Pregenerated sensors for MRPS34 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038880Ensembl transcript IDs: ENSMUST00000043907.14, ENSMUST00000154236.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCACATTTGAGCCCAAAGCGCAGTCTCGGCGCCCAAGTCCTGCCTaGGTGTGCGGGAGCACCTGCTGCTCTGCTCCATACCGCCACCTT | + |
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Preference number: 1 (lower is better) Translates to: STFEPKAQSRRPSPA*VCGSTCCSAPYRHL Trigger: AAGGTGGCGGTATGGAGCAGAGCAGCAGGTGCTCCCGCACACTCAGGCAGGACTTGGGCGCCGAGACTGCGCTTTGGGCTCAAATGTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCATGCAGAAATCCCCACGGATCGTACCGGGCATGGCGTCCCCTGGGTCAGTCGCCCAAGTCCTGCCTaGGTGTGCGGGAGCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: LHAEIPTDRTGHGVPWVSRPSPA*VCGSTC Trigger: GCAGGTGCTCCCGCACACTCAGGCAGGACTTGGGCG...ACTGACCCAGGGGACGCCATGCCCGGTACGATCCGTGGGGATTTCTGCATGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTCAGCACCAGACAGATCATGGCGGCGGATGGGGCGGGCCAAGCGGCAAGGGGCTCTCCTGGGGCTCTaGAATCCCAGCACATTTGAG | + |
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Preference number: 2 (lower is better) Translates to: WSAPDRSWRRMGRAKRQGALLGL*NPSTFE Trigger: CTCAAATGTGCTGGGATTGCAGAGCCCCAGGAGAGC...CCCTTGCCGCTTGGCCCGCCCCATCCGCCGCCATGATCTGTCTGGTGCTGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCATGCAGAAATCCCCACGGATCGTACCGGGCATGGCGTCCCCTGGGTCAGTTCAGTGCCACCAGCTTaGAGCCCTTCCTCTCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LHAEIPTDRTGHGVPWVSSVPPA*SPSSQS Trigger: GCTTTGAGAGGAAGGGCTTCAAGCTGGTGGCACTGA...ACTGACCCAGGGGACGCCATGCCCGGTACGATCCGTGGGGATTTCTGCATGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTCAGCACCAGACAGATCATGGCGGCGGATGGGGCGGGCCAAGCGGCAAGGGTGCCCCATTATTCATTaGCTGATGTGTCAGGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: WSAPDRSWRRMGRAKRQGCPIIH*LMCQGC Trigger: ACAGCCCTGACACATCAGGCAATGAATAATGGGGCA...CCCTTGCCGCTTGGCCCGCCCCATCCGCCGCCATGATCTGTCTGGTGCTGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCAACCTCCATGCAGAAATCCCCACGGATCGTACCGGGCATGGCGTCCCCCACTCGTCCATCAAATaGCTCACAGGACCTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LANLHAEIPTDRTGHGVPHSSIK*LTGPLC Trigger: GCAGAGAGGTCCTGTGAGTCATTTGATGGACGAGTG...GGGGACGCCATGCCCGGTACGATCCGTGGGGATTTCTGCATGGAGGTTGGCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGCACTCGTCCATCAAATaGCTCACAGGACCTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SRPRNQRGARLKMTPSSLHSSIK*LTGPLC Trigger: GCAGAGAGGTCCTGTGAGTCATTTGATGGACGAGTG...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCTGCCTGAGTGTGCGGGAGCACCTGCTGCTCTGCTCCATACCGCCACCTTTAAGCAGCCTGTCATCTaGCCCATTATTCATTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VLPECAGAPAALLHTATFKQPVI*PIIHCL Trigger: CAGGCAATGAATAATGGGGCAGATGACAGGCTGCTT...AAAGGTGGCGGTATGGAGCAGAGCAGCAGGTGCTCCCGCACACTCAGGCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGCCATTATTCATTGCCTaGTGTGTCAGGGCTGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: SRPRNQRGARLKMTPSSLPLFIA*CVRAVG Trigger: TCCTACAGCCCTGACACATCAGGCAATGAATAATGG...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGTGCCCCATTATTCATTaGCTGATGTGTCAGGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SRPRNQRGARLKMTPSSLCPIIH*LMCQGC Trigger: ACAGCCCTGACACATCAGGCAATGAATAATGGGGCA...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCATGCAGAAATCCCCACGGATCGTACCGGGCATGGCGTCCCCTGGGTCAGTTTTCCTCCCTTGTCCTaGGGTACACATGTAATGAAA | + |
