Pregenerated sensors for MRPS24 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020477

Ensembl transcript IDs: ENSMUST00000154330.2

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	AACTGTAACTCCAGCTCCAGGAATATCCAATGCCTTCTACTCATGTaGACACACACACACACACACACATACACACACACACAGACCCAT	+
Preference number: 1 (lower is better) Translates to: NCNSSSRNIQCLLLM*THTHTHTYTHTQTH Trigger: ATGGGTCTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGCACATGAGTAGAAGGCATTGGATATTCCTGGAGCTGGAGTTACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
3UTR-3UTR TCA 90 bp	TTAATTCATTTACAAAAGCTAACTGTAACTCCAGCTCCAGGAATATCCAATGCCAGGCAGGCGGGTCTCTaGGTTCCAGTCCAGCCTGGT	+
Preference number: 2 (lower is better) Translates to: LIHLQKLTVTPAPGISNARQAGL*VPVQPG Trigger: ACCAGGCTGGACTGGAACTCAGAGACCCGCCTGCCT...GGCATTGGATATTCCTGGAGCTGGAGTTACAGTTAGCTTTTGTAAATGAATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
3UTR-3UTR CAA 90 bp	AGGAATATCCAATGCCTTCTACTCATGTGCACACACACACACACACACACATACTCAGAGAACAGGCATTaGGTCTCCTGCACCTCTGTG	+
Preference number: 3 (lower is better) Translates to: RNIQCLLLMCTHTHTHTYSENRH*VSCTSV Trigger: CACAGAGGTGCAGGAGACCAAATGCCTGTTCTCTGA...GTATGTGTGTGTGTGTGTGTGTGTGCACATGAGTAGAAGGCATTGGATATTCCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
CDS-3UTR GCA 90 bp	ATTCAACAGCAGCTTGGAGCTGACGCCTCCACCTCAGAGAACAGGCATTTGGTCCGGAGGTGTGCAGGGTaGGCCAGGCGCCAGGCAGCT	+
Preference number: 4 (lower is better) Translates to: IQQQLGADASTSENRHLVRRCAG*ARRQAA Trigger: AGCTGCCTGGCGCCTGGCGCACCCTGCACACCTCCG...GACCAAATGCCTGTTCTCTGAGGTGGAGGCGTCAGCTCCAAGCTGCTGTTGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
CDS-3UTR GCA 90 bp	TTTATTCAACAGCAGCTTGGAGCTGACGCCTCCACCTCAGAGAACAGGCATTTGCAGGCAGCTCCCGGCTaGAGGCCAGCACCCGCTGCC	+
Preference number: 4 (lower is better) Translates to: FIQQQLGADASTSENRHLQAAPG*RPAPAA Trigger: GGCAGCGGGTGCTGGCCTGCAGCCGGGAGCTGCCTG...CAAATGCCTGTTCTCTGAGGTGGAGGCGTCAGCTCCAAGCTGCTGTTGAATAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
CDS-3UTR CCA 90 bp	CCAGCACCCAGAGGCAGGCGGGTCTCTGAGTTCCAGTCCAGCCTGGTCTACAAACGCTTCAGAACAATCTaGTCAGCCAGGCAGCCGGGA	+
Preference number: 4 (lower is better) Translates to: PAPRGRRVSEFQSSLVYKRFRTI*SARQPG Trigger: TCCCGGCTGCCTGGCTGACCAGATTGTTCTGAAGCG...TTTGTAGACCAGGCTGGACTGGAACTCAGAGACCCGCCTGCCTCTGGGTGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
CDS-3UTR CCA 90 bp	CCAGCACCCAGAGGCAGGCGGGTCTCTGAGTTCCAGTCCAGCCTGGTCTACAAAGTAGAATTTGTGTGCTaGCAGCTGCCTGAGGACCAG	+
Preference number: 4 (lower is better) Translates to: PAPRGRRVSEFQSSLVYKVEFVC*QLPEDQ Trigger: CTGGTCCTCAGGCAGCTGCCAGCACACAAATTCTAC...TTTGTAGACCAGGCTGGACTGGAACTCAGAGACCCGCCTGCCTCTGGGTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
