Pregenerated sensors for MRPS30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021731Ensembl transcript IDs: ENSMUST00000022245.10
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | ATTCCCAGGACCCAACCTGTAGCTCTAGCAGTAACTCCAGGGTTCTaGTGCCCTCTCCTGGTCTCTACAGGCACTGCACCCACAATGTAC | + |
Preference number: 1 (lower is better) Translates to: IPRTQPVALAVTPGF*CPLLVSTGTAPTMY Trigger: GTACATTGTGGGTGCAGTGCCTGTAGAGACCAGGAGAGGGCAGCAGAACCCTGGAGTTACTGCTAGAGCTACAGGTTGGGTCCTGGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR CAA 90 bp | GGCTCAGTGATTAAGAACACTGGTTGCTCTTCCAGAACACCTAGTTaGATTCCCAGGACCCAACCTGTAGCTCTAGCAGTAACTCCAGGG | + |
Preference number: 2 (lower is better) Translates to: GSVIKNTGCSSRTPS*IPRTQPVALAVTPG Trigger: CCCTGGAGTTACTGCTAGAGCTACAGGTTGGGTCCTGGGAATCAAACTAGGTGTTCTGGAAGAGCAACCAGTGTTCTTAATCACTGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR-3UTR CCA 90 bp | ACCCAACCTGTAGCTCTAGCAGTAACTCCAGGGTTCTGCTGCCCTCTCCTGGTCAAACATTCACTGGGCTaGATTAAAAAGATGCTGCCA | + |
Preference number: 2 (lower is better) Translates to: TQPVALAVTPGFCCPLLVKHSLG*IKKMLP Trigger: TGGCAGCATCTTTTTAATCCAGCCCAGTGAATGTTT...GACCAGGAGAGGGCAGCAGAACCCTGGAGTTACTGCTAGAGCTACAGGTTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR-3UTR CCA 90 bp | AGCCAGGGATGTGTTCAATCAAGGCAATCTAGGCTTATTTATGAAGTAATCATGCATATGGGGTGGGGGTaGGGAAGCAAATGTGTGGAG | + |
Preference number: 2 (lower is better) Translates to: SQGCVQSRQSRLIYEVIMHMGWG*GSKCVE Trigger: CTCCACACATTTGCTTCCCCACCCCCACCCCATATG...CATGATTACTTCATAAATAAGCCTAGATTGCCTTGATTGAACACATCCCTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR-3UTR GCA 90 bp | GGGACTAAAAGAACAGAGACCAGAATAAAATTTGGAGGGTTGTCAATATTTGAACATGTGTGTGCCTGGTaGCTTAGAGGTCAGGCGAGG | + |
Preference number: 2 (lower is better) Translates to: GTKRTETRIKFGGLSIFEHVCAW*LRGQAR Trigger: CCTCGCCTGACCTCTAAGGCACCAGGCACACACATG...TTCAAATATTGACAACCCTCCAAATTTTATTCTGGTCTCTGTTCTTTTAGTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR-3UTR CCA 90 bp | TTTCCTGAGAGAACTGACAAGTTATGGAGAAAATTATCTAAAAGCTTACTCCCTTCTGCTGCCCTCTCCTaGTCTCTACAGGCACTGCAC | + |
Preference number: 2 (lower is better) Translates to: FPERTDKLWRKLSKSLLPSAALS*SLQALH Trigger: GTGCAGTGCCTGTAGAGACCAGGAGAGGGCAGCAGA...AGGGAGTAAGCTTTTAGATAATTTTCTCCATAACTTGTCAGTTCTCTCAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR-3UTR GCA 90 bp | AAGAATTATCAACAACATAGGAGGAAAGCCAGGGATGTGTTCAATCAAGGCAATGCTGGATTAAAAAGATaGTGCCACTATAGCCTAGTC | + |
Preference number: 2 (lower is better) Translates to: KNYQQHRRKARDVFNQGNAGLKR*CHYSLV Trigger: GACTAGGCTATAGTGGCAGCATCTTTTTAATCCAGC...ATTGCCTTGATTGAACACATCCCTGGCTTTCCTCCTATGTTGTTGATAATTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR-3UTR GCA 90 bp | AAGCCTTCATGTAGCTTGTGCAAAACAGCCCTGTTTGAAGAATGCTCTAAAACTAGCACCCCACTGTATTaGCTTTTAAATGACACAAAA | + |
Preference number: 2 (lower is better) Translates to: KPSCSLCKTALFEECSKTSTPLY*LLNDTK Trigger: TTTTGTGTCATTTAAAAGGCAATACAGTGGGGTGCT...AGTTTTAGAGCATTCTTCAAACAGGGCTGTTTTGCACAAGCTACATGAAGGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR-3UTR CCA 90 bp | ATGTTAGACCTCAAGCTAAAGGAACTAGTAATTAACTCACATCCATCCAACTTACCCCTAAACATTCACTaGGCTGGATTAAAAAGATGC | + |
Preference number: 2 (lower is better) Translates to: MLDLKLKELVINSHPSNLPLNIH*AGLKRC Trigger: GCATCTTTTTAATCCAGCCCAGTGAATGTTTAGGGG...TAAGTTGGATGGATGTGAGTTAATTACTAGTTCCTTTAGCTTGAGGTCTAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR-3UTR GCA 90 bp | TTTCCTGAGAGAACTGACAAGTTATGGAGAAAATTATCTAAAAGCTTACTCCCTGGATTAAAAAGATGCTaGCACTATAGCCTAGTCATA | + |
Preference number: 2 (lower is better) Translates to: FPERTDKLWRKLSKSLLPGLKRC*HYSLVI Trigger: TATGACTAGGCTATAGTGGCAGCATCTTTTTAATCC...AGGGAGTAAGCTTTTAGATAATTTTCTCCATAACTTGTCAGTTCTCTCAGGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR GCA 72 bp | CAACCTGTAGCTCTAGCAGTAACTCCAGGGTTCTGCTaGCCTCTCCTGGTCTCTACAGGCACTGCACCCACA | + |
Preference number: 3 (lower is better) Translates to: QPVALAVTPGFC*PLLVSTGTAPT Trigger: TGTGGGTGCAGTGCCTGTAGAGACCAGGAGAGGGCAGCAGAACCCTGGAGTTACTGCTAGAGCTACAGGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR-3UTR CAA 90 bp | ACCCAACCTGTAGCTCTAGCAGTAACTCCAGGGTTCTGCTGCCCTCTCCTGGTCCTTTCAGTCAAGAAATaGACCAGAATGCAAGGTTTA | + |
Preference number: 3 (lower is better) Translates to: TQPVALAVTPGFCCPLLVLSVKK*TRMQGL Trigger: TAAACCTTGCATTCTGGTCAATTTCTTGACTGAAAG...GACCAGGAGAGGGCAGCAGAACCCTGGAGTTACTGCTAGAGCTACAGGTTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR-3UTR CAA 90 bp | ATGTTAGACCTCAAGCTAAAGGAACTAGTAATTAACTCACATCCATCCAACTTAAAGGGTGGCCTCACTTaGTCCCCAGCAGCACTTACA | + |
