Pregenerated sensors for MRPS5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027374Ensembl transcript IDs: ENSMUST00000028852.13, ENSMUST00000146131.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCATAGGCAGCAGGCAGAAAGATAACCTCAAGGGTCATCCCCAGTaGCATACCTCCTCCAACAAGGCCACACCTAACCCTTCCCAAATA | + |
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Preference number: 1 (lower is better) Translates to: SIGSRQKDNLKGHPQ*HTSSNKATPNPSQI Trigger: TATTTGGGAAGGGTTAGGTGTGGCCTTGTTGGAGGAGGTATGTCACTGGGGATGACCCTTGAGGTTATCTTTCTGCCTGCTGCCTATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR GCA 90 bp | TGTAAAGTACACAGACAGGGTGAGTCTATGAAAGAATCAAAAACATaGCAGGGGTGTGCTTCGGTGGCAGAGCACTTGTCTAGCTCGTCC | + |
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Preference number: 1 (lower is better) Translates to: CKVHRQGESMKESKT*QGCASVAEHLSSSS Trigger: GGACGAGCTAGACAAGTGCTCTGCCACCGAAGCACACCCCTGGCATGTTTTTGATTCTTTCATAGACTCACCCTGTCTGTGTACTTTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR CCA 90 bp | TCTGATGGGCTTACTGCCAGACTGAACACAACAAGGACTTCTAGGTaGAGGCTACCTCAAGAGAAACGTACACAGCAGGAAAAAGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: SDGLTARLNTTRTSR*RLPQEKRTQQEKEG Trigger: TCCCTCTTTTTCCTGCTGTGTACGTTTCTCTTGAGGTAGCCTCCACCTAGAAGTCCTTGTTGTGTTCAGTCTGGCAGTAAGCCCATCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR GCA 90 bp | ATGTGTGTATGTGCAGGGGAATATACTAGGCAGGTGAAGAGAAAGTaGTTAGGCACACTAAATCACTGTTGGTTTATTAGACTGTGTGAC | + |
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Preference number: 1 (lower is better) Translates to: MCVCAGEYTRQVKRK*LGTLNHCWFIRLCD Trigger: GTCACACAGTCTAATAAACCAACAGTGATTTAGTGTGCCTAAGCACTTTCTCTTCACCTGCCTAGTATATTCCCCTGCACATACACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR CCA 90 bp | CCAATCAACCTGCCTTGTAAGCTAAGATACAAGACAACGAAGAGATaGGGGTCACAAGCACAGACTTACATTAACAAAAACAAACAAACA | + |
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Preference number: 1 (lower is better) Translates to: PINLPCKLRYKTTKR*GSQAQTYINKNKQT Trigger: TGTTTGTTTGTTTTTGTTAATGTAAGTCTGTGCTTGTGACCCCCATCTCTTCGTTGTCTTGTATCTTAGCTTACAAGGCAGGTTGATTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR CCA 90 bp | TTATACTTTCAGAAGGTTAGTTCATTATCATCATGGCAGGAAGCATaGTACCAGGCAGCAGGTATGGAGCTGAAAGCTTTAAATTTTGAT | + |
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Preference number: 1 (lower is better) Translates to: LYFQKVSSLSSWQEA*YQAAGMELKALNFD Trigger: ATCAAAATTTAAAGCTTTCAGCTCCATACCTGCTGCCTGGTACCATGCTTCCTGCCATGATGATAATGAACTAACCTTCTGAAAGTATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR CCA 90 bp | AATAACGAGAGTTCTGGGGACACAGCTCAATGGAGAATAAAAGGTTCTGCATTCGCCGGGAGAACTGCCTaGGAGTGGCTCAGCGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: NNESSGDTAQWRIKGSAFAGRTA*EWLSGS Trigger: TGACCCGCTGAGCCACTCCCAGGCAGTTCTCCCGGC...GAATGCAGAACCTTTTATTCTCCATTGAGCTGTGTCCCCAGAACTCTCGTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR TCA 90 bp | GACCAAGCATTCAAATACATGAGTGTATGGGGCCATTCTCATTCAAACCATCACAAACACAGCCGAGGGTaGGGCCACAGCCTGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: DQAFKYMSVWGHSHSNHHKHSRG*GHSLAQ Trigger: CTGTGCCAGGCTGTGGCCTCACCCTCGGCTGTGTTT...GTGATGGTTTGAATGAGAATGGCCCCATACACTCATGTATTTGAATGCTTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR GCA 90 bp | GACCAAGCATTCAAATACATGAGTGTATGGGGCCATTCTCATTCAAACCATCACAACTGCCGGGAGAACTaGCTGGGAGTGGCTCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: DQAFKYMSVWGHSHSNHHNCREN*LGVAQR Trigger: CCGCTGAGCCACTCCCAGGCAGTTCTCCCGGCAGTT...GTGATGGTTTGAATGAGAATGGCCCCATACACTCATGTATTTGAATGCTTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR TCA 90 bp | AATAACGAGAGTTCTGGGGACACAGCTCAATGGAGAATAAAAGGTTCTGCATTCAGCTCCCAGCAACAGTaGCAGGCACACGGGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: NNESSGDTAQWRIKGSAFSSQQQ*QAHGKQ Trigger: TTGCTTCCCGTGTGCCTGTCACTGTTGCTGGGAGCT...GAATGCAGAACCTTTTATTCTCCATTGAGCTGTGTCCCCAGAACTCTCGTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR CCA 90 bp | GCACCACTAAGATTAATGTTACAGGGGAACAGACAATACCAAGGAACAGACTGTTCATGGCAGGAAGCATaGTACCAGGCAGCAGGTATG | + |
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Preference number: 2 (lower is better) Translates to: APLRLMLQGNRQYQGTDCSWQEA*YQAAGM Trigger: CATACCTGCTGCCTGGTACCATGCTTCCTGCCATGA...ACAGTCTGTTCCTTGGTATTGTCTGTTCCCCTGTAACATTAATCTTAGTGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR TCA 90 bp | AATAACGAGAGTTCTGGGGACACAGCTCAATGGAGAATAAAAGGTTCTGCATTCGCTTTTAGGGCCATGTaGGTGAAGGTGACAGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: NNESSGDTAQWRIKGSAFAFRAM*VKVTVR Trigger: TCTCACTGTCACCTTCACTCACATGGCCCTAAAAGC...GAATGCAGAACCTTTTATTCTCCATTGAGCTGTGTCCCCAGAACTCTCGTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR TCA 90 bp | GCACCACTAAGATTAATGTTACAGGGGAACAGACAATACCAAGGAACAGACTGTTGTTGCTCAGGTTTATaGGGCCTGAATGAACGGCAG | + |
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Preference number: 2 (lower is better) Translates to: APLRLMLQGNRQYQGTDCCCSGL*GLNERQ Trigger: CTGCCGTTCATTCAGGCCTCATAAACCTGAGCAACA...ACAGTCTGTTCCTTGGTATTGTCTGTTCCCCTGTAACATTAATCTTAGTGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR CCA 90 bp | GACCAAGCATTCAAATACATGAGTGTATGGGGCCATTCTCATTCAAACCATCACACACTTCAGACACAGTaGGATCACTACCACCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: DQAFKYMSVWGHSHSNHHTLQTQ*DHYHLE Trigger: CTCTAGGTGGTAGTGATCCCACTGTGTCTGAAGTGT...GTGATGGTTTGAATGAGAATGGCCCCATACACTCATGTATTTGAATGCTTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR CCA 90 bp | AATAACGAGAGTTCTGGGGACACAGCTCAATGGAGAATAAAAGGTTCTGCATTCACAAGGACTTCTAGGTaGAGGCTACCTCAAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: NNESSGDTAQWRIKGSAFTRTSR*RLPQEK Trigger: TTTCTCTTGAGGTAGCCTCCACCTAGAAGTCCTTGT...GAATGCAGAACCTTTTATTCTCCATTGAGCTGTGTCCCCAGAACTCTCGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR GCA 90 bp | GCATTCAAATACATGAGTGTATGGGGCCATTCTCATTCAAACCATCACACCCAGTCACAGCAATGGCTGTaGATGTTACTACTATTAGCT | + |
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Preference number: 2 (lower is better) Translates to: AFKYMSVWGHSHSNHHTQSQQWL*MLLLLA Trigger: AGCTAATAGTAGTAACATGCACAGCCATTGCTGTGA...CTGGGTGTGATGGTTTGAATGAGAATGGCCCCATACACTCATGTATTTGAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR GCA 90 bp | TTCAGCACCACTAAGATTAATGTTACAGGGGAACAGACAATACCAAGGAACAGAAAAGAATCAAAAACATaGCAGGGGTGTGCTTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: FSTTKINVTGEQTIPRNRKESKT*QGCASV Trigger: CACCGAAGCACACCCCTGGCATGTTTTTGATTCTTT...TCTGTTCCTTGGTATTGTCTGTTCCCCTGTAACATTAATCTTAGTGGTGCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR GCA 90 bp | AATAACGAGAGTTCTGGGGACACAGCTCAATGGAGAATAAAAGGTTCTGCATTCCAGGTGAAGAGAAAGTaGTTAGGCACACTAAATCAC | + |