CDS-3UTR GCA 90 bp	CAGCAGCTTGGAGCTGACGCCTCCACCTCAGAGAACAGGCATTTGGTCTCCTGCGAAGTAGAATTTGTGTaGTGGCAGCTGCCTGAGGAC	+
Preference number: 4 (lower is better) Translates to: QQLGADASTSENRHLVSCEVEFV*WQLPED Trigger: GTCCTCAGGCAGCTGCCAGCACACAAATTCTACTTC...GCAGGAGACCAAATGCCTGTTCTCTGAGGTGGAGGCGTCAGCTCCAAGCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
CDS-3UTR GCA 90 bp	ATGTGCACACACACACACACACACACATACACACACACACAGACCCATCCACAGTCCAGGTTACCTGTGTaGAGCGACAGCCAGCCCTTT	+
Preference number: 4 (lower is better) Translates to: MCTHTHTHTYTHTQTHPQSRLPV*SDSQPF Trigger: AAAGGGCTGGCTGTCGCTGCACACAGGTAACCTGGA...CTGTGGATGGGTCTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
CDS-3UTR GCA 90 bp	TTAATTCATTTACAAAAGCTAACTGTAACTCCAGCTCCAGGAATATCCAATGCCCCAGCCCTTTCGGTGTaGGATGTAGTGCGGGGCGTG	+
Preference number: 4 (lower is better) Translates to: LIHLQKLTVTPAPGISNAPALSV*DVVRGV Trigger: CACGCCCCGCACTACATCGCACACCGAAAGGGCTGG...GGCATTGGATATTCCTGGAGCTGGAGTTACAGTTAGCTTTTGTAAATGAATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
CDS GCA 90 bp	TCCATCCAGGTTACCTGTGTGCAGCGACAGCCAGCCCTTTCGGTGTaGGATGTAGTGCGGGGCGTGCGCCTCCTCGTAGCTCACCGGCTT	+
Preference number: 5 (lower is better) Translates to: SIQVTCVQRQPALSV*DVVRGVRLLVAHRL Trigger: AAGCCGGTGAGCTACGAGGAGGCGCACGCCCCGCACTACATCGCACACCGAAAGGGCTGGCTGTCGCTGCACACAGGTAACCTGGATGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
CDS TCA 90 bp	ATAAACTTTCGAAGGAAAACATCCTCCAGGGTTCTCTCTGCAGCATaGTCTTCTCCATCCAGGTTACCTGTGTGCAGCGACAGCCAGCCC	+
Preference number: 5 (lower is better) Translates to: INFRRKTSSRVLSAA*SSPSRLPVCSDSQP Trigger: GGGCTGGCTGTCGCTGCACACAGGTAACCTGGATGGAGAAGATCATGCTGCAGAGAGAACCCTGGAGGATGTTTTCCTTCGAAAGTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
CDS GCA 90 bp	GCCCATCATAAACTTTCGAAGGAAAACATCCTCCAGGGTTCTCTCTaGAGCATGATCTTCTCCATCCAGGTTACCTGTGTGCAGCGACAG	+
Preference number: 5 (lower is better) Translates to: AHHKLSKENILQGSL*SMIFSIQVTCVQRQ Trigger: CTGTCGCTGCACACAGGTAACCTGGATGGAGAAGATCATGCTGCAGAGAGAACCCTGGAGGATGTTTTCCTTCGAAAGTTTATGATGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
CDS GCA 72 bp	TGTGCAGGGTGCGCCAGGCGCCAGGCAGCTCCCGGCTaGAGGCCAGCACCCGCTGCCCTAGCCCGCGCACCG	+
Preference number: 6 (lower is better) Translates to: CAGCARRQAAPG*RPAPAALARAP Trigger: CGGTGCGCGGGCTAGGGCAGCGGGTGCTGGCCTGCAGCCGGGAGCTGCCTGGCGCCTGGCGCACCCTGCACA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154330.2
CDS GCA 72 bp	AAACTTTCGAAGGAAAACATCCTCCAGGGTTCTCTCTaGAGCATGATCTTCTCCATCCAGGTTACCTGTGTG	+
Preference number: 6 (lower is better) Translates to: KLSKENILQGSL*SMIFSIQVTCV Trigger: CACACAGGTAACCTGGATGGAGAAGATCATGCTGCAGAGAGAACCCTGGAGGATGTTTTCCTTCGAAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154330.2