Preference number: 3 (lower is better) Translates to: MLDLKLKELVINSHPSNLKGGLT*SPAALT Trigger: TGTAAGTGCTGCTGGGGACAAAGTGAGGCCACCCTT...TAAGTTGGATGGATGTGAGTTAATTACTAGTTCCTTTAGCTTGAGGTCTAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR-3UTR CAA 90 bp | GGGACTAAAAGAACAGAGACCAGAATAAAATTTGGAGGGTTGTCAATATTTGAAATGTGTATGAGTGTTTaGCACACATGTGTCTATGCA | + |
Preference number: 3 (lower is better) Translates to: GTKRTETRIKFGGLSIFEMCMSV*HTCVYA Trigger: TGCATAGACACATGTGTGCAAAACACTCATACACAT...TTCAAATATTGACAACCCTCCAAATTTTATTCTGGTCTCTGTTCTTTTAGTCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR GCA 90 bp | ACCCAACCTGTAGCTCTAGCAGTAACTCCAGGGTTCTGCTGCCCTCTCCTGGTCTTCCTTCTCCTGGCTTaGCAACAGCTGTGCTCCGTC | + |
Preference number: 4 (lower is better) Translates to: TQPVALAVTPGFCCPLLVFLLLA*QQLCSV Trigger: GACGGAGCACAGCTGTTGGCAAGCCAGGAGAAGGAA...GACCAGGAGAGGGCAGCAGAACCCTGGAGTTACTGCTAGAGCTACAGGTTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR GCA 90 bp | AAGCCTTCATGTAGCTTGTGCAAAACAGCCCTGTTTGAAGAATGCTCTAAAACTCGCTGCACCCGCCGCTaGCGCGCCGCTTTGCTGTCG | + |
Preference number: 4 (lower is better) Translates to: KPSCSLCKTALFEECSKTRCTRR*RAALLS Trigger: CGACAGCAAAGCGGCGCGGCAGCGGCGGGTGCAGCG...AGTTTTAGAGCATTCTTCAAACAGGGCTGTTTTGCACAAGCTACATGAAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR GCA 90 bp | GCAGCACTTACAAATGCCCCTAAACATTCACTGGGCTGGATTAAAAAGATGCTGCCTGCTCCTGCAAGATaGAGTCGCACACGGCGGCGC | + |
Preference number: 4 (lower is better) Translates to: AALTNAPKHSLGWIKKMLPAPAR*SRTRRR Trigger: GCGCCGCCGTGTGCGACTGCATCTTGCAGGAGCAGG...CAGCATCTTTTTAATCCAGCCCAGTGAATGTTTAGGGGCATTTGTAAGTGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CCA 90 bp | ACCCAACCTGTAGCTCTAGCAGTAACTCCAGGGTTCTGCTGCCCTCTCCTGGTCGATGGAGTAATCCAATaGCACAAACTCTGGGAGTTG | + |
Preference number: 4 (lower is better) Translates to: TQPVALAVTPGFCCPLLVDGVIQ*HKLWEL Trigger: CAACTCCCAGAGTTTGTGCCATTGGATTACTCCATC...GACCAGGAGAGGGCAGCAGAACCCTGGAGTTACTGCTAGAGCTACAGGTTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR GCA 90 bp | ACCCAACCTGTAGCTCTAGCAGTAACTCCAGGGTTCTGCTGCCCTCTCCTGGTCTTGGTACATAGCTTGTaGTCCAGTCCAAGCAAAAAG | + |
Preference number: 4 (lower is better) Translates to: TQPVALAVTPGFCCPLLVLVHSL*SSPSKK Trigger: CTTTTTGCTTGGACTGGAGCACAAGCTATGTACCAA...GACCAGGAGAGGGCAGCAGAACCCTGGAGTTACTGCTAGAGCTACAGGTTGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CCA 90 bp | ACCCAACCTGTAGCTCTAGCAGTAACTCCAGGGTTCTGCTGCCCTCTCCTGGTCCAATGGCACAAACTCTaGGAGTTGCTTAGATATTCG | + |
Preference number: 4 (lower is better) Translates to: TQPVALAVTPGFCCPLLVQWHKL*ELLRYS Trigger: CGAATATCTAAGCAACTCCCAGAGTTTGTGCCATTG...GACCAGGAGAGGGCAGCAGAACCCTGGAGTTACTGCTAGAGCTACAGGTTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR CAA 72 bp | AAGCAGCAGAGCCAGGTCAATAAGGGTGGCCTCACTTaGTCCCCAGCAGCACTTACAAATGCCCCTAAACAT | + |
Preference number: 4 (lower is better) Translates to: KQQSQVNKGGLT*SPAALTNAPKH Trigger: ATGTTTAGGGGCATTTGTAAGTGCTGCTGGGGACAAAGTGAGGCCACCCTTATTGACCTGGCTCTGCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CCA 90 bp | GCAGCACTTACAAATGCCCCTAAACATTCACTGGGCTGGATTAAAAAGATGCTGGTCTTGGTGAAGCTCTaGTACCAGCGGTCGGCGTTC | + |
Preference number: 4 (lower is better) Translates to: AALTNAPKHSLGWIKKMLVLVKL*YQRSAF Trigger: GAACGCCGACCGCTGGTACCAGAGCTTCACCAAGAC...CAGCATCTTTTTAATCCAGCCCAGTGAATGTTTAGGGGCATTTGTAAGTGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CCA 90 bp | ACCCAACCTGTAGCTCTAGCAGTAACTCCAGGGTTCTGCTGCCCTCTCCTGGTCCAATGGAAGCTTGTCTaGTTTACATTTCATCACAGG | + |
Preference number: 4 (lower is better) Translates to: TQPVALAVTPGFCCPLLVQWKLV*FTFHHR Trigger: CCTGTGATGAAATGTAAACCAGACAAGCTTCCATTG...GACCAGGAGAGGGCAGCAGAACCCTGGAGTTACTGCTAGAGCTACAGGTTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CCA 90 bp | GGGACTAAAAGAACAGAGACCAGAATAAAATTTGGAGGGTTGTCAATATTTGAACTACCTGGTCCAGGATaGAGGAGGCGAGGGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: GTKRTETRIKFGGLSIFELPGPG*RRRGPG Trigger: GCCAGGCCCTCGCCTCCTCCATCCTGGACCAGGTAG...TTCAAATATTGACAACCCTCCAAATTTTATTCTGGTCTCTGTTCTTTTAGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CCA 90 bp | AGCCAGGGATGTGTTCAATCAAGGCAATCTAGGCTTATTTATGAAGTAATCATGAGCGTCCTCACTACCTaGTCCAGGATGGAGGAGGCG | + |
Preference number: 4 (lower is better) Translates to: SQGCVQSRQSRLIYEVIMSVLTT*SRMEEA Trigger: CGCCTCCTCCATCCTGGACCAGGTAGTGAGGACGCT...CATGATTACTTCATAAATAAGCCTAGATTGCCTTGATTGAACACATCCCTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR TCA 90 bp | AAGAATTATCAACAACATAGGAGGAAAGCCAGGGATGTGTTCAATCAAGGCAATTGCTCAGGACAGGGTTaGGTGGAGCGAGCAGGTTCA | + |