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Preference number: 2 (lower is better) Translates to: NNESSGDTAQWRIKGSAFQVKRK*LGTLNH Trigger: GTGATTTAGTGTGCCTAAGCACTTTCTCTTCACCTG...GAATGCAGAACCTTTTATTCTCCATTGAGCTGTGTCCCCAGAACTCTCGTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR CCA 90 bp | GCACCACTAAGATTAATGTTACAGGGGAACAGACAATACCAAGGAACAGACTGTAGTTCATTATCATCATaGCAGGAAGCATGGTACCAG | + |
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Preference number: 2 (lower is better) Translates to: APLRLMLQGNRQYQGTDCSSLSS*QEAWYQ Trigger: CTGGTACCATGCTTCCTGCCATGATGATAATGAACT...ACAGTCTGTTCCTTGGTATTGTCTGTTCCCCTGTAACATTAATCTTAGTGGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR TCA 90 bp | GCATTCAAATACATGAGTGTATGGGGCCATTCTCATTCAAACCATCACACCCAGGATATTGGCAGATACTaGCTTTACTACATTACAGTC | + |
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Preference number: 2 (lower is better) Translates to: AFKYMSVWGHSHSNHHTQDIGRY*LYYITV Trigger: GACTGTAATGTAGTAAAGTCAGTATCTGCCAATATC...CTGGGTGTGATGGTTTGAATGAGAATGGCCCCATACACTCATGTATTTGAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR TCA 90 bp | TTCAGCACCACTAAGATTAATGTTACAGGGGAACAGACAATACCAAGGAACAGAAAGCATTCAAATACATaGGTGTATGGGGCCATTCTC | + |
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Preference number: 2 (lower is better) Translates to: FSTTKINVTGEQTIPRNRKHSNT*VYGAIL Trigger: GAGAATGGCCCCATACACTCATGTATTTGAATGCTT...TCTGTTCCTTGGTATTGTCTGTTCCCCTGTAACATTAATCTTAGTGGTGCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAGCAGAAATAAGCAATTCACCCAACTTCTCAGAAAGTATGAGAGAAAATAAGACAACGAAGAGATaGGGGTCACAAGCACAGACT | + |
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Preference number: 2 (lower is better) Translates to: RGAEISNSPNFSESMRENKTTKR*GSQAQT Trigger: AGTCTGTGCTTGTGACCCCCATCTCTTCGTTGTCTT...ATTTTCTCTCATACTTTCTGAGAAGTTGGGTGAATTGCTTATTTCTGCTCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR CCA 90 bp | AATAACGAGAGTTCTGGGGACACAGCTCAATGGAGAATAAAAGGTTCTGCATTCATGTCTGATACTAAGTaGAGCATACTGGCTCATCAA | + |
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Preference number: 2 (lower is better) Translates to: NNESSGDTAQWRIKGSAFMSDTK*SILAHQ Trigger: TTGATGAGCCAGTATGCTCCACTTAGTATCAGACAT...GAATGCAGAACCTTTTATTCTCCATTGAGCTGTGTCCCCAGAACTCTCGTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR CCA 72 bp | CAGTCTGAACGAAGCAGGCCTGAGACACAGCAGGAGTaGCTGTCACAGTCACCACCCCAGGAATGTTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: QSERSRPETQQE*LSQSPPQECSA Trigger: TGCTGAACATTCCTGGGGTGGTGACTGTGACAGCCACTCCTGCTGTGTCTCAGGCCTGCTTCGTTCAGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR TCA 72 bp | CACTACCACCTAGAGTCCAGGAAACACAGCCGAGGGTaGGGCCACAGCCTGGCACAGTATTTATGGACAGAA | + |
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Preference number: 3 (lower is better) Translates to: HYHLESRKHSRG*GHSLAQYLWTE Trigger: TTCTGTCCATAAATACTGTGCCAGGCTGTGGCCTCACCCTCGGCTGTGTTTCCTGGACTCTAGGTGGTAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR TCA 72 bp | CTTACCCAGTACATCATGTCCAGCTCCCAGCAACAGTaGCAGGCACACGGGAAGCAAAGGTGCAGTCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: LTQYIMSSSQQQ*QAHGKQRCSLN Trigger: GTTCAGACTGCACCTTTGCTTCCCGTGTGCCTGTCACTGTTGCTGGGAGCTGGACATGATGTACTGGGTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR GCA 72 bp | TTTAAAATAAAAAGTGAGAGTGGCGTGTCCTCCGGGTaGTGTCAGCACAAGCACTGGCTGGGCTGGCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: FKIKSESGVSSG*CQHKHWLGWPS Trigger: GGAAGGCCAGCCCAGCCAGTGCTTGTGCTGACAGCACCCGGAGGACACGCCACTCTCACTTTTTATTTTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR CCA 72 bp | AGTCCAGGAAACACAGCCGAGGGTGAGGCCACAGCCTaGCACAGTATTTATGGACAGAAACGGCACACAACT | + |
