Pregenerated sensors for MRPS25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014551Ensembl transcript IDs: ENSMUST00000140438.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGATTTTTGGGCTGAGATGTGGACTTGGGAGACAGGGCCCAGCTTaGCAGAGACTGCTCGTGGCCACAGTGAGCAGGCATCTGGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: GIFGLRCGLGRQGPA*QRLLVATVSRHLAW Trigger: CCAAGCCAGATGCCTGCTCACTGTGGCCACGAGCAGTCTCTGCCAAGCTGGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAAATCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CCA 90 bp | CCTAAGAGCTGGACCTATTGTCTGGGACCTGATGTCATGGGGGTCTaGAAGACTGTTGCTGCTTTCCAGTGGCTGGGTGCAGCGGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: PKSWTYCLGPDVMGV*KTVAAFQWLGAAGL Trigger: CAGCCCCGCTGCACCCAGCCACTGGAAAGCAGCAACAGTCTTCCAGACCCCCATGACATCAGGTCCCAGACAATAGGTCCAGCTCTTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR GCA 90 bp | TGGAGCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTaGAGCAGTCTCCCTTGTTTACCCTGGGCTCTGTCAGCAAGACAT | + |
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Preference number: 1 (lower is better) Translates to: WSFVWLRHGHLGSRG*SSLPCLPWALSARH Trigger: ATGTCTTGCTGACAGAGCCCAGGGTAAACAAGGGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR GCA 90 bp | TTTTCCTTAGACAGGGAGCTGCCTGGGCCAGGTGGCACTAATTCCTaGACAAGGAAGCCTCGAGCCAGAAAAGTCCAGATAGGAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: FSLDRELPGPGGTNS*TRKPRARKVQIGGQ Trigger: CTGCCCTCCTATCTGGACTTTTCTGGCTCGAGGCTTCCTTGTGCAGGAATTAGTGCCACCTGGCCCAGGCAGCTCCCTGTCTAAGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CCA 90 bp | AGCTTGGTGACTGAGACCCTTGGTCTTCTTCAAAGGCTCCAAAGCTaGAGCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: SLVTETLGLLQRLQS*SFVWLRHGHLGSRG Trigger: GCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGCTCCAGCTTTGGAGCCTTTGAAGAAGACCAAGGGTCTCAGTCACCAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR GCA 90 bp | CCTGCATCTGCTCCAGGCCACAGAAGTTATCAGTTGCCCACATGTTaGCCTGTAGCCTTGCCACAGCTTTGGCAGAAACAAGGGTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: PASAPGHRSYQLPTC*PVALPQLWQKQGSG Trigger: TCCTGACCCTTGTTTCTGCCAAAGCTGTGGCAAGGCTACAGGGCAACATGTGGGCAACTGATAACTTCTGTGGCCTGGAGCAGATGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CCA 90 bp | ATATTCGTCCCCTATGATTGGGATTTTTGGGCTGAGATGTGGACTTaGGAGACAGGGCCCAGCTTGGCAGAGACTGCTCGTGGCCACAGT | + |
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Preference number: 1 (lower is better) Translates to: IFVPYDWDFWAEMWT*ETGPSLAETARGHS Trigger: ACTGTGGCCACGAGCAGTCTCTGCCAAGCTGGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAAATCCCAATCATAGGGGACGAATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CCA 90 bp | TTGCTGATATTCGTCCCCTATGATTGGGATTTTTGGGCTGAGATGTaGACTTGGGAGACAGGGCCCAGCTTGGCAGAGACTGCTCGTGGC | + |
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Preference number: 1 (lower is better) Translates to: LLIFVPYDWDFWAEM*TWETGPSLAETARG Trigger: GCCACGAGCAGTCTCTGCCAAGCTGGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAAATCCCAATCATAGGGGACGAATATCAGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CCA 90 bp | TCTTCTTCAAAGGCTCCAAAGCTGGAGCTTCGTGTGGCTCAGACATaGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCCTTGTTTACC | + |
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Preference number: 1 (lower is better) Translates to: SSSKAPKLELRVAQT*AFGIQGLQQSPLFT Trigger: GGTAAACAAGGGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGCTCCAGCTTTGGAGCCTTTGAAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CCA 90 bp | TCAGTATCCCTAAGAGCTGGACCTATTGTCTGGGACCTGATGTCATaGGGGTCTGGAAGACTGTTGCTGCTTTCCAGTGGCTGGGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: SVSLRAGPIVWDLMS*GSGRLLLLSSGWVQ Trigger: CTGCACCCAGCCACTGGAAAGCAGCAACAGTCTTCCAGACCCCCATGACATCAGGTCCCAGACAATAGGTCCAGCTCTTAGGGATACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CCA 90 bp | TCTAGCGGGTCTTTGCTGATATTCGTCCCCTATGATTGGGATTTTTaGGCTGAGATGTGGACTTGGGAGACAGGGCCCAGCTTGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: SSGSLLIFVPYDWDF*AEMWTWETGPSLAE Trigger: CTCTGCCAAGCTGGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAAATCCCAATCATAGGGGACGAATATCAGCAAAGACCCGCTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR GCA 90 bp | AGTGAAAGCAGCAGGGCCAGTTCCAGGACTGAGACAATCACTGACTaGCTTGCACCTCCTCATCCCAAACTCTCTGATGCTGATGGTCTT | + |
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Preference number: 1 (lower is better) Translates to: SESSRASSRTETITD*LAPPHPKLSDADGL Trigger: AAGACCATCAGCATCAGAGAGTTTGGGATGAGGAGGTGCAAGGCAGTCAGTGATTGTCTCAGTCCTGGAACTGGCCCTGCTGCTTTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR GCA 90 bp | CCCAGGGGGAAGGTCCTGGTAAGACAGATGCCCACCTCTTTCCTTTaGCTATCTCCAATTACGGAGAACCAATCTCCAGATTACGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: PRGKVLVRQMPTSFL*LSPITENQSPDYGS Trigger: AGAACCGTAATCTGGAGATTGGTTCTCCGTAATTGGAGATAGGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGACCTTCCCCCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR GCA 90 bp | GCTCGTGGCCACAGTGAGCAGGCATCTGGCTTGGATGAAGCCAAGTaGAAAAATTTGCCTGACCCACAGGTTGCTCTTTGTGTTTTTGAA | + |
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Preference number: 1 (lower is better) Translates to: ARGHSEQASGLDEAK*KNLPDPQVALCVFE Trigger: TTCAAAAACACAAAGAGCAACCTGTGGGTCAGGCAAATTTTTGCACTTGGCTTCATCCAAGCCAGATGCCTGCTCACTGTGGCCACGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CCA 90 bp | GAAATAATTGTTAAGACTATAGTCCTCAGTGCCTTTGGTGAGACGTaGGTCTTTTGGCTTCAGCTTCCCACTCGTGTCCCTGGCCTCACC | + |
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Preference number: 1 (lower is better) Translates to: EIIVKTIVLSAFGET*VFWLQLPTRVPGLT Trigger: GGTGAGGCCAGGGACACGAGTGGGAAGCTGAAGCCAAAAGACCCACGTCTCACCAAAGGCACTGAGGACTATAGTCTTAACAATTATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR TCA 90 bp | GAAGTGGACAAGAGATTTGGTGACTTCAGCTCACATCTGCTGAACTaGAAGGCCAGGCCTGAAATGATCCTACTGCCCAAGGTCTCGTTA | + |
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Preference number: 1 (lower is better) Translates to: EVDKRFGDFSSHLLN*KARPEMILLPKVSL Trigger: TAACGAGACCTTGGGCAGTAGGATCATTTCAGGCCTGGCCTTTCAGTTCAGCAGATGTGAGCTGAAGTCACCAAATCTCTTGTCCACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR GCA 90 bp | TTACCACCCAGGTGGCATCTTCATTCTCAAAGCCAGAAAAATCCATaGTTACGGTTAACACAATGCCACTGGCACTCCTCCACCACATGG | + |