Preference number: 4 (lower is better) Translates to: KNYQQHRRKARDVFNQGNCSGQG*VERAGS Trigger: TGAACCTGCTCGCTCCACTCAACCCTGTCCTGAGCA...ATTGCCTTGATTGAACACATCCCTGGCTTTCCTCCTATGTTGTTGATAATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR TCA 90 bp | AAGAATTATCAACAACATAGGAGGAAAGCCAGGGATGTGTTCAATCAAGGCAATCAAACACGGTCTTGGTaGAGCTCTGGTACCAGCGGT | + |
Preference number: 4 (lower is better) Translates to: KNYQQHRRKARDVFNQGNQTRSW*SSGTSG Trigger: ACCGCTGGTACCAGAGCTTCACCAAGACCGTGTTTG...ATTGCCTTGATTGAACACATCCCTGGCTTTCCTCCTATGTTGTTGATAATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR CAA 72 bp | ATTAAGAACACTGGTTGCTCTTCCAGAACACCTAGTTaGATTCCCAGGACCCAACCTGTAGCTCTAGCAGTA | + |
Preference number: 4 (lower is better) Translates to: IKNTGCSSRTPS*IPRTQPVALAV Trigger: TACTGCTAGAGCTACAGGTTGGGTCCTGGGAATCAAACTAGGTGTTCTGGAAGAGCAACCAGTGTTCTTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR GCA 90 bp | AAGCCTTCATGTAGCTTGTGCAAAACAGCCCTGTTTGAAGAATGCTCTAAAACTAGGTCGAGTAACATCTaGTTCGCTCCAGAACCCTTG | + |
Preference number: 4 (lower is better) Translates to: KPSCSLCKTALFEECSKTRSSNI*FAPEPL Trigger: CAAGGGTTCTGGAGCGAAGCAGATGTTACTCGACCT...AGTTTTAGAGCATTCTTCAAACAGGGCTGTTTTGCACAAGCTACATGAAGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CCA 90 bp | GGGACTAAAAGAACAGAGACCAGAATAAAATTTGGAGGGTTGTCAATATTTGAACAGGACAGGGTTGAGTaGAGCGAGCAGGTTCACGAG | + |
Preference number: 4 (lower is better) Translates to: GTKRTETRIKFGGLSIFEQDRVE*SEQVHE Trigger: CTCGTGAACCTGCTCGCTCCACTCAACCCTGTCCTG...TTCAAATATTGACAACCCTCCAAATTTTATTCTGGTCTCTGTTCTTTTAGTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR GCA 90 bp | GCAGCACTTACAAATGCCCCTAAACATTCACTGGGCTGGATTAAAAAGATGCTGACGTACTTCTTGAACTaGATCTTGGTGAGAATCCGT | + |
Preference number: 4 (lower is better) Translates to: AALTNAPKHSLGWIKKMLTYFLN*ILVRIR Trigger: ACGGATTCTCACCAAGATGCAGTTCAAGAAGTACGT...CAGCATCTTTTTAATCCAGCCCAGTGAATGTTTAGGGGCATTTGTAAGTGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CCA 90 bp | AGCCAGGGATGTGTTCAATCAAGGCAATCTAGGCTTATTTATGAAGTAATCATGTCAAGTTCCTTCTCCTaGCTTGCCAACAGCTGTGCT | + |
Preference number: 4 (lower is better) Translates to: SQGCVQSRQSRLIYEVIMSSSFS*LANSCA Trigger: AGCACAGCTGTTGGCAAGCCAGGAGAAGGAACTTGA...CATGATTACTTCATAAATAAGCCTAGATTGCCTTGATTGAACACATCCCTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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3UTR CAA 72 bp | TCCTGGTCTCTACAGGCACTGCACCCACAATGTACATaGACATTCAGGAAAACACCAAAACACACAAAGAAA | + |
Preference number: 4 (lower is better) Translates to: SWSLQALHPQCT*TFRKTPKHTKK Trigger: TTTCTTTGTGTGTTTTGGTGTTTTCCTGAATGTCAATGTACATTGTGGGTGCAGTGCCTGTAGAGACCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR GCA 90 bp | ATGTTAGACCTCAAGCTAAAGGAACTAGTAATTAACTCACATCCATCCAACTTAGATGACCAGCAGGAATaGGTTCTTCACCACGCAACC | + |
Preference number: 4 (lower is better) Translates to: MLDLKLKELVINSHPSNLDDQQE*VLHHAT Trigger: GGTTGCGTGGTGAAGAACGCATTCCTGCTGGTCATC...TAAGTTGGATGGATGTGAGTTAATTACTAGTTCCTTTAGCTTGAGGTCTAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR GCA 90 bp | AAGCCTTCATGTAGCTTGTGCAAAACAGCCCTGTTTGAAGAATGCTCTAAAACTAAGACAGCTTCTACCTaGTCAGCTTGGTTCTGTCTT | + |
Preference number: 4 (lower is better) Translates to: KPSCSLCKTALFEECSKTKTAST*SAWFCL Trigger: AAGACAGAACCAAGCTGAGCAGGTAGAAGCTGTCTT...AGTTTTAGAGCATTCTTCAAACAGGGCTGTTTTGCACAAGCTACATGAAGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CCA 90 bp | TCAGTCAAGAAATTGACCAGAATGCAAGGTTTAATGACAGGTCAACATAAGAAATCGCTCCAGAACCCTTaGTACATAGCTTGTGCTCCA | + |
Preference number: 4 (lower is better) Translates to: SVKKLTRMQGLMTGQHKKSLQNP*YIACAP Trigger: TGGAGCACAAGCTATGTACCAAGGGTTCTGGAGCGA...TTTCTTATGTTGACCTGTCATTAAACCTTGCATTCTGGTCAATTTCTTGACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR GCA 90 bp | AAGCCTTCATGTAGCTTGTGCAAAACAGCCCTGTTTGAAGAATGCTCTAAAACTACAAACTCTGGGAGTTaGTTAGATATTCGAATCTGG | + |
Preference number: 4 (lower is better) Translates to: KPSCSLCKTALFEECSKTTNSGS*LDIRIW Trigger: CCAGATTCGAATATCTAAGCAACTCCCAGAGTTTGT...AGTTTTAGAGCATTCTTCAAACAGGGCTGTTTTGCACAAGCTACATGAAGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR GCA 90 bp | AAGCCTTCATGTAGCTTGTGCAAAACAGCCCTGTTTGAAGAATGCTCTAAAACTCCAAGCAAAAAGACTTaGAATGGCATTAGCTCTGAA | + |
Preference number: 4 (lower is better) Translates to: KPSCSLCKTALFEECSKTPSKKT*NGISSE Trigger: TTCAGAGCTAATGCCATTGCAAGTCTTTTTGCTTGG...AGTTTTAGAGCATTCTTCAAACAGGGCTGTTTTGCACAAGCTACATGAAGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR GCA 90 bp | AAGAATTATCAACAACATAGGAGGAAAGCCAGGGATGTGTTCAATCAAGGCAATATACTGTTTTCATACTaGCGTCTGAACAATGGAAGC | + |
