Pregenerated sensors for MRPS26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037740Ensembl transcript IDs: ENSMUST00000145614.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCAGCAGCAGGGCACCTTCACGTCCAGTCTCCCTGATGAGTACTTaGGCAGTTCTGGAGTCTCAGGAGGAATCAGGTTGGTCTCACACT | + |
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Preference number: 1 (lower is better) Translates to: TSSRAPSRPVSLMST*AVLESQEESGWSHT Trigger: AGTGTGAGACCAACCTGATTCCTCCTGAGACTCCAGAACTGCCCAAGTACTCATCAGGGAGACTGGACGTGAAGGTGCCCTGCTGCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CCA 90 bp | CTGCTGGAGAGCCATCAGGAGAAACAGGGCACCCTTTTTGCTTCCTaGATCTTGGACACACCAGACCCTAGCCAGAAAATCCCAGGATTG | + |
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Preference number: 1 (lower is better) Translates to: LLESHQEKQGTLFAS*ILDTPDPSQKIPGL Trigger: CAATCCTGGGATTTTCTGGCTAGGGTCTGGTGTGTCCAAGATCCAGGAAGCAAAAAGGGTGCCCTGTTTCTCCTGATGGCTCTCCAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CCA 90 bp | CAGACCAAGGTGAGAGTCCTGAAGAATGACACCAAGGCTGCCCTCTaGCTACCACTTACACACACAGAAGGGCAGCAACTGACTGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: QTKVRVLKNDTKAAL*LPLTHTEGQQLTGR Trigger: TCTTCCAGTCAGTTGCTGCCCTTCTGTGTGTGTAAGTGGTAGCCAGAGGGCAGCCTTGGTGTCATTCTTCAGGACTCTCACCTTGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CCA 90 bp | AGTGTCTCGGTTAAGTATCTTTGCTGTGACTGGGGAGATACATCCTaGCAGGAGTGGGAGTGGCAACCCATTCAGCAGAGTTCCTGGGGT | + |
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Preference number: 1 (lower is better) Translates to: SVSVKYLCCDWGDTS*QEWEWQPIQQSSWG Trigger: ACCCCAGGAACTCTGCTGAATGGGTTGCCACTCCCACTCCTGCCAGGATGTATCTCCCCAGTCACAGCAAAGATACTTAACCGAGACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CCA 90 bp | AACATGGGCTGCTCTTCCAGAGGACCTGGGTTTAATTCCAAGCCTTaGGCCCTGGAAGGGCCTTATGTAGACTGGCCTCAAGTTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: NMGCSSRGPGFNSKP*ALEGPYVDWPQVLH Trigger: ATGGAGAACTTGAGGCCAGTCTACATAAGGCCCTTCCAGGGCCCAAGGCTTGGAATTAAACCCAGGTCCTCTGGAAGAGCAGCCCATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR TCA 90 bp | ATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAACAGTCGGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ISLQMVVSHHVVAGI*TLDLRKNSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR TCA 90 bp | ACTAAACTCGGAACCTCTGGAAGAACAGTCAGTGCTCTTAACTGCTaGGCCATCTCTCCAGCCCAACCTGTCTGCTTTATAAGTGCCGGG | + |
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Preference number: 1 (lower is better) Translates to: TKLGTSGRTVSALNC*AISPAQPVCFISAG Trigger: CCCGGCACTTATAAAGCAGACAGGTTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAGAGGTTCCGAGTTTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CCA 90 bp | GAAACATTTGGCTCACACGACTCCAAGAGACTTACAAGACAAGCTTaGCTTCTAGAGGGGACACAGTCCAGTCCGATCCTCTGTGCGATA | + |
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Preference number: 1 (lower is better) Translates to: ETFGSHDSKRLTRQA*LLEGTQSSPILCAI Trigger: TATCGCACAGAGGATCGGACTGGACTGTGTCCCCTCTAGAAGCCAAGCTTGTCTTGTAAGTCTCTTGGAGTCGTGTGAGCCAAATGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CCA 90 bp | CCTGGAACTGTCACAGTATTTTTACTACTTTTAGTTGTGTTTACGTaGGTACATGCGTGTGCCTGTGGAGGCCAGAGGCACTGTACCCCC | + |
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Preference number: 1 (lower is better) Translates to: PGTVTVFLLLLVVFT*VHACACGGQRHCTP Trigger: GGGGGTACAGTGCCTCTGGCCTCCACAGGCACACGCATGTACCCACGTAAACACAACTAAAAGTAGTAAAAATACTGTGACAGTTCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CCA 90 bp | GAATCAGATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAACAGTCGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ESDLVTDGCEPPCGC*DLNSGPSEEQSGAL Trigger: AAGAGCACCCGACTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATCTGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CCA 90 bp | CTACATGCATGTGAGTGCAGGTGCCTCTGCAGGCACGGGCTGCCCTaGAACTGTCACAGTATTTTTACTACTTTTAGTTGTGTTTACGTG | + |
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Preference number: 1 (lower is better) Translates to: LHACECRCLCRHGLP*NCHSIFTTFSCVYV Trigger: CACGTAAACACAACTAAAAGTAGTAAAAATACTGTGACAGTTCCAGGGCAGCCCGTGCCTGCAGAGGCACCTGCACTCACATGCATGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CCA 90 bp | ACACAAAGAGGAAATTGCCAGCATCATCAGGAGACTGGCCAGGCTTaGGGTCGGAAAACTGCTTTGACTTCCGATTTGGTGAGAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: TQRGNCQHHQETGQA*GRKTALTSDLVRRK Trigger: TTTTCTTCTCACCAAATCGGAAGTCAAAGCAGTTTTCCGACCCCAAGCCTGGCCAGTCTCCTGATGATGCTGGCAATTTCCTCTTTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CCA 90 bp | GGGTTTAATTCCAAGCCTTGGGCCCTGGAAGGGCCTTATGTAGACTaGCCTCAAGTTCTCCATGTAGCTGAATATGACATTAAATCCCAG | + |
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Preference number: 1 (lower is better) Translates to: GFNSKPWALEGPYVD*PQVLHVAEYDIKSQ Trigger: CTGGGATTTAATGTCATATTCAGCTACATGGAGAACTTGAGGCCAGTCTACATAAGGCCCTTCCAGGGCCCAAGGCTTGGAATTAAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR TCA 90 bp | AACCAAAACAAACTTAAATCAGACCAAGGTGAGAGTCCTGAAGAATaGCACCAAGGCTGCCCTCTGGCTACCACTTACACACACAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: NQNKLKSDQGESPEE*HQGCPLATTYTHRR Trigger: CCTTCTGTGTGTGTAAGTGGTAGCCAGAGGGCAGCCTTGGTGTCATTCTTCAGGACTCTCACCTTGGTCTGATTTAAGTTTGTTTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR TCA 90 bp | CCTTTAAGGTACCACCATGTTCATTCAGCTTTTGCCTTTGCCTTTTaGGACAAGAATTTGCTATATAGCCCTGGCAGACTTTATACAGTG | + |
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Preference number: 1 (lower is better) Translates to: PLRYHHVHSAFAFAF*DKNLLYSPGRLYTV Trigger: CACTGTATAAAGTCTGCCAGGGCTATATAGCAAATTCTTGTCTCAAAAGGCAAAGGCAAAAGCTGAATGAACATGGTGGTACCTTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAGAACAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCAACCTGCCAGTAAGCAGGCACTaGCCCACCAGGCCTGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: LEEQSVLLTAEPSLQPNLPVSRH*PTRPGD Trigger: ATCCCCAGGCCTGGTGGGTCAGTGCCTGCTTACTGG...CAGGTTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGAACAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCAACCTGCTGACCCACCAGGCCTaGGGATTGAACCCAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LEEQSVLLTAEPSLQPNLLTHQA*GLNPGP Trigger: AGGCCCTGGGTTCAATCCCCAGGCCTGGTGGGTCAG...CAGGTTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CAA 90 bp | TACCAGCAGCAGGGCACCTTCACGTCCAGTCTCCCTGATGAGTACTaGGGCAGTTCTGGAGTCTCAGGAGGAATCAGGTTGGTCTCACAC | + |