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Preference number: 2 (lower is better) Translates to: LHAEIPTDRTGHGVPWVSFPPLS*GTHVMK Trigger: TTTCATTACATGTGTACCGCAGGACAAGGGAGGAAA...ACTGACCCAGGGGACGCCATGCCCGGTACGATCCGTGGGGATTTCTGCATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCATGAATTACATTCTTGCCAACCTCCATGCAGAAATCCCCACGGATCGTACCCATTATTCATTGCCTaGTGTGTCAGGGCTGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: CHELHSCQPPCRNPHGSYPLFIA*CVRAVG Trigger: TCCTACAGCCCTGACACATCAGGCAATGAATAATGG...GTACGATCCGTGGGGATTTCTGCATGGAGGTTGGCAAGAATGTAATTCATGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR CAA 90 bp | GATGCTGAGCTCTGTGAAGATCACAGAAGACCAACAACCTCCAGATaGGTAATGCTGACTGCAATAACATCTACTCATATAGCCAATGTC | + |
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Preference number: 2 (lower is better) Translates to: DAELCEDHRRPTTSR*VMLTAITSTHIANV Trigger: GACATTGGCTATATGAGTAGATGTTATTGCAGTCAGCATTACCAATCTGGAGGTTGTTGGTCTTCTGTGATCTTCACAGAGCTCAGCATC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR TCA 72 bp | GAGCCCAAAGCGCAGTCTCGGCGCCCAAGTCCTGCCTaGGTGTGCGGGAGCACCTGCTGCTCTGCTCCATAC | + |
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Preference number: 3 (lower is better) Translates to: EPKAQSRRPSPA*VCGSTCCSAPY Trigger: GTATGGAGCAGAGCAGCAGGTGCTCCCGCACACTCAGGCAGGACTTGGGCGCCGAGACTGCGCTTTGGGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR TCA 72 bp | GCGGGCTCTCCTGGGGCTCTGCAATCCCAGCACATTTaGGCCCAAAGCGCAGTCTCGGCGCCCAAGTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: AGSPGALQSQHI*AQSAVSAPKSC Trigger: GCAGGACTTGGGCGCCGAGACTGCGCTTTGGGCTCAAATGTGCTGGGATTGCAGAGCCCCAGGAGAGCCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR GCA 72 bp | CCTGGGTCAGTGGCCCCTATGAGGGCTCGCGAAGCATaGACGACATCCAGCCCTTGCCACACCATGGCCACC | + |
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Preference number: 3 (lower is better) Translates to: PGSVAPMRAREA*TTSSPCHTMAT Trigger: GGTGGCCATGGTGTGGCAAGGGCTGGATGTCGTGCATGCTTCGCGAGCCCTCATAGGGGCCACTGACCCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR GCA 72 bp | TTAAAGGACCTCTTGGCGCGGGCTCTCCTGGGGCTCTaGAATCCCAGCACATTTGAGCCCAAAGCGCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: LKDLLARALLGL*NPSTFEPKAQS Trigger: AGACTGCGCTTTGGGCTCAAATGTGCTGGGATTGCAGAGCCCCAGGAGAGCCCGCGCCAAGAGGTCCTTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR-3UTR CAA 90 bp | CACACAGCACTGTTACTGATGCTGAGCTCTGTGAAGATCACAGAAGACCAACAACCCTTAAAGGACCTCTaGGCGCGGGCTCTCCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: HTALLLMLSSVKITEDQQPLKDL*ARALLG Trigger: CCCCAGGAGAGCCCGCGCCAAGAGGTCCTTTAAGGG...TTGTTGGTCTTCTGTGATCTTCACAGAGCTCAGCATCAGTAACAGTGCTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR GCA 72 bp | GGCCCGCCTGAAAATGACACCAAGCAGCCTGTCATCTaGCCCATTATTCATTGCCTGATGTGTCAGGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: GPPENDTKQPVI*PIIHCLMCQGC Trigger: ACAGCCCTGACACATCAGGCAATGAATAATGGGGCAGATGACAGGCTGCTTGGTGTCATTTTCAGGCGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| 3UTR GCA 72 bp | GCTCTGCTCCATACCGCCACCTTTCCTCCCTTGTCCTaGGGTACACATGTAATGAAACCACAACACAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: ALLHTATFPPLS*GTHVMKPQHRL Trigger: CAGCCTGTGTTGTGGTTTCATTACATGTGTACCGCAGGACAAGGGAGGAAAGGTGGCGGTATGGAGCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR TCA 72 bp | CCAAGCAGCCTGTCATCTGCCCCATTATTCATTGCCTaGTGTGTCAGGGCTGTAGGATATAACTCGCCACCG | + |
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Preference number: 3 (lower is better) Translates to: PSSLSSAPLFIA*CVRAVGYNSPP Trigger: CGGTGGCGAGTTATATCCTACAGCCCTGACACATCAGGCAATGAATAATGGGGCAGATGACAGGCTGCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| 3UTR GCA 72 bp | CAGAAGACCAACAACCTCCAGATTGGTAATGCTGACTaGAATAACATCTACTCATATAGCCAATGTCCGGCG | + |
|
Preference number: 3 (lower is better) Translates to: QKTNNLQIGNAD*NNIYSYSQCPA Trigger: CGCCGGACATTGGCTATATGAGTAGATGTTATTGCAGTCAGCATTACCAATCTGGAGGTTGTTGGTCTTCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| CDS-3UTR TCA 90 bp | CTTGCCAACCTCCATGCAGAAATCCCCACGGATCGTACCGGGCATGGCGTCCCCCGGGCCTCACACGCGTaGGGCGCCAGTAGCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: LANLHAEIPTDRTGHGVPRASHA*GASSMA Trigger: AGCCATGCTACTGGCGCCTCACGCGTGTGAGGCCCG...GGGGACGCCATGCCCGGTACGATCCGTGGGGATTTCTGCATGGAGGTTGGCAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| 3UTR CAA 72 bp | CGCGGGCTCTCCTGGGGCTCTGCAATCCCAGCACATTaGAGCCCAAAGCGCAGTCTCGGCGCCCAAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RGLSWGSAIPAH*SPKRSLGAQVL Trigger: CAGGACTTGGGCGCCGAGACTGCGCTTTGGGCTCAAATGTGCTGGGATTGCAGAGCCCCAGGAGAGCCCGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| CDS-3UTR TCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGCGGGCCTCACACGCGTaGGGCGCCAGTAGCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: SRPRNQRGARLKMTPSSLRASHA*GASSMA Trigger: AGCCATGCTACTGGCGCCTCACGCGTGTGAGGCCCG...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR CCA 90 bp | CTCCATGCAGAAATCCCCACGGATCGTACCGGGCATGGCGTCCCCTGGGTCAGTGAGGCGCCAGTAGCATaGCTCGTCGTGCTGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LHAEIPTDRTGHGVPWVSEAPVA*LVVLPQ Trigger: CTGTGGCAGCACGACGAGCCATGCTACTGGCGCCTC...ACTGACCCAGGGGACGCCATGCCCGGTACGATCCGTGGGGATTTCTGCATGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| CDS-3UTR CCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGCCCCAGGCCCTCCCGTaGTCCAAGTTCTGCGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: SRPRNQRGARLKMTPSSLPQALP*SKFCAV Trigger: CACGGCGCAGAACTTGGACCACGGGAGGGCCTGGGG...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCTCCTGGGGCTCTGCAATCCCAGCACATTTGAGCCCAAAGCGCAGTCTCCATGGCTCGTCGTGCTaGCACAGCCAGGACTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: GLSWGSAIPAHLSPKRSLHGSSC*HSQDLR Trigger: CCGCAAGTCCTGGCTGTGGCAGCACGACGAGCCATG...GAGACTGCGCTTTGGGCTCAAATGTGCTGGGATTGCAGAGCCCCAGGAGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| CDS-3UTR GCA 90 bp | CCAAAGCGCAGTCTCGGCGCCCAAGTCCTGCCTGAGTGTGCGGGAGCACCTGCTAAGGCCTCCTCCTCGTaGTTGGGTACCAAACGCCAA | + |