Preference number: 4 (lower is better) Translates to: KNYQQHRRKARDVFNQGNILFSY*RLNNGS Trigger: GCTTCCATTGTTCAGACGGCAGTATGAAAACAGTAT...ATTGCCTTGATTGAACACATCCCTGGCTTTCCTCCTATGTTGTTGATAATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CCA 90 bp | TTTCCTGAGAGAACTGACAAGTTATGGAGAAAATTATCTAAAAGCTTACTCCCTCTGCCGTCTGAACAATaGAAGCTTGTCTGGTTTACA | + |
Preference number: 4 (lower is better) Translates to: FPERTDKLWRKLSKSLLPLPSEQ*KLVWFT Trigger: TGTAAACCAGACAAGCTTCCATTGTTCAGACGGCAG...AGGGAGTAAGCTTTTAGATAATTTTCTCCATAACTTGTCAGTTCTCTCAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR TCA 90 bp | AGCCAGGGATGTGTTCAATCAAGGCAATCTAGGCTTATTTATGAAGTAATCATGTTATTTAGCAGAAAGTaGACTATCTGCAGGAGAGTA | + |
Preference number: 4 (lower is better) Translates to: SQGCVQSRQSRLIYEVIMLFSRK*TICRRV Trigger: TACTCTCCTGCAGATAGTTCACTTTCTGCTAAATAA...CATGATTACTTCATAAATAAGCCTAGATTGCCTTGATTGAACACATCCCTGGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 90 bp | GAGGGGGCCGCGTGCACCGTCGCCTGCCAGCGCTGCACCCGCCGCTaGCGCGCCGCTTTGCTGTCGGCGGTCATGGAAGCCACGATCGGC | + |
Preference number: 5 (lower is better) Translates to: EGAACTVACQRCTRR*RAALLSAVMEATIG Trigger: GCCGATCGTGGCTTCCATGACCGCCGACAGCAAAGCGGCGCGGCAGCGGCGGGTGCAGCGCTGGCAGGCGACGGTGCACGCGGCCCCCTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 90 bp | AGCGCTGCACCCGCCGCTGCCGCGCCGCTTTGCTGTCGGCGGTCATaGAAGCCACGATCGGCGGGTACCGCGCGACGGGCGTCGCCACGA | + |
Preference number: 5 (lower is better) Translates to: SAAPAAAAPLCCRRS*KPRSAGTARRASPR Trigger: TCGTGGCGACGCCCGTCGCGCGGTACCCGCCGATCGTGGCTTCCATGACCGCCGACAGCAAAGCGGCGCGGCAGCGGCGGGTGCAGCGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 90 bp | TTCTCGTCCACCGAGGGGGCCGCGTGCACCGTCGCCTGCCAGCGCTaGACCCGCCGCTGCCGCGCCGCTTTGCTGTCGGCGGTCATGGAA | + |
Preference number: 5 (lower is better) Translates to: FSSTEGAACTVACQR*TRRCRAALLSAVME Trigger: TTCCATGACCGCCGACAGCAAAGCGGCGCGGCAGCGGCGGGTGCAGCGCTGGCAGGCGACGGTGCACGCGGCCCCCTCGGTGGACGAGAA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 90 bp | ATCCGTATCTTCTCGTCCACCGAGGGGGCCGCGTGCACCGTCGCCTaGCAGCGCTGCACCCGCCGCTGCCGCGCCGCTTTGCTGTCGGCG | + |
Preference number: 5 (lower is better) Translates to: IRIFSSTEGAACTVA*QRCTRRCRAALLSA Trigger: CGCCGACAGCAAAGCGGCGCGGCAGCGGCGGGTGCAGCGCTGGCAGGCGACGGTGCACGCGGCCCCCTCGGTGGACGAGAAGATACGGAT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 90 bp | ATCTTGGTGAGAATCCGTATCTTCTCGTCCACCGAGGGGGCCGCGTaGACCGTCGCCTGCCAGCGCTGCACCCGCCGCTGCCGCGCCGCT | + |
Preference number: 5 (lower is better) Translates to: ILVRIRIFSSTEGAA*TVACQRCTRRCRAA Trigger: AGCGGCGCGGCAGCGGCGGGTGCAGCGCTGGCAGGCGACGGTGCACGCGGCCCCCTCGGTGGACGAGAAGATACGGATTCTCACCAAGAT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS TCA 90 bp | ACAGCGCCGGGGCGGGCGGCAGGCCCGAGACAAACACGGTCTTGGTaGAGCTCTGGTACCAGCGGTCGGCGTTCAAGGCGGAGATCTGCG | + |
Preference number: 5 (lower is better) Translates to: TAPGRAAGPRQTRSW*SSGTSGRRSRRRSA Trigger: CGCAGATCTCCGCCTTGAACGCCGACCGCTGGTACCAGAGCTTCACCAAGACCGTGTTTGTCTCGGGCCTGCCGCCCGCCCCGGCGCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 90 bp | GTGGAGCGAGCAGGTTCACGAGCGTCCTCACTACCTGGTCCAGGATaGAGGAGGCGAGGGCCTGGCGACGATCGAAGAGGGAGCGGGGCC | + |
Preference number: 5 (lower is better) Translates to: VERAGSRASSLPGPG*RRRGPGDDRRGSGA Trigger: GGCCCCGCTCCCTCTTCGATCGTCGCCAGGCCCTCGCCTCCTCCATCCTGGACCAGGTAGTGAGGACGCTCGTGAACCTGCTCGCTCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 90 bp | GGGGCGGGCGGCAGGCCCGAGACAAACACGGTCTTGGTGAAGCTCTaGTACCAGCGGTCGGCGTTCAAGGCGGAGATCTGCGGATGCACC | + |
Preference number: 5 (lower is better) Translates to: GAGGRPETNTVLVKL*YQRSAFKAEICGCT Trigger: GGTGCATCCGCAGATCTCCGCCTTGAACGCCGACCGCTGGTACCAGAGCTTCACCAAGACCGTGTTTGTCTCGGGCCTGCCGCCCGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS TCA 90 bp | CAACAGAGCGTTTACAATCGAGAGCGGCAGTGCTCAGGACAGGGTTaGGTGGAGCGAGCAGGTTCACGAGCGTCCTCACTACCTGGTCCA | + |
Preference number: 5 (lower is better) Translates to: QQSVYNRERQCSGQG*VERAGSRASSLPGP Trigger: TGGACCAGGTAGTGAGGACGCTCGTGAACCTGCTCGCTCCACTCAACCCTGTCCTGAGCACTGCCGCTCTCGATTGTAAACGCTCTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 90 bp | AGAGCGTTTACAATCGAGAGCGGCAGTGCTCAGGACAGGGTTGAGTaGAGCGAGCAGGTTCACGAGCGTCCTCACTACCTGGTCCAGGAT | + |
Preference number: 5 (lower is better) Translates to: RAFTIESGSAQDRVE*SEQVHERPHYLVQD Trigger: ATCCTGGACCAGGTAGTGAGGACGCTCGTGAACCTGCTCGCTCCACTCAACCCTGTCCTGAGCACTGCCGCTCTCGATTGTAAACGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 90 bp | GCGTTCAAGGCGGAGATCTGCGGATGCACCACGTACTTCTTGAACTaGATCTTGGTGAGAATCCGTATCTTCTCGTCCACCGAGGGGGCC | + |
