Pregenerated sensors for MRPS9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060679Ensembl transcript IDs: ENSMUST00000057208.13, ENSMUST00000201108.4
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTCACGTGGATCTTCCCGCTTCCGTGCTCATAAACGACCGCCTGTaGCGTGGCGCTCTTCCTCCGGCCTGCAGGGATGGGAAAGCCCGC | + |
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Preference number: 1 (lower is better) Translates to: VHVDLPASVLINDRL*RGALPPACRDGKAR Trigger: GCGGGCTTTCCCATCCCTGCAGGCCGGAGGAAGAGCGCCACGGCACAGGCGGTCGTTTATGAGCACGGAAGCGGGAAGATCCACGTGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR GCA 90 bp | AGCGTATGGCGCCTGCCTGCGCTGACCTCCCTCCCCCGGAGACTGTaGAGGTCACATCGTGTCTCTCCAGCCGGTCCAGGAAGTGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: SVWRLPALTSLPRRL*RSHRVSPAGPGSGK Trigger: CTTTCCACTTCCTGGACCGGCTGGAGAGACACGATGTGACCTGCACAGTCTCCGGGGGAGGGAGGTCAGCGCAGGCAGGCGCCATACGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR CCA 90 bp | AAACGACCGCCTGTGCCGTGGCGCTCTTCCTCCGGCCTGCAGGGATaGGAAAGCCCGCCAGTGAGTTCAGGACCGAGCTTCCCAGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: KRPPVPWRSSSGLQG*ESPPVSSGPSFPVS Trigger: TGACACTGGGAAGCTCGGTCCTGAACTCACTGGCGGGCTTTCCCATCCCTGCAGGCCGGAGGAAGAGCGCCACGGCACAGGCGGTCGTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR TCA 90 bp | TGTACACGCTGCCTCCATTGGTCAGTGCATGACTGTGCTCTACCATaGGCCAGGCACGAAGACGCTGTGCTCCTCGCTCTCCTGGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: CTRCLHWSVHDCALP*ARHEDAVLLALLGK Trigger: TTTTCCCAGGAGAGCGAGGAGCACAGCGTCTTCGTGCCTGGCTCATGGTAGAGCACAGTCATGCACTGACCAATGGAGGCAGCGTGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| 3UTR TCA 90 bp | TGTGCTCCTCGCTCTCCTGGGAAAAGTTTCAGCGCTTCTTCCAGGTaGACTTTCTTCGAGCACCCTCCTGGCCTGGCTTCTTCCGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: CAPRSPGKSFSASSR*TFFEHPPGLASSVL Trigger: GAGAACGGAAGAAGCCAGGCCAGGAGGGTGCTCGAAGAAAGTTCACCTGGAAGAAGCGCTGAAACTTTTCCCAGGAGAGCGAGGAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR TCA 90 bp | GGTCCAGGAAGTGGAAAGGGAACATCAACTGTTCTCTGTCCTGTGTaGTGGGAAAGTAAATTAGATAATCAACTCCGTTCACGTGGATCT | + |
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Preference number: 1 (lower is better) Translates to: GPGSGKGTSTVLCPV*WESKLDNQLRSRGS Trigger: AGATCCACGTGAACGGAGTTGATTATCTAATTTACTTTCCCATCACACAGGACAGAGAACAGTTGATGTTCCCTTTCCACTTCCTGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR-3UTR TCA 90 bp | ATCCGAGGATCAGGGGTAAGTAGTCCGGCTTGTCTCATCCACTCGACCTCATCCGACTGTGCTCTACCATaGGCCAGGCACGAAGACGCT | + |
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Preference number: 2 (lower is better) Translates to: IRGSGVSSPACLIHSTSSDCALP*ARHEDA Trigger: AGCGTCTTCGTGCCTGGCTCATGGTAGAGCACAGTC...GGATGAGGTCGAGTGGATGAGACAAGCCGGACTACTTACCCCTGATCCTCGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCCGTTCTCTGATCCGAGGATCAGGGGTAAGTAGTCCGGCTTGTCTCATCCCATTGGTCAGTGCATaGCTGTGCTCTACCATGAGC | + |
