Pregenerated sensors for MRPS7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046756Ensembl transcript IDs: ENSMUST00000058109.9
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGTGTGAGTGCTGGGAATCAAACCAGGTCCTTTGGAAAGAGCAGTaGGTGCCTTTAACCACTGAGCCACCTCTCCAGCCGTCGGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: PCECWESNQVLWKEQ*VPLTTEPPLQPSGG Trigger: ACCACCCGACGGCTGGAGAGGTGGCTCAGTGGTTAAAGGCACTCACTGCTCTTTCCAAAGGACCTGGTTTGATTCCCAGCACTCACACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR TCA 90 bp | CAGACACACATCAGAAGAGGGCGTCAGAGCCCATTACAGGTGGTGTaGGCCACCATGTGGTTGCTGGGAACTGAACTCAGGACCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: QTHIRRGRQSPLQVV*ATMWLLGTELRTSG Trigger: TCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACACCACCTGTAATGGGCTCTGACGCCCTCTTCTGATGTGTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR GCA 90 bp | CTCCAGCTAAAGACCGAACCCAGGGCCTTGTGCTTGCTAGGCAAGTaGTCTGCCACTGAGCTAAATCACCAACCCCAACAGCCAGTACTC | + |
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Preference number: 1 (lower is better) Translates to: LQLKTEPRALCLLGK*SATELNHQPQQPVL Trigger: GAGTACTGGCTGTTGGGGTTGGTGATTTAGCTCAGTGGCAGAGCACTTGCCTAGCAAGCACAAGGCCCTGGGTTCGGTCTTTAGCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR TCA 90 bp | ATCAAACCAGGTCCTTTGGAAAGAGCAGTGAGTGCCTTTAACCACTaGGCCACCTCTCCAGCCGTCGGGTGGTTTCTCGTGGCAGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: IKPGPLERAVSAFNH*ATSPAVGWFLVAVC Trigger: ACACACTGCCACGAGAAACCACCCGACGGCTGGAGAGGTGGCTCAGTGGTTAAAGGCACTCACTGCTCTTTCCAAAGGACCTGGTTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR TCA 90 bp | ATCCAAAGGTGTACCCCAAGCCAAAGGAAGAGGTCTTTTTACTTATaGGTCCACTGCAGCTGTCTTCAGACACACATCAGAAGAGGGCGT | + |
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Preference number: 1 (lower is better) Translates to: IQRCTPSQRKRSFYL*VHCSCLQTHIRRGR Trigger: ACGCCCTCTTCTGATGTGTGTCTGAAGACAGCTGCAGTGGACTCATAAGTAAAAAGACCTCTTCCTTTGGCTTGGGGTACACCTTTGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGGTTGCTGGGAACTGAACTCAGGACCTCTGGAAGAACAGCCAGTACTCCTCCATGTGCACGCCTGGTaGCCAGAGGTCAGAAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: CGCWELNSGPLEEQPVLLHVHAW*PEVRRY Trigger: ATACCTTCTGACCTCTGGGCACCAGGCGTGCACATG...GAGGAGTACTGGCTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGCTAAATCACCAACCCCAACAGCCAGTACTCTTAACCACTGAGCTCTCTTGTCTGTATACCATGTaGACGCCTGGTGCCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: TELNHQPQQPVLLTTELSCLYTM*TPGAQR Trigger: CCTCTGGGCACCAGGCGTGCACATGGTATACAGACA...AGAGAGCTCAGTGGTTAAGAGTACTGGCTGTTGGGGTTGGTGATTTAGCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR-3UTR TCA 90 bp | GACCTGAGTTTCTTGCAGGAAATCTCTGAGACACATTCTGTCTTTGAGAGGTTGAGTGCCTTTAACCACTaGGCCACCTCTCCAGCCGTC | + |
