Pregenerated sensors for MRPS27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041632Ensembl transcript IDs: ENSMUST00000052249.7, ENSMUST00000224660.3
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGAAATGTGTCACACTGACAGCAGGTCATGTGGCCACTGGTGCTaGGTCCTGGAAGCGGGTGAAAGGAGCAAGCACCCGGTTCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: VEMCHTDSRSCGHWC*VLEAGERSKHPVLE Trigger: TTCCAGAACCGGGTGCTTGCTCCTTTCACCCGCTTCCAGGACTCAGCACCAGTGGCCACATGACCTGCTGTCAGTGTGACACATTTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCAGAGCCGACCCTTCAGCTATAGCTTCCCGTCACGCTCACCCGATATTCCAGGACTCCACTGTGTaGGGGCTTCAGCCCAACCGT | + |
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Preference number: 2 (lower is better) Translates to: CCRADPSAIASRHAHPIFQDSTV*GLQPNR Trigger: ACGGTTGGGCTGAAGCCCCCACACAGTGGAGTCCTG...GAATATCGGGTGAGCGTGACGGGAAGCTATAGCTGAAGGGTCGGCTCTGCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGCTTCTGAGCAGTGATGGGAAGGGGACAGACCATGAAGGTGCCAGCTATCCATGCTGTCCTGGCTaGACACTGAGGTGGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: RLLLSSDGKGTDHEGASYPCCPG*TLRWLT Trigger: TGTGAGCCACCTCAGTGTTCAGCCAGGACAGCATGG...ATAGCTGGCACCTTCATGGTCTGTCCCCTTCCCATCACTGCTCAGAAGCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCAGGAAATCATTCAAACACCCGTGCTGCAGAGCCGACCCTTCAGCTATACCGATATTCCCAGTCTaGACCCAGGACTCCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: KGRKSFKHPCCRADPSAIPIFPV*TQDSTV Trigger: CACAGTGGAGTCCTGGGTGCAGACTGGGAATATCGG...TATAGCTGAAGGGTCGGCTCTGCAGCACGGGTGTTTGAATGATTTCCTGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| 3UTR-3UTR CCA 90 bp | ATGGGCAGACAGTGTCTTGGCATAGAGCCATCCTTGTTTTCAGGCTATGCACAGAGCCCCATGCTGTCCTaGCTGAACACTGAGGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: MGRQCLGIEPSLFSGYAQSPMLS*LNTEVA Trigger: AGCCACCTCAGTGTTCAGCCAGGACAGCATGGGGCT...CTGTGCATAGCCTGAAAACAAGGATGGCTCTATGCCAAGACACTGTCTGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| 3UTR-3UTR CCA 90 bp | GTCATGAAGCTCGGTGCTCCATGCACATGGCCAAGGGCAGGAAATCATTCAAACCCCTTGACATCTAGATaGGCAGACAGTGTCTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: VMKLGAPCTWPRAGNHSNPLTSR*ADSVLA Trigger: TGCCAAGACACTGTCTGCCCATCTAGATGTCAAGGG...GTTTGAATGATTTCCTGCCCTTGGCCATGTGCATGGAGCACCGAGCTTCATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGCTTCTGAGCAGTGATGGGAAGGGGACAGACCATGAAGGTGCCAGCTATCTTGTTTTCAGGCTATaGACAGCTTCCTGTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: RLLLSSDGKGTDHEGASYLVFRL*TASCKK Trigger: TTTCTTACAGGAAGCTGTGCATAGCCTGAAAACAAG...ATAGCTGGCACCTTCATGGTCTGTCCCCTTCCCATCACTGCTCAGAAGCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| 3UTR TCA 72 bp | GTCATGTGGCCACTGGTGCTGAGTCCTGGAAGCGGGTaGAAGGAGCAAGCACCCGGTTCTGGAACGTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: VMWPLVLSPGSG*KEQAPGSGTWV Trigger: CACCCACGTTCCAGAACCGGGTGCTTGCTCCTTTCACCCGCTTCCAGGACTCAGCACCAGTGGCCACATGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| 3UTR CCA 72 bp | CTGACAGCAGGTCATGTGGCCACTGGTGCTGAGTCCTaGAAGCGGGTGAAAGGAGCAAGCACCCGGTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LTAGHVATGAES*KRVKGASTRFW Trigger: CCAGAACCGGGTGCTTGCTCCTTTCACCCGCTTCCAGGACTCAGCACCAGTGGCCACATGACCTGCTGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| 3UTR GCA 72 bp | CACATGGCCAAGGGCAGGAAATCATTCAAACACCCGTaGTGCAGAGCCGACCCTTCAGCTATAGCTTCCCGT | + |
