Pregenerated sensors for MRPS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035772Ensembl transcript IDs: ENSMUST00000038600.4
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACAGGGAGTGGGGACACAGACCAGGGTTGGACAAGGACCTTCCTaGTCAGAAGAGGGCTGGCTATCTAGTGTGGGAGAAGGGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: GQGVGTQTRVGQGPS*SEEGWLSSVGEGLS Trigger: AGAAAGCCCTTCTCCCACACTAGATAGCCAGCCCTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCTGGTCTGTGTCCCCACTCCCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR CCA 90 bp | AAAGGTCACCAGGTCATTAACAACATCCACGCCCAGTCCTCTGGGTaGGAAACAGGTATGGATTTCCTTCTTTGGGGAGTCAACCCTATG | + |
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Preference number: 1 (lower is better) Translates to: KGHQVINNIHAQSSG*ETGMDFLLWGVNPM Trigger: CATAGGGTTGACTCCCCAAAGAAGGAAATCCATACCTGTTTCCCACCCAGAGGACTGGGCGTGGATGTTGTTAATGACCTGGTGACCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR TCA 90 bp | TGGGAAACAGGTATGGATTTCCTTCTTTGGGGAGTCAACCCTATGTaGTTAACATTCCTGGTTTCCTTGGTGATCTGTGGGCTCAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: WETGMDFLLWGVNPM*LTFLVSLVICGLKD Trigger: GTCCTTGAGCCCACAGATCACCAAGGAAACCAGGAATGTTAATCACATAGGGTTGACTCCCCAAAGAAGGAAATCCATACCTGTTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR CCA 90 bp | GAATTAGCAAACTCATTAAGTTCTTTAGTAGTGCAGCACAATGCATaGACTATACTTCCTATCTTCCCTCTGGGAGCCTGCTTAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: ELANSLSSLVVQHNA*TILPIFPLGACLAW Trigger: CCAGGCTAAGCAGGCTCCCAGAGGGAAGATAGGAAGTATAGTCCATGCATTGTGCTGCACTACTAAAGAACTTAATGAGTTTGCTAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR-3UTR CCA 90 bp | CACGCCCAGTCCTCTGGGTGGGAAACAGGTATGGATTTCCTTCTTTGGGGAGTCGACACAGACCAGGGTTaGACAAGGACCTTCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: HAQSSGWETGMDFLLWGVDTDQG*TRTFLL Trigger: GAGCAGGAAGGTCCTTGTCCAACCCTGGTCTGTGTC...GACTCCCCAAAGAAGGAAATCCATACCTGTTTCCCACCCAGAGGACTGGGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR-3UTR TCA 90 bp | CACGCCCAGTCCTCTGGGTGGGAAACAGGTATGGATTTCCTTCTTTGGGGAGTCAACTACTGGGGGTCCTaGGGGACATCAGTGTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: HAQSSGWETGMDFLLWGVNYWGS*GTSVLV Trigger: AACCAACACTGATGTCCCTCAGGACCCCCAGTAGTT...GACTCCCCAAAGAAGGAAATCCATACCTGTTTCCCACCCAGAGGACTGGGCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCCAAGACAAACATTTAGGGGGCATTTGGGTGAGGTCTGGCTCTACAAATGCCCAGTCCTCTGGGTaGGAAACAGGTATGGATTTC | + |
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Preference number: 2 (lower is better) Translates to: RVQDKHLGGIWVRSGSTNAQSSG*ETGMDF Trigger: GAAATCCATACCTGTTTCCCACCCAGAGGACTGGGC...ATTTGTAGAGCCAGACCTCACCCAAATGCCCCCTAAATGTTTGTCTTGGACTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR-3UTR TCA 90 bp | ATCCCGGGTATAAGAGGCATAATTACATTGAAACTCAGCTCAAAGTACACCGACATGCCAGAGGCCATGTaGCTAGGTACTTTACCTGAG | + |