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Preference number: 2 (lower is better) Translates to: FFRSLIRGSGVSSPACLIPLVSA*LCSTMS Trigger: GCTCATGGTAGAGCACAGTCATGCACTGACCAATGG...GATGAGACAAGCCGGACTACTTACCCCTGATCCTCGGATCAGAGAACGGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCCGTTCTCTGATCCGAGGATCAGGGGTAAGTAGTCCGGCTTGTCTCATCGCCTCCATTGGTCAGTaGATGACTGTGCTCTACCAT | + |
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Preference number: 2 (lower is better) Translates to: FFRSLIRGSGVSSPACLIASIGQ*MTVLYH Trigger: ATGGTAGAGCACAGTCATGCACTGACCAATGGAGGC...GATGAGACAAGCCGGACTACTTACCCCTGATCCTCGGATCAGAGAACGGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR GCA 72 bp | CGCCTGCCTGCGCTGACCTCCCTCCCCCGGAGACTGTaGAGGTCACATCGTGTCTCTCCAGCCGGTCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: RLPALTSLPRRL*RSHRVSPAGPG Trigger: TCCTGGACCGGCTGGAGAGACACGATGTGACCTGCACAGTCTCCGGGGGAGGGAGGTCAGCGCAGGCAGGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR CCA 72 bp | CCTGTGCCGTGGCGCTCTTCCTCCGGCCTGCAGGGATaGGAAAGCCCGCCAGTGAGTTCAGGACCGAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: PVPWRSSSGLQG*ESPPVSSGPSF Trigger: GAAGCTCGGTCCTGAACTCACTGGCGGGCTTTCCCATCCCTGCAGGCCGGAGGAAGAGCGCCACGGCACAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR CCA 72 bp | CGAAGCTGCACAAAGCTCTGGCCATCGCCAAGCGTATaGCGCCTGCCTGCGCTGACCTCCCTCCCCCGGAGA | + |
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Preference number: 3 (lower is better) Translates to: RSCTKLWPSPSV*RLPALTSLPRR Trigger: TCTCCGGGGGAGGGAGGTCAGCGCAGGCAGGCGCCATACGCTTGGCGATGGCCAGAGCTTTGTGCAGCTTCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR GCA 72 bp | GATCTTCCCGCTTCCGTGCTCATAAACGACCGCCTGTaGCGTGGCGCTCTTCCTCCGGCCTGCAGGGATGGG | + |
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Preference number: 3 (lower is better) Translates to: DLPASVLINDRL*RGALPPACRDG Trigger: CCCATCCCTGCAGGCCGGAGGAAGAGCGCCACGGCACAGGCGGTCGTTTATGAGCACGGAAGCGGGAAGATC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR CCA 72 bp | TCCCGCTTCCGTGCTCATAAACGACCGCCTGTGCCGTaGCGCTCTTCCTCCGGCCTGCAGGGATGGGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: SRFRAHKRPPVP*RSSSGLQGWES Trigger: GCTTTCCCATCCCTGCAGGCCGGAGGAAGAGCGCCACGGCACAGGCGGTCGTTTATGAGCACGGAAGCGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR TCA 72 bp | CTTCCTCCGGCCTGCAGGGATGGGAAAGCCCGCCAGTaGGTTCAGGACCGAGCTTCCCAGTGTCACAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: LPPACRDGKARQ*VQDRASQCHSK Trigger: CTTACTGTGACACTGGGAAGCTCGGTCCTGAACTCACTGGCGGGCTTTCCCATCCCTGCAGGCCGGAGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR TCA 72 bp | TGCCTCCATTGGTCAGTGCATGACTGTGCTCTACCATaGGCCAGGCACGAAGACGCTGTGCTCCTCGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: CLHWSVHDCALP*ARHEDAVLLAL Trigger: GAGAGCGAGGAGCACAGCGTCTTCGTGCCTGGCTCATGGTAGAGCACAGTCATGCACTGACCAATGGAGGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| 3UTR TCA 72 bp | GTCCGGCTTGTCTCATCCACTCGACCTCATCCTCAGTaGCGAAGCTGCACAAAGCTCTGGCCATCGCCAAGC | + |
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Preference number: 3 (lower is better) Translates to: VRLVSSTRPHPQ*RSCTKLWPSPS Trigger: GCTTGGCGATGGCCAGAGCTTTGTGCAGCTTCGTCACTGAGGATGAGGTCGAGTGGATGAGACAAGCCGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR TCA 72 bp | GACGATGTGTACACGCTGCCTCCATTGGTCAGTGCATaGCTGTGCTCTACCATGAGCCAGGCACGAAGACGC | + |