Preference number: 5 (lower is better) Translates to: AFKAEICGCTTYFLN*ILVRIRIFSSTEGA Trigger: GGCCCCCTCGGTGGACGAGAAGATACGGATTCTCACCAAGATGCAGTTCAAGAAGTACGTGGTGCATCCGCAGATCTCCGCCTTGAACGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 90 bp | AAGCTCTGGTACCAGCGGTCGGCGTTCAAGGCGGAGATCTGCGGATaGACCACGTACTTCTTGAACTGCATCTTGGTGAGAATCCGTATC | + |
Preference number: 5 (lower is better) Translates to: KLWYQRSAFKAEICG*TTYFLNCILVRIRI Trigger: GATACGGATTCTCACCAAGATGCAGTTCAAGAAGTACGTGGTGCATCCGCAGATCTCCGCCTTGAACGCCGACCGCTGGTACCAGAGCTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 90 bp | TTGGTGAAGCTCTGGTACCAGCGGTCGGCGTTCAAGGCGGAGATCTaGGGATGCACCACGTACTTCTTGAACTGCATCTTGGTGAGAATC | + |
Preference number: 5 (lower is better) Translates to: LVKLWYQRSAFKAEI*GCTTYFLNCILVRI Trigger: GATTCTCACCAAGATGCAGTTCAAGAAGTACGTGGTGCATCCGCAGATCTCCGCCTTGAACGCCGACCGCTGGTACCAGAGCTTCACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CAA 90 bp | AAGCCTTCATGTAGCTTGTGCAAAACAGCCCTGTTTGAAGAATGCTCTAAAACTGTGCTCAGGACAGGGTaGAGTGGAGCGAGCAGGTTC | + |
Preference number: 5 (lower is better) Translates to: KPSCSLCKTALFEECSKTVLRTG*SGASRF Trigger: GAACCTGCTCGCTCCACTCAACCCTGTCCTGAGCAC...AGTTTTAGAGCATTCTTCAAACAGGGCTGTTTTGCACAAGCTACATGAAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 90 bp | CTTGCAATGGCATTAGCTCTGAAGACAGCTTCTACCTGCTCAGCTTaGTTCTGTCTTATCAGTCTCTCTCTCTTCAGTCTGTCAGGTATC | + |
Preference number: 5 (lower is better) Translates to: LAMALALKTASTCSA*FCLISLSLFSLSGI Trigger: GATACCTGACAGACTGAAGAGAGAGAGACTGATAAGACAGAACCAAGCTGAGCAGGTAGAAGCTGTCTTCAGAGCTAATGCCATTGCAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 90 bp | GGTATCGTAAAGCATCAATATGGCCTTTTCGATGACCAGCAGGAATaGGTTCTTCACCACGCAACCAGTAAAAGTCAACAGAGCGTTTAC | + |
Preference number: 5 (lower is better) Translates to: GIVKHQYGLFDDQQE*VLHHATSKSQQSVY Trigger: GTAAACGCTCTGTTGACTTTTACTGGTTGCGTGGTGAAGAACGCATTCCTGCTGGTCATCGAAAAGGCCATATTGATGCTTTACGATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 90 bp | GCAAAAAGACTTGCAATGGCATTAGCTCTGAAGACAGCTTCTACCTaGTCAGCTTGGTTCTGTCTTATCAGTCTCTCTCTCTTCAGTCTG | + |
Preference number: 5 (lower is better) Translates to: AKRLAMALALKTAST*SAWFCLISLSLFSL Trigger: CAGACTGAAGAGAGAGAGACTGATAAGACAGAACCAAGCTGAGCAGGTAGAAGCTGTCTTCAGAGCTAATGCCATTGCAAGTCTTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS TCA 90 bp | GCCAACAGCTGTGCTCCGTCTTCTCTTGGTTTATTTAGCAGAAAGTaGACTATCTGCAGGAGAGTACCATCATCAAAGCCTTTCACATCA | + |
Preference number: 5 (lower is better) Translates to: ANSCAPSSLGLFSRK*TICRRVPSSKPFTS Trigger: TGATGTGAAAGGCTTTGATGATGGTACTCTCCTGCAGATAGTTCACTTTCTGCTAAATAAACCAAGAGAAGACGGAGCACAGCTGTTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CAA 90 bp | AAGAATTATCAACAACATAGGAGGAAAGCCAGGGATGTGTTCAATCAAGGCAATTGCACCACGTACTTCTaGAACTGCATCTTGGTGAGA | + |
Preference number: 5 (lower is better) Translates to: KNYQQHRRKARDVFNQGNCTTYF*NCILVR Trigger: TCTCACCAAGATGCAGTTCAAGAAGTACGTGGTGCA...ATTGCCTTGATTGAACACATCCCTGGCTTTCCTCCTATGTTGTTGATAATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CAA 90 bp | TTTCCTGAGAGAACTGACAAGTTATGGAGAAAATTATCTAAAAGCTTACTCCCTTTCGCTCCAGAACCCTaGGTACATAGCTTGTGCTCC | + |
Preference number: 5 (lower is better) Translates to: FPERTDKLWRKLSKSLLPFAPEP*VHSLCS Trigger: GGAGCACAAGCTATGTACCAAGGGTTCTGGAGCGAA...AGGGAGTAAGCTTTTAGATAATTTTCTCCATAACTTGTCAGTTCTCTCAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CAA 90 bp | AAGCCTTCATGTAGCTTGTGCAAAACAGCCCTGTTTGAAGAATGCTCTAAAACTTTTACGGGGGTTATTTaGATCAGCTTGGACAGTCAG | + |
Preference number: 5 (lower is better) Translates to: KPSCSLCKTALFEECSKTFTGVI*ISLDSQ Trigger: CTGACTGTCCAAGCTGATCAAAATAACCCCCGTAAA...AGTTTTAGAGCATTCTTCAAACAGGGCTGTTTTGCACAAGCTACATGAAGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 90 bp | TTTACATTTCATCACAGGGATTTCTGTAGGGATGGAGTAATCCAATaGCACAAACTCTGGGAGTTGCTTAGATATTCGAATCTGGTTGTG | + |
Preference number: 5 (lower is better) Translates to: FTFHHRDFCRDGVIQ*HKLWELLRYSNLVV Trigger: CACAACCAGATTCGAATATCTAAGCAACTCCCAGAGTTTGTGCCATTGGATTACTCCATCCCTACAGAAATCCCTGTGATGAAATGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CAA 90 bp | AAGAATTATCAACAACATAGGAGGAAAGCCAGGGATGTGTTCAATCAAGGCAATTTCTACCTGCTCAGCTaGGTTCTGTCTTATCAGTCT | + |
Preference number: 5 (lower is better) Translates to: KNYQQHRRKARDVFNQGNFYLLS*VLSYQS Trigger: AGACTGATAAGACAGAACCAAGCTGAGCAGGTAGAA...ATTGCCTTGATTGAACACATCCCTGGCTTTCCTCCTATGTTGTTGATAATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CAA 90 bp | TTTCCTGAGAGAACTGACAAGTTATGGAGAAAATTATCTAAAAGCTTACTCCCTCCCTTGGTACATAGCTaGTGCTCCAGTCCAAGCAAA | + |