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Preference number: 2 (lower is better) Translates to: IPGIRGIITLKLSSKYTDMPEAM*LGTLPE Trigger: CTCAGGTAAAGTACCTAGTCACATGGCCTCTGGCAT...GTCGGTGTACTTTGAGCTGAGTTTCAATGTAATTATGCCTCTTATACCCGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR CAA 90 bp | AGTTTGTTCCCAGAAAAGAGACAGATAAGGGTTAGCTCAAGATCATaGGACTTTGGGGTGGCCATATCTAAGGAAATAGGACTGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SLFPEKRQIRVSSRS*DFGVAISKEIGLWC Trigger: GCACCACAGTCCTATTTCCTTAGATATGGCCACCCCAAAGTCCAATGATCTTGAGCTAACCCTTATCTGTCTCTTTTCTGGGAACAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCCAAGACAAACATTTAGGGGGCATTTGGGTGAGGTCTGGCTCTACAAATACTAGGTACTTTACCTaGGTTTGTTCCCAGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: RVQDKHLGGIWVRSGSTNTRYFT*VCSQKR Trigger: TCTTTTCTGGGAACAAACTCAGGTAAAGTACCTAGT...ATTTGTAGAGCCAGACCTCACCCAAATGCCCCCTAAATGTTTGTCTTGGACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCCAAGACAAACATTTAGGGGGCATTTGGGTGAGGTCTGGCTCTACAAATGAGGGACATCAGTGTTaGTTTTGCTTGGAATTTTCT | + |
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Preference number: 2 (lower is better) Translates to: RVQDKHLGGIWVRSGSTNEGHQC*FCLEFS Trigger: AGAAAATTCCAAGCAAAACCAACACTGATGTCCCTC...ATTTGTAGAGCCAGACCTCACCCAAATGCCCCCTAAATGTTTGTCTTGGACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR-3UTR CCA 90 bp | CACTGTGCGAGCTTCCATATTAAACATAAGAGCTCCAGAGAAGCCCATATCCATAGTGTTGGTTTTGCTTaGAATTTTCTTCAGAGAATG | + |
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Preference number: 2 (lower is better) Translates to: HCASFHIKHKSSREAHIHSVGFA*NFLQRM Trigger: CATTCTCTGAAGAAAATTCCAAGCAAAACCAACACT...ATGGATATGGGCTTCTCTGGAGCTCTTATGTTTAATATGGAAGCTCGCACAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR CCA 72 bp | ATGCTGAGGACAGGGAGTGGGGACACAGACCAGGGTTaGACAAGGACCTTCCTGCTCAGAAGAGGGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: MLRTGSGDTDQG*TRTFLLRRGLA Trigger: AGCCAGCCCTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCTGGTCTGTGTCCCCACTCCCTGTCCTCAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR GCA 72 bp | GTGGGGACACAGACCAGGGTTGGACAAGGACCTTCCTaGTCAGAAGAGGGCTGGCTATCTAGTGTGGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: VGTQTRVGQGPS*SEEGWLSSVGE Trigger: TTCTCCCACACTAGATAGCCAGCCCTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCTGGTCTGTGTCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR CCA 72 bp | ACATCCACGCCCAGTCCTCTGGGTGGGAAACAGGTATaGATTTCCTTCTTTGGGGAGTCAACCCTATGTGAT | + |
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Preference number: 3 (lower is better) Translates to: TSTPSPLGGKQV*ISFFGESTLCD Trigger: ATCACATAGGGTTGACTCCCCAAAGAAGGAAATCCATACCTGTTTCCCACCCAGAGGACTGGGCGTGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR CCA 72 bp | CAGGTCATTAACAACATCCACGCCCAGTCCTCTGGGTaGGAAACAGGTATGGATTTCCTTCTTTGGGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: QVINNIHAQSSG*ETGMDFLLWGV Trigger: GACTCCCCAAAGAAGGAAATCCATACCTGTTTCCCACCCAGAGGACTGGGCGTGGATGTTGTTAATGACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR-3UTR CAA 90 bp | AATGCATGGACTATACTTCCTATCTTCCCTCTGGGAGCCTGCTTAGCCTGGTTAGTTAGCTCAAGATCATaGGACTTTGGGGTGGCCATA | + |