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Preference number: 2 (lower is better) Translates to: DLSFLQEISETHSVFERLSAFNH*ATSPAV Trigger: GACGGCTGGAGAGGTGGCTCAGTGGTTAAAGGCACT...CAACCTCTCAAAGACAGAATGTGTCTCAGAGATTTCCTGCAAGAAACTCAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGGTGTACCCCAAGCCAAAGGAAGAGGTCTTTTTACTTATGAGTCCACTGGAACCCAGGGCCTTGTaGTTGCTAGGCAAGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PKVYPKPKEEVFLLMSPLEPRAL*LLGKCS Trigger: AGAGCACTTGCCTAGCAAGCACAAGGCCCTGGGTTC...CAGTGGACTCATAAGTAAAAAGACCTCTTCCTTTGGCTTGGGGTACACCTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGGTGTACCCCAAGCCAAAGGAAGAGGTCTTTTTACTTATGAGTCCACTGTCGGGTGGTTTCTCGTaGCAGTGTGTCCTTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PKVYPKPKEEVFLLMSPLSGGFS*QCVLSH Trigger: GTGGGAAAGGACACACTGCCACGAGAAACCACCCGA...CAGTGGACTCATAAGTAAAAAGACCTCTTCCTTTGGCTTGGGGTACACCTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGGTGTACCCCAAGCCAAAGGAAGAGGTCTTTTTACTTATGAGTCCACTGAGTACTCTTAACCACTaGGCTCTCTCTCCAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: PKVYPKPKEEVFLLMSPLSTLNH*ALSPAP Trigger: TGGGGCTGGAGAGAGAGCTCAGTGGTTAAGAGTACT...CAGTGGACTCATAAGTAAAAAGACCTCTTCCTTTGGCTTGGGGTACACCTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGCTAAATCACCAACCCCAACAGCCAGTACTCTTAACCACTGAGCTCTCTCTTTGGAAAGAGCAGTaGGTGCCTTTAACCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: TELNHQPQQPVLLTTELSLWKEQ*VPLTTE Trigger: CTCAGTGGTTAAAGGCACTCACTGCTCTTTCCAAAG...AGAGAGCTCAGTGGTTAAGAGTACTGGCTGTTGGGGTTGGTGATTTAGCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCATGGAGAATCAAAGACTCACAGAATGGAAGACTGCATTACAAACAGCACCTCCGTGTGAGTGCTaGGAATCAAACCAGGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: ASMENQRLTEWKTALQTAPPCEC*ESNQVL Trigger: AAGGACCTGGTTTGATTCCCAGCACTCACACGGAGG...TGCTGTTTGTAATGCAGTCTTCCATTCTGTGAGTCTTTGATTCTCCATGCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGCTAAATCACCAACCCCAACAGCCAGTACTCTTAACCACTGAGCTCTCTCACAGAATGGAAGACTaGATTACAAACAGCACTCTC | + |
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Preference number: 2 (lower is better) Translates to: TELNHQPQQPVLLTTELSHRMED*ITNSTL Trigger: GAGAGTGCTGTTTGTAATGCAGTCTTCCATTCTGTG...AGAGAGCTCAGTGGTTAAGAGTACTGGCTGTTGGGGTTGGTGATTTAGCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGCTAAATCACCAACCCCAACAGCCAGTACTCTTAACCACTGAGCTCTCTCAAAGACTCACAGAATaGAAGACTGCATTACAAACA | + |
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Preference number: 2 (lower is better) Translates to: TELNHQPQQPVLLTTELSQRLTE*KTALQT Trigger: TGTTTGTAATGCAGTCTTCCATTCTGTGAGTCTTTG...AGAGAGCTCAGTGGTTAAGAGTACTGGCTGTTGGGGTTGGTGATTTAGCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR TCA 72 bp | GGTCCTTTGGAAAGAGCAGTGAGTGCCTTTAACCACTaGGCCACCTCTCCAGCCGTCGGGTGGTTTCTCGTG | + |
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Preference number: 3 (lower is better) Translates to: GPLERAVSAFNH*ATSPAVGWFLV Trigger: CACGAGAAACCACCCGACGGCTGGAGAGGTGGCTCAGTGGTTAAAGGCACTCACTGCTCTTTCCAAAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR TCA 72 bp | ACAGGTGGTGTGAGCCACCATGTGGTTGCTGGGAACTaGACTCAGGACCTCTGGAAGAACAGCCAGTACTCC | + |
