Pregenerated sensors for MRPS22 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032459

Ensembl transcript IDs: ENSMUST00000035034.10

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCTGAGCTACCGGACTCTGCCTCGGAGCTGAGCAGGCGGCGAGGCTaGCCCACCTCGAATGGCTGGGGCCGCGTCGCGAGCAGAGCATCG	+
Preference number: 5 (lower is better) Translates to: SELPDSASELSRRRG*PTSNGWGRVASRAS Trigger: CGATGCTCTGCTCGCGACGCGGCCCCAGCCATTCGAGGTGGGGCAGCCTCGCCGCCTGCTCAGCTCCGAGGCAGAGTCCGGTAGCTCAGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS TCA 90 bp	ACCTTAATTAAGTCGACTCCCTCAGCAGCCTGCTCTTTGGCCTCTTaGGCTGACTGGCCATCTGGATGGAGCATGTGGTACAGCTGGACC	+
Preference number: 5 (lower is better) Translates to: TLIKSTPSAACSLAS*ADWPSGWSMWYSWT Trigger: GGTCCAGCTGTACCACATGCTCCATCCAGATGGCCAGTCAGCTCAAGAGGCCAAAGAGCAGGCTGCTGAGGGAGTCGACTTAATTAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS GCA 72 bp	CCGGACTCTGCCTCGGAGCTGAGCAGGCGGCGAGGCTaGCCCACCTCGAATGGCTGGGGCCGCGTCGCGAGC	+
Preference number: 6 (lower is better) Translates to: PDSASELSRRRG*PTSNGWGRVAS Trigger: GCTCGCGACGCGGCCCCAGCCATTCGAGGTGGGGCAGCCTCGCCGCCTGCTCAGCTCCGAGGCAGAGTCCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS CCA 72 bp	AATGGCTGGGGCCGCGTCGCGAGCAGAGCATCGGGGTaGCGCTGGGCTGTGGCCCGAGTACAGACCCGCCGT	+
Preference number: 6 (lower is better) Translates to: NGWGRVASRASG*RWAVARVQTRR Trigger: ACGGCGGGTCTGTACTCGGGCCACAGCCCAGCGCCACCCCGATGCTCTGCTCGCGACGCGGCCCCAGCCATT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS GCA 72 bp	GTGGCGCTGGGCTGTGGCCCGAGTACAGACCCGCCGTaGTCGCCGAGAGCCCAATTGGAACCTCCACAGCGA	+
Preference number: 6 (lower is better) Translates to: VALGCGPSTDPP*SPRAQLEPPQR Trigger: TCGCTGTGGAGGTTCCAATTGGGCTCTCGGCGAGCACGGCGGGTCTGTACTCGGGCCACAGCCCAGCGCCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS TCA 72 bp	GACTCCCTCAGCAGCCTGCTCTTTGGCCTCTTGAGCTaGCTGGCCATCTGGATGGAGCATGTGGTACAGCTG	+
Preference number: 6 (lower is better) Translates to: DSLSSLLFGLLS*LAIWMEHVVQL Trigger: CAGCTGTACCACATGCTCCATCCAGATGGCCAGTCAGCTCAAGAGGCCAAAGAGCAGGCTGCTGAGGGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS CAA 90 bp	TTGGTGAGGATCCTCTGGACCTCCTCATCCATGAAAGCAGGTTTCTaGACTTCTGAGCTACCGGACTCTGCCTCGGAGCTGAGCAGGCGG	+
Preference number: 6 (lower is better) Translates to: LVRILWTSSSMKAGF*TSELPDSASELSRR Trigger: CCGCCTGCTCAGCTCCGAGGCAGAGTCCGGTAGCTCAGAAGTCAAGAAACCTGCTTTCATGGATGAGGAGGTCCAGAGGATCCTCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS TCA 72 bp	AAGTCGACTCCCTCAGCAGCCTGCTCTTTGGCCTCTTaGGCTGACTGGCCATCTGGATGGAGCATGTGGTAC	+
Preference number: 6 (lower is better) Translates to: KSTPSAACSLAS*ADWPSGWSMWY Trigger: GTACCACATGCTCCATCCAGATGGCCAGTCAGCTCAAGAGGCCAAAGAGCAGGCTGCTGAGGGAGTCGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS CCA 72 bp	GCTGACTGGCCATCTGGATGGAGCATGTGGTACAGCTaGACCAGGCTGGTGGCATCATCAACCAAGTCTCTC	+