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Preference number: 2 (lower is better) Translates to: YQQQGTFTSSLPDEY*GSSGVSGGIRLVSH Trigger: GTGTGAGACCAACCTGATTCCTCCTGAGACTCCAGAACTGCCCAAGTACTCATCAGGGAGACTGGACGTGAAGGTGCCCTGCTGCTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAGGAGTGGGAGTGGCAACCCATTCAGCAGAGTTCCTGGGGTTCACTGTGGGACTAGGTAGCTCCTaGCATGATCCTATCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LAGVGVATHSAEFLGFTVGLGSS*HDPISP Trigger: TGGACTGATAGGATCATGTCAGGAGCTACCTAGTCC...CACAGTGAACCCCAGGAACTCTGCTGAATGGGTTGCCACTCCCACTCCTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGGAGTGGGAGTGGCAACCCATTCAGCAGAGTTCCTGGGGTTCACTGTGGCTGAGCCATCCTCCTaGGATGTACCAATTCCTATC | + |
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Preference number: 2 (lower is better) Translates to: LAGVGVATHSAEFLGFTVAEPSS*DVPIPI Trigger: GATAGGAATTGGTACATCCCAGGAGGATGGCTCAGC...CACAGTGAACCCCAGGAACTCTGCTGAATGGGTTGCCACTCCCACTCCTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGAACAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCAACCTGCAGAACAGGGACATCTaGGAGTTCCCAGTCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LEEQSVLLTAEPSLQPNLQNRDI*EFPVRW Trigger: CCACCTGACTGGGAACTCCCAGATGTCCCTGTTCTG...CAGGTTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGGAGTGGGAGTGGCAACCCATTCAGCAGAGTTCCTGGGGTTCACTGTGACCCTTTTTGCTTCCTaGATCTTGGACACACCAGAC | + |
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Preference number: 2 (lower is better) Translates to: LAGVGVATHSAEFLGFTVTLFAS*ILDTPD Trigger: GTCTGGTGTGTCCAAGATCCAGGAAGCAAAAAGGGT...CACAGTGAACCCCAGGAACTCTGCTGAATGGGTTGCCACTCCCACTCCTGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGGAGTCTCAGGAGGAATCAGGTTGGTCTCACACTCCCTGTAGCTGTGGATGGCAGGAGTGGGAGTaGCAACCCATTCAGCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: VLESQEESGWSHTPCSCGWQEWE*QPIQQS Trigger: ACTCTGCTGAATGGGTTGCCACTCCCACTCCTGCCA...TCCACAGCTACAGGGAGTGTGAGACCAACCTGATTCCTCCTGAGACTCCAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CAA 90 bp | CCTCTGTGCGATAGGAACTTCCCAGAGTTTAATGCTGCCCTGAGTTaGTCTGTGGTGCCAGAACAGGGACATCTGGGAGTTCCCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: PLCDRNFPEFNAALS*SVVPEQGHLGVPSQ Trigger: CTGACTGGGAACTCCCAGATGTCCCTGTTCTGGCACCACAGACAAACTCAGGGCAGCATTAAACTCTGGGAAGTTCCTATCGCACAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CAA 90 bp | AGAAGTCACTGCTGGAGAGCCATCAGGAGAAACAGGGCACCCTTTTaGCTTCCTGGATCTTGGACACACCAGACCCTAGCCAGAAAATCC | + |
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Preference number: 2 (lower is better) Translates to: RSHCWRAIRRNRAPF*LPGSWTHQTLARKS Trigger: GGATTTTCTGGCTAGGGTCTGGTGTGTCCAAGATCCAGGAAGCAAAAAGGGTGCCCTGTTTCTCCTGATGGCTCTCCAGCAGTGACTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CAA 90 bp | GATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAACAGTCGGGTGCTCTTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NSGPSEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAGGAGTGGGAGTGGCAACCCATTCAGCAGAGTTCCTGGGGTTCACTGTGTATACATTGCAGTCATaGACATCTGGGTTTGATCCC | + |
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Preference number: 2 (lower is better) Translates to: LAGVGVATHSAEFLGFTVYTLQS*TSGFDP Trigger: GGGATCAAACCCAGATGTTCATGACTGCAATGTATA...CACAGTGAACCCCAGGAACTCTGCTGAATGGGTTGCCACTCCCACTCCTGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR GCA 90 bp | GACTCTGGGATGTTTTCTGTGTTGGGAATTGAACCCAGAGCCTTGGGACATGGTGTTTACGTGGGTACATaGGTGTGCCTGTGGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: DSGMFSVLGIEPRALGHGVYVGT*VCLWRP Trigger: TGGCCTCCACAGGCACACGCATGTACCCACGTAAAC...ACCATGTCCCAAGGCTCTGGGTTCAATTCCCAACACAGAAAACATCCCAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGAACAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCAACCTGTCCCTGATGAGTACTTaGGCAGTTCTGGAGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LEEQSVLLTAEPSLQPNLSLMST*AVLESQ Trigger: CTGAGACTCCAGAACTGCCCAAGTACTCATCAGGGA...CAGGTTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGAACAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCAACCTGGTGTGTCATCACTCCTaGCCACCTCTGATGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: LEEQSVLLTAEPSLQPNLVCHHS*PPLMSS Trigger: AGATGACATCAGAGGTGGCCAGGAGTGATGACACAC...CAGGTTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CAA 90 bp | GGAAACATTTGGCTCACACGACTCCAAGAGACTTACAAGACAAGCTaGGCTTCTAGAGGGGACACAGTCCAGTCCGATCCTCTGTGCGAT | + |
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Preference number: 2 (lower is better) Translates to: GNIWLTRLQETYKTS*ASRGDTVQSDPLCD Trigger: ATCGCACAGAGGATCGGACTGGACTGTGTCCCCTCTAGAAGCCAAGCTTGTCTTGTAAGTCTCTTGGAGTCGTGTGAGCCAAATGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CAA 90 bp | GAGAGCCATCAGGAGAAACAGGGCACCCTTTTTGCTTCCTGGATCTaGGACACACCAGACCCTAGCCAGAAAATCCCAGGATTGAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: ESHQEKQGTLFASWI*DTPDPSQKIPGLSK Trigger: TTTGCTCAATCCTGGGATTTTCTGGCTAGGGTCTGGTGTGTCCAAGATCCAGGAAGCAAAAAGGGTGCCCTGTTTCTCCTGATGGCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCCTCTGCAGGCACGGGCTGCCCTGGAACTGTCACAGTATTTTTACTACTTTAGTTTAATGCTGCCCTaGGTTTGTCTGTGGTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: VPLQARAALELSQYFYYFSLMLP*VCLWCQ Trigger: CTGGCACCACAGACAAACTCAGGGCAGCATTAAACT...AAAGTAGTAAAAATACTGTGACAGTTCCAGGGCAGCCCGTGCCTGCAGAGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTGGAGTCTCAGGAGGAATCAGGTTGGTCTCACACTCCCTGTAGCTGTGGAAGTGCCAGGTTCCAGTaGAAGAACCTGTCTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: VLESQEESGWSHTPCSCGSARFQ*KNLSQK Trigger: CTTTTGAGACAGGTTCTTTCACTGGAACCTGGCACT...TCCACAGCTACAGGGAGTGTGAGACCAACCTGATTCCTCCTGAGACTCCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR TCA 90 bp | GACTCTGGGATGTTTTCTGTGTTGGGAATTGAACCCAGAGCCTTGGGACATGGTAGTGCTCTTAACTGCTaGGCCATCTCTCCAGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: DSGMFSVLGIEPRALGHGSALNC*AISPAQ Trigger: TTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACT...ACCATGTCCCAAGGCTCTGGGTTCAATTCCCAACACAGAAAACATCCCAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAGAACAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCAACCTGAGAAAATCCCAGGATTaGGCAAAGCAGGTACCTAAC | + |