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Preference number: 3 (lower is better) Translates to: TGGVSHHVVAGN*TQDLWKNSQYS Trigger: GGAGTACTGGCTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACACCACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR TCA 72 bp | ATCAGAAGAGGGCGTCAGAGCCCATTACAGGTGGTGTaGGCCACCATGTGGTTGCTGGGAACTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: IRRGRQSPLQVV*ATMWLLGTELR Trigger: CCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACACCACCTGTAATGGGCTCTGACGCCCTCTTCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR GCA 72 bp | AAGACCGAACCCAGGGCCTTGTGCTTGCTAGGCAAGTaGTCTGCCACTGAGCTAAATCACCAACCCCAACAG | + |
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Preference number: 3 (lower is better) Translates to: KTEPRALCLLGK*SATELNHQPQQ Trigger: CTGTTGGGGTTGGTGATTTAGCTCAGTGGCAGAGCACTTGCCTAGCAAGCACAAGGCCCTGGGTTCGGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR CCA 72 bp | GCCTGGTGCCCAGAGGTCAGAAGGTATCGAAACCTTTaGAACAGGAGTTACAGGTGGTCAGTGAGCCTCCGT | + |
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Preference number: 3 (lower is better) Translates to: AWCPEVRRYRNL*NRSYRWSVSLR Trigger: ACGGAGGCTCACTGACCACCTGTAACTCCTGTTCCAAAGGTTTCGATACCTTCTGACCTCTGGGCACCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR TCA 72 bp | TGCTGGGAATCAAACCAGGTCCTTTGGAAAGAGCAGTaGGTGCCTTTAACCACTGAGCCACCTCTCCAGCCG | + |
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Preference number: 3 (lower is better) Translates to: CWESNQVLWKEQ*VPLTTEPPLQP Trigger: CGGCTGGAGAGGTGGCTCAGTGGTTAAAGGCACTCACTGCTCTTTCCAAAGGACCTGGTTTGATTCCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR GCA 72 bp | CAGGAGTTACAGGTGGTCAGTGAGCCTCCGTGTGAGTaGTGGGAATCAAACCAGGTCCTTTGGAAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: QELQVVSEPPCE*WESNQVLWKEQ Trigger: CTGCTCTTTCCAAAGGACCTGGTTTGATTCCCAGCACTCACACGGAGGCTCACTGACCACCTGTAACTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR GCA 72 bp | AGAGCCCATTACAGGTGGTGTGAGCCACCATGTGGTTaGTGGGAACTGAACTCAGGACCTCTGGAAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: RAHYRWCEPPCG*WELNSGPLEEQ Trigger: CTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACACCACCTGTAATGGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR TCA 72 bp | GAGACTTTTGTGGAGGAAGCCTGTTTCCTCCAGTCATaGGTGACTGCCTCACCAGGTTGGGGTGAGGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: ETFVEEACFLQS*VTASPGWGEGF Trigger: AAAACCCTCACCCCAACCTGGTGAGGCAGTCACTCATGACTGGAGGAAACAGGCTTCCTCCACAAAAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR-3UTR CAA 90 bp | CGTATAGATGTTTTGTCTGCACCTATGTCTGTATACCATGTGCACGCCTGGTGCATCAAACCAGGTCCTTaGGAAAGAGCAGTGAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: RIDVLSAPMSVYHVHAWCIKPGP*ERAVSA Trigger: GGCACTCACTGCTCTTTCCAAAGGACCTGGTTTGAT...GCACCAGGCGTGCACATGGTATACAGACATAGGTGCAGACAAAACATCTATACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR TCA 72 bp | AAATCACCAACCCCAACAGCCAGTACTCTTAACCACTaGGCTCTCTCTCCAGCCCCAGAGGTCTTTATTCTA | + |