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Preference number: 3 (lower is better) Translates to: DDVYTLPPLVSA*LCSTMSQARRR Trigger: GCGTCTTCGTGCCTGGCTCATGGTAGAGCACAGTCATGCACTGACCAATGGAGGCAGCGTGTACACATCGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| 3UTR CCA 72 bp | CTTCCAGGTGAACTTTCTTCGAGCACCCTCCTGGCCTaGCTTCTTCCGTTCTCTGATCCGAGGATCAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: LPGELSSSTLLA*LLPFSDPRIRG Trigger: ACCCCTGATCCTCGGATCAGAGAACGGAAGAAGCCAGGCCAGGAGGGTGCTCGAAGAAAGTTCACCTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR TCA 72 bp | CGCTCTCCTGGGAAAAGTTTCAGCGCTTCTTCCAGGTaGACTTTCTTCGAGCACCCTCCTGGCCTGGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: RSPGKSFSASSR*TFFEHPPGLAS Trigger: AGAAGCCAGGCCAGGAGGGTGCTCGAAGAAAGTTCACCTGGAAGAAGCGCTGAAACTTTTCCCAGGAGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| 3UTR GCA 72 bp | TCAAGACGATGTGTACACGCTGCCTCCATTGGTCAGTaGATGACTGTGCTCTACCATGAGCCAGGCACGAAG | + |
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Preference number: 3 (lower is better) Translates to: SRRCVHAASIGQ*MTVLYHEPGTK Trigger: CTTCGTGCCTGGCTCATGGTAGAGCACAGTCATGCACTGACCAATGGAGGCAGCGTGTACACATCGTCTTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| 3UTR CCA 72 bp | CAGGTCACATCGTGTCTCTCCAGCCGGTCCAGGAAGTaGAAAGGGAACATCAACTGTTCTCTGTCCTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: QVTSCLSSRSRK*KGNINCSLSCV Trigger: CACACAGGACAGAGAACAGTTGATGTTCCCTTTCCACTTCCTGGACCGGCTGGAGAGACACGATGTGACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| CDS-3UTR GCA 90 bp | AAAGCTCTGGCCATCGCCAAGCGTATGGCGCCTGCCTGCGCTGACCTCCCTCCCCCCTGCTCGTCATACTaGACGGGTTCAATCAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: KALAIAKRMAPACADLPPPCSSY*TGSISC Trigger: GCAACTGATTGAACCCGTGCAGTATGACGAGCAGGG...GGGAGGGAGGTCAGCGCAGGCAGGCGCCATACGCTTGGCGATGGCCAGAGCTTT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| CDS-3UTR TCA 90 bp | GAAAAGTTTCAGCGCTTCTTCCAGGTGAACTTTCTTCGAGCACCCTCCTGGCCTAGCCTTCGCTGGTGCTaGAGGCCATGCCCTGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: EKFQRFFQVNFLRAPSWPSLRWC*RPCPAR Trigger: ACGAGCAGGGCATGGCCTTCAGCACCAGCGAAGGCT...AGGCCAGGAGGGTGCTCGAAGAAAGTTCACCTGGAAGAAGCGCTGAAACTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| CDS-3UTR GCA 90 bp | CTCTTCCTCCGGCCTGCAGGGATGGGAAAGCCCGCCAGTGAGTTCAGGACCGAGCTTCTGCGGAACCTCTaGACAAATTCTTCTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LFLRPAGMGKPASEFRTELLRNL*TNSSSA Trigger: TGCAGAAGAAGAATTTGTGCAGAGGTTCCGCAGAAG...CTCGGTCCTGAACTCACTGGCGGGCTTTCCCATCCCTGCAGGCCGGAGGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| CDS-3UTR GCA 90 bp | GAAAAGTTTCAGCGCTTCTTCCAGGTGAACTTTCTTCGAGCACCCTCCTGGCCTGACAGTGGCCCTCTGTaGTTTTCCAGCTGCATGACC | + |
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Preference number: 4 (lower is better) Translates to: EKFQRFFQVNFLRAPSWPDSGPL*FSSCMT Trigger: GGTCATGCAGCTGGAAAAGCACAGAGGGCCACTGTC...AGGCCAGGAGGGTGCTCGAAGAAAGTTCACCTGGAAGAAGCGCTGAAACTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| CDS-3UTR GCA 90 bp | GCTTGTCTCATCCACTCGACCTCATCCTCAGTGACGAAGCTGCACAAAGCTCTGCTGTGCTTTTCCAGCTaGATGACCTTTCCATACACG | + |