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Preference number: 1 (lower is better) Translates to: LPPRWHLHSQSQKNP*LRLTQCHWHSSTTW Trigger: CCATGTGGTGGAGGAGTGCCAGTGGCATTGTGTTAACCGTAAGCATGGATTTTTCTGGCTTTGAGAATGAAGATGCCACCTGGGTGGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR GCA 90 bp | AGAGATGACTTCTCCCAATATCAATGGTTTCCTCAGACCTGCATCTaGTCCAGGCCACAGAAGTTATCAGTTGCCCACATGTTGCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: RDDFSQYQWFPQTCI*SRPQKLSVAHMLPC Trigger: ACAGGGCAACATGTGGGCAACTGATAACTTCTGTGGCCTGGAGCAGATGCAGGTCTGAGGAAACCATTGATATTGGGAGAAGTCATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR TCA 90 bp | CAAATGTTACAATGTGTCGCTGTCCTTCCAGTTTGCAGTGTGTGTTaGAGAGGCTCTTCACTGCCTCTTCTCTTTCTGAGGCTGCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: QMLQCVAVLPVCSVC*RGSSLPLLFLRLQL Trigger: CAACTGCAGCCTCAGAAAGAGAAGAGGCAGTGAAGAGCCTCTTCAACACACACTGCAAACTGGAAGGACAGCGACACATTGTAACATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR GCA 90 bp | TACACATCAGAGCTACAAGCATTCCATTGCAGCCCCTACCTGGTCTaGTGCAAAATCACAAACCAGAACCAGAGTAGACAATGGAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: YTSELQAFHCSPYLV*CKITNQNQSRQWKG Trigger: GCCTTTCCATTGTCTACTCTGGTTCTGGTTTGTGATTTTGCAGCAGACCAGGTAGGGGCTGCAATGGAATGCTTGTAGCTCTGATGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR TCA 90 bp | AATAATGTCATTACAGAGCTCACAGTTGCCGGTGGCACCTCAGTGTaGAAGCTGTCACTTCAGAGGACCATCAAGTCAACTCAAGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: NNVITELTVAGGTSV*KLSLQRTIKSTQVC Trigger: ACAGACTTGAGTTGACTTGATGGTCCTCTGAAGTGACAGCTTTCACACTGAGGTGCCACCGGCAACTGTGAGCTCTGTAATGACATTATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CCA 90 bp | TCAGGAAAGTACCATCAGTTGTCATCCCAACAGCCTACTCATTCATaGACGCTAATGCTGCTGCACACACAGCTCAAGTGCTGGAATATT | + |
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Preference number: 1 (lower is better) Translates to: SGKYHQLSSQQPTHS*TLMLLHTQLKCWNI Trigger: AATATTCCAGCACTTGAGCTGTGTGTGCAGCAGCATTAGCGTCCATGAATGAGTAGGCTGTTGGGATGACAACTGATGGTACTTTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR TCA 90 bp | TTTGCAGTGTGTGTTGAAGAGGCTCTTCACTGCCTCTTCTCTTTCTaGGGCTGCAGTTGGGGTTGTGGTGTCTTGAGTTTCTATAATGAA | + |
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Preference number: 1 (lower is better) Translates to: FAVCVEEALHCLFSF*GCSWGCGVLSFYNE Trigger: TTCATTATAGAAACTCAAGACACCACAACCCCAACTGCAGCCTCAGAAAGAGAAGAGGCAGTGAAGAGCCTCTTCAACACACACTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR GCA 90 bp | AATCTCCCCTCTCTCAGGAAGCAAGAATTGCAGGCTTTAGTACACTaGCCACATGTTTGCTTTGGACTGCTAAGTAAGAACATGGACTCT | + |
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Preference number: 1 (lower is better) Translates to: NLPSLRKQELQALVH*PHVCFGLLSKNMDS Trigger: AGAGTCCATGTTCTTACTTAGCAGTCCAAAGCAAACATGTGGGCAGTGTACTAAAGCCTGCAATTCTTGCTTCCTGAGAGAGGGGAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR GCA 90 bp | GTCCAGTGTGGCATTTTCTTGGGTAATGACTGGTTGTGTAATTTCTaGCCTTCACACTGTAGAAAACACCATGGATGCCATTACCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: VQCGIFLGNDWLCNF*PSHCRKHHGCHYLL Trigger: CAGAAGGTAATGGCATCCATGGTGTTTTCTACAGTGTGAAGGGCAGAAATTACACAACCAGTCATTACCCAAGAAAATGCCACACTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CCA 90 bp | CTATATAAAATTGTTTTGAAGGGTAGTACTGCTCATGCAGTTCTCTaGTCAGTATCCCTAAGAGCTGGACCTATTGTCTGGGACCTGATG | + |
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Preference number: 1 (lower is better) Translates to: LYKIVLKGSTAHAVL*SVSLRAGPIVWDLM Trigger: CATCAGGTCCCAGACAATAGGTCCAGCTCTTAGGGATACTGACCAGAGAACTGCATGAGCAGTACTACCCTTCAAAACAATTTTATATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CCA 90 bp | CTCTCACCTAGTAAGCAAGAATTGAGAGTCAAATTACCACCCAGGTaGCATCTTCATTCTCAAAGCCAGAAAAATCCATGCTTACGGTTA | + |
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Preference number: 1 (lower is better) Translates to: LSPSKQELRVKLPPR*HLHSQSQKNPCLRL Trigger: TAACCGTAAGCATGGATTTTTCTGGCTTTGAGAATGAAGATGCCACCTGGGTGGTAATTTGACTCTCAATTCTTGCTTACTAGGTGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR TCA 90 bp | GTTCTTTTTAAACTGAATTTTCTATCTAATCAATGTCTTCAGTCCTaGAGGAGAATCTGCATTGTTGTCTGTATAGAGAGTTGCTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: VLFKLNFLSNQCLQS*RRICIVVCIESCCA Trigger: TGCACAGCAACTCTCTATACAGACAACAATGCAGATTCTCCTTCAGGACTGAAGACATTGATTAGATAGAAAATTCAGTTTAAAAAGAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR CCA 90 bp | GTCATGGGGGTCTGGAAGACTGTTGCTGCTTTCCAGTGGCTGGGTGCAGCGGGGAGACAGGGCCCAGCTTaGCAGAGACTGCTCGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: VMGVWKTVAAFQWLGAAGRQGPA*QRLLVA Trigger: GGCCACGAGCAGTCTCTGCCAAGCTGGGCCCTGTCT...CCCCGCTGCACCCAGCCACTGGAAAGCAGCAACAGTCTTCCAGACCCCCATGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR CCA 90 bp | GTCATGGGGGTCTGGAAGACTGTTGCTGCTTTCCAGTGGCTGGGTGCAGCGGGGTCCCACTCGTGTCCCTaGCCTCACCCTTTGTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: VMGVWKTVAAFQWLGAAGSHSCP*PHPLWL Trigger: CAACCACAAAGGGTGAGGCCAGGGACACGAGTGGGA...CCCCGCTGCACCCAGCCACTGGAAAGCAGCAACAGTCTTCCAGACCCCCATGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 90 bp | GGACCTATTGTCTGGGACCTGATGTCATGGGGGTCTGGAAGACTGTaGCTGCTTTCCAGTGGCTGGGTGCAGCGGGGCTGTTGGTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: GPIVWDLMSWGSGRL*LLSSGWVQRGCWCC Trigger: GCAGCACCAACAGCCCCGCTGCACCCAGCCACTGGAAAGCAGCAACAGTCTTCCAGACCCCCATGACATCAGGTCCCAGACAATAGGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 90 bp | TGGGATTTTTGGGCTGAGATGTGGACTTGGGAGACAGGGCCCAGCTaGGCAGAGACTGCTCGTGGCCACAGTGAGCAGGCATCTGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: WDFWAEMWTWETGPS*AETARGHSEQASGL Trigger: CAAGCCAGATGCCTGCTCACTGTGGCCACGAGCAGTCTCTGCCAAGCTGGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAAATCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCTGGAGGGAGATTAAGTaGAAGCAGCAGGGCCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: ASCGSDMGIWDPGAAAVSWREIK*KQQGQF Trigger: GAACTGGCCCTGCTGCTTTCACTTAATCTCCCTCCA...GGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTATGATTGGGATTTTTGGGCTGAGATGTGGACTTGGGAGACAGGGCCCAGCTGCTCGTGGCCACAGTaGGCAGGCATCTGGCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: PYDWDFWAEMWTWETGPSCSWPQ*AGIWLG Trigger: TCCAAGCCAGATGCCTGCTCACTGTGGCCACGAGCA...GCTGGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAAATCCCAATCATAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCGTTACTAACTGGGGCTaGAGAATCTCCCCTCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: ASCGSDMGIWDPGAAAVSVTNWG*RISPLS Trigger: TGAGAGAGGGGAGATTCTCCAGCCCCAGTTAGTAAC...GGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR GCA 90 bp | GTCATGGGGGTCTGGAAGACTGTTGCTGCTTTCCAGTGGCTGGGTGCAGCGGGGGTGGTTGTTCAATCTTaGCTGTGTCATTGCCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: VMGVWKTVAAFQWLGAAGVVVQS*LCHCLL Trigger: CAACAGGCAATGACACAGGCAAGATTGAACAACCAC...CCCCGCTGCACCCAGCCACTGGAAAGCAGCAACAGTCTTCCAGACCCCCATGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 90 bp | ACCTGCATCTGCTCCAGGCCACAGAAGTTATCAGTTGCCCACATGTaGCCCTGTAGCCTTGCCACAGCTTTGGCAGAAACAAGGGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: TCICSRPQKLSVAHM*PCSLATALAETRVR Trigger: CCTGACCCTTGTTTCTGCCAAAGCTGTGGCAAGGCTACAGGGCAACATGTGGGCAACTGATAACTTCTGTGGCCTGGAGCAGATGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGAAGGAGAATCTGCATTGTTGTCTGTATAGAGAGTTGCTGTGCATGGTTGTTGCACTGCCTCCCTaGGACCCCTGCACCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: VLKENLHCCLYRELLCMVVALPP*DPCTRG Trigger: GCCCCTGGTGCAGGGGTCTCAGGGAGGCAGTGCAAC...AACCATGCACAGCAACTCTCTATACAGACAACAATGCAGATTCTCCTTCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR GCA 90 bp | GTCATGGGGGTCTGGAAGACTGTTGCTGCTTTCCAGTGGCTGGGTGCAGCGGGGTCCTTTAAACAGATGTaGAAGCTGGCCTTTCCATTG | + |