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Preference number: 3 (lower is better) Translates to: HMAKGRKSFKHP*CRADPSAIASR Trigger: ACGGGAAGCTATAGCTGAAGGGTCGGCTCTGCAGCACGGGTGTTTGAATGATTTCCTGCCCTTGGCCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| 3UTR GCA 72 bp | GTTCTGAGTCTACCAGCACCTGGTCATGAAGCTCGGTaGTCCATGCACATGGCCAAGGGCAGGAAATCATTC | + |
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Preference number: 3 (lower is better) Translates to: VLSLPAPGHEAR*SMHMAKGRKSF Trigger: GAATGATTTCCTGCCCTTGGCCATGTGCATGGAGCACCGAGCTTCATGACCAGGTGCTGGTAGACTCAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| 3UTR-3UTR CAA 90 bp | AAATGTGTCACACTGACAGCAGGTCATGTGGCCACTGGTGCTGAGTCCTGGAAGGGCATAGAGCCATCCTaGTTTTCAGGCTATGCACAG | + |
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Preference number: 3 (lower is better) Translates to: KCVTLTAGHVATGAESWKGIEPS*FSGYAQ Trigger: CTGTGCATAGCCTGAAAACAAGGATGGCTCTATGCC...CTTCCAGGACTCAGCACCAGTGGCCACATGACCTGCTGTCAGTGTGACACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR TCA 90 bp | TGCTGCAGAGCCGACCCTTCAGCTATAGCTTCCCGTCACGCTCACCCGATATTCCTTCTCTACCCAGCTTaGGGTCTTCAGGGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CCRADPSAIASRHAHPIFLLYPA*GLQGRR Trigger: CCTCCTCCCCTGAAGACCTCAAGCTGGGTAGAGAAG...GAATATCGGGTGAGCGTGACGGGAAGCTATAGCTGAAGGGTCGGCTCTGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR CCA 90 bp | TGCTGCAGAGCCGACCCTTCAGCTATAGCTTCCCGTCACGCTCACCCGATATTCATCAGAGGCATGCCGTaGTATACAGCCCGCACCCCA | + |
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Preference number: 4 (lower is better) Translates to: CCRADPSAIASRHAHPIFIRGMP*YTARTP Trigger: TGGGGTGCGGGCTGTATACCACGGCATGCCTCTGAT...GAATATCGGGTGAGCGTGACGGGAAGCTATAGCTGAAGGGTCGGCTCTGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR CCA 90 bp | AGGCTGCTTCTGAGCAGTGATGGGAAGGGGACAGACCATGAAGGTGCCAGCTATTGTTCCTGCTCCCTCTaGATCAACTGCACCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RLLLSSDGKGTDHEGASYCSCSL*INCTRS Trigger: GGAGCGGGTGCAGTTGATCCAGAGGGAGCAGGAACA...ATAGCTGGCACCTTCATGGTCTGTCCCCTTCCCATCACTGCTCAGAAGCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR TCA 90 bp | AAATGTGTCACACTGACAGCAGGTCATGTGGCCACTGGTGCTGAGTCCTGGAAGCCATCTTCACCTTCCTaGGGCTGTGCCTCTGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: KCVTLTAGHVATGAESWKPSSPS*GCASEV Trigger: GACTTCAGAGGCACAGCCTCAGGAAGGTGAAGATGG...CTTCCAGGACTCAGCACCAGTGGCCACATGACCTGCTGTCAGTGTGACACATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR GCA 90 bp | ATCATTCAAACACCCGTGCTGCAGAGCCGACCCTTCAGCTATAGCTTCCCGTCACAGGCATCTTTTACCTaGGAGGCAAAGGCGAGACGC | + |