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Preference number: 4 (lower is better) Translates to: PKRSLGAQVLPECAGAPAKASSS*LGTKRQ Trigger: TTGGCGTTTGGTACCCAAGCACGAGGAGGAGGCCTT...AGCAGGTGCTCCCGCACACTCAGGCAGGACTTGGGCGCCGAGACTGCGCTTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| CDS-3UTR CCA 90 bp | CCAAAGCGCAGTCTCGGCGCCCAAGTCCTGCCTGAGTGTGCGGGAGCACCTGCTCCTCCTCCTCGTGCTTaGGTACCAAACGCCAATCGT | + |
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Preference number: 4 (lower is better) Translates to: PKRSLGAQVLPECAGAPAPPPRA*VPNANR Trigger: ACGATTGGCGTTTGGTACCCAAGCACGAGGAGGAGG...AGCAGGTGCTCCCGCACACTCAGGCAGGACTTGGGCGCCGAGACTGCGCTTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| CDS-3UTR GCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGCATGGCTCGTCGTGCTaGCACAGCCAGGACTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: SRPRNQRGARLKMTPSSLHGSSC*HSQDLR Trigger: CCGCAAGTCCTGGCTGTGGCAGCACGACGAGCCATG...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR CCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGGAGGCGCCAGTAGCATaGCTCGTCGTGCTGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: SRPRNQRGARLKMTPSSLEAPVA*LVVLPQ Trigger: CTGTGGCAGCACGACGAGCCATGCTACTGGCGCCTC...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR CCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGAGACTGGGGTGCCCTTaGCCCTCCCTTTCGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SRPRNQRGARLKMTPSSLRLGCP*PSLSSP Trigger: AGGAGACGAAAGGGAGGGCCAAGGGCACCCCAGTCT...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR TCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGCCTCACTCTTCCCTTTaGAAGTCAGGATGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SRPRNQRGARLKMTPSSLPHSSL*KSGCPR Trigger: CCTGGGGCATCCTGACTTTCAAAGGGAAGAGTGAGG...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR TCA 90 bp | ACTCATATAGCCAATGTCCGGCGCTGTCCTCCCAGCACAGAAGCTCGGCCTCACCCTCACTCTTCCCTTTaGAAGTCAGGATGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: THIANVRRCPPSTEARPHPHSSL*KSGCPR Trigger: CCTGGGGCATCCTGACTTTCAAAGGGAAGAGTGAGG...GTGAGGCCGAGCTTCTGTGCTGGGAGGACAGCGCCGGACATTGGCTATATGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| CDS-3UTR GCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGAAGGCCTCCTCCTCGTaGTTGGGTACCAAACGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SRPRNQRGARLKMTPSSLKASSS*LGTKRQ Trigger: TTGGCGTTTGGTACCCAAGCACGAGGAGGAGGCCTT...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR CCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGCCTCCTCCTCGTGCTTaGGTACCAAACGCCAATCGT | + |