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Preference number: 2 (lower is better) Translates to: VMGVWKTVAAFQWLGAAGSFKQM*KLAFPL Trigger: CAATGGAAAGGCCAGCTTGCACATCTGTTTAAAGGA...CCCCGCTGCACCCAGCCACTGGAAAGCAGCAACAGTCTTCCAGACCCCCATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR GCA 90 bp | GTCATGGGGGTCTGGAAGACTGTTGCTGCTTTCCAGTGGCTGGGTGCAGCGGGGAATAGATATTGGGGTTaGAAGGTTCCCTTAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: VMGVWKTVAAFQWLGAAGNRYWG*KVPLTG Trigger: TCCTGTTAAGGGAACCTTGCAACCCCAATATCTATT...CCCCGCTGCACCCAGCCACTGGAAAGCAGCAACAGTCTTCCAGACCCCCATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCCACACACAGCTCAAGTaGTGGAATATTTTTCTAGTC | + |
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Preference number: 2 (lower is better) Translates to: ASCGSDMGIWDPGAAAVSHTQLK*WNIFLV Trigger: GACTAGAAAAATATTCCAGCACTTGAGCTGTGTGTG...GGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCTGGCCTCACCCTTTGTGGTTGTTCAATCTTGCCTGTGTCATTGCCTGTGTGGTGAGACAGGTGTaGAGTCAGATGTCAGACCCA | + |
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Preference number: 2 (lower is better) Translates to: CPWPHPLWLFNLACVIACVVRQV*SQMSDP Trigger: TGGGTCTGACATCTGACTCCACACCTGTCTCACCAC...ACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGGGTGAGGCCAGGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 90 bp | AAAGCAGCAGGGCCAGTTCCAGGACTGAGACAATCACTGACTGCCTaGCACCTCCTCATCCCAAACTCTCTGATGCTGATGGTCTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: KAAGPVPGLRQSLTA*HLLIPNSLMLMVFR Trigger: TCTAAAGACCATCAGCATCAGAGAGTTTGGGATGAGGAGGTGCAAGGCAGTCAGTGATTGTCTCAGTCCTGGAACTGGCCCTGCTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 90 bp | TTGGCTTCAGCTTCCCACTCGTGTCCCTGGCCTCACCCTTTGTGGTaGTTCAATCTTGCCTGTGTCATTGCCTGTTGTGACAATCACACT | + |
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Preference number: 2 (lower is better) Translates to: LASASHSCPWPHPLW*FNLACVIACCDNHT Trigger: AGTGTGATTGTCACAACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGGGTGAGGCCAGGGACACGAGTGGGAAGCTGAAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 90 bp | GGTCTTTTGGCTTCAGCTTCCCACTCGTGTCCCTGGCCTCACCCTTaGTGGTTGTTCAATCTTGCCTGTGTCATTGCCTGTTGTGACAAT | + |
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Preference number: 2 (lower is better) Translates to: GLLASASHSCPWPHP*WLFNLACVIACCDN Trigger: ATTGTCACAACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGGGTGAGGCCAGGGACACGAGTGGGAAGCTGAAGCCAAAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 90 bp | TCCCAGGGGGAAGGTCCTGGTAAGACAGATGCCCACCTCTTTCCTTaGCCTATCTCCAATTACGGAGAACCAATCTCCAGATTACGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SQGEGPGKTDAHLFP*PISNYGEPISRLRF Trigger: GAACCGTAATCTGGAGATTGGTTCTCCGTAATTGGAGATAGGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGACCTTCCCCCTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTACAAGCATTCCATTGCAGCCCCTACCTGGTCTGCTGCAAAATCACAAACCCTGAAAGGCCAGGCCTaGAATGATCCTACTGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SYKHSIAAPTWSAAKSQTLKGQA*NDPTAQ Trigger: TTGGGCAGTAGGATCATTTCAGGCCTGGCCTTTCAG...GGTTTGTGATTTTGCAGCAGACCAGGTAGGGGCTGCAATGGAATGCTTGTAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCCCTGGCCTCACCCTTTGTGGTTGTTCAATCTTGCCTGTGTCATTGCCTGTGGGTCAGGACCAAAGTaGAGCTCAAGAATTTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: CPWPHPLWLFNLACVIACGSGPK*SSRICP Trigger: GGGACAAATTCTTGAGCTTCACTTTGGTCCTGACCC...ACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGGGTGAGGCCAGGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGTACAAGGTTCTGGACCTCCTCATTGAGTGCCTCCCATCAGTGTGTACTTTCCCTCAGTGCCTTTGGTaGGACGTGGGTCTTTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LYKVLDLLIECLPSVCTFPQCLW*DVGLLA Trigger: AGCCAAAAGACCCACGTCTCACCAAAGGCACTGAGG...GAAAGTACACACTGATGGGAGGCACTCAATGAGGAGGTCCAGAACCTTGTACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTGTGGTTGTTCAATCTTGCCTGTGTCATTGCCTGTTGTGACAATCACACTGGCCCTGGCCGTATCTaGCATGGAGGGAAGCAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PLWLFNLACVIACCDNHTGPGRI*HGGKQS Trigger: AGACTGCTTCCCTCCATGGCAGATACGGCCAGGGCC...AGTGTGATTGTCACAACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCAAACTCATACCTATATaGCCAAATGCCAAGAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: ASCGSDMGIWDPGAAAVSKLIPI*PNAKKS Trigger: AGACTTCTTGGCATTTGGCCATATAGGTATGAGTTT...GGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCATTGAGTGCCTCCCATCAGTGTGTACTTTCTGTGCACAACCTGTCCCTTCACAAAGGCTCCAAAGCTaGAGCTTCGTGTGGCTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LIECLPSVCTFCAQPVPSQRLQS*SFVWLR Trigger: TCTGAGCCACACGAAGCTCCAGCTTTGGAGCCTTTG...TGAAGGGACAGGTTGTGCACAGAAAGTACACACTGATGGGAGGCACTCAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CAA 90 bp | CTTACGGTTAACACAATGCCACTGGCACTCCTCCACCACATGGACTaGATGGCAAGGAAGTGGACAAGAGATTTGGTGACTTCAGCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LTVNTMPLALLHHMD*MARKWTRDLVTSAH Trigger: GTGAGCTGAAGTCACCAAATCTCTTGTCCACTTCCTTGCCATCAAGTCCATGTGGTGGAGGAGTGCCAGTGGCATTGTGTTAACCGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTGGAAAGACATCTGGTGGGAACTCAGACTGAATTCTCCATGTCATCCAGCTCACATCTGCTGAACTaGAAGGCCAGGCCTGAAATG | + |
|
Preference number: 2 (lower is better) Translates to: QVERHLVGTQTEFSMSSSSHLLN*KARPEM Trigger: CATTTCAGGCCTGGCCTTTCAGTTCAGCAGATGTGA...GCTGGATGACATGGAGAATTCAGTCTGAGTTCCCACCAGATGTCTTTCCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCAATGGCACTGATAACTaGAAAATATACCTAGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ASCGSDMGIWDPGAAAVSNGTDN*KIYLER Trigger: CCTTTCTAGGTATATTTTCCAGTTATCAGTGCCATT...GGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGTACAAGGTTCTGGACCTCCTCATTGAGTGCCTCCCATCAGTGTGTACTTTCGGTGGGAACTCAGACTaGATTCTCCATGTCATCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LYKVLDLLIECLPSVCTFGGNSD*ILHVIQ Trigger: CTGGATGACATGGAGAATTCAGTCTGAGTTCCCACC...GAAAGTACACACTGATGGGAGGCACTCAATGAGGAGGTCCAGAACCTTGTACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTGGAAAGACATCTGGTGGGAACTCAGACTGAATTCTCCATGTCATCCAGCCCCTACCTGGTCTGCTaGAAAATCACAAACCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: QVERHLVGTQTEFSMSSSPYLVC*KITNQN Trigger: GTTCTGGTTTGTGATTTTGCAGCAGACCAGGTAGGG...GCTGGATGACATGGAGAATTCAGTCTGAGTTCCCACCAGATGTCTTTCCACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTGAAGGAGAATCTGCATTGTTGTCTGTATAGAGAGTTGCTGTGCATGGTTCATCTGTTCAGCAGCTaGCAACCCTGGCCTTCATCC | + |
|
Preference number: 2 (lower is better) Translates to: VLKENLHCCLYRELLCMVHLFSS*QPWPSS Trigger: GGATGAAGGCCAGGGTTGCCAGCTGCTGAACAGATG...AACCATGCACAGCAACTCTCTATACAGACAACAATGCAGATTCTCCTTCAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | TTACCCTGGGCTCTGTCAGCAAGACATGGGGGCTCTCTGGTGGTAAAAACAAAAAACACCGTCATCAGGTaGAAAGACATCTGGTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LPWALSARHGGSLVVKTKNTVIR*KDIWWE Trigger: TTCCCACCAGATGTCTTTCCACCTGATGACGGTGTT...TTTTGTTTTTACCACCAGAGAGCCCCCATGTCTTGCTGACAGAGCCCAGGGTAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTCCCTGGCCTCACCCTTTGTGGTTGTTCAATCTTGCCTGTGTCATTGCCTGTAGCTGGCCTTTCCATTaGAGAGTTCCATCATTTATG | + |
|