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Preference number: 3 (lower is better) Translates to: SPGNTAEGEATA*HSIYGQKRHTT Trigger: AGTTGTGTGCCGTTTCTGTCCATAAATACTGTGCCAGGCTGTGGCCTCACCCTCGGCTGTGTTTCCTGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR GCA 72 bp | CACAGACAGGGTGAGTCTATGAAAGAATCAAAAACATaGCAGGGGTGTGCTTCGGTGGCAGAGCACTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: HRQGESMKESKT*QGCASVAEHLS Trigger: AGACAAGTGCTCTGCCACCGAAGCACACCCCTGGCATGTTTTTGATTCTTTCATAGACTCACCCTGTCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR TCA 72 bp | CGAGGACACTCAACAGCATTTGCTTTTAGGGCCATGTaGGTGAAGGTGACAGTGAGACACACTTCAGACACA | + |
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Preference number: 3 (lower is better) Translates to: RGHSTAFAFRAM*VKVTVRHTSDT Trigger: TGTGTCTGAAGTGTGTCTCACTGTCACCTTCACTCACATGGCCCTAAAAGCAAATGCTGTTGAGTGTCCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR CAA 90 bp | AATAACGAGAGTTCTGGGGACACAGCTCAATGGAGAATAAAAGGTTCTGCATTCCACCCAGACCTGAGGTaGTATCTGACAGGAGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: NNESSGDTAQWRIKGSAFHPDLR*YLTGGL Trigger: CAAACCTCCTGTCAGATACAACCTCAGGTCTGGGTG...GAATGCAGAACCTTTTATTCTCCATTGAGCTGTGTCCCCAGAACTCTCGTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR TCA 72 bp | CCAGGCAGCAGGTATGGAGCTGAAAGCTTTAAATTTTaGTCCATAGGCAGCAGGCAGAAAGATAACCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: PGSRYGAESFKF*SIGSRQKDNLK Trigger: CTTGAGGTTATCTTTCTGCCTGCTGCCTATGGATCAAAATTTAAAGCTTTCAGCTCCATACCTGCTGCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR CCA 72 bp | CAGAAGGTTAGTTCATTATCATCATGGCAGGAAGCATaGTACCAGGCAGCAGGTATGGAGCTGAAAGCTTTA | + |
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Preference number: 3 (lower is better) Translates to: QKVSSLSSWQEA*YQAAGMELKAL Trigger: TAAAGCTTTCAGCTCCATACCTGCTGCCTGGTACCATGCTTCCTGCCATGATGATAATGAACTAACCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR CCA 72 bp | GTGAAGAGAAAGTGCTTAGGCACACTAAATCACTGTTaGTTTATTAGACTGTGTGACTCGGGGGATAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: VKRKCLGTLNHC*FIRLCDSGDRD Trigger: GTCCCTATCCCCCGAGTCACACAGTCTAATAAACCAACAGTGATTTAGTGTGCCTAAGCACTTTCTCTTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR-3UTR CAA 90 bp | GACCAAGCATTCAAATACATGAGTGTATGGGGCCATTCTCATTCAAACCATCACGACACTCAACAGCATTaGCTTTTAGGGCCATGTGAG | + |
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Preference number: 3 (lower is better) Translates to: DQAFKYMSVWGHSHSNHHDTQQH*LLGPCE Trigger: CTCACATGGCCCTAAAAGCAAATGCTGTTGAGTGTC...GTGATGGTTTGAATGAGAATGGCCCCATACACTCATGTATTTGAATGCTTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR GCA 72 bp | TGTGCAGGGGAATATACTAGGCAGGTGAAGAGAAAGTaGTTAGGCACACTAAATCACTGTTGGTTTATTAGA | + |
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Preference number: 3 (lower is better) Translates to: CAGEYTRQVKRK*LGTLNHCWFIR Trigger: TCTAATAAACCAACAGTGATTTAGTGTGCCTAAGCACTTTCTCTTCACCTGCCTAGTATATTCCCCTGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR CCA 72 bp | CTGCCTTGTAAGCTAAGATACAAGACAACGAAGAGATaGGGGTCACAAGCACAGACTTACATTAACAAAAAC | + |