Preference number: 5 (lower is better) Translates to: FPERTDKLWRKLSKSLLPPLVHS*CSSPSK Trigger: TTTGCTTGGACTGGAGCACAAGCTATGTACCAAGGG...AGGGAGTAAGCTTTTAGATAATTTTCTCCATAACTTGTCAGTTCTCTCAGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CAA 90 bp | AAGAATTATCAACAACATAGGAGGAAAGCCAGGGATGTGTTCAATCAAGGCAATCACAAACTCTGGGAGTaGCTTAGATATTCGAATCTG | + |
Preference number: 5 (lower is better) Translates to: KNYQQHRRKARDVFNQGNHKLWE*LRYSNL Trigger: CAGATTCGAATATCTAAGCAACTCCCAGAGTTTGTG...ATTGCCTTGATTGAACACATCCCTGGCTTTCCTCCTATGTTGTTGATAATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 90 bp | CATGGATCTGCTGTTTTTGAGCCAGTAAATATACTGTTTTCATACTaGCGTCTGAACAATGGAAGCTTGTCTGGTTTACATTTCATCACA | + |
Preference number: 5 (lower is better) Translates to: HGSAVFEPVNILFSY*RLNNGSLSGLHFIT Trigger: TGTGATGAAATGTAAACCAGACAAGCTTCCATTGTTCAGACGGCAGTATGAAAACAGTATATTTACTGGCTCAAAAACAGCAGATCCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CAA 90 bp | AAGAATTATCAACAACATAGGAGGAAAGCCAGGGATGTGTTCAATCAAGGCAATATCTGGTTGTGTGGTTaGTCATTTATTTGGTATCGT | + |
Preference number: 5 (lower is better) Translates to: KNYQQHRRKARDVFNQGNIWLCG*SFIWYR Trigger: ACGATACCAAATAAATGACAAACCACACAACCAGAT...ATTGCCTTGATTGAACACATCCCTGGCTTTCCTCCTATGTTGTTGATAATTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CAA 90 bp | TTTCCTGAGAGAACTGACAAGTTATGGAGAAAATTATCTAAAAGCTTACTCCCTGTTATTTTGATCAGCTaGGACAGTCAGTGCCAAAGT | + |
Preference number: 5 (lower is better) Translates to: FPERTDKLWRKLSKSLLPVILIS*DSQCQS Trigger: ACTTTGGCACTGACTGTCCAAGCTGATCAAAATAAC...AGGGAGTAAGCTTTTAGATAATTTTCTCCATAACTTGTCAGTTCTCTCAGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS-3UTR CAA 90 bp | ATGTTAGACCTCAAGCTAAAGGAACTAGTAATTAACTCACATCCATCCAACTTAGTGCTCCGTCTTCTCTaGGTTTATTTAGCAGAAAGT | + |
Preference number: 5 (lower is better) Translates to: MLDLKLKELVINSHPSNLVLRLL*VYLAES Trigger: ACTTTCTGCTAAATAAACCAAGAGAAGACGGAGCAC...TAAGTTGGATGGATGTGAGTTAATTACTAGTTCCTTTAGCTTGAGGTCTAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 72 bp | CCCGCCGCTGCCGCGCCGCTTTGCTGTCGGCGGTCATaGAAGCCACGATCGGCGGGTACCGCGCGACGGGCG | + |
Preference number: 6 (lower is better) Translates to: PAAAAPLCCRRS*KPRSAGTARRA Trigger: CGCCCGTCGCGCGGTACCCGCCGATCGTGGCTTCCATGACCGCCGACAGCAAAGCGGCGCGGCAGCGGCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 72 bp | GCGTGCACCGTCGCCTGCCAGCGCTGCACCCGCCGCTaGCGCGCCGCTTTGCTGTCGGCGGTCATGGAAGCC | + |
Preference number: 6 (lower is better) Translates to: ACTVACQRCTRR*RAALLSAVMEA Trigger: GGCTTCCATGACCGCCGACAGCAAAGCGGCGCGGCAGCGGCGGGTGCAGCGCTGGCAGGCGACGGTGCACGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 72 bp | GCCGGCGGCGCCGCACGTAGACCTGCTCCTGCAAGATaGAGTCGCACACGGCGGCGCGCAGGGCGGCGAGGT | + |
Preference number: 6 (lower is better) Translates to: AGGAARRPAPAR*SRTRRRAGRRG Trigger: ACCTCGCCGCCCTGCGCGCCGCCGTGTGCGACTGCATCTTGCAGGAGCAGGTCTACGTGCGGCGCCGCCGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 90 bp | TGCACCGTCGCCTGCCAGCGCTGCACCCGCCGCTGCCGCGCCGCTTaGCTGTCGGCGGTCATGGAAGCCACGATCGGCGGGTACCGCGCG | + |
Preference number: 6 (lower is better) Translates to: CTVACQRCTRRCRAA*LSAVMEATIGGYRA Trigger: CGCGCGGTACCCGCCGATCGTGGCTTCCATGACCGCCGACAGCAAAGCGGCGCGGCAGCGGCGGGTGCAGCGCTGGCAGGCGACGGTGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 72 bp | CCTGCCAGCGCTGCACCCGCCGCTGCCGCGCCGCTTTaGTGTCGGCGGTCATGGAAGCCACGATCGGCGGGT | + |
Preference number: 6 (lower is better) Translates to: PASAAPAAAAPL*CRRSWKPRSAG Trigger: ACCCGCCGATCGTGGCTTCCATGACCGCCGACAGCAAAGCGGCGCGGCAGCGGCGGGTGCAGCGCTGGCAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 72 bp | CTCACTACCTGGTCCAGGATGGAGGAGGCGAGGGCCTaGCGACGATCGAAGAGGGAGCGGGGCCGGCGGCGC | + |
Preference number: 6 (lower is better) Translates to: LTTWSRMEEARA*RRSKRERGRRR Trigger: GCGCCGCCGGCCCCGCTCCCTCTTCGATCGTCGCCAGGCCCTCGCCTCCTCCATCCTGGACCAGGTAGTGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 90 bp | GGCGACAGCGCCGGGGCGGGCGGCAGGCCCGAGACAAACACGGTCTaGGTGAAGCTCTGGTACCAGCGGTCGGCGTTCAAGGCGGAGATC | + |
Preference number: 6 (lower is better) Translates to: GDSAGAGGRPETNTV*VKLWYQRSAFKAEI Trigger: GATCTCCGCCTTGAACGCCGACCGCTGGTACCAGAGCTTCACCAAGACCGTGTTTGTCTCGGGCCTGCCGCCCGCCCCGGCGCTGTCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS TCA 72 bp | GGGCGGGCGGCAGGCCCGAGACAAACACGGTCTTGGTaGAGCTCTGGTACCAGCGGTCGGCGTTCAAGGCGG | + |
Preference number: 6 (lower is better) Translates to: GRAAGPRQTRSW*SSGTSGRRSRR Trigger: CCGCCTTGAACGCCGACCGCTGGTACCAGAGCTTCACCAAGACCGTGTTTGTCTCGGGCCTGCCGCCCGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 72 bp | GCCGGGGCGGGCGGCAGGCCCGAGACAAACACGGTCTaGGTGAAGCTCTGGTACCAGCGGTCGGCGTTCAAG | + |