Preference number: 2 (lower is better) Translates to: CPWPHPLWLFNLACVIACSWPFH*RVPSFM Trigger: CATAAATGATGGAACTCTGCAATGGAAAGGCCAGCT...ACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGGGTGAGGCCAGGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCCTGAAGGAGAATCTGCATTGTTGTCTGTATAGAGAGTTGCTGTGCATGGTTCCTCAGACCTGCATCTaGTCCAGGCCACAGAAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: VLKENLHCCLYRELLCMVPQTCI*SRPQKL Trigger: TAACTTCTGTGGCCTGGAGCAGATGCAGGTCTGAGG...AACCATGCACAGCAACTCTCTATACAGACAACAATGCAGATTCTCCTTCAGGAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTCCCTGGCCTCACCCTTTGTGGTTGTTCAATCTTGCCTGTGTCATTGCCTGTTCCAGGTTAAAAACCTaGAGAGAGCTGCCATTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: CPWPHPLWLFNLACVIACSRLKT*RELPFC Trigger: ACAAAATGGCAGCTCTCTGCAGGTTTTTAACCTGGA...ACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGGGTGAGGCCAGGGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAGCCTTTCTTCAGGAAAGTACCATCAGTTGTCATCCCAACAGCCTACTCATTCAAAACAGTCACATGTaGCCTGAACCCCTCCCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: IAFLQESTISCHPNSLLIQNSHM*PEPLPG Trigger: TCCCGGGAGGGGTTCAGGCCACATGTGACTGTTTTG...AATGAGTAGGCTGTTGGGATGACAACTGATGGTACTTTCCTGAAGAAAGGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CAA 90 bp | CGGGAGTGTGTGTGTCTTGTCTGTCTCTCACCTAGTAAGCAAGAATaGAGAGTCAAATTACCACCCAGGTGGCATCTTCATTCTCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: RECVCLVCLSPSKQE*RVKLPPRWHLHSQS Trigger: GCTTTGAGAATGAAGATGCCACCTGGGTGGTAATTTGACTCTCAATTCTTGCTTACTAGGTGAGAGACAGACAAGACACACACACTCCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CAA 90 bp | TTGAAGCACTCTTATCCCTTACACATCAGAGCTACAAGCATTCCATaGCAGCCCCTACCTGGTCTGCTGCAAAATCACAAACCAGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: LKHSYPLHIRATSIP*QPLPGLLQNHKPEP Trigger: TGGTTCTGGTTTGTGATTTTGCAGCAGACCAGGTAGGGGCTGCAATGGAATGCTTGTAGCTCTGATGTGTAAGGGATAAGAGTGCTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CAA 90 bp | TCAAATGTTACAATGTGTCGCTGTCCTTCCAGTTTGCAGTGTGTGTaGAAGAGGCTCTTCACTGCCTCTTCTCTTTCTGAGGCTGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SNVTMCRCPSSLQCV*KRLFTASSLSEAAV Trigger: AACTGCAGCCTCAGAAAGAGAAGAGGCAGTGAAGAGCCTCTTCAACACACACTGCAAACTGGAAGGACAGCGACACATTGTAACATTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | TTACCCTGGGCTCTGTCAGCAAGACATGGGGGCTCTCTGGTGGTAAAAACAAAATTGATGGCAAGGAAGTaGACAAGAGATTTGGTGACT | + |
|
Preference number: 2 (lower is better) Translates to: LPWALSARHGGSLVVKTKLMARK*TRDLVT Trigger: AGTCACCAAATCTCTTGTCCACTTCCTTGCCATCAA...TTTTGTTTTTACCACCAGAGAGCCCCCATGTCTTGCTGACAGAGCCCAGGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAGCCTTTCTTCAGGAAAGTACCATCAGTTGTCATCCCAACAGCCTACTCATTGCCTTGCCACAGCTTTaGCAGAAACAAGGGTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: IAFLQESTISCHPNSLLIALPQL*QKQGSG Trigger: TCCTGACCCTTGTTTCTGCCAAAGCTGTGGCAAGGC...AATGAGTAGGCTGTTGGGATGACAACTGATGGTACTTTCCTGAAGAAAGGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CAA 90 bp | GTCCCTGGCCTCACCCTTTGTGGTTGTTCAATCTTGCCTGTGTCATaGCCTGTTGTGACAATCACACTATTAAAAGTGGCTTTCCAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: VPGLTLCGCSILPVS*PVVTITLLKVAFQV Trigger: TACTTGGAAAGCCACTTTTAATAGTGTGATTGTCACAACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGGGTGAGGCCAGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CAA 90 bp | CCTAGTTACTCCTCAAATGTTACAATGTGTCGCTGTCCTTCCAGTTaGCAGTGTGTGTTGAAGAGGCTCTTCACTGCCTCTTCTCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: PSYSSNVTMCRCPSS*QCVLKRLFTASSLS Trigger: AGAAAGAGAAGAGGCAGTGAAGAGCCTCTTCAACACACACTGCAAACTGGAAGGACAGCGACACATTGTAACATTTGAGGAGTAACTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTTCTATGTTGTCAAGAGTTGATGCTAGCGTTGCTAATGTGAATAGATATTGGCCCAGAGCATGGTGGTaGGACAGGTGTGGAGTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TSMLSRVDASVANVNRYWPRAWW*DRCGVR Trigger: TCTGACTCCACACCTGTCTCACCACCATGCTCTGGG...CCAATATCTATTCACATTAGCAACGCTAGCATCAACTCTTGACAACATAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTTAGGAAGGGGAAACCATCAGACATTTCTAATGCTCAGCAATATGCACTTAGCCCCTACCTGGTCTaGTGCAAAATCACAAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: WLRKGKPSDISNAQQYALSPYLV*CKITNQ Trigger: CTGGTTTGTGATTTTGCAGCAGACCAGGTAGGGGCT...AAGTGCATATTGCTGAGCATTAGAAATGTCTGATGGTTTCCCCTTCCTAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CAA 90 bp | CACAGTGAGCAGGCATCTGGCTTGGATGAAGCCAAGTGCAAAAATTaGCCTGACCCACAGGTTGCTCTTTGTGTTTTTGAAGTAAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: HSEQASGLDEAKCKN*PDPQVALCVFEVNY Trigger: GTAATTTACTTCAAAAACACAAAGAGCAACCTGTGGGTCAGGCAAATTTTTGCACTTGGCTTCATCCAAGCCAGATGCCTGCTCACTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CAA 90 bp | ATAAACTTCCTTTTCACAAACCAGTTTAGCATAACTGGAAGGAGCTaGGTGACTGAGACCCTTGGTCTTCTTCAAAGGCTCCAAAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: INFLFTNQFSITGRS*VTETLGLLQRLQSW Trigger: CCAGCTTTGGAGCCTTTGAAGAAGACCAAGGGTCTCAGTCACCAAGCTCCTTCCAGTTATGCTAAACTGGTTTGTGAAAAGGAAGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTACAAGGTTCTGGACCTCCTCATTGAGTGCCTCCCATCAGTGTGTACTTTCCTAGTAAGCAAGAATTaGGAGTCAAATTACCACCCA | + |
|
Preference number: 2 (lower is better) Translates to: LYKVLDLLIECLPSVCTFLVSKN*ESNYHP Trigger: TGGGTGGTAATTTGACTCTCAATTCTTGCTTACTAG...GAAAGTACACACTGATGGGAGGCACTCAATGAGGAGGTCCAGAACCTTGTACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTTCTATGTTGTCAAGAGTTGATGCTAGCGTTGCTAATGTGAATAGATATTGGGGTGGCACTAATTCCTaGACAAGGAAGCCTCGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: TSMLSRVDASVANVNRYWGGTNS*TRKPRA Trigger: GGCTCGAGGCTTCCTTGTGCAGGAATTAGTGCCACC...CCAATATCTATTCACATTAGCAACGCTAGCATCAACTCTTGACAACATAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCATTGAGTGCCTCCCATCAGTGTGTACTTTCTGTGCACAACCTGTCCCTTCAAAATGCTGTTCAATGTaGCTTTGTTGTTGTGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: LIECLPSVCTFCAQPVPSKCCSM*LCCCGL Trigger: TAAGCCACAACAACAAAGCCACATTGAACAGCATTT...TGAAGGGACAGGTTGTGCACAGAAAGTACACACTGATGGGAGGCACTCAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTAGGAAGGGGAAACCATCAGACATTTCTAATGCTCAGCAATATGCACTTGTGGTAAACATTAGGTaGCCCTGGAAGATTCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: WLRKGKPSDISNAQQYALVVNIR*PWKILL Trigger: CAACAGAATCTTCCAGGGTCACCTAATGTTTACCAC...AAGTGCATATTGCTGAGCATTAGAAATGTCTGATGGTTTCCCCTTCCTAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTGAAGGAGAATCTGCATTGTTGTCTGTATAGAGAGTTGCTGTGCATGGTTAAATTACCACCCAGGTaGCATCTTCATTCTCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: VLKENLHCCLYRELLCMVKLPPR*HLHSQS Trigger: GCTTTGAGAATGAAGATGCCACCTGGGTGGTAATTT...AACCATGCACAGCAACTCTCTATACAGACAACAATGCAGATTCTCCTTCAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTTGGGCATTTTTAACAACCACTGCTTTATTTTGCCTCATAAACTCATACCTATTACGGTTAACACAATaGCACTGGCACTCCTCCACC | + |
|
Preference number: 2 (lower is better) Translates to: SWAFLTTTALFCLINSYLLRLTQ*HWHSST Trigger: GGTGGAGGAGTGCCAGTGGCATTGTGTTAACCGTAA...TAGGTATGAGTTTATGAGGCAAAATAAAGCAGTGGTTGTTAAAAATGCCCAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCTTGCCTGTGTCATTGCCTGTTGTGACAATCACACTATTAAAAGTGGCTTTCAAACCTGCAGAGAGCTaGCATTTTGTACAGCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ILPVSLPVVTITLLKVAFKPAES*HFVQLF Trigger: GAAAAGCTGTACAAAATGGCAGCTCTCTGCAGGTTT...GAAAGCCACTTTTAATAGTGTGATTGTCACAACAGGCAATGACACAGGCAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTAGGAAGGGGAAACCATCAGACATTTCTAATGCTCAGCAATATGCACTTGCCATTAAGACACCATaGGAACAAAAACTCAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: WLRKGKPSDISNAQQYALAIKTP*EQKLKR Trigger: TCTTTTGAGTTTTTGTTCCCATGGTGTCTTAATGGC...AAGTGCATATTGCTGAGCATTAGAAATGTCTGATGGTTTCCCCTTCCTAAGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCTATGTTGTCAAGAGTTGATGCTAGCGTTGCTAATGTGAATAGATATTGGGTGGCTTTGTTGTTGTaGCTTAATACTACCTACATG | + |
