAGTGGAGCGACCCACATGTCTTTGAGAAGAGCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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| CDS TCA 72 bp | ATCCTGTTGTTTCTAGTAGTGATGCTCATCACGTGCTaGAACCTCAAGTCTCTGGCCTGGAGTGCTAACTCA | + |
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Preference number: 6 (lower is better) Translates to: ILLFLVVMLITC*NLKSLAWSANS Trigger: TGAGTTAGCACTCCAGGCCAGAGACTTGAGGTTTCAGCACGTGATGAGCATCACTACTAGAAACAACAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021772.4 |
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