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Preference number: 3 (lower is better) Translates to: LPCKLRYKTTKR*GSQAQTYINKN Trigger: GTTTTTGTTAATGTAAGTCTGTGCTTGTGACCCCCATCTCTTCGTTGTCTTGTATCTTAGCTTACAAGGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR TCA 72 bp | AATAGTTCCATTAACAGGACCAAGCATTCAAATACATaGGTGTATGGGGCCATTCTCATTCAAACCATCACA | + |
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Preference number: 3 (lower is better) Translates to: NSSINRTKHSNT*VYGAILIQTIT Trigger: TGTGATGGTTTGAATGAGAATGGCCCCATACACTCATGTATTTGAATGCTTGGTCCTGTTAATGGAACTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR CCA 90 bp | GCACCACTAAGATTAATGTTACAGGGGAACAGACAATACCAAGGAACAGACTGTGCACATGGCTCAAGCTaGTCAGACAGTGGTTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: APLRLMLQGNRQYQGTDCAHGSS*SDSGCA Trigger: GGCGCAACCACTGTCTGACCAGCTTGAGCCATGTGC...ACAGTCTGTTCCTTGGTATTGTCTGTTCCCCTGTAACATTAATCTTAGTGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR CCA 90 bp | GCATTCAAATACATGAGTGTATGGGGCCATTCTCATTCAAACCATCACACCCAGCGGAATTCCACCACGTaGAGACCCTTCTTATCCGCC | + |
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Preference number: 4 (lower is better) Translates to: AFKYMSVWGHSHSNHHTQRNSTT*RPFLSA Trigger: GGCGGATAAGAAGGGTCTCCACGTGGTGGAATTCCG...CTGGGTGTGATGGTTTGAATGAGAATGGCCCCATACACTCATGTATTTGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR GCA 90 bp | TTCAGCACCACTAAGATTAATGTTACAGGGGAACAGACAATACCAAGGAACAGACTGCAAGCTACACAATaGAGGGAGACAGCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FSTTKINVTGEQTIPRNRLQATQ*RETACS Trigger: GCTGCAGGCTGTCTCCCTGCATTGTGTAGCTTGCAG...TCTGTTCCTTGGTATTGTCTGTTCCCCTGTAACATTAATCTTAGTGGTGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR GCA 90 bp | GCACCACTAAGATTAATGTTACAGGGGAACAGACAATACCAAGGAACAGACTGTTGGTCAGACAGTGGTTaGGCCTTGTTTCCCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: APLRLMLQGNRQYQGTDCWSDSG*ALFPWM Trigger: CATCCAGGGAAACAAGGCGCAACCACTGTCTGACCA...ACAGTCTGTTCCTTGGTATTGTCTGTTCCCCTGTAACATTAATCTTAGTGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR CCA 90 bp | AATAACGAGAGTTCTGGGGACACAGCTCAATGGAGAATAAAAGGTTCTGCATTCGGAGGCCGTAACCTCTaGGTTGTTTCTTCATCCGGA | + |
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Preference number: 4 (lower is better) Translates to: NNESSGDTAQWRIKGSAFGGRNL*VVSSSG Trigger: TCCGGATGAAGAAACAACCCAGAGGTTACGGCCTCC...GAATGCAGAACCTTTTATTCTCCATTGAGCTGTGTCCCCAGAACTCTCGTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR GCA 90 bp | GCATTCAAATACATGAGTGTATGGGGCCATTCTCATTCAAACCATCACACCCAGAAGAGCTGTCTTCACTaGCAAAAAGGAAGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AFKYMSVWGHSHSNHHTQKSCLH*QKGSGC Trigger: GCAGCCACTTCCTTTTTGGCAGTGAAGACAGCTCTT...CTGGGTGTGATGGTTTGAATGAGAATGGCCCCATACACTCATGTATTTGAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR CCA 90 bp | GACCAAGCATTCAAATACATGAGTGTATGGGGCCATTCTCATTCAAACCATCACCTGCCAAAAAGGAAGTaGCTGCTACTGGAAAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: DQAFKYMSVWGHSHSNHHLPKRK*LLLERR Trigger: ACGCCTTTCCAGTAGCAGCCACTTCCTTTTTGGCAG...GTGATGGTTTGAATGAGAATGGCCCCATACACTCATGTATTTGAATGCTTGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR CCA 90 bp | AGAGGAGCAGAAATAAGCAATTCACCCAACTTCTCAGAAAGTATGAGAGAAAATGCTTCAGTCCCTGCATaGCCTTCACGTCCTGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RGAEISNSPNFSESMRENASVPA*PSRPAS Trigger: ACTGGCAGGACGTGAAGGCCATGCAGGGACTGAAGC...ATTTTCTCTCATACTTTCTGAGAAGTTGGGTGAATTGCTTATTTCTGCTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR CAA 72 bp | AAAGCAGACCAACAAACGGAACACCCAGACCTGAGGTaGTATCTGACAGGAGGTTTGTATCTATACTACACA | + |
