Pregenerated sensors for MRPS21 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054312

Ensembl transcript IDs: ENSMUST00000067298.5, ENSMUST00000072587.5

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	GTCCAAGCCTTCTTGTTCACCTGTGATGGAGTTTTTATTATAGAGAAAAGTAACGATAAAGAAAGGAGTTaGACATGGGTGTGTGGGTGC	+
Preference number: 2 (lower is better) Translates to: VQAFLFTCDGVFIIEKSNDKERS*TWVCGC Trigger: GCACCCACACACCCATGTCCAACTCCTTTCTTTATC...GTTACTTTTCTCTATAATAAAAACTCCATCACAGGTGAACAAGAAGGCTTGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067298.5
CDS-3UTR GCA 90 bp	GTAACAGAACTTGGCTGGATAAAGAAAGGAGTTGGACATGGGTGTGTGGGTGCCGCCCAGCCACGGGTCTaGACGGTTCTTTCGCATCAA	+
Preference number: 4 (lower is better) Translates to: VTELGWIKKGVGHGCVGAAQPRV*TVLSHQ Trigger: TTGATGCGAAAGAACCGTGCAGACCCGTGGCTGGGC...GGCACCCACACACCCATGTCCAACTCCTTTCTTTATCCAGCCAAGTTCTGTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067298.5 ENSMUST00000072587.5
CDS-3UTR GCA 90 bp	AGTAACAGAACTTGGCTGGATAAAGAAAGGAGTTGGACATGGGTGTGTGGGTGCGCCCAGCCACGGGTCTaGACGGTTCTTTCGCATCAA	+
Preference number: 4 (lower is better) Translates to: SNRTWLDKERSWTWVCGCAQPRV*TVLSHQ Trigger: TTGATGCGAAAGAACCGTGCAGACCCGTGGCTGGGC...GCACCCACACACCCATGTCCAACTCCTTTCTTTATCCAGCCAAGTTCTGTTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067298.5 ENSMUST00000072587.5

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