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Preference number: 3 (lower is better) Translates to: NAWTILPIFPLGACLAWLVSSRS*DFGVAI Trigger: TATGGCCACCCCAAAGTCCAATGATCTTGAGCTAAC...TAACCAGGCTAAGCAGGCTCCCAGAGGGAAGATAGGAAGTATAGTCCATGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR CCA 72 bp | GAAGGAAGAGTCCAAGACAAACATTTAGGGGGCATTTaGGTGAGGTCTGGCTCTACAAATAGCAAAGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: EGRVQDKHLGGI*VRSGSTNSKGH Trigger: GTGACCTTTGCTATTTGTAGAGCCAGACCTCACCCAAATGCCCCCTAAATGTTTGTCTTGGACTCTTCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR TCA 72 bp | GGTATGGATTTCCTTCTTTGGGGAGTCAACCCTATGTaGTTAACATTCCTGGTTTCCTTGGTGATCTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: GMDFLLWGVNPM*LTFLVSLVICG Trigger: CCCACAGATCACCAAGGAAACCAGGAATGTTAATCACATAGGGTTGACTCCCCAAAGAAGGAAATCCATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR CCA 72 bp | AACTCATTAAGTTCTTTAGTAGTGCAGCACAATGCATaGACTATACTTCCTATCTTCCCTCTGGGAGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: NSLSSLVVQHNA*TILPIFPLGAC Trigger: GCAGGCTCCCAGAGGGAAGATAGGAAGTATAGTCCATGCATTGTGCTGCACTACTAAAGAACTTAATGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR GCA 72 bp | AGCAAACTCATTAAGTTCTTTAGTAGTGCAGCACAATaGATGGACTATACTTCCTATCTTCCCTCTGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: SKLIKFFSSAAQ*MDYTSYLPSGS Trigger: GCTCCCAGAGGGAAGATAGGAAGTATAGTCCATGCATTGTGCTGCACTACTAAAGAACTTAATGAGTTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR TCA 72 bp | GGATTAATTAGCAGACAATGGAGGATTAATTTTAACTaGAAAGCGGAAACTTGGCTAGCTATGTTCAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: GLISRQWRINFN*KAETWLAMFKS Trigger: AGACTTGAACATAGCTAGCCAAGTTTCCGCTTTTCAGTTAAAATTAATCCTCCATTGTCTGCTAATTAATCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR GCA 90 bp | CACAGACCAGGGTTGGACAAGGACCTTCCTGCTCAGAAGAGGGCTGGCTATCTACCCGGGATCGCCTTCTaGAGGAAACCTGGCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: HRPGLDKDLPAQKRAGYLPGIAF*RKPGQR Trigger: GCGCTGGCCAGGTTTCCTGCAGAAGGCGATCCCGGG...TAGATAGCCAGCCCTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCTGGTCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR GCA 90 bp | CACGCCCAGTCCTCTGGGTGGGAAACAGGTATGGATTTCCTTCTTTGGGGAGTCGGACTCTGCAGCCGATaGAGGGCCTCCATCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: HAQSSGWETGMDFLLWGVGLCSR*RASICL Trigger: GAGGCAGATGGAGGCCCTGCATCGGCTGCAGAGTCC...GACTCCCCAAAGAAGGAAATCCATACCTGTTTCCCACCCAGAGGACTGGGCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR TCA 90 bp | CAGGGAGTGGGGACACAGACCAGGGTTGGACAAGGACCTTCCTGCTCAGAAGAGGGCTCACAAACAGAATaGTGCCCTTGCGGTAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QGVGTQTRVGQGPSCSEEGSQTE*CPCGRP Trigger: TGGCCTACCGCAAGGGCATCATTCTGTTTGTGAGCC...CTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCTGGTCTGTGTCCCCACTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR GCA 90 bp | CAGCACAATGCATGGACTATACTTCCTATCTTCCCTCTGGGAGCCTGCTTAGCCGACCCCTTGGGACTCTaGAGCCGATGCAGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QHNAWTILPIFPLGACLADPLGL*SRCRAS Trigger: GGAGGCCCTGCATCGGCTGCAGAGTCCCAAGGGGTC...GGCTAAGCAGGCTCCCAGAGGGAAGATAGGAAGTATAGTCCATGCATTGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR CCA 90 bp | CAGGGAGTGGGGACACAGACCAGGGTTGGACAAGGACCTTCCTGCTCAGAAGAGAAGAGCTGGATAGCTTaGGGCGAGTCGTCGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QGVGTQTRVGQGPSCSEEKSWIA*GESSLP Trigger: TGGCAACGACGACTCGCCCCAAGCTATCCAGCTCTT...CTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCTGGTCTGTGTCCCCACTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR TCA 90 bp | CAGCACAATGCATGGACTATACTTCCTATCTTCCCTCTGGGAGCCTGCTTAGCCTCAGCAAGCCACCCTTaGAGTAGCGGGTGTGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: QHNAWTILPIFPLGACLASASHP*SSGCGR Trigger: ACGCCCACACCCGCTACTTCAAGGGTGGCTTGCTGA...GGCTAAGCAGGCTCCCAGAGGGAAGATAGGAAGTATAGTCCATGCATTGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR GCA 90 bp | CACTGTGCGAGCTTCCATATTAAACATAAGAGCTCCAGAGAAGCCCATATCCATCCAGCGCCGCACACCTaGACACAGCAGCCGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: HCASFHIKHKSSREAHIHPAPHT*TQQPGQ Trigger: CTGACCCGGCTGCTGTGTGCAGGTGTGCGGCGCTGG...ATGGATATGGGCTTCTCTGGAGCTCTTATGTTTAATATGGAAGCTCGCACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR CCA 90 bp | AGGGTTGGACAAGGACCTTCCTGCTCAGAAGAGGGCTGGCTATCTAGTGTGGGATCTAGGATCCTGCTCTaGAAATCGTCGCCATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RVGQGPSCSEEGWLSSVGSRILL*KSSPSW Trigger: CCAGGATGGCGACGATTTCCAGAGCAGGATCCTAGA...TCCCACACTAGATAGCCAGCCCTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR CCA 90 bp | CACAGACCAGGGTTGGACAAGGACCTTCCTGCTCAGAAGAGGGCTGGCTATCTATGGGGATGTTCATCTTaGCTGCATCCCTCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HRPGLDKDLPAQKRAGYLWGCSS*LHPSQP Trigger: TGGCTGTGAGGGATGCAGCCAAGATGAACATCCCCA...TAGATAGCCAGCCCTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCTGGTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR GCA 90 bp | CACAGACCAGGGTTGGACAAGGACCTTCCTGCTCAGAAGAGGGCTGGCTATCTAGATGTTCATCTTGGCTaGATCCCTCACAGCCACATG | + |
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Preference number: 4 (lower is better) Translates to: HRPGLDKDLPAQKRAGYLDVHLG*IPHSHM Trigger: CATGTGGCTGTGAGGGATGCAGCCAAGATGAACATC...TAGATAGCCAGCCCTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCTGGTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR TCA 90 bp | CACTGTGCGAGCTTCCATATTAAACATAAGAGCTCCAGAGAAGCCCATATCCATGGACCGGGGCTCCCGTaGCCTTCCTACCATTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HCASFHIKHKSSREAHIHGPGLP*PSYHSA Trigger: AGCAGAATGGTAGGAAGGTCACGGGAGCCCCGGTCC...ATGGATATGGGCTTCTCTGGAGCTCTTATGTTTAATATGGAAGCTCGCACAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR CCA 90 bp | CAGCACAATGCATGGACTATACTTCCTATCTTCCCTCTGGGAGCCTGCTTAGCCCCACAATGCCCACTGTaGGGATGTTCATCTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QHNAWTILPIFPLGACLAPQCPL*GCSSWL Trigger: CAGCCAAGATGAACATCCCCACAGTGGGCATTGTGG...GGCTAAGCAGGCTCCCAGAGGGAAGATAGGAAGTATAGTCCATGCATTGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR CCA 90 bp | TTCCCAGAAAAGAGACAGATAAGGGTTAGCTCAAGATCATTGGACTTTGGGGTGTGCCCTCGGACCCCTTaGGACTCTGCAGCCGATGCA | + |