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Preference number: 4 (lower is better) Translates to: KADQQTEHPDLR*YLTGGLYLYYT Trigger: TGTGTAGTATAGATACAAACCTCCTGTCAGATACAACCTCAGGTCTGGGTGTTCCGTTTGTTGGTCTGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| 3UTR CAA 72 bp | GAACACCCAGACCTGAGGTTGTATCTGACAGGAGGTTaGTATCTATACTACACAACAAGAGCAATTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: EHPDLRLYLTGG*YLYYTTRAITA Trigger: AGCTGTAATTGCTCTTGTTGTGTAGTATAGATACAAACCTCCTGTCAGATACAACCTCAGGTCTGGGTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR GCA 90 bp | GACCAAGCATTCAAATACATGAGTGTATGGGGCCATTCTCATTCAAACCATCACTTTCCAGAGCTCTTCTaGAGTCAGTTTGGTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: DQAFKYMSVWGHSHSNHHFPELF*SQFGEE Trigger: TTCTTCACCAAACTGACTGCAGAAGAGCTCTGGAAA...GTGATGGTTTGAATGAGAATGGCCCCATACACTCATGTATTTGAATGCTTGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR GCA 90 bp | AGAGGAGCAGAAATAAGCAATTCACCCAACTTCTCAGAAAGTATGAGAGAAAATAATCGCTCGGTTCTTTaGCTTTCTGAAAGCGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RGAEISNSPNFSESMRENNRSVL*LSESVS Trigger: GGAGACGCTTTCAGAAAGGCAAAGAACCGAGCGATT...ATTTTCTCTCATACTTTCTGAGAAGTTGGGTGAATTGCTTATTTCTGCTCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR CCA 90 bp | GCACCACTAAGATTAATGTTACAGGGGAACAGACAATACCAAGGAACAGACTGTCTTAGGGAAATGTCATaGAATATTGTATGTCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: APLRLMLQGNRQYQGTDCLREMS*NIVCPS Trigger: CGAAGGACATACAATATTCCATGACATTTCCCTAAG...ACAGTCTGTTCCTTGGTATTGTCTGTTCCCCTGTAACATTAATCTTAGTGGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR CCA 90 bp | AATAACGAGAGTTCTGGGGACACAGCTCAATGGAGAATAAAAGGTTCTGCATTCTTACCTCAAGAATCCTaGTATCAAAGTCTTCATATG | + |
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Preference number: 4 (lower is better) Translates to: NNESSGDTAQWRIKGSAFLPQES*YQSLHM Trigger: CATATGAAGACTTTGATACCAGGATTCTTGAGGTAA...GAATGCAGAACCTTTTATTCTCCATTGAGCTGTGTCCCCAGAACTCTCGTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS CCA 90 bp | AGCGCTTCAGTCCCTGCATGGCCTTCACGTCCTGCCAGTCCAGCTTaGTATCAGGAACCTCAGGTTCCGGCTCCGGCTCCTTACTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: SASVPAWPSRPASPA*YQEPQVPAPAPYSR Trigger: CCTTGAGTAAGGAGCCGGAGCCGGAACCTGAGGTTCCTGATACCAAGCTGGACTGGCAGGACGTGAAGGCCATGCAGGGACTGAAGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS GCA 90 bp | TTAAACCACACAGAGCGCTTCAGTCCCTGCATGGCCTTCACGTCCTaGCAGTCCAGCTTGGTATCAGGAACCTCAGGTTCCGGCTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: LNHTERFSPCMAFTS*QSSLVSGTSGSGSG Trigger: GCCGGAGCCGGAACCTGAGGTTCCTGATACCAAGCTGGACTGGCAGGACGTGAAGGCCATGCAGGGACTGAAGCGCTCTGTGTGGTTTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR CAA 90 bp | GCCGAGGGTGAGGCCACAGCCTGGCACAGTATTTATGGACAGAAACGGCACACATCCTGCCAGTCCAGCTaGGTATCAGGAACCTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: AEGEATAWHSIYGQKRHTSCQSS*VSGTSG Trigger: ACCTGAGGTTCCTGATACCAAGCTGGACTGGCAGGA...TGTGTGCCGTTTCTGTCCATAAATACTGTGCCAGGCTGTGGCCTCACCCTCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS GCA 90 bp | TCTGAAAGCGTCTCCCCGGTCAGCAGCTTTCCCAATAGCAAAACCTaGAGCTCCATTTCCATTCCCAACAGCAACCAGGACTCGGACCGA | + |