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Preference number: 4 (lower is better) Translates to: ACLIHSTSSSVTKLHKALLCFSS*MTFPYT Trigger: CGTGTATGGAAAGGTCATGCAGCTGGAAAAGCACAG...CAGAGCTTTGTGCAGCTTCGTCACTGAGGATGAGGTCGAGTGGATGAGACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| CDS-3UTR TCA 90 bp | TTCTTCCGTTCTCTGATCCGAGGATCAGGGGTAAGTAGTCCGGCTTGTCTCATCTCTCGAGCAGTCGGATaGACTGTGCATAATCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: FFRSLIRGSGVSSPACLISRAVG*TVHNLH Trigger: ATGAAGATTATGCACAGTTCATCCGACTGCTCGAGA...GATGAGACAAGCCGGACTACTTACCCCTGATCCTCGGATCAGAGAACGGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| CDS TCA 90 bp | CGACCGCCTGTGCCGTGGCGCTCTTCCTCCGGCCTTCGCTGGTGCTaGAGGCCATGCCCTGCTCGTCATACTGCACGGGTTCAATCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RPPVPWRSSSGLRWC*RPCPARHTARVQSV Trigger: AACTGATTGAACCCGTGCAGTATGACGAGCAGGGCATGGCCTTCAGCACCAGCGAAGGCCGGAGGAAGAGCGCCACGGCACAGGCGGTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057208.13 |
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| CDS CCA 90 bp | CCATCTGCTGCCAATCAGGTCTCTGGACTCAGCGCTTGCCGACAGTaGCCCTCTGTGCTTTTCCAGCTGCATGACCTTTCCATACACGTC | + |
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Preference number: 5 (lower is better) Translates to: PSAANQVSGLSACRQ*PSVLFQLHDLSIHV Trigger: GACGTGTATGGAAAGGTCATGCAGCTGGAAAAGCACAGAGGGCCACTGTCGGCAAGCGCTGAGTCCAGAGACCTGATTGGCAGCAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| CDS GCA 90 bp | CTTAATCAGCCATCTGCTGCCAATCAGGTCTCTGGACTCAGCGCTTaGCGACAGTGGCCCTCTGTGCTTTTCCAGCTGCATGACCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: LNQPSAANQVSGLSA*RQWPSVLFQLHDLS Trigger: GGAAAGGTCATGCAGCTGGAAAAGCACAGAGGGCCACTGTCGGCAAGCGCTGAGTCCAGAGACCTGATTGGCAGCAGATGGCTGATTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| CDS GCA 90 bp | CCAATCAGGTCTCTGGACTCAGCGCTTGCCGACAGTGGCCCTCTGTaGTTTTCCAGCTGCATGACCTTTCCATACACGTCGTGCATTAAT | + |
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Preference number: 5 (lower is better) Translates to: PIRSLDSALADSGPL*FSSCMTFPYTSCIN Trigger: ATTAATGCACGACGTGTATGGAAAGGTCATGCAGCTGGAAAAGCACAGAGGGCCACTGTCGGCAAGCGCTGAGTCCAGAGACCTGATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| CDS TCA 90 bp | CTGCAGGCCCGCACGGCAATGTCAATAGCTTCTCGAGCAGTCGGATaGACTGTGCATAATCTTCATCTGACAGTTTTTCCACTAACATTT | + |
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Preference number: 5 (lower is better) Translates to: LQARTAMSIASRAVG*TVHNLHLTVFPLTF Trigger: AAATGTTAGTGGAAAAACTGTCAGATGAAGATTATGCACAGTTCATCCGACTGCTCGAGAAGCTATTGACATTGCCGTGCGGGCCTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| CDS CAA 72 bp | GCCATCTGCTGCCAATCAGGTCTCTGGACTCAGCGCTaGCCGACAGTGGCCCTCTGTGCTTTTCCAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: AICCQSGLWTQR*PTVALCAFPAA Trigger: TGCAGCTGGAAAAGCACAGAGGGCCACTGTCGGCAAGCGCTGAGTCCAGAGACCTGATTGGCAGCAGATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| CDS TCA 72 bp | ACACTTCCCGCTGACTGCATAAGCCTTCGCTGGTGCTaGAGGCCATGCCCTGCTCGTCATACTGCACGGGTT | + |