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Preference number: 4 (lower is better) Translates to: FPEKRQIRVSSRSLDFGVCPRTP*DSAADA Trigger: TGCATCGGCTGCAGAGTCCCAAGGGGTCCGAGGGCA...CACCCCAAAGTCCAATGATCTTGAGCTAACCCTTATCTGTCTCTTTTCTGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR GCA 90 bp | TTCCCAGAAAAGAGACAGATAAGGGTTAGCTCAAGATCATTGGACTTTGGGGTGTGCAGGGCCTCCATCTaGCTCCTCTTCTCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FPEKRQIRVSSRSLDFGVCRASI*LLFSLA Trigger: GGCCAAGGAGAAGAGGAGGCAGATGGAGGCCCTGCA...CACCCCAAAGTCCAATGATCTTGAGCTAACCCTTATCTGTCTCTTTTCTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR CCA 90 bp | ATCCCGGGTATAAGAGGCATAATTACATTGAAACTCAGCTCAAAGTACACCGACCTTCTGCAGGAAACCTaGCCAGCGCCGCACACCTGC | + |
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Preference number: 4 (lower is better) Translates to: IPGIRGIITLKLSSKYTDLLQET*PAPHTC Trigger: GCAGGTGTGCGGCGCTGGCCAGGTTTCCTGCAGAAG...GTCGGTGTACTTTGAGCTGAGTTTCAATGTAATTATGCCTCTTATACCCGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR CCA 90 bp | CAGCACAATGCATGGACTATACTTCCTATCTTCCCTCTGGGAGCCTGCTTAGCCTCCCTCACAGCCACATaGGGTTCAAAGACATTGTTG | + |
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Preference number: 4 (lower is better) Translates to: QHNAWTILPIFPLGACLASLTAT*GSKTLL Trigger: CAACAATGTCTTTGAACCCCATGTGGCTGTGAGGGA...GGCTAAGCAGGCTCCCAGAGGGAAGATAGGAAGTATAGTCCATGCATTGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR GCA 90 bp | AGAGTCCAAGACAAACATTTAGGGGGCATTTGGGTGAGGTCTGGCTCTACAAATAGTTGGTGTCCACAATaGCCACTGTGGGGATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RVQDKHLGGIWVRSGSTNSWCPQ*PLWGCS Trigger: TGAACATCCCCACAGTGGGCATTGTGGACACCAACT...ATTTGTAGAGCCAGACCTCACCCAAATGCCCCCTAAATGTTTGTCTTGGACTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR CCA 90 bp | AGAGTCCAAGACAAACATTTAGGGGGCATTTGGGTGAGGTCTGGCTCTACAAATTACTCCCCACAGGCCTaGGCTGTAGTCTCAATTAAG | + |
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Preference number: 4 (lower is better) Translates to: RVQDKHLGGIWVRSGSTNYSPQA*AVVSIK Trigger: CTTAATTGAGACTACAGCCCAGGCCTGTGGGGAGTA...ATTTGTAGAGCCAGACCTCACCCAAATGCCCCCTAAATGTTTGTCTTGGACTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR CCA 90 bp | ATCCCGGGTATAAGAGGCATAATTACATTGAAACTCAGCTCAAAGTACACCGACGGCATGGGTTGCAGTTaGTGTCCACAATGCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: IPGIRGIITLKLSSKYTDGMGCS*CPQCPL Trigger: CAGTGGGCATTGTGGACACCAACTGCAACCCATGCC...GTCGGTGTACTTTGAGCTGAGTTTCAATGTAATTATGCCTCTTATACCCGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR GCA 90 bp | CAGCACAATGCATGGACTATACTTCCTATCTTCCCTCTGGGAGCCTGCTTAGCCACATTGTTGAGTGTGTaGAGAAAGATGATGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QHNAWTILPIFPLGACLATLLSV*RKMMRS