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Preference number: 3 (lower is better) Translates to: KSPTPTASTLNH*ALSPAPEVFIL Trigger: TAGAATAAAGACCTCTGGGGCTGGAGAGAGAGCTCAGTGGTTAAGAGTACTGGCTGTTGGGGTTGGTGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR-3UTR CAA 90 bp | CCAAAGGTGTACCCCAAGCCAAAGGAAGAGGTCTTTTTACTTATGAGTCCACTGTTGGACCTGAGTTTCTaGCAGGAAATCTCTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: PKVYPKPKEEVFLLMSPLLDLSF*QEISET Trigger: TGTCTCAGAGATTTCCTGCAAGAAACTCAGGTCCAA...CAGTGGACTCATAAGTAAAAAGACCTCTTCCTTTGGCTTGGGGTACACCTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR TCA 72 bp | AGCCCCAGAGGTCTTTATTCTAGTCCAGATTGGACCTaGGTTTCTTGCAGGAAATCTCTGAGACACATTCTG | + |
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Preference number: 3 (lower is better) Translates to: SPRGLYSSPDWT*VSCRKSLRHIL Trigger: CAGAATGTGTCTCAGAGATTTCCTGCAAGAAACTCAGGTCCAATCTGGACTAGAATAAAGACCTCTGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR TCA 72 bp | TGTACCCCAAGCCAAAGGAAGAGGTCTTTTTACTTATaGGTCCACTGCAGCTGTCTTCAGACACACATCAGA | + |
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Preference number: 3 (lower is better) Translates to: CTPSQRKRSFYL*VHCSCLQTHIR Trigger: TCTGATGTGTGTCTGAAGACAGCTGCAGTGGACTCATAAGTAAAAAGACCTCTTCCTTTGGCTTGGGGTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| 3UTR CCA 72 bp | CTTCTAGCCAGCATGGAGAATCAAAGACTCACAGAATaGAAGACTGCATTACAAACAGCACTCTCCGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: LLASMENQRLTE*KTALQTALSVL Trigger: AAGGACGGAGAGTGCTGTTTGTAATGCAGTCTTCCATTCTGTGAGTCTTTGATTCTCCATGCTGGCTAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR TCA 90 bp | CAGCCGTCGGGTGGTTTCTCGTGGCAGTGTGTCCTTTCCCACCTCTCCTCTCCTCAGGCTCACAGTTTTTaGGTGCCTCGTGGAAGATCC | + |
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Preference number: 4 (lower is better) Translates to: QPSGGFSWQCVLSHLSSPQAHSF*VPRGRS Trigger: GGATCTTCCACGAGGCACTCAAAAACTGTGAGCCTG...AGGAGAGGAGAGGTGGGAAAGGACACACTGCCACGAGAAACCACCCGACGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR TCA 90 bp | CAGCCGTCGGGTGGTTTCTCGTGGCAGTGTGTCCTTTCCCACCTCTCCTCTCCTTCTCTCGGCACTCTGTaGTCATCCACTTCATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QPSGGFSWQCVLSHLSSPSLGTL*SSTSWP Trigger: TGGCCATGAAGTGGATGATCACAGAGTGCCGAGAGA...AGGAGAGGAGAGGTGGGAAAGGACACACTGCCACGAGAAACCACCCGACGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR TCA 90 bp | GAGCTAAATCACCAACCCCAACAGCCAGTACTCTTAACCACTGAGCTCTCTCTCTCCCCCTCACCTGTGTaGGCCCTGGAAGGTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ELNHQPQQPVLLTTELSLSPSPV*ALEGSR Trigger: TCTGGAACCTTCCAGGGCTCACACAGGTGAGGGGGA...GAGAGAGAGCTCAGTGGTTAAGAGTACTGGCTGTTGGGGTTGGTGATTTAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR CCA 90 bp | CAGCCGTCGGGTGGTTTCTCGTGGCAGTGTGTCCTTTCCCACCTCTCCTCTCCTGTTTTCTTGAGCTCCTaGTCATACTTCTCCTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: QPSGGFSWQCVLSHLSSPVFLSS*SYFSSS Trigger: CGAAGAGGAGAAGTATGACCAGGAGCTCAAGAAAAC...AGGAGAGGAGAGGTGGGAAAGGACACACTGCCACGAGAAACCACCCGACGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR TCA 90 bp | TTGCTGGGAACTGAACTCAGGACCTCTGGAAGAACAGCCAGTACTCCTCCTCCCCTCCAGCAGCTCATGTaGCAGTTTCTCTGGCATAAG | + |