Preference number: 6 (lower is better) Translates to: AGAGGRPETNTV*VKLWYQRSAFK Trigger: CTTGAACGCCGACCGCTGGTACCAGAGCTTCACCAAGACCGTGTTTGTCTCGGGCCTGCCGCCCGCCCCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 72 bp | GCAGGTTCACGAGCGTCCTCACTACCTGGTCCAGGATaGAGGAGGCGAGGGCCTGGCGACGATCGAAGAGGG | + |
Preference number: 6 (lower is better) Translates to: AGSRASSLPGPG*RRRGPGDDRRG Trigger: CCCTCTTCGATCGTCGCCAGGCCCTCGCCTCCTCCATCCTGGACCAGGTAGTGAGGACGCTCGTGAACCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 72 bp | AGTGGAGCGAGCAGGTTCACGAGCGTCCTCACTACCTaGTCCAGGATGGAGGAGGCGAGGGCCTGGCGACGA | + |
Preference number: 6 (lower is better) Translates to: SGASRFTSVLTT*SRMEEARAWRR Trigger: TCGTCGCCAGGCCCTCGCCTCCTCCATCCTGGACCAGGTAGTGAGGACGCTCGTGAACCTGCTCGCTCCACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 72 bp | GGCAGGCCCGAGACAAACACGGTCTTGGTGAAGCTCTaGTACCAGCGGTCGGCGTTCAAGGCGGAGATCTGC | + |
Preference number: 6 (lower is better) Translates to: GRPETNTVLVKL*YQRSAFKAEIC Trigger: GCAGATCTCCGCCTTGAACGCCGACCGCTGGTACCAGAGCTTCACCAAGACCGTGTTTGTCTCGGGCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 72 bp | ACAATCGAGAGCGGCAGTGCTCAGGACAGGGTTGAGTaGAGCGAGCAGGTTCACGAGCGTCCTCACTACCTG | + |
Preference number: 6 (lower is better) Translates to: TIESGSAQDRVE*SEQVHERPHYL Trigger: CAGGTAGTGAGGACGCTCGTGAACCTGCTCGCTCCACTCAACCCTGTCCTGAGCACTGCCGCTCTCGATTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 90 bp | TCAACAGAGCGTTTACAATCGAGAGCGGCAGTGCTCAGGACAGGGTaGAGTGGAGCGAGCAGGTTCACGAGCGTCCTCACTACCTGGTCC | + |
Preference number: 6 (lower is better) Translates to: STERLQSRAAVLRTG*SGASRFTSVLTTWS Trigger: GGACCAGGTAGTGAGGACGCTCGTGAACCTGCTCGCTCCACTCAACCCTGTCCTGAGCACTGCCGCTCTCGATTGTAAACGCTCTGTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 72 bp | CGTTTACAATCGAGAGCGGCAGTGCTCAGGACAGGGTaGAGTGGAGCGAGCAGGTTCACGAGCGTCCTCACT | + |
Preference number: 6 (lower is better) Translates to: RLQSRAAVLRTG*SGASRFTSVLT Trigger: AGTGAGGACGCTCGTGAACCTGCTCGCTCCACTCAACCCTGTCCTGAGCACTGCCGCTCTCGATTGTAAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS TCA 72 bp | GTTTACAATCGAGAGCGGCAGTGCTCAGGACAGGGTTaGGTGGAGCGAGCAGGTTCACGAGCGTCCTCACTA | + |
Preference number: 6 (lower is better) Translates to: VYNRERQCSGQG*VERAGSRASSL Trigger: TAGTGAGGACGCTCGTGAACCTGCTCGCTCCACTCAACCCTGTCCTGAGCACTGCCGCTCTCGATTGTAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 90 bp | CGGTCGGCGTTCAAGGCGGAGATCTGCGGATGCACCACGTACTTCTaGAACTGCATCTTGGTGAGAATCCGTATCTTCTCGTCCACCGAG | + |
Preference number: 6 (lower is better) Translates to: RSAFKAEICGCTTYF*NCILVRIRIFSSTE Trigger: CTCGGTGGACGAGAAGATACGGATTCTCACCAAGATGCAGTTCAAGAAGTACGTGGTGCATCCGCAGATCTCCGCCTTGAACGCCGACCG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 72 bp | TACCAGCGGTCGGCGTTCAAGGCGGAGATCTGCGGATaGACCACGTACTTCTTGAACTGCATCTTGGTGAGA | + |
Preference number: 6 (lower is better) Translates to: YQRSAFKAEICG*TTYFLNCILVR Trigger: TCTCACCAAGATGCAGTTCAAGAAGTACGTGGTGCATCCGCAGATCTCCGCCTTGAACGCCGACCGCTGGTA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 72 bp | GCGGAGATCTGCGGATGCACCACGTACTTCTTGAACTaGATCTTGGTGAGAATCCGTATCTTCTCGTCCACC | + |
Preference number: 6 (lower is better) Translates to: AEICGCTTYFLN*ILVRIRIFSST Trigger: GGTGGACGAGAAGATACGGATTCTCACCAAGATGCAGTTCAAGAAGTACGTGGTGCATCCGCAGATCTCCGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 72 bp | GATCACAGCCTGGGAGACAAAAGGTCGAGTAACATCTaGTTCGCTCCAGAACCCTTGGTACATAGCTTGTGC | + |
Preference number: 6 (lower is better) Translates to: DHSLGDKRSSNI*FAPEPLVHSLC Trigger: GCACAAGCTATGTACCAAGGGTTCTGGAGCGAAGCAGATGTTACTCGACCTTTTGTCTCCCAGGCTGTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 72 bp | TTCAAGGCGGAGATCTGCGGATGCACCACGTACTTCTaGAACTGCATCTTGGTGAGAATCCGTATCTTCTCG | + |
Preference number: 6 (lower is better) Translates to: FKAEICGCTTYF*NCILVRIRIFS Trigger: CGAGAAGATACGGATTCTCACCAAGATGCAGTTCAAGAAGTACGTGGTGCATCCGCAGATCTCCGCCTTGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 72 bp | AACATCTGCTTCGCTCCAGAACCCTTGGTACATAGCTaGTGCTCCAGTCCAAGCAAAAAGACTTGCAATGGC | + |
Preference number: 6 (lower is better) Translates to: NICFAPEPLVHS*CSSPSKKTCNG Trigger: GCCATTGCAAGTCTTTTTGCTTGGACTGGAGCACAAGCTATGTACCAAGGGTTCTGGAGCGAAGCAGATGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 90 bp | CAAGTTCCTTCTCCTGGCTTGCCAACAGCTGTGCTCCGTCTTCTCTaGGTTTATTTAGCAGAAAGTGAACTATCTGCAGGAGAGTACCAT | + |