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Preference number: 4 (lower is better) Translates to: IIQTPVLQSRPFSYSFPSQASFT*EAKARR Trigger: GCGTCTCGCCTTTGCCTCGCAGGTAAAAGATGCCTG...TGACGGGAAGCTATAGCTGAAGGGTCGGCTCTGCAGCACGGGTGTTTGAATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR CCA 90 bp | CTGGTCATGAAGCTCGGTGCTCCATGCACATGGCCAAGGGCAGGAAATCATTCAGGGAGAGAAACTGGGTaGACGGCACGTCAAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LVMKLGAPCTWPRAGNHSGRETG*TARQRL Trigger: AAGCCTTTGACGTGCCGTCCACCCAGTTTCTCTCCC...TGAATGATTTCCTGCCCTTGGCCATGTGCATGGAGCACCGAGCTTCATGACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR TCA 90 bp | ATGAAGCTCGGTGCTCCATGCACATGGCCAAGGGCAGGAAATCATTCAAACACCCTGAGGCTGTGCCTCTaGAGTCTGGACATCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: MKLGAPCTWPRAGNHSNTLRLCL*SLDIWR Trigger: TCTCCAGATGTCCAGACTTCAGAGGCACAGCCTCAG...GGTGTTTGAATGATTTCCTGCCCTTGGCCATGTGCATGGAGCACCGAGCTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR GCA 90 bp | ATGAAGCTCGGTGCTCCATGCACATGGCCAAGGGCAGGAAATCATTCAAACACCAGCGCCTGGTACTCTTaGTTGGCCTTCTCCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: MKLGAPCTWPRAGNHSNTSAWYS*LAFSLC Trigger: ACAGAGGGAGAAGGCCAAGCAAGAGTACCAGGCGCT...GGTGTTTGAATGATTTCCTGCCCTTGGCCATGTGCATGGAGCACCGAGCTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR CCA 90 bp | ATCATTCAAACACCCGTGCTGCAGAGCCGACCCTTCAGCTATAGCTTCCCGTCATCTGTCGAGGTAGCCTaGTGTCCACATCAGAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: IIQTPVLQSRPFSYSFPSSVEVA*CPHQRH Trigger: ATGCCTCTGATGTGGACACCAGGCTACCTCGACAGA...TGACGGGAAGCTATAGCTGAAGGGTCGGCTCTGCAGCACGGGTGTTTGAATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR CCA 90 bp | AAGGGCAGGAAATCATTCAAACACCCGTGCTGCAGAGCCGACCCTTCAGCTATATGTGCCTCTGAAGTCTaGACATCTGGAGACGTCACC | + |
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Preference number: 4 (lower is better) Translates to: KGRKSFKHPCCRADPSAICASEV*TSGDVT Trigger: GGTGACGTCTCCAGATGTCCAGACTTCAGAGGCACA...TATAGCTGAAGGGTCGGCTCTGCAGCACGGGTGTTTGAATGATTTCCTGCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR CCA 90 bp | ATCATTCAAACACCCGTGCTGCAGAGCCGACCCTTCAGCTATAGCTTCCCGTCATGTCTAATCCAGCTGTaGATGGTCCAGTCTCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: IIQTPVLQSRPFSYSFPSCLIQL*MVQSLR Trigger: CCTAAGAGACTGGACCATCCACAGCTGGATTAGACA...TGACGGGAAGCTATAGCTGAAGGGTCGGCTCTGCAGCACGGGTGTTTGAATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR GCA 90 bp | CATCTAGATGGGCAGACAGTGTCTTGGCATAGAGCCATCCTTGTTTTCAGGCTACACCTTCCCGAGAAGTaGATAGCCATACAGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: HLDGQTVSWHRAILVFRLHLPEK*IAIQLG Trigger: TCCCAGCTGTATGGCTATGCACTTCTCGGGAAGGTG...TAGCCTGAAAACAAGGATGGCTCTATGCCAAGACACTGTCTGCCCATCTAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR CCA 90 bp | CAGTGTCTTGGCATAGAGCCATCCTTGTTTTCAGGCTATGCACAGCTTCCTGTAATTCCTCCTTCTCTCTaGCTTCCCACTGGTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QCLGIEPSLFSGYAQLPVIPPSL*LPTGGC