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Preference number: 4 (lower is better) Translates to: LLGTELRTSGRTASTPPPLQQLM*QFLWHK Trigger: CTTATGCCAGAGAAACTGTCACATGAGCTGCTGGAG...GGGAGGAGGAGTACTGGCTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR CCA 90 bp | CGTATAGATGTTTTGTCTGCACCTATGTCTGTATACCATGTGCACGCCTGGTGCCACCTGTGTGAGCCCTaGAAGGTTCCAGACGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: RIDVLSAPMSVYHVHAWCHLCEP*KVPDGA Trigger: TGCGCCGTCTGGAACCTTCCAGGGCTCACACAGGTG...GCACCAGGCGTGCACATGGTATACAGACATAGGTGCAGACAAAACATCTATACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAGAGGTCTTTATTCTAGTCCAGATTGGACCTGAGTTTCTTGCAGGAAGGGGTTCCGTTCAATaGTGGCCTGTTCCTCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: PAPEVFILVQIGPEFLAGRGSVQ*WPVPPQ Trigger: CTGCGGAGGAACAGGCCACCATTGAACGGAACCCCT...TCCTGCAAGAAACTCAGGTCCAATCTGGACTAGAATAAAGACCTCTGGGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR TCA 90 bp | ACTGAGCTAAATCACCAACCCCAACAGCCAGTACTCTTAACCACTGAGCTCTCTCCAGAGTCTGAGCCATaGGAGACCGGGCCAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: TELNHQPQQPVLLTTELSPESEP*ETGPEL Trigger: AAGTTCTGGCCCGGTCTCTCATGGCTCAGACTCTGG...AGAGAGCTCAGTGGTTAAGAGTACTGGCTGTTGGGGTTGGTGATTTAGCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR GCA 90 bp | GACCTGAGTTTCTTGCAGGAAATCTCTGAGACACATTCTGTCTTTGAGAGGTTGGTTCCGCCACCGGCTTaGGGTAATATTCCTTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: DLSFLQEISETHSVFERLVPPPA*GNIPCQ Trigger: TTGACAAGGAATATTACCGCAAGCCGGTGGCGGAAC...CAACCTCTCAAAGACAGAATGTGTCTCAGAGATTTCCTGCAAGAAACTCAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR GCA 90 bp | GACCTGAGTTTCTTGCAGGAAATCTCTGAGACACATTCTGTCTTTGAGAGGTTGGGCACGGTTGGCCTCTaGCATCTTATGCATATTGTG | + |
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Preference number: 4 (lower is better) Translates to: DLSFLQEISETHSVFERLGTVGL*HLMHIV Trigger: CACAATATGCATAAGATGGCAGAGGCCAACCGTGCC...CAACCTCTCAAAGACAGAATGTGTCTCAGAGATTTCCTGCAAGAAACTCAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR GCA 90 bp | CCAAAGGTGTACCCCAAGCCAAAGGAAGAGGTCTTTTTACTTATGAGTCCACTGCTCACAGTTTTTGAGTaGCTCGTGGAAGATCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: PKVYPKPKEEVFLLMSPLLTVFE*LVEDPV Trigger: TACAGGATCTTCCACGAGGCACTCAAAAACTGTGAG...CAGTGGACTCATAAGTAAAAAGACCTCTTCCTTTGGCTTGGGGTACACCTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR GCA 90 bp | CCAAAGGTGTACCCCAAGCCAAAGGAAGAGGTCTTTTTACTTATGAGTCCACTGGCCTCTGCCATCTTATaGATATTGTGCTTCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: PKVYPKPKEEVFLLMSPLASAIL*ILCFLL Trigger: CAAGAGGAAGCACAATATGCATAAGATGGCAGAGGC...CAGTGGACTCATAAGTAAAAAGACCTCTTCCTTTGGCTTGGGGTACACCTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR GCA 90 bp | CTGCATTACAAACAGCACTCTCCGTCCTTAACTTCCAGAACTTTCCAACAGGACATCTTATGCATATTGTaGTTCCTCTTGATCACGGGA | + |