|
Preference number: 2 (lower is better) Translates to: TSMLSRVDASVANVNRYWVALLL*LNTTYM Trigger: CATGTAGGTAGTATTAAGCCACAACAACAAAGCCAC...CCAATATCTATTCACATTAGCAACGCTAGCATCAACTCTTGACAACATAGAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCTATGTTGTCAAGAGTTGATGCTAGCGTTGCTAATGTGAATAGATATTGGGCATCTAAAGAGTCTTaGGCATTTTTAACAACCACT | + |
|
Preference number: 2 (lower is better) Translates to: TSMLSRVDASVANVNRYWASKES*AFLTTT Trigger: AGTGGTTGTTAAAAATGCCCAAGACTCTTTAGATGC...CCAATATCTATTCACATTAGCAACGCTAGCATCAACTCTTGACAACATAGAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | GGATCCAGGGGCTGCAGCAGTCTCCCTTGTTTACCCTaGGCTCTGTCAGCAAGACATGGGGGCTCTCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GSRGCSSLPCLP*ALSARHGGSLV Trigger: CACCAGAGAGCCCCCATGTCTTGCTGACAGAGCCCAGGGTAAACAAGGGAGACTGCTGCAGCCCCTGGATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | AAGGCTCCAAAGCTGGAGCTTCGTGTGGCTCAGACATaGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KAPKLELRVAQT*AFGIQGLQQSP Trigger: GGGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGCTCCAGCTTTGGAGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | GTCATGGGGGTCTGGAAGACTGTTGCTGCTTTCCAGTaGCTGGGTGCAGCGGGGCTGTTGGTGCTGCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VMGVWKTVAAFQ*LGAAGLLVLLK Trigger: TTTCAGCAGCACCAACAGCCCCGCTGCACCCAGCCACTGGAAAGCAGCAACAGTCTTCCAGACCCCCATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCCAATCACTGACTGCCTaGCACCTCCTCATCCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: ASCGSDMGIWDPGAAAVSQSLTA*HLLIPN Trigger: GTTTGGGATGAGGAGGTGCAAGGCAGTCAGTGATTG...GGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCTGTTGCCCTGTAGCCTaGCCACAGCTTTGGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ASCGSDMGIWDPGAAAVSCCPVA*PQLWQK Trigger: TTTCTGCCAAAGCTGTGGCAAGGCTACAGGGCAACA...GGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR GCA 72 bp | GTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTaGAGCAGTCTCCCTTGTTTACCCTGGGCTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VWLRHGHLGSRG*SSLPCLPWALS Trigger: TGACAGAGCCCAGGGTAAACAAGGGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR GCA 72 bp | GACAGGGAGCTGCCTGGGCCAGGTGGCACTAATTCCTaGACAAGGAAGCCTCGAGCCAGAAAAGTCCAGATA | + |
|
Preference number: 3 (lower is better) Translates to: DRELPGPGGTNS*TRKPRARKVQI Trigger: TATCTGGACTTTTCTGGCTCGAGGCTTCCTTGTGCAGGAATTAGTGCCACCTGGCCCAGGCAGCTCCCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | CCCTATGATTGGGATTTTTGGGCTGAGATGTGGACTTaGGAGACAGGGCCCAGCTTGGCAGAGACTGCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: PYDWDFWAEMWT*ETGPSLAETAR Trigger: ACGAGCAGTCTCTGCCAAGCTGGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAAATCCCAATCATAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | AAAGCTGGAGCTTCGTGTGGCTCAGACATGGGCATTTaGGATCCAGGGGCTGCAGCAGTCTCCCTTGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: KAGASCGSDMGI*DPGAAAVSLVY Trigger: GTAAACAAGGGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGCTCCAGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | TGGACCTATTGTCTGGGACCTGATGTCATGGGGGTCTaGAAGACTGTTGCTGCTTTCCAGTGGCTGGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: WTYCLGPDVMGV*KTVAAFQWLGA Trigger: TGCACCCAGCCACTGGAAAGCAGCAACAGTCTTCCAGACCCCCATGACATCAGGTCCCAGACAATAGGTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR GCA 72 bp | AGCAGGGCCAGTTCCAGGACTGAGACAATCACTGACTaGCTTGCACCTCCTCATCCCAAACTCTCTGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRASSRTETITD*LAPPHPKLSDA Trigger: AGCATCAGAGAGTTTGGGATGAGGAGGTGCAAGGCAGTCAGTGATTGTCTCAGTCCTGGAACTGGCCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | CCATGCTTAGGATTTGGGCCCTGGCCGTATCTGCCATaGAGGGAAGCAGTCTATTCCCTGATACCAGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: PCLGFGPWPYLP*REAVYSLIPAI Trigger: AATGGCTGGTATCAGGGAATAGACTGCTTCCCTCCATGGCAGATACGGCCAGGGCCCAAATCCTAAGCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | TTCGTCCCCTATGATTGGGATTTTTGGGCTGAGATGTaGACTTGGGAGACAGGGCCCAGCTTGGCAGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: FVPYDWDFWAEM*TWETGPSLAET Trigger: AGTCTCTGCCAAGCTGGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAAATCCCAATCATAGGGGACGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | CTAAGAGCTGGACCTATTGTCTGGGACCTGATGTCATaGGGGTCTGGAAGACTGTTGCTGCTTTCCAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LRAGPIVWDLMS*GSGRLLLLSSG Trigger: GCCACTGGAAAGCAGCAACAGTCTTCCAGACCCCCATGACATCAGGTCCCAGACAATAGGTCCAGCTCTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCCTGGCCTCACCCTTTGTGGTTGTTCAATCTTGCCTGTGTCATTGCCTGTTCAGTTGCCCACATGTaGCCCTGTAGCCTTGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: CPWPHPLWLFNLACVIACSVAHM*PCSLAT Trigger: TGTGGCAAGGCTACAGGGCAACATGTGGGCAACTGA...ACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGGGTGAGGCCAGGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCTTGGGTAATGACTGGTaGTGTAATTTCTGCCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ASCGSDMGIWDPGAAAVSLGNDW*CNFCPS Trigger: TGAAGGGCAGAAATTACACAACCAGTCATTACCCAA...GGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR GCA 72 bp | GCTCCAGGCCACAGAAGTTATCAGTTGCCCACATGTTaGCCTGTAGCCTTGCCACAGCTTTGGCAGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: APGHRSYQLPTC*PVALPQLWQKQ Trigger: TTGTTTCTGCCAAAGCTGTGGCAAGGCTACAGGGCAACATGTGGGCAACTGATAACTTCTGTGGCCTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | ACTGAGACCCTTGGTCTTCTTCAAAGGCTCCAAAGCTaGAGCTTCGTGTGGCTCAGACATGGGCATTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TETLGLLQRLQS*SFVWLRHGHLG Trigger: TCCCAAATGCCCATGTCTGAGCCACACGAAGCTCCAGCTTTGGAGCCTTTGAAGAAGACCAAGGGTCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTACAAGGTTCTGGACCTCCTCATTGAGTGCCTCCCATCAGTGTGTACTTTCCTGCAGCAGTCTCCCTaGTTTACCCTGGGCTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LYKVLDLLIECLPSVCTFLQQSP*FTLGSV Trigger: GACAGAGCCCAGGGTAAACAAGGGAGACTGCTGCAG...GAAAGTACACACTGATGGGAGGCACTCAATGAGGAGGTCCAGAACCTTGTACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTATGATTGGGATTTTTGGGCTGAGATGTGGACTTGGGAGACAGGGCCCAGCAGTTGCCCTGTTTTGTaGCATCTAAAGAGTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PYDWDFWAEMWTWETGPSSCPVL*HLKSLG Trigger: CCCAAGACTCTTTAGATGCAACAAAACAGGGCAACT...GCTGGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAAATCCCAATCATAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | GCACTCCTCCACCACATGGACTTGATGGCAAGGAAGTaGACAAGAGATTTGGTGACTTCAGCTCACATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ALLHHMDLMARK*TRDLVTSAHIC Trigger: GCAGATGTGAGCTGAAGTCACCAAATCTCTTGTCCACTTCCTTGCCATCAAGTCCATGTGGTGGAGGAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | GTTAAGACTATAGTCCTCAGTGCCTTTGGTGAGACGTaGGTCTTTTGGCTTCAGCTTCCCACTCGTGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: VKTIVLSAFGET*VFWLQLPTRVP Trigger: AGGGACACGAGTGGGAAGCTGAAGCCAAAAGACCCACGTCTCACCAAAGGCACTGAGGACTATAGTCTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | TCTTTGCTGATATTCGTCCCCTATGATTGGGATTTTTaGGCTGAGATGTGGACTTGGGAGACAGGGCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLLIFVPYDWDF*AEMWTWETGPS Trigger: GCTGGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAAATCCCAATCATAGGGGACGAATATCAGCAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR TCA 72 bp | TGTGTTGAAGAGGCTCTTCACTGCCTCTTCTCTTTCTaGGGCTGCAGTTGGGGTTGTGGTGTCTTGAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CVEEALHCLFSF*GCSWGCGVLSF Trigger: GAAACTCAAGACACCACAACCCCAACTGCAGCCTCAGAAAGAGAAGAGGCAGTGAAGAGCCTCTTCAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR TCA 72 bp | CCCTTGATTTATGAGTCTGTGATACTCCAAGCCTTATaGAGCAGGGCTGACCTGTCTAGACACCCCTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PLIYESVILQAL*SRADLSRHPSQ Trigger: CTGAGAGGGGTGTCTAGACAGGTCAGCCCTGCTTCATAAGGCTTGGAGTATCACAGACTCATAAATCAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR GCA 72 bp | CACAGTGAGCAGGCATCTGGCTTGGATGAAGCCAAGTaGAAAAATTTGCCTGACCCACAGGTTGCTCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HSEQASGLDEAK*KNLPDPQVALC Trigger: ACAAAGAGCAACCTGTGGGTCAGGCAAATTTTTGCACTTGGCTTCATCCAAGCCAGATGCCTGCTCACTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | TACCATCAGTTGTCATCCCAACAGCCTACTCATTCATaGACGCTAATGCTGCTGCACACACAGCTCAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: YHQLSSQQPTHS*TLMLLHTQLKC Trigger: GCACTTGAGCTGTGTGTGCAGCAGCATTAGCGTCCATGAATGAGTAGGCTGTTGGGATGACAACTGATGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR TCA 72 bp | CCTAGGTGTTTTGTACAAGGTTCTGGACCTCCTCATTaGGTGCCTCCCATCAGTGTGTACTTTCTGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: PRCFVQGSGPPH*VPPISVYFLCT Trigger: TGTGCACAGAAAGTACACACTGATGGGAGGCACTCAATGAGGAGGTCCAGAACCTTGTACAAAACACCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR GCA 72 bp | CTACAAGCATTCCATTGCAGCCCCTACCTGGTCTGCTaGAAAATCACAAACCAGAACCAGAGTAGACAATGG | + |
|
Preference number: 3 (lower is better) Translates to: LQAFHCSPYLVC*KITNQNQSRQW Trigger: CCATTGTCTACTCTGGTTCTGGTTTGTGATTTTGCAGCAGACCAGGTAGGGGCTGCAATGGAATGCTTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR GCA 72 bp | TTCTCCCAATATCAATGGTTTCCTCAGACCTGCATCTaGTCCAGGCCACAGAAGTTATCAGTTGCCCACATG | + |
|
Preference number: 3 (lower is better) Translates to: FSQYQWFPQTCI*SRPQKLSVAHM Trigger: CATGTGGGCAACTGATAACTTCTGTGGCCTGGAGCAGATGCAGGTCTGAGGAAACCATTGATATTGGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | CATCAGAGCTACAAGCATTCCATTGCAGCCCCTACCTaGTCTGCTGCAAAATCACAAACCAGAACCAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: HQSYKHSIAAPT*SAAKSQTRTRV Trigger: TACTCTGGTTCTGGTTTGTGATTTTGCAGCAGACCAGGTAGGGGCTGCAATGGAATGCTTGTAGCTCTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | TCCATCAACACCGTCATCAGGTGGAAAGACATCTGGTaGGAACTCAGACTGAATTCTCCATGTCATCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SINTVIRWKDIW*ELRLNSPCHPA Trigger: TGCTGGATGACATGGAGAATTCAGTCTGAGTTCCCACCAGATGTCTTTCCACCTGATGACGGTGTTGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTGAAGGAGAATCTGCATTGTTGTCTGTATAGAGAGTTGCTGTGCATGGTTCTCCACCACATGGACTaGATGGCAAGGAAGTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: VLKENLHCCLYRELLCMVLHHMD*MARKWT Trigger: TGTCCACTTCCTTGCCATCAAGTCCATGTGGTGGAG...AACCATGCACAGCAACTCTCTATACAGACAACAATGCAGATTCTCCTTCAGGAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTAGGAAGGGGAAACCATCAGACATTTCTAATGCTCAGCAATATGCACTTGCTACAAGCATTCCATaGCAGCCCCTACCTGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WLRKGKPSDISNAQQYALATSIP*QPLPGL Trigger: CAGACCAGGTAGGGGCTGCAATGGAATGCTTGTAGC...AAGTGCATATTGCTGAGCATTAGAAATGTCTGATGGTTTCCCCTTCCTAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTATGATTGGGATTTTTGGGCTGAGATGTGGACTTGGGAGACAGGGCCCAGCCTGTACCAAATTCTATaGAAGCACTCTTATCCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PYDWDFWAEMWTWETGPSLYQIL*KHSYPL Trigger: TAAGGGATAAGAGTGCTTCAATAGAATTTGGTACAG...GCTGGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAAATCCCAATCATAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTACAAGGTTCTGGACCTCCTCATTGAGTGCCTCCCATCAGTGTGTACTTTCGGAAAGTACCATCAGTaGTCATCCCAACAGCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: LYKVLDLLIECLPSVCTFGKYHQ*SSQQPT Trigger: AGTAGGCTGTTGGGATGACAACTGATGGTACTTTCC...GAAAGTACACACTGATGGGAGGCACTCAATGAGGAGGTCCAGAACCTTGTACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTGGAAAGACATCTGGTGGGAACTCAGACTGAATTCTCCATGTCATCCAGCAAGCTGGCCTTTCCATaGCAGAGTTCCATCATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: QVERHLVGTQTEFSMSSSKLAFP*QSSIIY Trigger: ATAAATGATGGAACTCTGCAATGGAAAGGCCAGCTT...GCTGGATGACATGGAGAATTCAGTCTGAGTTCCCACCAGATGTCTTTCCACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTGAGTGCCTCCCATCAGTGTGTACTTTCTGTGCACAACCTGTCCCTTCACCTAGTAAGCAAGAATaGAGAGTCAAATTACCACCC | + |
|
Preference number: 3 (lower is better) Translates to: LIECLPSVCTFCAQPVPSPSKQE*RVKLPP Trigger: GGGTGGTAATTTGACTCTCAATTCTTGCTTACTAGG...TGAAGGGACAGGTTGTGCACAGAAAGTACACACTGATGGGAGGCACTCAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR GCA 72 bp | AACCCTGGCCTTCATCCCATGTCCTTTAAACAGATGTaGAAGCTGGCCTTTCCATTGCAGAGTTCCATCATT | + |
|
Preference number: 3 (lower is better) Translates to: NPGLHPMSFKQM*KLAFPLQSSII Trigger: AATGATGGAACTCTGCAATGGAAAGGCCAGCTTGCACATCTGTTTAAAGGACATGGGATGAAGGCCAGGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR GCA 72 bp | AGGTGGCATCTTCATTCTCAAAGCCAGAAAAATCCATaGTTACGGTTAACACAATGCCACTGGCACTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RWHLHSQSQKNP*LRLTQCHWHSS Trigger: GGAGGAGTGCCAGTGGCATTGTGTTAACCGTAAGCATGGATTTTTCTGGCTTTGAGAATGAAGATGCCACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR GCA 72 bp | CTTATCCCTTACACATCAGAGCTACAAGCATTCCATTaGAGCCCCTACCTGGTCTGCTGCAAAATCACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LIPYTSELQAFH*SPYLVCCKITN Trigger: GTTTGTGATTTTGCAGCAGACCAGGTAGGGGCTGCAATGGAATGCTTGTAGCTCTGATGTGTAAGGGATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | CTGCTAAGTAAGAACATGGACTCTCCCAGCTACATTTaGCTCACCAATAACAACAGCCCTCAACAGCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLSKNMDSPSYI*LTNNNSPQQLP Trigger: TGGAAGCTGTTGAGGGCTGTTGTTATTGGTGAGCCAAATGTAGCTGGGAGAGTCCATGTTCTTACTTAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTGTGGTTGTTCAATCTTGCCTGTGTCATTGCCTGTTGTGACAATCACACTCCCTGGAAGATTCTGTaGTCCACTGAAGAATGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PLWLFNLACVIACCDNHTPWKIL*STEEWS Trigger: ACTCCATTCTTCAGTGGACAACAGAATCTTCCAGGG...AGTGTGATTGTCACAACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCCTGGCCTCACCCTTTGTGGTTGTTCAATCTTGCCTGTGTCATTGCCTGTAACCACTGCTTTATTTaGCCTCATAAACTCATACCT | + |
|