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Preference number: 6 (lower is better) Translates to: TLPADCISLRWC*RPCPARHTARV Trigger: AACCCGTGCAGTATGACGAGCAGGGCATGGCCTTCAGCACCAGCGAAGGCTTATGCAGTCAGCGGGAAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201108.4 |
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| CDS GCA 72 bp | CCATCTGCTGCCAATCAGGTCTCTGGACTCAGCGCTTaGCGACAGTGGCCCTCTGTGCTTTTCCAGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: PSAANQVSGLSA*RQWPSVLFQLH Trigger: ATGCAGCTGGAAAAGCACAGAGGGCCACTGTCGGCAAGCGCTGAGTCCAGAGACCTGATTGGCAGCAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| CDS GCA 72 bp | TCTCTGGACTCAGCGCTTGCCGACAGTGGCCCTCTGTaGTTTTCCAGCTGCATGACCTTTCCATACACGTCG | + |
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Preference number: 6 (lower is better) Translates to: SLDSALADSGPL*FSSCMTFPYTS Trigger: CGACGTGTATGGAAAGGTCATGCAGCTGGAAAAGCACAGAGGGCCACTGTCGGCAAGCGCTGAGTCCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| CDS GCA 72 bp | TTCCTCCGGCCTTCGCTGGTGCTGAAGGCCATGCCCTaGTCGTCATACTGCACGGGTTCAATCAGTTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: FLRPSLVLKAMP*SSYCTGSISCF Trigger: AAAGCAACTGATTGAACCCGTGCAGTATGACGAGCAGGGCATGGCCTTCAGCACCAGCGAAGGCCGGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057208.13 |
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| CDS CCA 72 bp | CAACTGTGGTATGTATTAGCTTTGATAGCTGGAACCTaGTCCCTGTCTGCCAGCCAACCGCCGAGGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: QLWYVLALIAGT*SLSASQPPRLS Trigger: GGACAGCCTCGGCGGTTGGCTGGCAGACAGGGACCAGGTTCCAGCTATCAAAGCTAATACATACCACAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057208.13 |
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| CDS GCA 72 bp | GCGCTTGCCGACAGTGGCCCTCTGTGCTTTTCCAGCTaGATGACCTTTCCATACACGTCGTGCATTAATGAA | + |
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Preference number: 6 (lower is better) Translates to: ALADSGPLCFSS*MTFPYTSCINE Trigger: TTCATTAATGCACGACGTGTATGGAAAGGTCATGCAGCTGGAAAAGCACAGAGGGCCACTGTCGGCAAGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| CDS CCA 72 bp | GTTGTTACAACTGTGGTATGTATTAGCTTTGATAGCTaGAACCTGGTCCCTGTCTGCCAGCCAACCGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: VVTTVVCISFDS*NLVPVCQPTAE Trigger: CTCGGCGGTTGGCTGGCAGACAGGGACCAGGTTCCAGCTATCAAAGCTAATACATACCACAGTTGTAACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057208.13 |
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| CDS CAA 90 bp | CTTGGACATTTTTCTTTGTTGTTACAACTGTGGTATGTATTAGCTTaGATAGCTGGAACCTGGTCCCTGTCTGCCAGCCAACCGCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: LGHFSLLLQLWYVLA*IAGTWSLSASQPPR Trigger: CCTCGGCGGTTGGCTGGCAGACAGGGACCAGGTTCCAGCTATCAAAGCTAATACATACCACAGTTGTAACAACAAAGAAAAATGTCCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057208.13 |