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Preference number: 2 (lower is better) Translates to: LEEQSVLLTAEPSLQPNLRKSQD*AKQVPN Trigger: GTTAGGTACCTGCTTTGCTCAATCCTGGGATTTTCT...CAGGTTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CAA 90 bp | AACAGCCGGGGTTTGAAGACTCTGGGATGTTTTCTGTGTTGGGAATaGAACCCAGAGCCTTGGGACATGGTAAGTAAGCACTCTACCATG | + |
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Preference number: 2 (lower is better) Translates to: NSRGLKTLGCFLCWE*NPEPWDMVSKHSTM Trigger: CATGGTAGAGTGCTTACTTACCATGTCCCAAGGCTCTGGGTTCAATTCCCAACACAGAAAACATCCCAGAGTCTTCAAACCCCGGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGTACATTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAATCAGATCTCGGAGAGTCCTGAAGAATaGCACCAAGGCTGCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: CKYIVAVFRHSRRGNQISESPEE*HQGCPL Trigger: CAGAGGGCAGCCTTGGTGTCATTCTTCAGGACTCTC...CGAGATCTGATTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAATGTACTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGTACATTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAATCAGATCTCGACCTTGAGAGTCTACTaGTCCTCTCCCCTCTACCTC | + |
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Preference number: 2 (lower is better) Translates to: CKYIVAVFRHSRRGNQISTLRVY*SSPLYL Trigger: GAGGTAGAGGGGAGAGGATCAGTAGACTCTCAAGGT...CGAGATCTGATTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAATGTACTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAGAACAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCAACCTGGCAACCACACTTAGATaGAACATTAAAATAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LEEQSVLLTAEPSLQPNLATTLR*NIKIAS Trigger: GCTGGCTATTTTAATGTTTCATCTAAGTGTGGTTGC...CAGGTTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACTAAACAAGTGAGGCTGGCGTTAAACTCCTTATCCTTTAAGGTACCACCACAGTCCGATCCTCTGTaGGATAGGAACTTCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LTKQVRLALNSLSFKVPPQSDPL*DRNFPE Trigger: CTCTGGGAAGTTCCTATCGCACAGAGGATCGGACTG...TGGTGGTACCTTAAAGGATAAGGAGTTTAACGCCAGCCTCACTTGTTTAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR GCA 90 bp | TTCACTGGAGTAAGAGGCTGCTATCACCCGCCAGGTTTTCATTTCTTAGGGATTACAGGGCACCCTTTTTaGTTCCTGGATCTTGGACAC | + |
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Preference number: 2 (lower is better) Translates to: FTGVRGCYHPPGFHFLGITGHPF*FLDLGH Trigger: GTGTCCAAGATCCAGGAAGCAAAAAGGGTGCCCTGT...AATCCCTAAGAAATGAAAACCTGGCGGGTGATAGCAGCCTCTTACTCCAGTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR TCA 90 bp | CTGACTAAACAAGTGAGGCTGGCGTTAAACTCCTTATCCTTTAAGGTACCACCAATAGCCAGCACCCACTaGGTTGGCAAGTGTACTTAC | + |
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Preference number: 2 (lower is better) Translates to: LTKQVRLALNSLSFKVPPIASTH*VGKCTY Trigger: GTAAGTACACTTGCCAACTCAGTGGGTGCTGGCTAT...TGGTGGTACCTTAAAGGATAAGGAGTTTAACGCCAGCCTCACTTGTTTAGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR GCA 90 bp | GTATTTGTTAAAGCACACAAAGAGGAAATTGCCAGCATCATCAGGAGACTGGCCGGTTACAGAAGTCACTaGTGGAGAGCCATCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: VFVKAHKEEIASIIRRLAGYRSH*WRAIRR Trigger: TCTCCTGATGGCTCTCCAGCAGTGACTTCTGTAACC...GGCCAGTCTCCTGATGATGCTGGCAATTTCCTCTTTGTGTGCTTTAACAAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR-3UTR CCA 90 bp | CTGACTAAACAAGTGAGGCTGGCGTTAAACTCCTTATCCTTTAAGGTACCACCAGTACTTGGGCAGTTCTaGAGTCTCAGGAGGAATCAG | + |
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Preference number: 2 (lower is better) Translates to: LTKQVRLALNSLSFKVPPVLGQF*SLRRNQ Trigger: CTGATTCCTCCTGAGACTCCAGAACTGCCCAAGTAC...TGGTGGTACCTTAAAGGATAAGGAGTTTAACGCCAGCCTCACTTGTTTAGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CAA 90 bp | ACACACACAGAAGGGCAGCAACTGACTGGAAGAAGCAGGTTTAGCTaGGGAGTCTACCACCTGCTGAGTAGTTCAAAATATGATAGATCA | + |
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Preference number: 2 (lower is better) Translates to: THTEGQQLTGRSRFS*GVYHLLSSSKYDRS Trigger: TGATCTATCATATTTTGAACTACTCAGCAGGTGGTAGACTCCCAAGCTAAACCTGCTTCTTCCAGTCAGTTGCTGCCCTTCTGTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| 3UTR CAA 90 bp | GATCATCTGTGTTCAATGTATTTGTTAAAGCACACAAAGAGGAAATaGCCAGCATCATCAGGAGACTGGCCAGGCTTGGGGTCGGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: DHLCSMYLLKHTKRK*PASSGDWPGLGSEN Trigger: GTTTTCCGACCCCAAGCCTGGCCAGTCTCCTGATGATGCTGGCAATTTCCTCTTTGTGTGCTTTAACAAATACATTGAACACAGATGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGACTAAACAAGTGAGGCTGGCGTTAAACTCCTTATCCTTTAAGGTACCACCATCCTGGGGTTCACTGTaGCAACAAAGATCCAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LTKQVRLALNSLSFKVPPSWGSL*QQRSRN Trigger: ATTCCTGGATCTTTGTTGTCACAGTGAACCCCAGGA...TGGTGGTACCTTAAAGGATAAGGAGTTTAACGCCAGCCTCACTTGTTTAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGACTAAACAAGTGAGGCTGGCGTTAAACTCCTTATCCTTTAAGGTACCACCATACAGAAGTCACTGCTaGAGAGCCATCAGGAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LTKQVRLALNSLSFKVPPYRSHC*RAIRRN Trigger: GTTTCTCCTGATGGCTCTCCAGCAGTGACTTCTGTA...TGGTGGTACCTTAAAGGATAAGGAGTTTAACGCCAGCCTCACTTGTTTAGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGACTAAACAAGTGAGGCTGGCGTTAAACTCCTTATCCTTTAAGGTACCACCACATAGCTCAGTTAGGTaGAACTTGCTTCTGGCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LTKQVRLALNSLSFKVPPHSSVR*NLLLAR Trigger: TCTAGCCAGAAGCAAGTTTCACCTAACTGAGCTATG...TGGTGGTACCTTAAAGGATAAGGAGTTTAACGCCAGCCTCACTTGTTTAGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR CCA 90 bp | GTATTTGTTAAAGCACACAAAGAGGAAATTGCCAGCATCATCAGGAGACTGGCCAAAGCAGGAAACATTTaGCTCACACGACTCCAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VFVKAHKEEIASIIRRLAKAGNI*LTRLQE Trigger: CTCTTGGAGTCGTGTGAGCCAAATGTTTCCTGCTTT...GGCCAGTCTCCTGATGATGCTGGCAATTTCCTCTTTGTGTGCTTTAACAAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR TCA 90 bp | GTATTTGTTAAAGCACACAAAGAGGAAATTGCCAGCATCATCAGGAGACTGGCCAGGGACAAACGCCTTTaGTTTTACAAGCAAGTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: VFVKAHKEEIASIIRRLARDKRL*FYKQVS Trigger: GCTAACTTGCTTGTAAAATCAAAGGCGTTTGTCCCT...GGCCAGTCTCCTGATGATGCTGGCAATTTCCTCTTTGTGTGCTTTAACAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTAAGTACATTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAATCAGATCTCGAAACCTTCAGCAGTATaGGAAGTAGCTACGATGGTT | + |