Trigger: ACAGCCACCAGTGGGAAGCCAGAGAGAAGGAGGAAT...TACAGGAAGCTGTGCATAGCCTGAAAACAAGGATGGCTCTATGCCAAGACACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR CCA 90 bp | GTCATGAAGCTCGGTGCTCCATGCACATGGCCAAGGGCAGGAAATCATTCAAACGCAAGATCAGCCAGATaGTATTCCTCCTTCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VMKLGAPCTWPRAGNHSNARSAR*YSSFSL Trigger: CAGAGAGAAGGAGGAATACCATCTGGCTGATCTTGC...GTTTGAATGATTTCCTGCCCTTGGCCATGTGCATGGAGCACCGAGCTTCATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR GCA 90 bp | GGCATAGAGCCATCCTTGTTTTCAGGCTATGCACAGCTTCCTGTAAGAAAAGAATCCACATCAGAGGCATaGCGTGGTATACAGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: GIEPSLFSGYAQLPVRKESTSEA*RGIQPA Trigger: TGCGGGCTGTATACCACGGCATGCCTCTGATGTGGA...TTCTTTTCTTACAGGAAGCTGTGCATAGCCTGAAAACAAGGATGGCTCTATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR CCA 90 bp | ATCATTCAAACACCCGTGCTGCAGAGCCGACCCTTCAGCTATAGCTTCCCGTCATTAGGTACCAGCAGTTaGGACTGTGTCGAAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: IIQTPVLQSRPFSYSFPSLGTSS*DCVEIC Trigger: ACAAATTTCGACACAGTCCCAACTGCTGGTACCTAA...TGACGGGAAGCTATAGCTGAAGGGTCGGCTCTGCAGCACGGGTGTTTGAATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR GCA 90 bp | GGCATAGAGCCATCCTTGTTTTCAGGCTATGCACAGCTTCCTGTAAGAAAAGAATCCTCAGTGTCTAGCTaGTCCACCAGGTTTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GIEPSLFSGYAQLPVRKESSVSS*STRFAE Trigger: CTCAGCAAACCTGGTGGAGCAGCTAGACACTGAGGA...TTCTTTTCTTACAGGAAGCTGTGCATAGCCTGAAAACAAGGATGGCTCTATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR TCA 90 bp | ATGGGCAGACAGTGTCTTGGCATAGAGCCATCCTTGTTTTCAGGCTATGCACAGAGGCTTCTTGCATCATaGTCTCAAAAACCACGGATA | + |
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Preference number: 4 (lower is better) Translates to: MGRQCLGIEPSLFSGYAQRLLAS*SQKPRI Trigger: TATCCGTGGTTTTTGAGATCATGATGCAAGAAGCCT...CTGTGCATAGCCTGAAAACAAGGATGGCTCTATGCCAAGACACTGTCTGCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS CCA 90 bp | GGAGGCCACCCTCTCCATCACTTGGAGGGCTCTGTCGAGGTAGCCTaGTGTCCACATCAGAGGCATGCCGTGGTATACAGCCCGCACCCC | + |
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Preference number: 5 (lower is better) Translates to: GGHPLHHLEGSVEVA*CPHQRHAVVYSPHP Trigger: GGGGTGCGGGCTGTATACCACGGCATGCCTCTGATGTGGACACCAGGCTACCTCGACAGAGCCCTCCAAGTGATGGAGAGGGTGGCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS GCA 90 bp | CTTGGAGGGCTCTGTCGAGGTAGCCTGGTGTCCACATCAGAGGCATaGCGTGGTATACAGCCCGCACCCCACGCTGCAGTTCCACCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LGGLCRGSLVSTSEA*RGIQPAPHAAVPPS Trigger: GGAAGGTGGAACTGCAGCGTGGGGTGCGGGCTGTATACCACGGCATGCCTCTGATGTGGACACCAGGCTACCTCGACAGAGCCCTCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS GCA 90 bp | TTCCTCCTTCTCTCTGGCTTCCCACTGGTGGCTGTCCACGTACGCTaGAGAAAGCAGGCATCTTTTACCTGCGAGGCAAAGGCGAGACGC | + |