Preference number: 6 (lower is better) Translates to: ADWPSGWSMWYS*TRLVASSTKSL Trigger: GAGAGACTTGGTTGATGATGCCACCAGCCTGGTCCAGCTGTACCACATGCTCCATCCAGATGGCCAGTCAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS TCA 72 bp	CAGCGGAATCTGGCTCAAACTGGGCAACACAGAGATTaGGGACATCAGCATGCCGGTCTTGGCTGTACATGG	+
Preference number: 6 (lower is better) Translates to: QRNLAQTGQHRD*GHQHAGLGCTW Trigger: CCATGTACAGCCAAGACCGGCATGCTGATGTCCTCAATCTCTGTGTTGCCCAGTTTGAGCCAGATTCCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS CAA 72 bp	ATCCTCTGGACCTCCTCATCCATGAAAGCAGGTTTCTaGACTTCTGAGCTACCGGACTCTGCCTCGGAGCTG	+
Preference number: 6 (lower is better) Translates to: ILWTSSSMKAGF*TSELPDSASEL Trigger: CAGCTCCGAGGCAGAGTCCGGTAGCTCAGAAGTCAAGAAACCTGCTTTCATGGATGAGGAGGTCCAGAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS CCA 72 bp	CTGGATGGAGCATGTGGTACAGCTGGACCAGGCTGGTaGCATCATCAACCAAGTCTCTCTGGATCTGATCAA	+
Preference number: 6 (lower is better) Translates to: LDGACGTAGPGW*HHQPSLSGSDQ Trigger: TTGATCAGATCCAGAGAGACTTGGTTGATGATGCCACCAGCCTGGTCCAGCTGTACCACATGCTCCATCCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS CCA 72 bp	CATCTGGATGGAGCATGTGGTACAGCTGGACCAGGCTaGTGGCATCATCAACCAAGTCTCTCTGGATCTGAT	+
Preference number: 6 (lower is better) Translates to: HLDGACGTAGPG*WHHQPSLSGSD Trigger: ATCAGATCCAGAGAGACTTGGTTGATGATGCCACCAGCCTGGTCCAGCTGTACCACATGCTCCATCCAGATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS CAA 72 bp	TCAGCGGAATCTGGCTCAAACTGGGCAACACAGAGATaGAGGACATCAGCATGCCGGTCTTGGCTGTACATG	+
Preference number: 6 (lower is better) Translates to: SAESGSNWATQR*RTSACRSWLYM Trigger: CATGTACAGCCAAGACCGGCATGCTGATGTCCTCAATCTCTGTGTTGCCCAGTTTGAGCCAGATTCCGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS CAA 90 bp	TGTATGGCAGGCCTGAAAGTCTTCTGCAAGTCCAGGCCTGTAATCTaGGTGAGGATCCTCTGGACCTCCTCATCCATGAAAGCAGGTTTC	+
Preference number: 6 (lower is better) Translates to: CMAGLKVFCKSRPVI*VRILWTSSSMKAGF Trigger: GAAACCTGCTTTCATGGATGAGGAGGTCCAGAGGATCCTCACCAAGATTACAGGCCTGGACTTGCAGAAGACTTTCAGGCCTGCCATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS GCA 72 bp	TCAAACTGGGCAACACAGAGATTGAGGACATCAGCATaGCGGTCTTGGCTGTACATGGTCTTAAGGTTTTCA	+
Preference number: 6 (lower is better) Translates to: SNWATQRLRTSA*RSWLYMVLRFS Trigger: TGAAAACCTTAAGACCATGTACAGCCAAGACCGGCATGCTGATGTCCTCAATCTCTGTGTTGCCCAGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS CAA 72 bp	ATTTGTATCACTCTGTCCCGTTCTTCCCATGAAGCTTaGCGTAGTGTGCCACTTGGTTCTCTAACAACAATA	+
Preference number: 6 (lower is better) Translates to: ICITLSRSSHEA*RSVPLGSLTTI Trigger: TATTGTTGTTAGAGAACCAAGTGGCACACTACGCAAAGCTTCATGGGAAGAACGGGACAGAGTGATACAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10
CDS CAA 90 bp	TTTCTGTTCCTTCCAAGATCTTATCCTCAGCTAATACGTCATTTATaGGCTTTCGTTCTTCCAGAACTGGTGGCATCTTTAATCGTACTT	+
Preference number: 6 (lower is better) Translates to: FLFLPRSYPQLIRHL*AFVLPELVASLIVL Trigger: AAGTACGATTAAAGATGCCACCAGTTCTGGAAGAACGAAAGCCAATAAATGACGTATTAGCTGAGGATAAGATCTTGGAAGGAACAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035034.10

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