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| CDS TCA 72 bp | CGCACGGCAATGTCAATAGCTTCTCGAGCAGTCGGATaGACTGTGCATAATCTTCATCTGACAGTTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: RTAMSIASRAVG*TVHNLHLTVFP Trigger: TGGAAAAACTGTCAGATGAAGATTATGCACAGTTCATCCGACTGCTCGAGAAGCTATTGACATTGCCGTGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057208.13 ENSMUST00000201108.4 |
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| CDS CAA 72 bp | TTTTCTTTGTTGTTACAACTGTGGTATGTATTAGCTTaGATAGCTGGAACCTGGTCCCTGTCTGCCAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: FSLLLQLWYVLA*IAGTWSLSASQ Trigger: TTGGCTGGCAGACAGGGACCAGGTTCCAGCTATCAAAGCTAATACATACCACAGTTGTAACAACAAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057208.13 |
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| CDS CAA 72 bp | TCTTCAGCAAAAGTTTCCGGGTCTTCTCCCATCATGTaGGCTAAGTGCCTCTTCCCTATATTGAATTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSAKVSGSSPIM*AKCLFPILNSS Trigger: TGAAGAATTCAATATAGGGAAGAGGCACTTAGCCAACATGATGGGAGAAGACCCGGAAACTTTTGCTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057208.13 |
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| CDS CCA 72 bp | TTGGAAAAATATGTTCAGGATGCTTCATCATTGGCCTaGCTCGCTTCTCAAACAAACCACTTGGAAAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: LEKYVQDASSLA*LASQTNHLEKG Trigger: ACCTTTTTCCAAGTGGTTTGTTTGAGAAGCGAGCCAGGCCAATGATGAAGCATCCTGAACATATTTTTCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057208.13 |
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| CDS CAA 90 bp | TCAATATCCTCTTCAGCAAAAGTTTCCGGGTCTTCTCCCATCATGTaGGCTAAGTGCCTCTTCCCTATATTGAATTCTTCAATCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SISSSAKVSGSSPIM*AKCLFPILNSSICF Trigger: AAAGCAGATTGAAGAATTCAATATAGGGAAGAGGCACTTAGCCAACATGATGGGAGAAGACCCGGAAACTTTTGCTGAAGAGGATATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057208.13 |
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| CDS CCA 72 bp | TTGAGGCTTGGACATTTTTCTTTGTTGTTACAACTGTaGTATGTATTAGCTTTGATAGCTGGAACCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LRLGHFSLLLQL*YVLALIAGTWS Trigger: GGACCAGGTTCCAGCTATCAAAGCTAATACATACCACAGTTGTAACAACAAAGAAAAATGTCCAAGCCTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057208.13 |
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| CDS CAA 90 bp | CTTCTGTATATGATTCCTGTCTTGAGGCTTGGACATTTTTCTTTGTaGTTACAACTGTGGTATGTATTAGCTTTGATAGCTGGAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: LLYMIPVLRLGHFSL*LQLWYVLALIAGTW Trigger: CCAGGTTCCAGCTATCAAAGCTAATACATACCACAGTTGTAACAACAAAGAAAAATGTCCAAGCCTCAAGACAGGAATCATATACAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057208.13 |
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| CDS CAA 90 bp | AATCTTCTGTATATGATTCCTGTCTTGAGGCTTGGACATTTTTCTTaGTTGTTACAACTGTGGTATGTATTAGCTTTGATAGCTGGAACC | + |
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Preference number: 6 (lower is better) Translates to: NLLYMIPVLRLGHFS*LLQLWYVLALIAGT Trigger: GGTTCCAGCTATCAAAGCTAATACATACCACAGTTGTAACAACAAAGAAAAATGTCCAAGCCTCAAGACAGGAATCATATACAGAAGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057208.13 |
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