Preference number: 3 (lower is better) Translates to: CPWPHPLWLFNLACVIACNHCFI*PHKLIP Trigger: AGGTATGAGTTTATGAGGCAAAATAAAGCAGTGGTT...ACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGGGTGAGGCCAGGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR GCA 72 bp | CAAGAATTGCAGGCTTTAGTACACTGCCCACATGTTTaGTTTGGACTGCTAAGTAAGAACATGGACTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QELQALVHCPHV*FGLLSKNMDSP Trigger: GGGAGAGTCCATGTTCTTACTTAGCAGTCCAAAGCAAACATGTGGGCAGTGTACTAAAGCCTGCAATTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTGGAAAGACATCTGGTGGGAACTCAGACTGAATTCTCCATGTCATCCAGCAGACTAAATCTTTTATaGACATCTGTTCAGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QVERHLVGTQTEFSMSSSRLNLL*TSVQQL Trigger: CAGCTGCTGAACAGATGTCAATAAAAGATTTAGTCT...GCTGGATGACATGGAGAATTCAGTCTGAGTTCCCACCAGATGTCTTTCCACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTGTGGTTGTTCAATCTTGCCTGTGTCATTGCCTGTTGTGACAATCACACTCAGTGTGGCATTTTCTaGGGTAATGACTGGTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PLWLFNLACVIACCDNHTQCGIF*GNDWLC Trigger: ACACAACCAGTCATTACCCAAGAAAATGCCACACTG...AGTGTGATTGTCACAACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR GCA 72 bp | TCTCTCAGGAAGCAAGAATTGCAGGCTTTAGTACACTaGCCACATGTTTGCTTTGGACTGCTAAGTAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLRKQELQALVH*PHVCFGLLSKN Trigger: GTTCTTACTTAGCAGTCCAAAGCAAACATGTGGGCAGTGTACTAAAGCCTGCAATTCTTGCTTCCTGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | CAAGCTGGCCTTTCCATTGCAGAGTTCCATCATTTATaGTACCAATGTAATCCATCTCCACCAGTCAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: QAGLSIAEFHHL*YQCNPSPPVKC Trigger: GCATTTGACTGGTGGAGATGGATTACATTGGTACCATAAATGATGGAACTCTGCAATGGAAAGGCCAGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | AGAGTTGATGCTAGCGTTGCTAATGTGAATAGATATTaGGGTTGCAAGGTTCCCTTAACAGGAACGTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RVDASVANVNRY*GCKVPLTGTLC Trigger: GCACAACGTTCCTGTTAAGGGAACCTTGCAACCCCAATATCTATTCACATTAGCAACGCTAGCATCAACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTAGGAAGGGGAAACCATCAGACATTTCTAATGCTCAGCAATATGCACTTAAGTGGACAAGAGATTaGGTGACTTCAGCTCACATC | + |
|
Preference number: 3 (lower is better) Translates to: WLRKGKPSDISNAQQYALKWTRD*VTSAHI Trigger: GATGTGAGCTGAAGTCACCAAATCTCTTGTCCACTT...AAGTGCATATTGCTGAGCATTAGAAATGTCTGATGGTTTCCCCTTCCTAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTAGGAAGGGGAAACCATCAGACATTTCTAATGCTCAGCAATATGCACTTCAAGAATTTGTCCCCTaGGGACCTGAACTTTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: WLRKGKPSDISNAQQYALQEFVP*GPELYS Trigger: AGAATAAAGTTCAGGTCCCAAGGGGACAAATTCTTG...AAGTGCATATTGCTGAGCATTAGAAATGTCTGATGGTTTCCCCTTCCTAAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR TCA 72 bp | AGCCACACTGTGCATGTCCAGAGTTACAGGCCTAGATaGCTGAATGAATGTACATGTGTTCATATTATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SHTVHVQSYRPR*LNECTCVHIIF Trigger: GAAGATAATATGAACACATGTACATTCATTCAGTCATCTAGGCCTGTAACTCTGGACATGCACAGTGTGGCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | ATCTGCATTGTTGTCTGTATAGAGAGTTGCTGTGCATaGTTACGAGCGCCTTTTACTAAATGCTGTTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: ICIVVCIESCCA*LRAPFTKCCSM Trigger: CATTGAACAGCATTTAGTAAAAGGCGCTCGTAACCATGCACAGCAACTCTCTATACAGACAACAATGCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTGCCTGTGTCATTGCCTGTTGTGACAATCACACTATTAAAAGTGGCTTTCTTCAATGTGGCTTTGTaGTTGTGGCTTAATACTACC | + |
|
Preference number: 3 (lower is better) Translates to: ILPVSLPVVTITLLKVAFFNVAL*LWLNTT Trigger: GGTAGTATTAAGCCACAACAACAAAGCCACATTGAA...GAAAGCCACTTTTAATAGTGTGATTGTCACAACAGGCAATGACACAGGCAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCTATGTTGTCAAGAGTTGATGCTAGCGTTGCTAATGTGAATAGATATTGGATCTTGCCTGTGTCATaGCCTGTTGTGACAATCACA | + |
|
Preference number: 3 (lower is better) Translates to: TSMLSRVDASVANVNRYWILPVS*PVVTIT Trigger: TGTGATTGTCACAACAGGCAATGACACAGGCAAGAT...CCAATATCTATTCACATTAGCAACGCTAGCATCAACTCTTGACAACATAGAAGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CCA 72 bp | CACTGCTTTATTTTGCCTCATAAACTCATACCTATATaGCCAAATGCCAAGAAGTCTGTGGTAAACATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: HCFILPHKLIPI*PNAKKSVVNIR Trigger: CCTAATGTTTACCACAGACTTCTTGGCATTTGGCCATATAGGTATGAGTTTATGAGGCAAAATAAAGCAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CAA 72 bp | GTCTGGGACCTGATGTCATGGGGGTCTGGAAGACTGTaGCTGCTTTCCAGTGGCTGGGTGCAGCGGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VWDLMSWGSGRL*LLSSGWVQRGC Trigger: ACAGCCCCGCTGCACCCAGCCACTGGAAAGCAGCAACAGTCTTCCAGACCCCCATGACATCAGGTCCCAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CAA 72 bp | TGGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCCTaGTTTACCCTGGGCTCTGTCAGCAAGACATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WAFGIQGLQQSP*FTLGSVSKTWG Trigger: CCCCCATGTCTTGCTGACAGAGCCCAGGGTAAACAAGGGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
||
| 3UTR CAA 72 bp | CAAAGCTGGAGCTTCGTGTGGCTCAGACATGGGCATTaGGGATCCAGGGGCTGCAGCAGTCTCCCTTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: QSWSFVWLRHGH*GSRGCSSLPCL Trigger: TAAACAAGGGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGCTCCAGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| CDS-3UTR CCA 90 bp | CTCATTGAGTGCCTCCCATCAGTGTGTACTTTCTGTGCACAACCTGTCCCTTCACCAGGGCAGGGCACCTaGCCTTCTACTTCGCACATG | + |
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Preference number: 4 (lower is better) Translates to: LIECLPSVCTFCAQPVPSPGQGT*PSTSHM Trigger: CATGTGCGAAGTAGAAGGCCAGGTGCCCTGCCCTGG...TGAAGGGACAGGTTGTGCACAGAAAGTACACACTGATGGGAGGCACTCAATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | GTTGCCCACATGTTGCCCTGTAGCCTTGCCACAGCTTaGGCAGAAACAAGGGTCAGGACCAAAGTGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VAHMLPCSLATA*AETRVRTKVKL Trigger: GAGCTTCACTTTGGTCCTGACCCTTGTTTCTGCCAAAGCTGTGGCAAGGCTACAGGGCAACATGTGGGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | AGACCTGCATCTGCTCCAGGCCACAGAAGTTATCAGTaGCCCACATGTTGCCCTGTAGCCTTGCCACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RPASAPGHRSYQ*PTCCPVALPQL Trigger: AAGCTGTGGCAAGGCTACAGGGCAACATGTGGGCAACTGATAACTTCTGTGGCCTGGAGCAGATGCAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | GCTTCCCACTCGTGTCCCTGGCCTCACCCTTTGTGGTaGTTCAATCTTGCCTGTGTCATTGCCTGTTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: ASHSCPWPHPLW*FNLACVIACCD Trigger: GTCACAACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGGGTGAGGCCAGGGACACGAGTGGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | GCTTCAGCTTCCCACTCGTGTCCCTGGCCTCACCCTTaGTGGTTGTTCAATCTTGCCTGTGTCATTGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: ASASHSCPWPHP*WLFNLACVIAC Trigger: ACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGGGTGAGGCCAGGGACACGAGTGGGAAGCTGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | GAGACTGCTCGTGGCCACAGTGAGCAGGCATCTGGCTaGGATGAAGCCAAGTGCAAAAATTTGCCTGACCCA | + |
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Preference number: 4 (lower is better) Translates to: ETARGHSEQASG*DEAKCKNLPDP Trigger: TGGGTCAGGCAAATTTTTGCACTTGGCTTCATCCAAGCCAGATGCCTGCTCACTGTGGCCACGAGCAGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | ATGGCTTGTCGAATGACCTATGAAGGTCAGCCCCAGTaGCTTCTGGGCTTCAGCTTTCAGGGCTTTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: MACRMTYEGQPQ*LLGFSFQGFPP Trigger: GGGTGGAAAGCCCTGAAAGCTGAAGCCCAGAAGCAACTGGGGCTGACCTTCATAGGTCATTCGACAAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | TGCTCCAGGCCACAGAAGTTATCAGTTGCCCACATGTaGCCCTGTAGCCTTGCCACAGCTTTGGCAGAAACA | + |