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Preference number: 4 (lower is better) Translates to: SRPRNQRGARLKMTPSSLPPPRA*VPNANR Trigger: ACGATTGGCGTTTGGTACCCAAGCACGAGGAGGAGG...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR CCA 90 bp | CACACAGCACTGTTACTGATGCTGAGCTCTGTGAAGATCACAGAAGACCAACAACCCCAGGCCCTCCCGTaGTCCAAGTTCTGCGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: HTALLLMLSSVKITEDQQPQALP*SKFCAV Trigger: CACGGCGCAGAACTTGGACCACGGGAGGGCCTGGGG...TTGTTGGTCTTCTGTGATCTTCACAGAGCTCAGCATCAGTAACAGTGCTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| CDS-3UTR CCA 90 bp | GTCCTGCCTGAGTGTGCGGGAGCACCTGCTGCTCTGCTCCATACCGCCACCTTTATTCAATCTGTCCTCTaGTTTCGCAGTGAACGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VLPECAGAPAALLHTATFIQSVL*FRSERS Trigger: ACTGCGTTCACTGCGAAACCAGAGGACAGATTGAAT...AAAGGTGGCGGTATGGAGCAGAGCAGCAGGTGCTCCCGCACACTCAGGCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| CDS-3UTR CCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGACCAAACGCCAATCGTaGTACATGACTTGCTCGATT | + |
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Preference number: 4 (lower is better) Translates to: SRPRNQRGARLKMTPSSLTKRQS*YMTCSI Trigger: AATCGAGCAAGTCATGTACCACGATTGGCGTTTGGT...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR CCA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGATTCAATCTGTCCTCTaGTTTCGCAGTGAACGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SRPRNQRGARLKMTPSSLIQSVL*FRSERS Trigger: ACTGCGTTCACTGCGAAACCAGAGGACAGATTGAAT...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS CCA 90 bp | CTGCGCCGTGTAGTCGGGCCTCACACGCGTGAGGCGCCAGTAGCATaGCTCGTCGTGCTGCCACAGCCAGGACTTGCGGGTAACCAGACG | + |
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Preference number: 5 (lower is better) Translates to: LRRVVGPHTREAPVA*LVVLPQPGLAGNQT Trigger: CGTCTGGTTACCCGCAAGTCCTGGCTGTGGCAGCACGACGAGCCATGCTACTGGCGCCTCACGCGTGTGAGGCCCGACTACACGGCGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS TCA 90 bp | TCCCGTGGTCCAAGTTCTGCGCCGTGTAGTCGGGCCTCACACGCGTaGGGCGCCAGTAGCATGGCTCGTCGTGCTGCCACAGCCAGGACT | + |
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Preference number: 5 (lower is better) Translates to: SRGPSSAPCSRASHA*GASSMARRAATART Trigger: AGTCCTGGCTGTGGCAGCACGACGAGCCATGCTACTGGCGCCTCACGCGTGTGAGGCCCGACTACACGGCGCAGAACTTGGACCACGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR CAA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGTGCCACAGCCAGGACTaGCGGGTAACCAGACGGCCC | + |
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Preference number: 5 (lower is better) Translates to: SRPRNQRGARLKMTPSSLCHSQD*RVTRRP Trigger: GGGCCGTCTGGTTACCCGCAAGTCCTGGCTGTGGCA...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR CAA 90 bp | GTCCTGCCTGAGTGTGCGGGAGCACCTGCTGCTCTGCTCCATACCGCCACCTTTGCCTCCTCCTCGTGCTaGGGTACCAAACGCCAATCG | + |
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Preference number: 5 (lower is better) Translates to: VLPECAGAPAALLHTATFASSSC*GTKRQS Trigger: CGATTGGCGTTTGGTACCCAAGCACGAGGAGGAGGC...AAAGGTGGCGGTATGGAGCAGAGCAGCAGGTGCTCCCGCACACTCAGGCAGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| CDS CCA 90 bp | GGCGCATTCGAGTCCTCTCCAGGTTCAGGAGCGGCTCCTGGACGCTaGTATCCCCGTTTTTCTGCCGTTCAGCGAGGATCATGGCTCGCA | + |
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Preference number: 5 (lower is better) Translates to: GAFESSPGSGAAPGR*YPRFSAVQRGSWLA Trigger: TGCGAGCCATGATCCTCGCTGAACGGCAGAAAAACGGGGATACCAGCGTCCAGGAGCCGCTCCTGAACCTGGAGAGGACTCGAATGCGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR CAA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGGCCTCCTCCTCGTGCTaGGGTACCAAACGCCAATCG | + |