|
Preference number: 2 (lower is better) Translates to: CKYIVAVFRHSRRGNQISKPSAV*EVATMV Trigger: AACCATCGTAGCTACTTCTCATACTGCTGAAGGTTT...CGAGATCTGATTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAATGTACTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGACTAAACAAGTGAGGCTGGCGTTAAACTCCTTATCCTTTAAGGTACCACCATCGGTTAAGTATCTTTaGTGTGACTGGGGAGATACA | + |
|
Preference number: 2 (lower is better) Translates to: LTKQVRLALNSLSFKVPPSVKYL*CDWGDT Trigger: TGTATCTCCCCAGTCACAGCAAAGATACTTAACCGA...TGGTGGTACCTTAAAGGATAAGGAGTTTAACGCCAGCCTCACTTGTTTAGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR TCA 90 bp | GTATTTGTTAAAGCACACAAAGAGGAAATTGCCAGCATCATCAGGAGACTGGCCGAGTCTACCACCTGCTaGGTAGTTCAAAATATGATA | + |
|
Preference number: 2 (lower is better) Translates to: VFVKAHKEEIASIIRRLAESTTC*VVQNMI Trigger: TATCATATTTTGAACTACTCAGCAGGTGGTAGACTC...GGCCAGTCTCCTGATGATGCTGGCAATTTCCTCTTTGTGTGCTTTAACAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR CCA 90 bp | GTATTTGTTAAAGCACACAAAGAGGAAATTGCCAGCATCATCAGGAGACTGGCCTTCTCTGAGGCTGGCTaGCTAGATAGTATAATTAGT | + |
|
Preference number: 2 (lower is better) Translates to: VFVKAHKEEIASIIRRLAFSEAG*LDSIIS Trigger: ACTAATTATACTATCTAGCCAGCCAGCCTCAGAGAA...GGCCAGTCTCCTGATGATGCTGGCAATTTCCTCTTTGTGTGCTTTAACAAATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTAAGTACATTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAATCAGATCTCGCTAACATGTATACATTaGAGTCATGAACATCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: CKYIVAVFRHSRRGNQISLTCIH*SHEHLG Trigger: ACCCAGATGTTCATGACTGCAATGTATACATGTTAG...CGAGATCTGATTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAATGTACTTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR GCA 72 bp | TTACTCTCTGTAGCCTTCCAACCAGCTACAGCAGCCTaGCTTCCCTCAGCTGCAGTACCAGCAGCAGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLSVAFQPATAA*LPSAAVPAAGH Trigger: GTGCCCTGCTGCTGGTACTGCAGCTGAGGGAAGGCAGGCTGCTGTAGCTGGTTGGAAGGCTACAGAGAGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR GCA 72 bp | GGGCTGCGTGTAGGACGACACCTGCACCTTAATGCCTaGTTCTTCACTGGAGTAAGAGGCTGCTATCACCCG | + |
|
Preference number: 3 (lower is better) Translates to: GLRVGRHLHLNA*FFTGVRGCYHP Trigger: CGGGTGATAGCAGCCTCTTACTCCAGTGAAGAAGCAGGCATTAAGGTGCAGGTGTCGTCCTACACGCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | TGTGACTGGGGAGATACATCCTGGCAGGAGTGGGAGTaGCAACCCATTCAGCAGAGTTCCTGGGGTTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: CDWGDTSWQEWE*QPIQQSSWGSL Trigger: CAGTGAACCCCAGGAACTCTGCTGAATGGGTTGCCACTCCCACTCCTGCCAGGATGTATCTCCCCAGTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | CTTTGCTGTGACTGGGGAGATACATCCTGGCAGGAGTaGGAGTGGCAACCCATTCAGCAGAGTTCCTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LCCDWGDTSWQE*EWQPIQQSSWG Trigger: ACCCCAGGAACTCTGCTGAATGGGTTGCCACTCCCACTCCTGCCAGGATGTATCTCCCCAGTCACAGCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | CAGGGCCTATGCAGGCTAGGCAATCGCTCTACCAAGTaGACGTCTGAAGCCCACTTCCTTCAGTTTTGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: QGLCRLGNRSTK*TSEAHFLQFCR Trigger: CCGGCAAAACTGAAGGAAGTGGGCTTCAGACGTTCACTTGGTAGAGCGATTGCCTAGCCTGCATAGGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR GCA 72 bp | CACATAAGGCTACATGCATGTGAGTGCAGGTGCCTCTaGAGGCACGGGCTGCCCTGGAACTGTCACAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: HIRLHACECRCL*RHGLPWNCHSI Trigger: AATACTGTGACAGTTCCAGGGCAGCCCGTGCCTGCAGAGGCACCTGCACTCACATGCATGTAGCCTTATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | AGGGCACCTTCACGTCCAGTCTCCCTGATGAGTACTTaGGCAGTTCTGGAGTCTCAGGAGGAATCAGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RAPSRPVSLMST*AVLESQEESGW Trigger: CCAACCTGATTCCTCCTGAGACTCCAGAACTGCCCAAGTACTCATCAGGGAGACTGGACGTGAAGGTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | TATTTGTTGACATGTCCACATAAGGCTACATGCATGTaGGTGCAGGTGCCTCTGCAGGCACGGGCTGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YLLTCPHKATCM*VQVPLQARAAL Trigger: CAGGGCAGCCCGTGCCTGCAGAGGCACCTGCACTCACATGCATGTAGCCTTATGTGGACATGTCAACAAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAACAGTCGGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGI*TLDLRKNSRVL Trigger: GAGCACCCGACTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR GCA 72 bp | GCTTCTAGAGGGGACACAGTCCAGTCCGATCCTCTGTaGGATAGGAACTTCCCAGAGTTTAATGCTGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ASRGDTVQSDPL*DRNFPEFNAAL Trigger: CAGGGCAGCATTAAACTCTGGGAAGTTCCTATCGCACAGAGGATCGGACTGGACTGTGTCCCCTCTAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR GCA 72 bp | AGCCATCTCTCCAGCCCAACCTGTCTGCTTTATAAGTaGCGGGATTACTGGTGTGTGTCATCACTCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SHLSSPTCLLYK*RDYWCVSSLLA Trigger: GGCCAGGAGTGATGACACACACCAGTAATCCCGGCACTTATAAAGCAGACAGGTTGGGCTGGAGAGATGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | ACTGAGGTTGCTCTGGAAACGGCTGAGCCATCCTCCTaGGATGTACCAATTCCTATCCCAGTACACAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: TEVALETAEPSS*DVPIPIPVHRP Trigger: GGGTCTGTGTACTGGGATAGGAATTGGTACATCCCAGGAGGATGGCTCAGCCGTTTCCAGAGCAACCTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | GGCTCACACGACTCCAAGAGACTTACAAGACAAGCTTaGCTTCTAGAGGGGACACAGTCCAGTCCGATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GSHDSKRLTRQA*LLEGTQSSPIL Trigger: GAGGATCGGACTGGACTGTGTCCCCTCTAGAAGCCAAGCTTGTCTTGTAAGTCTCTTGGAGTCGTGTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | GTGAGAGTCCTGAAGAATGACACCAAGGCTGCCCTCTaGCTACCACTTACACACACAGAAGGGCAGCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: VRVLKNDTKAAL*LPLTHTEGQQL Trigger: CAGTTGCTGCCCTTCTGTGTGTGTAAGTGGTAGCCAGAGGGCAGCCTTGGTGTCATTCTTCAGGACTCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAAGAACAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCAACCTGAGAAGCAGGTTTAGCTaGGGAGTCTACCACCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LEEQSVLLTAEPSLQPNLRSRFS*GVYHLL Trigger: CAGCAGGTGGTAGACTCCCAAGCTAAACCTGCTTCT...CAGGTTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | GGAAATTGCCAGCATCATCAGGAGACTGGCCAGGCTTaGGGTCGGAAAACTGCTTTGACTTCCGATTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GNCQHHQETGQA*GRKTALTSDLV Trigger: CACCAAATCGGAAGTCAAAGCAGTTTTCCGACCCCAAGCCTGGCCAGTCTCCTGATGATGCTGGCAATTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTACAGAAGTCACTGCTGGAGAGCCATCAGGAGAAACAGGGCACCCTTTTTGCAATGCTGCCCTGAGTTaGTCTGTGGTGCCAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: VTEVTAGEPSGETGHPFCNAALS*SVVPEQ Trigger: CTGTTCTGGCACCACAGACAAACTCAGGGCAGCATT...GCAAAAAGGGTGCCCTGTTTCTCCTGATGGCTCTCCAGCAGTGACTTCTGTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAAGAACAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCAACCTGAACAGGGCACCCTTTTaGCTTCCTGGATCTTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LEEQSVLLTAEPSLQPNLNRAPF*LPGSWT Trigger: TGTCCAAGATCCAGGAAGCAAAAAGGGTGCCCTGTT...CAGGTTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | TGTGCGATAGGAACTTCCCAGAGTTTAATGCTGCCCTaGGTTTGTCTGTGGTGCCAGAACAGGGACATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CAIGTSQSLMLP*VCLWCQNRDIW Trigger: CCAGATGTCCCTGTTCTGGCACCACAGACAAACTCAGGGCAGCATTAAACTCTGGGAAGTTCCTATCGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | TCTGGCTACCACTTACACACACAGAAGGGCAGCAACTaGCTGGAAGAAGCAGGTTTAGCTTGGGAGTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: SGYHLHTQKGSN*LEEAGLAWEST Trigger: GGTAGACTCCCAAGCTAAACCTGCTTCTTCCAGTCAGTTGCTGCCCTTCTGTGTGTGTAAGTGGTAGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | TGGCAACCCATTCAGCAGAGTTCCTGGGGTTCACTGTaGCAACAAAGATCCAGGAATGGACTAGGTAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: WQPIQQSSWGSL*QQRSRNGLGSS Trigger: GGAGCTACCTAGTCCATTCCTGGATCTTTGTTGTCACAGTGAACCCCAGGAACTCTGCTGAATGGGTTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | TGTGAAAATGTTCAGTCCCCAGGAGACTGGCCCTCATaGACCAGCCTGTTAAACGGTTGTCAGCTCACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: CENVQSPGDWPS*TSLLNGCQLTD Trigger: GTCTGTGAGCTGACAACCGTTTAACAGGCTGGTTCATGAGGGCCAGTCTCCTGGGGACTGAACATTTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | AGGAGAAACAGGGCACCCTTTTTGCTTCCTGGATCTTaGACACACCAGACCCTAGCCAGAAAATCCCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: RRNRAPFLLPGS*THQTLARKSQD Trigger: ATCCTGGGATTTTCTGGCTAGGGTCTGGTGTGTCCAAGATCCAGGAAGCAAAAAGGGTGCCCTGTTTCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | AGCCATCAGGAGAAACAGGGCACCCTTTTTGCTTCCTaGATCTTGGACACACCAGACCCTAGCCAGAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: SHQEKQGTLFAS*ILDTPDPSQKI Trigger: GATTTTCTGGCTAGGGTCTGGTGTGTCCAAGATCCAGGAAGCAAAAAGGGTGCCCTGTTTCTCCTGATGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | CACACAAAGAGGAAATTGCCAGCATCATCAGGAGACTaGCCAGGCTTGGGGTCGGAAAACTGCTTTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: HTKRKLPASSGD*PGLGSENCFDF Trigger: GAAGTCAAAGCAGTTTTCCGACCCCAAGCCTGGCCAGTCTCCTGATGATGCTGGCAATTTCCTCTTTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | CTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAACAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | GGAACCTCTGGAAGAACAGTCAGTGCTCTTAACTGCTaGGCCATCTCTCCAGCCCAACCTGTCTGCTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: GTSGRTVSALNC*AISPAQPVCFI Trigger: TATAAAGCAGACAGGTTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAGAGGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR GCA 72 bp | ATGCATGTGAGTGCAGGTGCCTCTGCAGGCACGGGCTaGCCTGGAACTGTCACAGTATTTTTACTACTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: MHVSAGASAGTG*PGTVTVFLLLL Trigger: TAAAAGTAGTAAAAATACTGTGACAGTTCCAGGGCAGCCCGTGCCTGCAGAGGCACCTGCACTCACATGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR GCA 72 bp | GATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | TGTGAGTGCAGGTGCCTCTGCAGGCACGGGCTGCCCTaGAACTGTCACAGTATTTTTACTACTTTTAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: CECRCLCRHGLP*NCHSIFTTFSC Trigger: ACAACTAAAAGTAGTAAAAATACTGTGACAGTTCCAGGGCAGCCCGTGCCTGCAGAGGCACCTGCACTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR CAA 90 bp | GTATTTGTTAAAGCACACAAAGAGGAAATTGCCAGCATCATCAGGAGACTGGCCTTTGCTTCCTGGATCTaGGACACACCAGACCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VFVKAHKEEIASIIRRLAFASWI*DTPDPS Trigger: GCTAGGGTCTGGTGTGTCCAAGATCCAGGAAGCAAA...GGCCAGTCTCCTGATGATGCTGGCAATTTCCTCTTTGTGTGCTTTAACAAATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAGTACATTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAATCAGATCTCGGGACTCTTGCCAGACTaGAGATCACAGGGCATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CKYIVAVFRHSRRGNQISGLLPD*RSQGML Trigger: CAACATGCCCTGTGATCTCAAGTCTGGCAAGAGTCC...CGAGATCTGATTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAATGTACTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | AAACTTAAATCAGACCAAGGTGAGAGTCCTGAAGAATaGCACCAAGGCTGCCCTCTGGCTACCACTTACACA | + |
|