Preference number: 6 (lower is better) Translates to: QVPSPGLPTAVLRLL*VYLAESELSAGEYH Trigger: ATGGTACTCTCCTGCAGATAGTTCACTTTCTGCTAAATAAACCAAGAGAAGACGGAGCACAGCTGTTGGCAAGCCAGGAGAAGGAACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 72 bp | CTTGCAATGGCATTAGCTCTGAAGACAGCTTCTACCTaGTCAGCTTGGTTCTGTCTTATCAGTCTCTCTCTC | + |
Preference number: 6 (lower is better) Translates to: LAMALALKTAST*SAWFCLISLSL Trigger: GAGAGAGAGACTGATAAGACAGAACCAAGCTGAGCAGGTAGAAGCTGTCTTCAGAGCTAATGCCATTGCAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 72 bp | ATCTGCTTCGCTCCAGAACCCTTGGTACATAGCTTGTaGTCCAGTCCAAGCAAAAAGACTTGCAATGGCATT | + |
Preference number: 6 (lower is better) Translates to: ICFAPEPLVHSL*SSPSKKTCNGI Trigger: AATGCCATTGCAAGTCTTTTTGCTTGGACTGGAGCACAAGCTATGTACCAAGGGTTCTGGAGCGAAGCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 72 bp | GGCATTAGCTCTGAAGACAGCTTCTACCTGCTCAGCTaGGTTCTGTCTTATCAGTCTCTCTCTCTTCAGTCT | + |
Preference number: 6 (lower is better) Translates to: GISSEDSFYLLS*VLSYQSLSLQS Trigger: AGACTGAAGAGAGAGAGACTGATAAGACAGAACCAAGCTGAGCAGGTAGAAGCTGTCTTCAGAGCTAATGCC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 90 bp | ACTTGCAATGGCATTAGCTCTGAAGACAGCTTCTACCTGCTCAGCTaGGTTCTGTCTTATCAGTCTCTCTCTCTTCAGTCTGTCAGGTAT | + |
Preference number: 6 (lower is better) Translates to: TCNGISSEDSFYLLS*VLSYQSLSLQSVRY Trigger: ATACCTGACAGACTGAAGAGAGAGAGACTGATAAGACAGAACCAAGCTGAGCAGGTAGAAGCTGTCTTCAGAGCTAATGCCATTGCAAGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS TCA 72 bp | ATTTGGTATCGTAAAGCATCAATATGGCCTTTTCGATaGCCAGCAGGAATGCGTTCTTCACCACGCAACCAG | + |
Preference number: 6 (lower is better) Translates to: IWYRKASIWPFR*PAGMRSSPRNQ Trigger: CTGGTTGCGTGGTGAAGAACGCATTCCTGCTGGTCATCGAAAAGGCCATATTGATGCTTTACGATACCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 72 bp | AAGCATCAATATGGCCTTTTCGATGACCAGCAGGAATaGGTTCTTCACCACGCAACCAGTAAAAGTCAACAG | + |
Preference number: 6 (lower is better) Translates to: KHQYGLFDDQQE*VLHHATSKSQQ Trigger: CTGTTGACTTTTACTGGTTGCGTGGTGAAGAACGCATTCCTGCTGGTCATCGAAAAGGCCATATTGATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 72 bp | AGGGATGGAGTAATCCAATGGCACAAACTCTGGGAGTaGCTTAGATATTCGAATCTGGTTGTGTGGTTTGTC | + |
Preference number: 6 (lower is better) Translates to: RDGVIQWHKLWE*LRYSNLVVWFV Trigger: GACAAACCACACAACCAGATTCGAATATCTAAGCAACTCCCAGAGTTTGTGCCATTGGATTACTCCATCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 72 bp | CATCACAGGGATTTCTGTAGGGATGGAGTAATCCAATaGCACAAACTCTGGGAGTTGCTTAGATATTCGAAT | + |
Preference number: 6 (lower is better) Translates to: HHRDFCRDGVIQ*HKLWELLRYSN Trigger: ATTCGAATATCTAAGCAACTCCCAGAGTTTGTGCCATTGGATTACTCCATCCCTACAGAAATCCCTGTGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 90 bp | TCCAATGGCACAAACTCTGGGAGTTGCTTAGATATTCGAATCTGGTaGTGTGGTTTGTCATTTATTTGGTATCGTAAAGCATCAATATGG | + |
Preference number: 6 (lower is better) Translates to: SNGTNSGSCLDIRIW*CGLSFIWYRKASIW Trigger: CCATATTGATGCTTTACGATACCAAATAAATGACAAACCACACAACCAGATTCGAATATCTAAGCAACTCCCAGAGTTTGTGCCATTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS GCA 72 bp | GCTGTTTTTGAGCCAGTAAATATACTGTTTTCATACTaGCGTCTGAACAATGGAAGCTTGTCTGGTTTACAT | + |
Preference number: 6 (lower is better) Translates to: AVFEPVNILFSY*RLNNGSLSGLH Trigger: ATGTAAACCAGACAAGCTTCCATTGTTCAGACGGCAGTATGAAAACAGTATATTTACTGGCTCAAAAACAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CCA 72 bp | GGCACAAACTCTGGGAGTTGCTTAGATATTCGAATCTaGTTGTGTGGTTTGTCATTTATTTGGTATCGTAAA | + |
Preference number: 6 (lower is better) Translates to: GTNSGSCLDIRI*LCGLSFIWYRK Trigger: TTTACGATACCAAATAAATGACAAACCACACAACCAGATTCGAATATCTAAGCAACTCCCAGAGTTTGTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 90 bp | ACAAACTCTGGGAGTTGCTTAGATATTCGAATCTGGTTGTGTGGTTaGTCATTTATTTGGTATCGTAAAGCATCAATATGGCCTTTTCGA | + |
Preference number: 6 (lower is better) Translates to: TNSGSCLDIRIWLCG*SFIWYRKASIWPFR Trigger: TCGAAAAGGCCATATTGATGCTTTACGATACCAAATAAATGACAAACCACACAACCAGATTCGAATATCTAAGCAACTCCCAGAGTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 72 bp | GGGAGTTGCTTAGATATTCGAATCTGGTTGTGTGGTTaGTCATTTATTTGGTATCGTAAAGCATCAATATGG | + |
Preference number: 6 (lower is better) Translates to: GSCLDIRIWLCG*SFIWYRKASIW Trigger: CCATATTGATGCTTTACGATACCAAATAAATGACAAACCACACAACCAGATTCGAATATCTAAGCAACTCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |
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CDS CAA 72 bp | ACAAACTCTGGGAGTTGCTTAGATATTCGAATCTGGTaGTGTGGTTTGTCATTTATTTGGTATCGTAAAGCA | + |
Preference number: 6 (lower is better) Translates to: TNSGSCLDIRIW*CGLSFIWYRKA Trigger: TGCTTTACGATACCAAATAAATGACAAACCACACAACCAGATTCGAATATCTAAGCAACTCCCAGAGTTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022245.10 |