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Preference number: 5 (lower is better) Translates to: SRPRNQRGARLKMTPSSLASSSC*GTKRQS Trigger: CGATTGGCGTTTGGTACCCAAGCACGAGGAGGAGGC...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS CCA 90 bp | GGCTCGCAGCAGAGGTGGATAGGGGACAGAATTCAATCTGTCCTCTaGTTTCGCAGTGAACGCAGTGAAGGCCTCCTCCTCGTGCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: GSQQRWIGDRIQSVL*FRSERSEGLLLVLG Trigger: CCCAAGCACGAGGAGGAGGCCTTCACTGCGTTCACTGCGAAACCAGAGGACAGATTGAATTCTGTCCCCTATCCACCTCTGCTGCGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR CAA 90 bp | TCCAGACCGAGGAATCAGAGAGGGGCCCGCCTGAAAATGACACCAAGCAGCCTGTCCTCACTCTTCCCTTaGAAAGTCAGGATGCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: SRPRNQRGARLKMTPSSLSSLFP*KVRMPQ Trigger: CTGGGGCATCCTGACTTTCAAAGGGAAGAGTGAGGA...CAGGCTGCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS CCA 90 bp | GCAGTGAAGGCCTCCTCCTCGTGCTTGGGTACCAAACGCCAATCGTaGTACATGACTTGCTCGATTTCCCGAGCCGTATCCTCACTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AVKASSSCLGTKRQS*YMTCSISRAVSSLF Trigger: GAAGAGTGAGGATACGGCTCGGGAAATCGAGCAAGTCATGTACCACGATTGGCGTTTGGTACCCAAGCACGAGGAGGAGGCCTTCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS-3UTR CAA 90 bp | TGCCATGAATTACATTCTTGCCAACCTCCATGCAGAAATCCCCACGGATCGTACTGCCACAGCCAGGACTaGCGGGTAACCAGACGGCCC | + |
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Preference number: 5 (lower is better) Translates to: CHELHSCQPPCRNPHGSYCHSQD*RVTRRP Trigger: GGGCCGTCTGGTTACCCGCAAGTCCTGGCTGTGGCA...GTACGATCCGTGGGGATTTCTGCATGGAGGTTGGCAAGAATGTAATTCATGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154236.2 |
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| CDS GCA 90 bp | CTGTCCTCTGGTTTCGCAGTGAACGCAGTGAAGGCCTCCTCCTCGTaGTTGGGTACCAAACGCCAATCGTGGTACATGACTTGCTCGATT | + |
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Preference number: 5 (lower is better) Translates to: LSSGFAVNAVKASSS*LGTKRQSWYMTCSI Trigger: AATCGAGCAAGTCATGTACCACGATTGGCGTTTGGTACCCAAGCACGAGGAGGAGGCCTTCACTGCGTTCACTGCGAAACCAGAGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS GCA 90 bp | TCCTCCTCGTGCTTGGGTACCAAACGCCAATCGTGGTACATGACTTaGTCGATTTCCCGAGCCGTATCCTCACTCTTCCCTTTGAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: SSSCLGTKRQSWYMT*SISRAVSSLFPLKV Trigger: GACTTTCAAAGGGAAGAGTGAGGATACGGCTCGGGAAATCGAGCAAGTCATGTACCACGATTGGCGTTTGGTACCCAAGCACGAGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS CCA 72 bp | GTAGTCGGGCCTCACACGCGTGAGGCGCCAGTAGCATaGCTCGTCGTGCTGCCACAGCCAGGACTTGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: VVGPHTREAPVA*LVVLPQPGLAG Trigger: ACCCGCAAGTCCTGGCTGTGGCAGCACGACGAGCCATGCTACTGGCGCCTCACGCGTGTGAGGCCCGACTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS TCA 72 bp | CCAAGTTCTGCGCCGTGTAGTCGGGCCTCACACGCGTaGGGCGCCAGTAGCATGGCTCGTCGTGCTGCCACA | + |