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Preference number: 5 (lower is better) Translates to: FLLLSGFPLVAVHVR*RKQASFTCEAKARR Trigger: GCGTCTCGCCTTTGCCTCGCAGGTAAAAGATGCCTGCTTTCTGCAGCGTACGTGGACAGCCACCAGTGGGAAGCCAGAGAGAAGGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052249.7 ENSMUST00000224660.3 |
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| CDS-3UTR CAA 90 bp | CTGGTCATGAAGCTCGGTGCTCCATGCACATGGCCAAGGGCAGGAAATCATTCAGCTGCTCCACCAGGTTaGCTGAGCCCAAGCCATCTT | + |
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Preference number: 5 (lower is better) Translates to: LVMKLGAPCTWPRAGNHSAAPPG*LSPSHL Trigger: AAGATGGCTTGGGCTCAGCAAACCTGGTGGAGCAGC...TGAATGATTTCCTGCCCTTGGCCATGTGCATGGAGCACCGAGCTTCATGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS TCA 90 bp | TCAGACTCAACTCTGTTCAGCTCCTGCAGTTTAGACCGAGAGGCCTaGAAGCGCTCGAGGTATCGGGGAAGCTTGGACTGTTCTGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: SDSTLFSSCSLDREA*KRSRYRGSLDCSGS Trigger: GGAACCAGAACAGTCCAAGCTTCCCCGATACCTCGAGCGCTTTCAGGCCTCTCGGTCTAAACTGCAGGAGCTGAACAGAGTTGAGTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR CAA 90 bp | AAGGGCAGGAAATCATTCAAACACCCGTGCTGCAGAGCCGACCCTTCAGCTATAGCCTGGTACTCTTGCTaGGCCTTCTCCCTCTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: KGRKSFKHPCCRADPSAIAWYSC*AFSLCS Trigger: GGAACAGAGGGAGAAGGCCAAGCAAGAGTACCAGGC...TATAGCTGAAGGGTCGGCTCTGCAGCACGGGTGTTTGAATGATTTCCTGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS CCA 90 bp | GCAAGATCAGCCAGATGGTATTCCTCCTTCTCTCTGGCTTCCCACTaGTGGCTGTCCACGTACGCTGCAGAAAGCAGGCATCTTTTACCT | + |
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Preference number: 5 (lower is better) Translates to: ARSARWYSSFSLASH*WLSTYAAESRHLLP Trigger: AGGTAAAAGATGCCTGCTTTCTGCAGCGTACGTGGACAGCCACCAGTGGGAAGCCAGAGAGAAGGAGGAATACCATCTGGCTGATCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052249.7 ENSMUST00000224660.3 |
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| CDS-3UTR CAA 90 bp | CAGTGTCTTGGCATAGAGCCATCCTTGTTTTCAGGCTATGCACAGCTTCCTGTACACCCTCTCCATCACTaGGAGGGCTCTGTCGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: QCLGIEPSLFSGYAQLPVHPLHH*EGSVEV Trigger: TACCTCGACAGAGCCCTCCAAGTGATGGAGAGGGTG...TACAGGAAGCTGTGCATAGCCTGAAAACAAGGATGGCTCTATGCCAAGACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS CCA 90 bp | GCTTTGTCTTGTGCTCCGTATTTCAGACACTGTCTAATCCAGCTGTaGATGGTCCAGTCTCTTAGGTACCAGCAGTTGGGACTGTGTCGA | + |
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Preference number: 5 (lower is better) Translates to: ALSCAPYFRHCLIQL*MVQSLRYQQLGLCR Trigger: TCGACACAGTCCCAACTGCTGGTACCTAAGAGACTGGACCATCCACAGCTGGATTAGACAGTGTCTGAAATACGGAGCACAAGACAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052249.7 ENSMUST00000224660.3 |
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| CDS-3UTR CAA 90 bp | ATGAAGCTCGGTGCTCCATGCACATGGCCAAGGGCAGGAAATCATTCAAACACCCTTAGGTACCAGCAGTaGGGACTGTGTCGAAATTTG | + |