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Preference number: 4 (lower is better) Translates to: CSRPQKLSVAHM*PCSLATALAET Trigger: TGTTTCTGCCAAAGCTGTGGCAAGGCTACAGGGCAACATGTGGGCAACTGATAACTTCTGTGGCCTGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| CDS-3UTR TCA 90 bp | GCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCTTCTTATACTGGATCTaGGGGATGTTGAAAAACACA | + |
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Preference number: 4 (lower is better) Translates to: ASCGSDMGIWDPGAAAVSFLYWI*GMLKNT Trigger: TGTGTTTTTCAACATCCCTCAGATCCAGTATAAGAA...GGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| CDS-3UTR GCA 90 bp | AGCTACAAGCATTCCATTGCAGCCCCTACCTGGTCTGCTGCAAAATCACAAACCCTTCTACTTCGCACATaGACTCCCGCAGGCAGTACT | + |
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Preference number: 4 (lower is better) Translates to: SYKHSIAAPTWSAAKSQTLLLRT*TPAGST Trigger: AGTACTGCCTGCGGGAGTGCATGTGCGAAGTAGAAG...GGTTTGTGATTTTGCAGCAGACCAGGTAGGGGCTGCAATGGAATGCTTGTAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | AGAAGTTATCAGTTGCCCACATGTTGCCCTGTAGCCTaGCCACAGCTTTGGCAGAAACAAGGGTCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RSYQLPTCCPVA*PQLWQKQGSGP Trigger: TGGTCCTGACCCTTGTTTCTGCCAAAGCTGTGGCAAGGCTACAGGGCAACATGTGGGCAACTGATAACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | GCCACTCAGACAGGGCCTGGACAGCCTGGCTCCCATTaGGTATTTAGACCACATAGTTGGATAAGAAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: ATQTGPGQPGSH*VFRPHSWIRST Trigger: GGTACTTCTTATCCAACTATGTGGTCTAAATACCAAATGGGAGCCAGGCTGTCCAGGCCCTGTCTGAGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | AACACAATGCCACTGGCACTCCTCCACCACATGGACTaGATGGCAAGGAAGTGGACAAGAGATTTGGTGACT | + |
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Preference number: 4 (lower is better) Translates to: NTMPLALLHHMD*MARKWTRDLVT Trigger: AGTCACCAAATCTCTTGTCCACTTCCTTGCCATCAAGTCCATGTGGTGGAGGAGTGCCAGTGGCATTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| CDS-3UTR CCA 90 bp | TTGTACAAGGTTCTGGACCTCCTCATTGAGTGCCTCCCATCAGTGTGTACTTTCCCGCAGGAAGGGCGATaGCGTCATGTTCTTAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LYKVLDLLIECLPSVCTFPQEGR*RHVLKH Trigger: ATGTTTAAGAACATGACGCCATCGCCCTTCCTGCGG...GAAAGTACACACTGATGGGAGGCACTCAATGAGGAGGTCCAGAACCTTGTACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | GAAGGTCCTGGTAAGACAGATGCCCACCTCTTTCCTTaGCCTATCTCCAATTACGGAGAACCAATCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGPGKTDAHLFP*PISNYGEPISR Trigger: TCTGGAGATTGGTTCTCCGTAATTGGAGATAGGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGACCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| CDS-3UTR TCA 90 bp | ATCTTGCCTGTGTCATTGCCTGTTGTGACAATCACACTATTAAAAGTGGCTTTCTCTTCACAGACTCCTTaGATACCACGTCCCCGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILPVSLPVVTITLLKVAFSSQTP*IPRPRD Trigger: GTCGCGGGGACGTGGTATTCAAGGAGTCTGTGAAGA...GAAAGCCACTTTTAATAGTGTGATTGTCACAACAGGCAATGACACAGGCAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| CDS-3UTR TCA 90 bp | TGGCTTAGGAAGGGGAAACCATCAGACATTTCTAATGCTCAGCAATATGCACTTCCAAAGTTGCCTGGATaGAAGCGCTGCTGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WLRKGKPSDISNAQQYALPKLPG*KRCCFS Trigger: GGAAAAGCAGCAGCGCTTTCATCCAGGCAACTTTGG...AAGTGCATATTGCTGAGCATTAGAAATGTCTGATGGTTTCCCCTTCCTAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | TCTTATCCCTTACACATCAGAGCTACAAGCATTCCATaGCAGCCCCTACCTGGTCTGCTGCAAAATCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SYPLHIRATSIP*QPLPGLLQNHK Trigger: TTTGTGATTTTGCAGCAGACCAGGTAGGGGCTGCAATGGAATGCTTGTAGCTCTGATGTGTAAGGGATAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | CTTTTCACAAACCAGTTTAGCATAACTGGAAGGAGCTaGGTGACTGAGACCCTTGGTCTTCTTCAAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFTNQFSITGRS*VTETLGLLQRL Trigger: GAGCCTTTGAAGAAGACCAAGGGTCTCAGTCACCAAGCTCCTTCCAGTTATGCTAAACTGGTTTGTGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | CTCACCCTTTGTGGTTGTTCAATCTTGCCTGTGTCATaGCCTGTTGTGACAATCACACTATTAAAAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LTLCGCSILPVS*PVVTITLLKVA Trigger: AGCCACTTTTAATAGTGTGATTGTCACAACAGGCAATGACACAGGCAAGATTGAACAACCACAAAGGGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| CDS-3UTR TCA 90 bp | GTCCTGAAGGAGAATCTGCATTGTTGTCTGTATAGAGAGTTGCTGTGCATGGTTTCTTTATGTGCTCCATaGTCTCCTTATTACTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: VLKENLHCCLYRELLCMVSLCAP*SPYYSS Trigger: CGAAGAGTAATAAGGAGATCATGGAGCACATAAAGA...AACCATGCACAGCAACTCTCTATACAGACAACAATGCAGATTCTCCTTCAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| CDS-3UTR CCA 90 bp | ACTTCTATGTTGTCAAGAGTTGATGCTAGCGTTGCTAATGTGAATAGATATTGGAAAACACAAATTTCCTaGCGCCTTCGCCCAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSMLSRVDASVANVNRYWKTQIS*RLRPVP Trigger: GGGAACTGGGCGAAGGCGCCAGGAAATTTGTGTTTT...CCAATATCTATTCACATTAGCAACGCTAGCATCAACTCTTGACAACATAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | AGTGAGTCACTTATGCCCTTGGAATGGTTTTCTAGTTaGTCAGTGTCAGTATTAGATGTGGATGGTGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SESLMPLEWFSS*SVSVLDVDGVL Trigger: CAGAACACCATCCACATCTAATACTGACACTGACAAACTAGAAAACCATTCCAAGGGCATAAGTGACTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | ATGTCCTTTAAACAGATGTGCAAGCTGGCCTTTCCATaGCAGAGTTCCATCATTTATGGTACCAATGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: MSFKQMCKLAFP*QSSIIYGTNVI Trigger: GATTACATTGGTACCATAAATGATGGAACTCTGCAATGGAAAGGCCAGCTTGCACATCTGTTTAAAGGACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | ATTAAAAATAGCCTTTCTTCAGGAAAGTACCATCAGTaGTCATCCCAACAGCCTACTCATTCATGGACGCTA | + |
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Preference number: 4 (lower is better) Translates to: IKNSLSSGKYHQ*SSQQPTHSWTL Trigger: TAGCGTCCATGAATGAGTAGGCTGTTGGGATGACAACTGATGGTACTTTCCTGAAGAAAGGCTATTTTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| 3UTR CAA 72 bp | AGAGTCTTGGGCATTTTTAACAACCACTGCTTTATTTaGCCTCATAAACTCATACCTATATGGCCAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVLGIFNNHCFI*PHKLIPIWPNA Trigger: GGCATTTGGCCATATAGGTATGAGTTTATGAGGCAAAATAAAGCAGTGGTTGTTAAAAATGCCCAAGACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| CDS-3UTR GCA 90 bp | ATCTTGCCTGTGTCATTGCCTGTTGTGACAATCACACTATTAAAAGTGGCTTTCTTAAACATCATGATCTaGACCCAAGGATTCTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: ILPVSLPVVTITLLKVAFLNIMI*TQGFLY Trigger: GTATAAGAATCCTTGGGTGCAGATCATGATGTTTAA...GAAAGCCACTTTTAATAGTGTGATTGTCACAACAGGCAATGACACAGGCAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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| CDS-3UTR CAA 90 bp | AGGAAGACTAAATCTTTTATTGACATCTGTTCAGCAGCTGGCAACCCTGGCCTTAGGGTCTCCTCTTTCTaGCCCAAGATTTTCTTTATG | + |
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Preference number: 5 (lower is better) Translates to: RKTKSFIDICSAAGNPGLRVSSF*PKIFFM Trigger: CATAAAGAAAATCTTGGGCAAGAAAGAGGAGACCCT...AAGGCCAGGGTTGCCAGCTGCTGAACAGATGTCAATAAAAGATTTAGTCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140438.2 |
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