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Preference number: 5 (lower is better) Translates to: SESVSPVSSFPNSKT*SSISIPNSNQDSDR Trigger: TCGGTCCGAGTCCTGGTTGCTGTTGGGAATGGAAATGGAGCTGCAGGTTTTGCTATTGGGAAAGCTGCTGACCGGGGAGACGCTTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS CCA 90 bp | ACGCAGCACTGTGTCTGTAGCACATGGCTCAAGCTGGTCAGACAGTaGTTGCGCCTTGTTTCCCTGGATGACAATGAGCCGTGGCTAAGA | + |
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Preference number: 5 (lower is better) Translates to: TQHCVCSTWLKLVRQ*LRLVSLDDNEPWLR Trigger: TCTTAGCCACGGCTCATTGTCATCCAGGGAAACAAGGCGCAACCACTGTCTGACCAGCTTGAGCCATGTGCTACAGACACAGTGCTGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028852.13 ENSMUST00000146131.2 |
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| CDS CCA 90 bp | GTCAGACAGTGGTTGCGCCTTGTTTCCCTGGATGACAATGAGCCGTaGCTAAGAGCTGTCTTCACTGCCAAAAAGGAAGTGGCTGCTACT | + |
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Preference number: 5 (lower is better) Translates to: VRQWLRLVSLDDNEP*LRAVFTAKKEVAAT Trigger: AGTAGCAGCCACTTCCTTTTTGGCAGTGAAGACAGCTCTTAGCCACGGCTCATTGTCATCCAGGGAAACAAGGCGCAACCACTGTCTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028852.13 ENSMUST00000146131.2 |
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| CDS-3UTR CAA 90 bp | TTCAGCACCACTAAGATTAATGTTACAGGGGAACAGACAATACCAAGGAACAGACTCGCATACATGTCCTaGATGCCGATGAGGCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: FSTTKINVTGEQTIPRNRLAYMS*MPMRRQ Trigger: CTGCCGCCTCATCGGCATCAAGGACATGTATGCGAG...TCTGTTCCTTGGTATTGTCTGTTCCCCTGTAACATTAATCTTAGTGGTGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR CAA 90 bp | TTCAGCACCACTAAGATTAATGTTACAGGGGAACAGACAATACCAAGGAACAGATGCCTCTGCCTTTTCTaGCTCCAGCTCCAGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: FSTTKINVTGEQTIPRNRCLCLF*LQLQSL Trigger: CAGAGACTGGAGCTGGAGCAAGAAAAGGCAGAGGCA...TCTGTTCCTTGGTATTGTCTGTTCCCCTGTAACATTAATCTTAGTGGTGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS-3UTR CAA 90 bp | AATAACGAGAGTTCTGGGGACACAGCTCAATGGAGAATAAAAGGTTCTGCATTCCGCTCCCTTTTAACTTaGATCTTCCTCTTCCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: NNESSGDTAQWRIKGSAFRSLLT*IFLFRS Trigger: GGACCGGAAGAGGAAGATCAAAGTTAAAAGGGAGCG...GAATGCAGAACCTTTTATTCTCCATTGAGCTGTGTCCCCAGAACTCTCGTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS GCA 72 bp | CCTAGACAGGAAATGACCTGCCTGCAAGCTACACAATaGAGGGAGACAGCCTGCAGCGCGTACGGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: PRQEMTCLQATQ*RETACSAYGRR Trigger: GCGGCGGCCGTACGCGCTGCAGGCTGTCTCCCTGCATTGTGTAGCTTGCAGGCAGGTCATTTCCTGTCTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS GCA 72 bp | AGAAGCTGTAGGGCCGGCACTGCTGGCCCGTCCAGTTaGCGGGAGAGGAAACGCAGCACTGTGTCTGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: RSCRAGTAGPSS*RERKRSTVSVA Trigger: TGCTACAGACACAGTGCTGCGTTTCCTCTCCCGGCAACTGGACGGGCCAGCAGTGCCGGCCCTACAGCTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028852.13 ENSMUST00000146131.2 |
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| CDS CAA 72 bp | AGTCCCTGCATGGCCTTCACGTCCTGCCAGTCCAGCTaGGTATCAGGAACCTCAGGTTCCGGCTCCGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPCMAFTSCQSS*VSGTSGSGSGS Trigger: GGAGCCGGAGCCGGAACCTGAGGTTCCTGATACCAAGCTGGACTGGCAGGACGTGAAGGCCATGCAGGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS CAA 90 bp | GAGCGCTTCAGTCCCTGCATGGCCTTCACGTCCTGCCAGTCCAGCTaGGTATCAGGAACCTCAGGTTCCGGCTCCGGCTCCTTACTCAAG | + |