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Preference number: 5 (lower is better) Translates to: MKLGAPCTWPRAGNHSNTLRYQQ*GLCRNL Trigger: CAAATTTCGACACAGTCCCAACTGCTGGTACCTAAG...GGTGTTTGAATGATTTCCTGCCCTTGGCCATGTGCATGGAGCACCGAGCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR CAA 90 bp | CATCTAGATGGGCAGACAGTGTCTTGGCATAGAGCCATCCTTGTTTTCAGGCTAGCCCACTGTGTTCCTTaGTTTCAGGCCAGAAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: HLDGQTVSWHRAILVFRLAHCVP*FQARKQ Trigger: TTGCTTTCTGGCCTGAAACAAAGGAACACAGTGGGC...TAGCCTGAAAACAAGGATGGCTCTATGCCAAGACACTGTCTGCCCATCTAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS-3UTR CAA 90 bp | ATGAAGCTCGGTGCTCCATGCACATGGCCAAGGGCAGGAAATCATTCAAACACCTTTCTTTCATACGCTTaGTCCATTAAGGATGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: MKLGAPCTWPRAGNHSNTFLSYA*SIKDAR Trigger: TCTTGCATCCTTAATGGACAAAGCGTATGAAAGAAA...GGTGTTTGAATGATTTCCTGCCCTTGGCCATGTGCATGGAGCACCGAGCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS TCA 90 bp | TCCATCAGTAAGTTGAATGTAAAGTTATCTGGAAAAATTCCATACTaGACATGGCACTCATCTCCACTACTTCTTTCCTTCCAGCTAGAT | + |
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Preference number: 5 (lower is better) Translates to: SISKLNVKLSGKIPY*TWHSSPLLLSFQLD Trigger: ATCTAGCTGGAAGGAAAGAAGTAGTGGAGATGAGTGCCATGTTCAGTATGGAATTTTTCCAGATAACTTTACATTCAACTTACTGATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224660.3 |
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| CDS GCA 72 bp | CCGCACCCCACGCTGCAGTTCCACCTTCCCGAGAAGTaGATAGCCATACAGCTGGGAACTCAGGCCCACTGT | + |
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Preference number: 6 (lower is better) Translates to: PHPTLQFHLPEK*IAIQLGTQAHC Trigger: ACAGTGGGCCTGAGTTCCCAGCTGTATGGCTATGCACTTCTCGGGAAGGTGGAACTGCAGCGTGGGGTGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052249.7 ENSMUST00000224660.3 |
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| CDS GCA 72 bp | CTCTGTCGAGGTAGCCTGGTGTCCACATCAGAGGCATaGCGTGGTATACAGCCCGCACCCCACGCTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: LCRGSLVSTSEA*RGIQPAPHAAV Trigger: AACTGCAGCGTGGGGTGCGGGCTGTATACCACGGCATGCCTCTGATGTGGACACCAGGCTACCTCGACAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS GCA 72 bp | GCCTTCTCCCTCTGTTCCTGCTCCCTCTGGATCAACTaGACCCGCTCCAGGTGCCACTCACGGAGTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: AFSLCSCSLWIN*TRSRCHSRSFC Trigger: GCAGAAACTCCGTGAGTGGCACCTGGAGCGGGTGCAGTTGATCCAGAGGGAGCAGGAACAGAGGGAGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS CAA 72 bp | GAGGTCTTCAGGGGAGGAGGCCACCCTCTCCATCACTaGGAGGGCTCTGTCGAGGTAGCCTGGTGTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: EVFRGGGHPLHH*EGSVEVAWCPH Trigger: ATGTGGACACCAGGCTACCTCGACAGAGCCCTCCAAGTGATGGAGAGGGTGGCCTCCTCCCCTGAAGACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS CAA 90 bp | ACCCAGCTTGAGGTCTTCAGGGGAGGAGGCCACCCTCTCCATCACTaGGAGGGCTCTGTCGAGGTAGCCTGGTGTCCACATCAGAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: TQLEVFRGGGHPLHH*EGSVEVAWCPHQRH Trigger: ATGCCTCTGATGTGGACACCAGGCTACCTCGACAGAGCCCTCCAAGTGATGGAGAGGGTGGCCTCCTCCCCTGAAGACCTCAAGCTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS CAA 72 bp | GCTTTCTCTGCCGCACTCAGCGCCTGGTACTCTTGCTaGGCCTTCTCCCTCTGTTCCTGCTCCCTCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: AFSAALSAWYSC*AFSLCSCSLWI Trigger: GATCCAGAGGGAGCAGGAACAGAGGGAGAAGGCCAAGCAAGAGTACCAGGCGCTGAGTGCGGCAGAGAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS TCA 72 bp | CTCCATCCAGCACATCGAGCACTTCTCTACCCAGCTTaGGGTCTTCAGGGGAGGAGGCCACCCTCTCCATCA | + |
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Preference number: 6 (lower is better) Translates to: LHPAHRALLYPA*GLQGRRPPSPS Trigger: TGATGGAGAGGGTGGCCTCCTCCCCTGAAGACCTCAAGCTGGGTAGAGAAGTGCTCGATGTGCTGGATGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS CCA 72 bp | CCTCTCCATCACTTGGAGGGCTCTGTCGAGGTAGCCTaGTGTCCACATCAGAGGCATGCCGTGGTATACAGC | + |
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Preference number: 6 (lower is better) Translates to: PLHHLEGSVEVA*CPHQRHAVVYS Trigger: GCTGTATACCACGGCATGCCTCTGATGTGGACACCAGGCTACCTCGACAGAGCCCTCCAAGTGATGGAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS TCA 72 bp | GCCCAAGCCATCTTCACCTTCCTGAGGCTGTGCCTCTaGAGTCTGGACATCTGGAGACGTCACCACCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: AQAIFTFLRLCL*SLDIWRRHHLQ Trigger: CTGAAGGTGGTGACGTCTCCAGATGTCCAGACTTCAGAGGCACAGCCTCAGGAAGGTGAAGATGGCTTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS GCA 72 bp | CTCTCTGGCTTCCCACTGGTGGCTGTCCACGTACGCTaGAGAAAGCAGGCATCTTTTACCTGCGAGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LSGFPLVAVHVR*RKQASFTCEAK Trigger: CTTTGCCTCGCAGGTAAAAGATGCCTGCTTTCTGCAGCGTACGTGGACAGCCACCAGTGGGAAGCCAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052249.7 ENSMUST00000224660.3 |
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| CDS TCA 72 bp | ACCAGGTTTGCTGAGCCCAAGCCATCTTCACCTTCCTaGGGCTGTGCCTCTGAAGTCTGGACATCTGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: TRFAEPKPSSPS*GCASEVWTSGD Trigger: GTCTCCAGATGTCCAGACTTCAGAGGCACAGCCTCAGGAAGGTGAAGATGGCTTGGGCTCAGCAAACCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS CAA 72 bp | GTTCTGGTTCCTCAGTGTCTAGCTGCTCCACCAGGTTaGCTGAGCCCAAGCCATCTTCACCTTCCTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: VLVPQCLAAPPG*LSPSHLHLPEA Trigger: AGCCTCAGGAAGGTGAAGATGGCTTGGGCTCAGCAAACCTGGTGGAGCAGCTAGACACTGAGGAACCAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS CAA 90 bp | AAGTGCATAGCCATACAGCTGGGAACTCAGGCCCACTGTGTTCCTTaGTTTCAGGCCAGAAAGCAAGAGGGACGCCCCAAAGTCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: KCIAIQLGTQAHCVP*FQARKQEGRPKVSF Trigger: GAAAGAGACTTTGGGGCGTCCCTCTTGCTTTCTGGCCTGAAACAAAGGAACACAGTGGGCCTGAGTTCCCAGCTGTATGGCTATGCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052249.7 ENSMUST00000224660.3 |