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Preference number: 6 (lower is better) Translates to: PSSAPCSRASHA*GASSMARRAAT Trigger: TGTGGCAGCACGACGAGCCATGCTACTGGCGCCTCACGCGTGTGAGGCCCGACTACACGGCGCAGAACTTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS CCA 72 bp | GCCTCCTCCTCGTGCTTGGGTACCAAACGCCAATCGTaGTACATGACTTGCTCGATTTCCCGAGCCGTATCC | + |
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Preference number: 6 (lower is better) Translates to: ASSSCLGTKRQS*YMTCSISRAVS Trigger: GGATACGGCTCGGGAAATCGAGCAAGTCATGTACCACGATTGGCGTTTGGTACCCAAGCACGAGGAGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS GCA 72 bp | GGTTTCGCAGTGAACGCAGTGAAGGCCTCCTCCTCGTaGTTGGGTACCAAACGCCAATCGTGGTACATGACT | + |
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Preference number: 6 (lower is better) Translates to: GFAVNAVKASSS*LGTKRQSWYMT Trigger: AGTCATGTACCACGATTGGCGTTTGGTACCCAAGCACGAGGAGGAGGCCTTCACTGCGTTCACTGCGAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS CAA 72 bp | TTCGCAGTGAACGCAGTGAAGGCCTCCTCCTCGTGCTaGGGTACCAAACGCCAATCGTGGTACATGACTTGC | + |
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Preference number: 6 (lower is better) Translates to: FAVNAVKASSSC*GTKRQSWYMTC Trigger: GCAAGTCATGTACCACGATTGGCGTTTGGTACCCAAGCACGAGGAGGAGGCCTTCACTGCGTTCACTGCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS CAA 90 bp | TCCTCTGGTTTCGCAGTGAACGCAGTGAAGGCCTCCTCCTCGTGCTaGGGTACCAAACGCCAATCGTGGTACATGACTTGCTCGATTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSGFAVNAVKASSSC*GTKRQSWYMTCSIS Trigger: GGAAATCGAGCAAGTCATGTACCACGATTGGCGTTTGGTACCCAAGCACGAGGAGGAGGCCTTCACTGCGTTCACTGCGAAACCAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS TCA 72 bp | CCTCGTGCTTGGGTACCAAACGCCAATCGTGGTACATaGCTTGCTCGATTTCCCGAGCCGTATCCTCACTCT | + |
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Preference number: 6 (lower is better) Translates to: PRAWVPNANRGT*LARFPEPYPHS Trigger: AGAGTGAGGATACGGCTCGGGAAATCGAGCAAGTCATGTACCACGATTGGCGTTTGGTACCCAAGCACGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS CAA 72 bp | GTGCTTGGGTACCAAACGCCAATCGTGGTACATGACTaGCTCGATTTCCCGAGCCGTATCCTCACTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: VLGYQTPIVVHD*LDFPSRILTLP Trigger: GGGAAGAGTGAGGATACGGCTCGGGAAATCGAGCAAGTCATGTACCACGATTGGCGTTTGGTACCCAAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS GCA 72 bp | TGCTTGGGTACCAAACGCCAATCGTGGTACATGACTTaGTCGATTTCCCGAGCCGTATCCTCACTCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: CLGTKRQSWYMT*SISRAVSSLFP Trigger: AGGGAAGAGTGAGGATACGGCTCGGGAAATCGAGCAAGTCATGTACCACGATTGGCGTTTGGTACCCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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| CDS CAA 90 bp | CTCCTCCTCGTGCTTGGGTACCAAACGCCAATCGTGGTACATGACTaGCTCGATTTCCCGAGCCGTATCCTCACTCTTCCCTTTGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: LLLVLGYQTPIVVHD*LDFPSRILTLPFES Trigger: ACTTTCAAAGGGAAGAGTGAGGATACGGCTCGGGAAATCGAGCAAGTCATGTACCACGATTGGCGTTTGGTACCCAAGCACGAGGAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043907.14 ENSMUST00000154236.2 |
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