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Preference number: 4 (lower is better) Translates to: LHYKQHSPSLTSRTFQQDILCIL*FLLITG Trigger: TCCCGTGATCAAGAGGAAGCACAATATGCATAAGAT...GTCCTGTTGGAAAGTTCTGGAAGTTAAGGACGGAGAGTGCTGTTTGTAATGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR CAA 90 bp | CCAAAGGTGTACCCCAAGCCAAAGGAAGAGGTCTTTTTACTTATGAGTCCACTGATCATGTTGGTGAATTaGCTGATGACCGGGTCTGCG | + |
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Preference number: 5 (lower is better) Translates to: PKVYPKPKEEVFLLMSPLIMLVN*LMTGSA Trigger: CGCAGACCCGGTCATCAGCAAATTCACCAACATGAT...CAGTGGACTCATAAGTAAAAAGACCTCTTCCTTTGGCTTGGGGTACACCTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS-3UTR CAA 90 bp | CAGTTTTGCTCAAGTTGTGGCCAACTTCTAGCCAGCATGGAGAATCAAAGACTCACAGGCTCACAGTTTTaGAGTGCCTCGTGGAAGATC | + |
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Preference number: 5 (lower is better) Translates to: QFCSSCGQLLASMENQRLTGSQF*SASWKI Trigger: GATCTTCCACGAGGCACTCAAAAACTGTGAGCCTGT...GAGTCTTTGATTCTCCATGCTGGCTAGAAGTTGGCCACAACTTGAGCAAAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS TCA 72 bp | GGAATTCGGGGGCATAGCGGCTCCCCCTCACCTGTGTaGGCCCTGGAAGGTTCCAGACGGCGCACCTCACTC | + |
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Preference number: 6 (lower is better) Translates to: GIRGHSGSPSPV*ALEGSRRRTSL Trigger: GAGTGAGGTGCGCCGTCTGGAACCTTCCAGGGCTCACACAGGTGAGGGGGAGCCGCTATGCCCCCGAATTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS CCA 72 bp | GTGCCTCGTGGAAGATCCTGTAGGGGTTCCGTTCAATaGTGGCCTGTTCCTCCGCAGAGGCAGCACGGTACT | + |
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Preference number: 6 (lower is better) Translates to: VPRGRSCRGSVQ*WPVPPQRQHGT Trigger: AGTACCGTGCTGCCTCTGCGGAGGAACAGGCCACCATTGAACGGAACCCCTACAGGATCTTCCACGAGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS GCA 72 bp | CATCATCATGTTGGTGAATTTGCTGATGACCGGGTCTaGGAACACCGAGCTGGTTTCAGTCGCGGCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HHHVGEFADDRV*EHRAGFSRGRS Trigger: GCTGCGGCCGCGACTGAAACCAGCTCGGTGTTCGCAGACCCGGTCATCAGCAAATTCACCAACATGATGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS CAA 90 bp | GAGCTGGTTTCAGTCGCGGCCGCAGCTTTGATAAACTGGGTTTTCTaGAGCTCCTGGTCATACTTCTCCTCTTCGGTGAGTTCCGCCACC | + |
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Preference number: 6 (lower is better) Translates to: ELVSVAAAALINWVF*SSWSYFSSSVSSAT Trigger: GGTGGCGGAACTCACCGAAGAGGAGAAGTATGACCAGGAGCTCAAGAAAACCCAGTTTATCAAAGCTGCGGCCGCGACTGAAACCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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| CDS TCA 72 bp | ACTGCTTCCTTTTCACAGCTTCCAGAGTCTGAGCCATaGGAGACCGGGCCAGAACTTTGTTGCCTCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TASFSQLPESEP*ETGPELCCLPS Trigger: TGAAGGGAGGCAACAAAGTTCTGGCCCGGTCTCTCATGGCTCAGACTCTGGAAGCTGTGAAAAGGAAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058109.9 |
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