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| CDS TCA 72 bp | AGAGGGACGCCCCAAAGTCTCTTTCTTCTTCCCATGTaGGCTCCGTCTTCTCTGCTAGGCAACGGTATAAAA | + |
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Preference number: 6 (lower is better) Translates to: RGTPQSLFLLPM*APSSLLGNGIK Trigger: TTTTATACCGTTGCCTAGCAGAGAAGACGGAGCTCACATGGGAAGAAGAAAGAGACTTTGGGGCGTCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052249.7 ENSMUST00000224660.3 |
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| CDS TCA 72 bp | ACTGGGTGGACGGCACGTCAAAGGCTTCTTGCATCATaGTCTCAAAAACCACGGATAAAGCATCTTTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: TGWTARQRLLAS*SQKPRIKHLCN Trigger: ATTACAAAGATGCTTTATCCGTGGTTTTTGAGATCATGATGCAAGAAGCCTTTGACGTGCCGTCCACCCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052249.7 ENSMUST00000224660.3 |
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| CDS CCA 72 bp | TTCCAGCTAGATTCCATCATTCTAGTTCCTCTTGTATaGCCCATGGAATCCTCTAGAGTGAGGTTTACCAGA | + |
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Preference number: 6 (lower is better) Translates to: FQLDSIILVPLV*PMESSRVRFTR Trigger: TCTGGTAAACCTCACTCTAGAGGATTCCATGGGCCATACAAGAGGAACTAGAATGATGGAATCTAGCTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224660.3 |
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| CDS CAA 90 bp | AATTCCATACTGAACCTTATTAACAAGTGTATACAAGGCTTTGTCTaGTGCTCCGTATTTCAGACACTGTCTAATCCAGCTGTGGATGGT | + |
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Preference number: 6 (lower is better) Translates to: NSILNLINKCIQGFV*CSVFQTLSNPAVDG Trigger: ACCATCCACAGCTGGATTAGACAGTGTCTGAAATACGGAGCACAAGACAAAGCCTTGTATACACTTGTTAATAAGGTTCAGTATGGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS GCA 72 bp | AACCTTATTAACAAGTGTATACAAGGCTTTGTCTTGTaGTCCGTATTTCAGACACTGTCTAATCCAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: NLINKCIQGFVL*SVFQTLSNPAV Trigger: CACAGCTGGATTAGACAGTGTCTGAAATACGGAGCACAAGACAAAGCCTTGTATACACTTGTTAATAAGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052249.7 |
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| CDS CAA 72 bp | TACTCTGCAGAATCTAGATCTTCTCGGGATGCAATGTaGTCCACAAACCGTGATATTGATAAAGAACTAACA | + |
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Preference number: 6 (lower is better) Translates to: YSAESRSSRDAM*STNRDIDKELT Trigger: TGTTAGTTCTTTATCAATATCACGGTTTGTGGACAACATTGCATCCCGAGAAGATCTAGATTCTGCAGAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052249.7 ENSMUST00000224660.3 |
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| CDS CAA 72 bp | CGCCTTGATTTCTTATTAACAAGTGTATACAAGGCTTaGTCTTGTGCTCCGTATTTCAGACACTGTCTAATC | + |
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Preference number: 6 (lower is better) Translates to: RLDFLLTSVYKA*SCAPYFRHCLI Trigger: GATTAGACAGTGTCTGAAATACGGAGCACAAGACAAAGCCTTGTATACACTTGTTAATAAGAAATCAAGGCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224660.3 |
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