Preference number: 3 (lower is better) Translates to: KLKSDQGESPEE*HQGCPLATTYT Trigger: TGTGTAAGTGGTAGCCAGAGGGCAGCCTTGGTGTCATTCTTCAGGACTCTCACCTTGGTCTGATTTAAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR GCA 72 bp | CACCTTAATGCCTGCTTCTTCACTGGAGTAAGAGGCTaGTATCACCCGCCAGGTTTTCATTTCTTAGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: HLNACFFTGVRG*YHPPGFHFLGI Trigger: AATCCCTAAGAAATGAAAACCTGGCGGGTGATAGCAGCCTCTTACTCCAGTGAAGAAGCAGGCATTAAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | GTCACAGTATTTTTACTACTTTTAGTTGTGTTTACGTaGGTACATGCGTGTGCCTGTGGAGGCCAGAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VTVFLLLLVVFT*VHACACGGQRH Trigger: GTGCCTCTGGCCTCCACAGGCACACGCATGTACCCACGTAAACACAACTAAAAGTAGTAAAAATACTGTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCACTGGAGTAAGAGGCTGCTATCACCCGCCAGGTTTTCATTTCTTAGGGATTAAAAGCAGGAAACATTaGGCTCACACGACTCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FTGVRGCYHPPGFHFLGIKSRKH*AHTTPR Trigger: TCTTGGAGTCGTGTGAGCCAAATGTTTCCTGCTTTT...AATCCCTAAGAAATGAAAACCTGGCGGGTGATAGCAGCCTCTTACTCCAGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTGGGATGTTTTCTGTGTTGGGAATTGAACCCAGAGCCTTGGGACATGGTATGTTCATTCAGCTTTaGCCTTTGCCTTTTGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: DSGMFSVLGIEPRALGHGMFIQL*PLPFET Trigger: TGTCTCAAAAGGCAAAGGCAAAAGCTGAATGAACAT...ACCATGTCCCAAGGCTCTGGGTTCAATTCCCAACACAGAAAACATCCCAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | ATAGCCCTGGCAGACTTTATACAGTGTGCGCTAGACTaGCCTTTAACTTTGAATCCCATTACAGATGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: IALADFIQCALD*PLTLNPITDGC Trigger: ACAACCATCTGTAATGGGATTCAAAGTTAAAGGCCAGTCTAGCGCACACTGTATAAAGTCTGCCAGGGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CCA 72 bp | GGATGTTTTCTGTGTTGGGAATTGAACCCAGAGCCTTaGGACATGGTAAGTAAGCACTCTACCATGAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: GCFLCWELNPEP*DMVSKHSTMKL Trigger: TAGTTTCATGGTAGAGTGCTTACTTACCATGTCCCAAGGCTCTGGGTTCAATTCCCAACACAGAAAACATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | GAGCAAAGCAGGTACCTAACTCATAGCTCAGTTAGGTaGAACTTGCTTCTGGCTAGAAACCTAAAGACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: EQSRYLTHSSVR*NLLLARNLKTQ Trigger: TTGAGTCTTTAGGTTTCTAGCCAGAAGCAAGTTTCACCTAACTGAGCTATGAGTTAGGTACCTGCTTTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | AGTATGAGAAGTAGCTACGATGGTTTTTCCTCCGAGTaGGTGCCTGGAGTTACTGTCAATGGTATTCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: SMRSSYDGFSSE*VPGVTVNGIHV Trigger: AACATGAATACCATTGACAGTAACTCCAGGCACTCACTCGGAGGAAAAACCATCGTAGCTACTTCTCATACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | GAAGAAAATAATTCCAAATTGGACTCTTGCCAGACTTaGGATCACAGGGCATGTTGGATATCCATACGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: EENNSKLDSCQT*DHRACWISIRW Trigger: CCAGCGTATGGATATCCAACATGCCCTGTGATCTCAAGTCTGGCAAGAGTCCAATTTGGAATTATTTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR GCA 72 bp | AAAAGGCAGGCAGCTCATTCACTAACATGTATACATTaGAGTCATGAACATCTGGGTTTGATCCCTAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: KRQAAHSLTCIH*SHEHLGLIPST Trigger: GGTACTAGGGATCAAACCCAGATGTTCATGACTGCAATGTATACATGTTAGTGAATGAGCTGCCTGCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGACTAAACAAGTGAGGCTGGCGTTAAACTCCTTATCCTTTAAGGTACCACCACTGTGTTCAATGTATTaGTTAAAGCACACAAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LTKQVRLALNSLSFKVPPLCSMY*LKHTKR Trigger: CCTCTTTGTGTGCTTTAACAAATACATTGAACACAG...TGGTGGTACCTTAAAGGATAAGGAGTTTAACGCCAGCCTCACTTGTTTAGTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | TATTTGAGAAACAAACATAAGGAAGACCATCAGGTATaGCTTTTAAACAGCCGGGGTTTGAAGACTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: YLRNKHKEDHQV*LLNSRGLKTLG Trigger: TCCCAGAGTCTTCAAACCCCGGCTGTTTAAAAGTCATACCTGATGGTCTTCCTTATGTTTGTTTCTCAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR TCA 72 bp | AACCTAAAGACTCAAATAATTAGGGACAAACGCCTTTaGTTTTACAAGCAAGTTAGCATCTGGTGTAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: NLKTQIIRDKRL*FYKQVSIWCNY Trigger: GTAGTTACACCAGATGCTAACTTGCTTGTAAAATCAAAGGCGTTTGTCCCTAATTATTTGAGTCTTTAGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCAGGAGTGGGAGTGGCAACCCATTCAGCAGAGTTCCTGGGGTTCACTGTGTCCGTGATGGCCTGCTaGGCCTTGCGCTCGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAGVGVATHSAEFLGFTVSVMAC*ALRSAR Trigger: TCTGGCCGAGCGCAAGGCGCAGCAGGCCATCACGGA...CACAGTGAACCCCAGGAACTCTGCTGAATGGGTTGCCACTCCCACTCCTGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAAGAACAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCAACCTGGGTCATGGCGGGTCTTaGGGCCGCGCACGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LEEQSVLLTAEPSLQPNLGHGGS*GRARAG Trigger: TCCTGCCCGTGCGCGGCCGCAAGACCCGCCATGACC...CAGGTTGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR CCA 90 bp | CAACTGACTGGAAGAAGCAGGTTTAGCTTGGGAGTCTACCACCTGCTGAGTAGTTTGGCAGGCGGGTCATaGCGGGTCTTGCGGCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QLTGRSRFSLGVYHLLSSLAGGS*RVLRPR Trigger: GCGCGGCCGCAAGACCCGCCATGACCCGCCTGCCAA...ACTACTCAGCAGGTGGTAGACTCCCAAGCTAAACCTGCTTCTTCCAGTCAGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CAA 72 bp | CAGGGCACCTTCACGTCCAGTCTCCCTGATGAGTACTaGGGCAGTTCTGGAGTCTCAGGAGGAATCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGTFTSSLPDEY*GSSGVSGGIRL Trigger: CAACCTGATTCCTCCTGAGACTCCAGAACTGCCCAAGTACTCATCAGGGAGACTGGACGTGAAGGTGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACTGGAGTAAGAGGCTGCTATCACCCGCCAGGTTTTCATTTCTTAGGGATCCGGCTCGGGCCTCGTaGAATTTCCTTCGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHWSKRLLSPARFSFLRDPARAS*NFLRTS Trigger: GGAGGTGCGAAGGAAATTGCACGAGGCCCGAGCCGG...ATCCCTAAGAAATGAAAACCTGGCGGGTGATAGCAGCCTCTTACTCCAGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACTGGAGTAAGAGGCTGCTATCACCCGCCAGGTTTTCATTTCTTAGGGATCACCTCCTGGGCCTGTaGTTCCAGCTGCAACCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LHWSKRLLSPARFSFLRDHLLGL*FQLQPR Trigger: GCGAGGTTGCAGCTGGAAGCACAGGCCCAGGAGGTG...ATCCCTAAGAAATGAAAACCTGGCGGGTGATAGCAGCCTCTTACTCCAGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTGGAGTCTCAGGAGGAATCAGGTTGGTCTCACACTCCCTGTAGCTGTGGATCTTGCTCTTTCAGTTaGACCCAAGCCTGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLESQEESGWSHTPCSCGSCSFS*TQACSS Trigger: GGAGGAGCAGGCTTGGGTGCAACTGAAAGAGCAAGA...TCCACAGCTACAGGGAGTGTGAGACCAACCTGATTCCTCCTGAGACTCCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCAGGAGTGGGAGTGGCAACCCATTCAGCAGAGTTCCTGGGGTTCACTGTGAGCTTGAGCACTTCTTaGTCTTTCAGTTGCACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAGVGVATHSAEFLGFTVSLSTS*SFSCTQ Trigger: TTGGGTGCAACTGAAAGAGCAAGAAGTGCTCAAGCT...CACAGTGAACCCCAGGAACTCTGCTGAATGGGTTGCCACTCCCACTCCTGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CAA 72 bp | TGGCTCACACGACTCCAAGAGACTTACAAGACAAGCTaGGCTTCTAGAGGGGACACAGTCCAGTCCGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLTRLQETYKTS*ASRGDTVQSDP Trigger: AGGATCGGACTGGACTGTGTCCCCTCTAGAAGCCAAGCTTGTCTTGTAAGTCTCTTGGAGTCGTGTGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CAA 72 bp | CAGGAGAAACAGGGCACCCTTTTTGCTTCCTGGATCTaGGACACACCAGACCCTAGCCAGAAAATCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QEKQGTLFASWI*DTPDPSQKIPG Trigger: TCCTGGGATTTTCTGGCTAGGGTCTGGTGTGTCCAAGATCCAGGAAGCAAAAAGGGTGCCCTGTTTCTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CAA 72 bp | GCTCCTGACATGATCCTATCAGTCCACCTCAGATATTaGAATGCAGGGCCTGTGTTCCCCAGTCAGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: APDMILSVHLRY*NAGPVFPSQGQ Trigger: CTGTCCCTGACTGGGGAACACAGGCCCTGCATTCAAATATCTGAGGTGGACTGATAGGATCATGTCAGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAACAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSEEQSGA Trigger: AGCACCCGACTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR GCA 90 bp | CTGACTAAACAAGTGAGGCTGGCGTTAAACTCCTTATCCTTTAAGGTACCACCATGGGCCTCAGCCTTCTaGACCTCCTGGGCCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTKQVRLALNSLSFKVPPWASAF*TSWACA Trigger: AGCACAGGCCCAGGAGGTGCAGAAGGCTGAGGCCCA...TGGTGGTACCTTAAAGGATAAGGAGTTTAACGCCAGCCTCACTTGTTTAGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR TCA 90 bp | CAACTGACTGGAAGAAGCAGGTTTAGCTTGGGAGTCTACCACCTGCTGAGTAGTCCTCCTCCTGCAGCTTaGGCACTTCTTGCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLTGRSRFSLGVYHLLSSPPPAA*ALLALS Trigger: TGAAAGAGCAAGAAGTGCTCAAGCTGCAGGAGGAGG...ACTACTCAGCAGGTGGTAGACTCCCAAGCTAAACCTGCTTCTTCCAGTCAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR GCA 90 bp | TTCACTGGAGTAAGAGGCTGCTATCACCCGCCAGGTTTTCATTTCTTAGGGATTCAGTTCCTGACCACCTaGCCTTCTTTGGTGACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FTGVRGCYHPPGFHFLGIQFLTT*PSLVTA Trigger: GGCCGTCACCAAAGAAGGGCAGGTGGTCAGGAACTG...AATCCCTAAGAAATGAAAACCTGGCGGGTGATAGCAGCCTCTTACTCCAGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CAA 72 bp | AGGAAATTGCCAGCATCATCAGGAGACTGGCCAGGCTaGGGGTCGGAAAACTGCTTTGACTTCCGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKLPASSGDWPG*GSENCFDFRFG Trigger: ACCAAATCGGAAGTCAAAGCAGTTTTCCGACCCCAAGCCTGGCCAGTCTCCTGATGATGCTGGCAATTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CAA 72 bp | GATAGGAACTTCCCAGAGTTTAATGCTGCCCTGAGTTaGTCTGTGGTGCCAGAACAGGGACATCTGGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DRNFPEFNAALS*SVVPEQGHLGV Trigger: AACTCCCAGATGTCCCTGTTCTGGCACCACAGACAAACTCAGGGCAGCATTAAACTCTGGGAAGTTCCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CAA 72 bp | ATTGGACTCTTGCCAGACTTGAGATCACAGGGCATGTaGGATATCCATACGCTGGAGAAACTGAGCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: IGLLPDLRSQGM*DIHTLEKLSND Trigger: GTCATTGCTCAGTTTCTCCAGCGTATGGATATCCAACATGCCCTGTGATCTCAAGTCTGGCAAGAGTCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CAA 72 bp | GGTTTGAAGACTCTGGGATGTTTTCTGTGTTGGGAATaGAACCCAGAGCCTTGGGACATGGTAAGTAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLKTLGCFLCWE*NPEPWDMVSKH Trigger: GTGCTTACTTACCATGTCCCAAGGCTCTGGGTTCAATTCCCAACACAGAAAACATCCCAGAGTCTTCAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| 3UTR CAA 72 bp | GACTTTATACAGTGTGCGCTAGACTGGCCTTTAACTTaGAATCCCATTACAGATGGTTGTGAGCCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: DFIQCALDWPLT*NPITDGCEPPC Trigger: ACATGGTGGCTCACAACCATCTGTAATGGGATTCAAAGTTAAAGGCCAGTCTAGCGCACACTGTATAAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS CCA 90 bp | GGAGGCGTCTGCACCCGTCCGACCTTGGATTTGGCAGGCGGGTCATaGCGGGTCTTGCGGCCGCGCACGGGCAGGAGCAGCGGGGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGVCTRPTLDLAGGS*RVLRPRTGRSSGVG Trigger: CCCGACCCCGCTGCTCCTGCCCGTGCGCGGCCGCAAGACCCGCCATGACCCGCCTGCCAAATCCAAGGTCGGACGGGTGCAGACGCCTCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS GCA 90 bp | TCGTCCCGGTTCCAGGCCATCAGCTCCCGGTGCTCCGTGATGGCCTaGTGCGCCTTGCGCTCGGCCAGAACCCCGGCTCGGGCCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSRFQAISSRCSVMA*CALRSARTPARASC Trigger: GCACGAGGCCCGAGCCGGGGTTCTGGCCGAGCGCAAGGCGCAGCAGGCCATCACGGAGCACCGGGAGCTGATGGCCTGGAACCGGGACGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS CCA 90 bp | CAGGGTCCACGGCGGGAGGCGTCTGCACCCGTCCGACCTTGGATTTaGCAGGCGGGTCATGGCGGGTCTTGCGGCCGCGCACGGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QGPRREASAPVRPWI*QAGHGGSCGRARAG Trigger: TCCTGCCCGTGCGCGGCCGCAAGACCCGCCATGACCCGCCTGCCAAATCCAAGGTCGGACGGGTGCAGACGCCTCCCGCCGTGGACCCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS CCA 90 bp | ATTCCGCAGGGTCCACGGCGGGAGGCGTCTGCACCCGTCCGACCTTaGATTTGGCAGGCGGGTCATGGCGGGTCTTGCGGCCGCGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: IPQGPRREASAPVRP*IWQAGHGGSCGRAR Trigger: CCGTGCGCGGCCGCAAGACCCGCCATGACCCGCCTGCCAAATCCAAGGTCGGACGGGTGCAGACGCCTCCCGCCGTGGACCCTGCGGAAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS GCA 90 bp | TCCCGGTTCCAGGCCATCAGCTCCCGGTGCTCCGTGATGGCCTGCTaGGCCTTGCGCTCGGCCAGAACCCCGGCTCGGGCCTCGTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SRFQAISSRCSVMAC*ALRSARTPARASCN Trigger: ATTGCACGAGGCCCGAGCCGGGGTTCTGGCCGAGCGCAAGGCGCAGCAGGCCATCACGGAGCACCGGGAGCTGATGGCCTGGAACCGGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS GCA 90 bp | TCGGTCAACACGAAGAATTCCGCAGGGTCCACGGCGGGAGGCGTCTaGACCCGTCCGACCTTGGATTTGGCAGGCGGGTCATGGCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SVNTKNSAGSTAGGV*TRPTLDLAGGSWRV Trigger: GACCCGCCATGACCCGCCTGCCAAATCCAAGGTCGGACGGGTGCAGACGCCTCCCGCCGTGGACCCTGCGGAATTCTTCGTGTTGACCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS GCA 90 bp | GCCTGCTGCGCCTTGCGCTCGGCCAGAACCCCGGCTCGGGCCTCGTaGAATTTCCTTCGCACCTCCAACGTGAACTCTAGCCTGAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ACCALRSARTPARAS*NFLRTSNVNSSLRA Trigger: CGCTCTCAGGCTAGAGTTCACGTTGGAGGTGCGAAGGAAATTGCACGAGGCCCGAGCCGGGGTTCTGGCCGAGCGCAAGGCGCAGCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS GCA 90 bp | GCCTGGGCCTCAGCCTTCTGCACCTCCTGGGCCTGTGCTTCCAGCTaGAACCTCGCTATCCGTAGCTCCTGCATTCGCCGGTTCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWASAFCTSWACASS*NLAIRSSCIRRFSS Trigger: GGACGAGAACCGGCGAATGCAGGAGCTACGGATAGCGAGGTTGCAGCTGGAAGCACAGGCCCAGGAGGTGCAGAAGGCTGAGGCCCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR CAA 90 bp | CTGACTAAACAAGTGAGGCTGGCGTTAAACTCCTTATCCTTTAAGGTACCACCAATGGCCTGCTGCGCCTaGCGCTCGGCCAGAACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LTKQVRLALNSLSFKVPPMACCA*RSARTP Trigger: CGGGGTTCTGGCCGAGCGCAAGGCGCAGCAGGCCAT...TGGTGGTACCTTAAAGGATAAGGAGTTTAACGCCAGCCTCACTTGTTTAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR CAA 90 bp | GTGCCTCTGCAGGCACGGGCTGCCCTGGAACTGTCACAGTATTTTTACTACTTTCAGCTTGAGCACTTCTaGCTCTTTCAGTTGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPLQARAALELSQYFYYFQLEHF*LFQLHP Trigger: TGGGTGCAACTGAAAGAGCAAGAAGTGCTCAAGCTG...AAAGTAGTAAAAATACTGTGACAGTTCCAGGGCAGCCCGTGCCTGCAGAGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR CAA 90 bp | GTATTTGTTAAAGCACACAAAGAGGAAATTGCCAGCATCATCAGGAGACTGGCCGCCTCCTCCTGCAGCTaGAGCACTTCTTGCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFVKAHKEEIASIIRRLAASSCS*STSCSF Trigger: GAAAGAGCAAGAAGTGCTCAAGCTGCAGGAGGAGGC...GGCCAGTCTCCTGATGATGCTGGCAATTTCCTCTTTGTGTGCTTTAACAAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS-3UTR CAA 90 bp | CTGACTAAACAAGTGAGGCTGGCGTTAAACTCCTTATCCTTTAAGGTACCACCATTCTTGCTCTTTCAGTaGCACCCAAGCCTGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTKQVRLALNSLSFKVPPFLLFQ*HPSLLL Trigger: GAGGAGCAGGCTTGGGTGCAACTGAAAGAGCAAGAA...TGGTGGTACCTTAAAGGATAAGGAGTTTAACGCCAGCCTCACTTGTTTAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS GCA 72 bp | CGACCTTGGATTTGGCAGGCGGGTCATGGCGGGTCTTaGGGCCGCGCACGGGCAGGAGCAGCGGGGTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPWIWQAGHGGS*GRARAGAAGSG Trigger: CCCCGACCCCGCTGCTCCTGCCCGTGCGCGGCCGCAAGACCCGCCATGACCCGCCTGCCAAATCCAAGGTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS CAA 90 bp | GCAGGGTCCACGGCGGGAGGCGTCTGCACCCGTCCGACCTTGGATTaGGCAGGCGGGTCATGGCGGGTCTTGCGGCCGCGCACGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGSTAGGVCTRPTLD*AGGSWRVLRPRTGR Trigger: CCTGCCCGTGCGCGGCCGCAAGACCCGCCATGACCCGCCTGCCAAATCCAAGGTCGGACGGGTGCAGACGCCTCCCGCCGTGGACCCTGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS CCA 72 bp | CGGCGGGAGGCGTCTGCACCCGTCCGACCTTGGATTTaGCAGGCGGGTCATGGCGGGTCTTGCGGCCGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: RREASAPVRPWI*QAGHGGSCGRA Trigger: TGCGCGGCCGCAAGACCCGCCATGACCCGCCTGCCAAATCCAAGGTCGGACGGGTGCAGACGCCTCCCGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS CAA 72 bp | ACGGCGGGAGGCGTCTGCACCCGTCCGACCTTGGATTaGGCAGGCGGGTCATGGCGGGTCTTGCGGCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TAGGVCTRPTLD*AGGSWRVLRPR Trigger: GCGCGGCCGCAAGACCCGCCATGACCCGCCTGCCAAATCCAAGGTCGGACGGGTGCAGACGCCTCCCGCCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS CAA 72 bp | ATCAGCTCCCGGTGCTCCGTGATGGCCTGCTGCGCCTaGCGCTCGGCCAGAACCCCGGCTCGGGCCTCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ISSRCSVMACCA*RSARTPARASC Trigger: GCACGAGGCCCGAGCCGGGGTTCTGGCCGAGCGCAAGGCGCAGCAGGCCATCACGGAGCACCGGGAGCTGAT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS TCA 72 bp | CGTCCCGGTTCCAGGCCATCAGCTCCCGGTGCTCCGTaGTGGCCTGCTGCGCCTTGCGCTCGGCCAGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: RPGSRPSAPGAP*WPAAPCARPEP Trigger: GGGTTCTGGCCGAGCGCAAGGCGCAGCAGGCCATCACGGAGCACCGGGAGCTGATGGCCTGGAACCGGGACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS GCA 72 bp | TTCCAGGCCATCAGCTCCCGGTGCTCCGTGATGGCCTaGTGCGCCTTGCGCTCGGCCAGAACCCCGGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: FQAISSRCSVMA*CALRSARTPAR Trigger: CCGAGCCGGGGTTCTGGCCGAGCGCAAGGCGCAGCAGGCCATCACGGAGCACCGGGAGCTGATGGCCTGGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS CCA 72 bp | TGCACCCGTCCGACCTTGGATTTGGCAGGCGGGTCATaGCGGGTCTTGCGGCCGCGCACGGGCAGGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CTRPTLDLAGGS*RVLRPRTGRSS Trigger: GCTGCTCCTGCCCGTGCGCGGCCGCAAGACCCGCCATGACCCGCCTGCCAAATCCAAGGTCGGACGGGTGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS CCA 72 bp | GGTCCACGGCGGGAGGCGTCTGCACCCGTCCGACCTTaGATTTGGCAGGCGGGTCATGGCGGGTCTTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPRREASAPVRP*IWQAGHGGSCG Trigger: GCCGCAAGACCCGCCATGACCCGCCTGCCAAATCCAAGGTCGGACGGGTGCAGACGCCTCCCGCCGTGGACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
||
| CDS CAA 72 bp | GGGTCCACGGCGGGAGGCGTCTGCACCCGTCCGACCTaGGATTTGGCAGGCGGGTCATGGCGGGTCTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: GSTAGGVCTRPT*DLAGGSWRVLR Trigger: CCGCAAGACCCGCCATGACCCGCCTGCCAAATCCAAGGTCGGACGGGTGCAGACGCCTCCCGCCGTGGACCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| CDS CAA 90 bp | AATTCCGCAGGGTCCACGGCGGGAGGCGTCTGCACCCGTCCGACCTaGGATTTGGCAGGCGGGTCATGGCGGGTCTTGCGGCCGCGCACG | + |
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Preference number: 6 (lower is better) Translates to: NSAGSTAGGVCTRPT*DLAGGSWRVLRPRT Trigger: CGTGCGCGGCCGCAAGACCCGCCATGACCCGCCTGCCAAATCCAAGGTCGGACGGGTGCAGACGCCTCCCGCCGTGGACCCTGCGGAATT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| CDS CAA 90 bp | TTCCAGGCCATCAGCTCCCGGTGCTCCGTGATGGCCTGCTGCGCCTaGCGCTCGGCCAGAACCCCGGCTCGGGCCTCGTGCAATTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: FQAISSRCSVMACCA*RSARTPARASCNFL Trigger: AAGGAAATTGCACGAGGCCCGAGCCGGGGTTCTGGCCGAGCGCAAGGCGCAGCAGGCCATCACGGAGCACCGGGAGCTGATGGCCTGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| CDS GCA 72 bp | ACGAAGAATTCCGCAGGGTCCACGGCGGGAGGCGTCTaGACCCGTCCGACCTTGGATTTGGCAGGCGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TKNSAGSTAGGV*TRPTLDLAGGS Trigger: TGACCCGCCTGCCAAATCCAAGGTCGGACGGGTGCAGACGCCTCCCGCCGTGGACCCTGCGGAATTCTTCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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| CDS GCA 72 bp | GCCTTGCGCTCGGCCAGAACCCCGGCTCGGGCCTCGTaGAATTTCCTTCGCACCTCCAACGTGAACTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: ALRSARTPARAS*NFLRTSNVNSS Trigger: GCTAGAGTTCACGTTGGAGGTGCGAAGGAAATTGCACGAGGCCCGAGCCGGGGTTCTGGCCGAGCGCAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145614.2 |
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