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Preference number: 6 (lower is better) Translates to: ERFSPCMAFTSCQSS*VSGTSGSGSGSLLK Trigger: CTTGAGTAAGGAGCCGGAGCCGGAACCTGAGGTTCCTGATACCAAGCTGGACTGGCAGGACGTGAAGGCCATGCAGGGACTGAAGCGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS GCA 72 bp | ACAGAGCGCTTCAGTCCCTGCATGGCCTTCACGTCCTaGCAGTCCAGCTTGGTATCAGGAACCTCAGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: TERFSPCMAFTS*QSSLVSGTSGS Trigger: GGAACCTGAGGTTCCTGATACCAAGCTGGACTGGCAGGACGTGAAGGCCATGCAGGGACTGAAGCGCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS TCA 72 bp | GGAAAGGCGTTTAAAGAGAGTTGCCTAGACAGGAAATaGCCTGCACCCCCTGCCGTCCTTGCTGGTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GKAFKESCLDRK*PAPPAVLAGPS Trigger: GGAAGGACCAGCAAGGACGGCAGGGGGTGCAGGTCATTTCCTGTCTAGGCAACTCTCTTTAAACGCCTTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146131.2 |
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| CDS GCA 72 bp | TCTGTAGCACATGGCTCAAGCTGGTCAGACAGTGGTTaGGCCTTGTTTCCCTGGATGACAATGAGCCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SVAHGSSWSDSG*ALFPWMTMSRG Trigger: GCCACGGCTCATTGTCATCCAGGGAAACAAGGCGCAACCACTGTCTGACCAGCTTGAGCCATGTGCTACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028852.13 ENSMUST00000146131.2 |
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| CDS CAA 90 bp | CAGCACTGTGTCTGTAGCACATGGCTCAAGCTGGTCAGACAGTGGTaGCGCCTTGTTTCCCTGGATGACAATGAGCCGTGGCTAAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: QHCVCSTWLKLVRQW*RLVSLDDNEPWLRA Trigger: AGCTCTTAGCCACGGCTCATTGTCATCCAGGGAAACAAGGCGCAACCACTGTCTGACCAGCTTGAGCCATGTGCTACAGACACAGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028852.13 ENSMUST00000146131.2 |
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| CDS GCA 72 bp | GTCTCCCCGGTCAGCAGCTTTCCCAATAGCAAAACCTaGAGCTCCATTTCCATTCCCAACAGCAACCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: VSPVSSFPNSKT*SSISIPNSNQD Trigger: GTCCTGGTTGCTGTTGGGAATGGAAATGGAGCTGCAGGTTTTGCTATTGGGAAAGCTGCTGACCGGGGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS CCA 72 bp | TGGTTGCGCCTTGTTTCCCTGGATGACAATGAGCCGTaGCTAAGAGCTGTCTTCACTGCCAAAAAGGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: WLRLVSLDDNEP*LRAVFTAKKEV Trigger: CACTTCCTTTTTGGCAGTGAAGACAGCTCTTAGCCACGGCTCATTGTCATCCAGGGAAACAAGGCGCAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028852.13 ENSMUST00000146131.2 |
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| CDS CCA 72 bp | TTCTGCTGCTCCTCTTTGCTTCTCTGGCCGATGTTCTaGACGACCCCACTTTTTATCAGAGGAACGTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FCCSSLLLWPMF*TTPLFIRGTFK Trigger: TTTGAACGTTCCTCTGATAAAAAGTGGGGTCGTCCAGAACATCGGCCAGAGAAGCAAAGAGGAGCAGCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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| CDS GCA 72 bp | TTCTATGTAATGCAAATAATGAATCGCTCGGTTCTTTaGCTTTCTGAAAGCGTCTCCCCGGTCAGCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: FYVMQIMNRSVL*LSESVSPVSSF Trigger: AAAGCTGCTGACCGGGGAGACGCTTTCAGAAAGGCAAAGAACCGAGCGATTCATTATTTGCATTACATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028852.13 |
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