Trigger: AGACCTCATCATCTTTCTGCACACACTCAACAATGT...GGCTAAGCAGGCTCCCAGAGGGAAGATAGGAAGTATAGTCCATGCATTGTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR CAA 72 bp | GTCCTCTGGGTGGGAAACAGGTATGGATTTCCTTCTTaGGGGAGTCAACCCTATGTGATTAACATTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VLWVGNRYGFPS*GSQPYVINIPG Trigger: ACCAGGAATGTTAATCACATAGGGTTGACTCCCCAAAGAAGGAAATCCATACCTGTTTCCCACCCAGAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR CAA 72 bp | CCAGAAAAGAGACAGATAAGGGTTAGCTCAAGATCATaGGACTTTGGGGTGGCCATATCTAAGGAAATAGGA | + |
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Preference number: 4 (lower is better) Translates to: PEKRQIRVSSRS*DFGVAISKEIG Trigger: TCCTATTTCCTTAGATATGGCCACCCCAAAGTCCAATGATCTTGAGCTAACCCTTATCTGTCTCTTTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| 3UTR CAA 72 bp | TGTAATACAATCCCGGGTATAAGAGGCATAATTACATaGAAACTCAGCTCAAAGTACACCGACCACAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: CNTIPGIRGIIT*KLSSKYTDHKD Trigger: ATCTTTGTGGTCGGTGTACTTTGAGCTGAGTTTCAATGTAATTATGCCTCTTATACCCGGGATTGTATTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CCA 90 bp | ACCATTCTGCTCCGCAGGGCCCGGGATCGCCTTCTGCAGGAAACCTaGCCAGCGCCGCACACCTGCACACAGCAGCCGGGTCAGCACGGC | + |
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Preference number: 5 (lower is better) Translates to: TILLRRARDRLLQET*PAPHTCTQQPGQHG Trigger: GCCGTGCTGACCCGGCTGCTGTGTGCAGGTGTGCGGCGCTGGCCAGGTTTCCTGCAGAAGGCGATCCCGGGCCCTGCGGAGCAGAATGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS GCA 90 bp | GTGACCTTCCTACCATTCTGCTCCGCAGGGCCCGGGATCGCCTTCTaGAGGAAACCTGGCCAGCGCCGCACACCTGCACACAGCAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: VTFLPFCSAGPGIAF*RKPGQRRTPAHSSR Trigger: CCGGCTGCTGTGTGCAGGTGTGCGGCGCTGGCCAGGTTTCCTGCAGAAGGCGATCCCGGGCCCTGCGGAGCAGAATGGTAGGAAGGTCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS GCA 90 bp | CCCTCGGACCCCTTGGGACTCTGCAGCCGATGCAGGGCCTCCATCTaGCTCCTCTTCTCCTTGGCCCTGTTGATGGTTGTCCGGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSDPLGLCSRCRASI*LLFSLALLMVVRKS Trigger: GCTCTTCCGGACAACCATCAACAGGGCCAAGGAGAAGAGGAGGCAGATGGAGGCCCTGCATCGGCTGCAGAGTCCCAAGGGGTCCGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CCA 90 bp | TCTTGGCCCAGGCGGTTCCCAAAGATGTACGGCTCCATAAACCTATaGCGGCAACCAGCTTTATGTCCCAGGTGTACTCGGGCCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SWPRRFPKMYGSINL*RQPALCPRCTRASK Trigger: CTTCGAGGCCCGAGTACACCTGGGACATAAAGCTGGTTGCCGCCATAGGTTTATGGAGCCGTACATCTTTGGGAACCGCCTGGGCCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS-3UTR CAA 90 bp | AGGGTTGGACAAGGACCTTCCTGCTCAGAAGAGGGCTGGCTATCTAGTGTGGGATGCCTCCTCTTCTCCTaGGCCCTGTTGATGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RVGQGPSCSEEGWLSSVGCLLFS*ALLMVV Trigger: GACAACCATCAACAGGGCCAAGGAGAAGAGGAGGCA...TCCCACACTAGATAGCCAGCCCTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS TCA 90 bp | ACGTGCGCGGTGAAGTTCAAAGCCAGTTGGAGATTCAAGGCTGTCTaGTCCAGATCGATGATATCTTGGCCCAGGCGGTTCCCAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TCAVKFKASWRFKAV*SRSMISWPRRFPKM Trigger: CATCTTTGGGAACCGCCTGGGCCAAGATATCATCGATCTGGATCAGACAGCCTTGAATCTCCAACTGGCTTTGAACTTCACCGCGCACGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS GCA 90 bp | GCATCCCTCACAGCCACATGGGGTTCAAAGACATTGTTGAGTGTGTaGAGAAAGATGATGAGGTCTGGTAGGCGGACTGAAGGCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASLTATWGSKTLLSV*RKMMRSGRRTEGPK Trigger: CTTTGGGCCTTCAGTCCGCCTACCAGACCTCATCATCTTTCTGCACACACTCAACAATGTCTTTGAACCCCATGTGGCTGTGAGGGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS-3UTR CAA 90 bp | AATGCATGGACTATACTTCCTATCTTCCCTCTGGGAGCCTGCTTAGCCTGGTTAGTGGGGATGTTCATCTaGGCTGCATCCCTCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NAWTILPIFPLGACLAWLVGMFI*AASLTA Trigger: GGCTGTGAGGGATGCAGCCAAGATGAACATCCCCAC...TAACCAGGCTAAGCAGGCTCCCAGAGGGAAGATAGGAAGTATAGTCCATGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS CCA 90 bp | CCCACTGTGGGGATGTTCATCTTGGCTGCATCCCTCACAGCCACATaGGGTTCAAAGACATTGTTGAGTGTGTGCAGAAAGATGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTVGMFILAASLTAT*GSKTLLSVCRKMMR Trigger: CCTCATCATCTTTCTGCACACACTCAACAATGTCTTTGAACCCCATGTGGCTGTGAGGGATGCAGCCAAGATGAACATCCCCACAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS-3UTR CAA 90 bp | CACAGACCAGGGTTGGACAAGGACCTTCCTGCTCAGAAGAGGGCTGGCTATCTAAACAGCTCCTTGACATaGAAGAAATCCGAATGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HRPGLDKDLPAQKRAGYLNSSLT*KKSECC Trigger: ACAGCATTCGGATTTCTTCAATGTCAAGGAGCTGTT...TAGATAGCCAGCCCTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCTGGTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS-3UTR CAA 90 bp | GTAGTGCAGCACAATGCATGGACTATACTTCCTATCTTCCCTCTGGGAGCCTGCGAAGTTCAAAGCCAGTaGGAGATTCAAGGCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVQHNAWTILPIFPLGACEVQSQ*EIQGCL Trigger: CAGACAGCCTTGAATCTCCAACTGGCTTTGAACTTC...GCAGGCTCCCAGAGGGAAGATAGGAAGTATAGTCCATGCATTGTGCTGCACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS-3UTR CAA 90 bp | CACAGACCAGGGTTGGACAAGGACCTTCCTGCTCAGAAGAGGGCTGGCTATCTAGGTTCAAAGACATTGTaGAGTGTGTGCAGAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: HRPGLDKDLPAQKRAGYLGSKTL*SVCRKM Trigger: CATCTTTCTGCACACACTCAACAATGTCTTTGAACC...TAGATAGCCAGCCCTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCTGGTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS-3UTR CAA 90 bp | AATGCATGGACTATACTTCCTATCTTCCCTCTGGGAGCCTGCTTAGCCTGGTTAGTTGTCCGGAAGAGCTaGCAGAAGAGCTGGATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NAWTILPIFPLGACLAWLVVRKS*QKSWIA Trigger: AGCTATCCAGCTCTTCTGCAAGCTCTTCCGGACAAC...TAACCAGGCTAAGCAGGCTCCCAGAGGGAAGATAGGAAGTATAGTCCATGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS-3UTR CAA 90 bp | CACAGACCAGGGTTGGACAAGGACCTTCCTGCTCAGAAGAGGGCTGGCTATCTAACAGAAAACAGCTCCTaGACATTGAAGAAATCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: HRPGLDKDLPAQKRAGYLTENSS*TLKKSE Trigger: TTCGGATTTCTTCAATGTCAAGGAGCTGTTTTCTGT...TAGATAGCCAGCCCTCTTCTGAGCAGGAAGGTCCTTGTCCAACCCTGGTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS-3UTR CAA 90 bp | CACTGTGCGAGCTTCCATATTAAACATAAGAGCTCCAGAGAAGCCCATATCCATAGGCCCAAAGAGGAGTaGTGCGTTAGTCAGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HCASFHIKHKSSREAHIHRPKEE*CVSQQA Trigger: GGCTTGCTGACTAACGCACAACTCCTCTTTGGGCCT...ATGGATATGGGCTTCTCTGGAGCTCTTATGTTTAATATGGAAGCTCGCACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS-3UTR CAA 90 bp | ATCCCGGGTATAAGAGGCATAATTACATTGAAACTCAGCTCAAAGTACACCGACAGGCATGGGTTGCAGTaGGTGTCCACAATGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: IPGIRGIITLKLSSKYTDRHGLQ*VSTMPT Trigger: AGTGGGCATTGTGGACACCAACTGCAACCCATGCCT...GTCGGTGTACTTTGAGCTGAGTTTCAATGTAATTATGCCTCTTATACCCGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS-3UTR CAA 90 bp | ATCCCGGGTATAAGAGGCATAATTACATTGAAACTCAGCTCAAAGTACACCGACTTCTCCTTGGCCCTGTaGATGGTTGTCCGGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPGIRGIITLKLSSKYTDFSLAL*MVVRKS Trigger: GCTCTTCCGGACAACCATCAACAGGGCCAAGGAGAA...GTCGGTGTACTTTGAGCTGAGTTTCAATGTAATTATGCCTCTTATACCCGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS GCA 90 bp | AGGCTCTTCACAGAAAACAGCTCCTTGACATTGAAGAAATCCGAATaGTGTAATGGCGTATCTAGGATCCTGCTCTGGAAATCGTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLFTENSSLTLKKSE*CNGVSRILLWKSSP Trigger: TGGCGACGATTTCCAGAGCAGGATCCTAGATACGCCATTACAGCATTCGGATTTCTTCAATGTCAAGGAGCTGTTTTCTGTGAAGAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS-3UTR CAA 90 bp | ATCCCGGGTATAAGAGGCATAATTACATTGAAACTCAGCTCAAAGTACACCGACGTGATGAGGCATGGGTaGCAGTTGGTGTCCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: IPGIRGIITLKLSSKYTDVMRHG*QLVSTM Trigger: CATTGTGGACACCAACTGCAACCCATGCCTCATCAC...GTCGGTGTACTTTGAGCTGAGTTTCAATGTAATTATGCCTCTTATACCCGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS-3UTR CAA 90 bp | ATCCCGGGTATAAGAGGCATAATTACATTGAAACTCAGCTCAAAGTACACCGACTGGGGTTCAAAGACATaGTTGAGTGTGTGCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IPGIRGIITLKLSSKYTDWGSKT*LSVCRK Trigger: CTTTCTGCACACACTCAACAATGTCTTTGAACCCCA...GTCGGTGTACTTTGAGCTGAGTTTCAATGTAATTATGCCTCTTATACCCGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS GCA 72 bp | CGCCTTCTGCAGGAAACCTGGCCAGCGCCGCACACCTaGACACAGCAGCCGGGTCAGCACGGCCGGAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLLQETWPAPHT*TQQPGQHGRSG Trigger: CCCGCTCCGGCCGTGCTGACCCGGCTGCTGTGTGCAGGTGTGCGGCGCTGGCCAGGTTTCCTGCAGAAGGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS CCA 72 bp | CTCCGCAGGGCCCGGGATCGCCTTCTGCAGGAAACCTaGCCAGCGCCGCACACCTGCACACAGCAGCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LRRARDRLLQET*PAPHTCTQQPG Trigger: ACCCGGCTGCTGTGTGCAGGTGTGCGGCGCTGGCCAGGTTTCCTGCAGAAGGCGATCCCGGGCCCTGCGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS GCA 72 bp | GCGGGGACCGGGGCTCCCGTGACCTTCCTACCATTCTaGTCCGCAGGGCCCGGGATCGCCTTCTGCAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: AGTGAPVTFLPF*SAGPGIAFCRK Trigger: TTTCCTGCAGAAGGCGATCCCGGGCCCTGCGGAGCAGAATGGTAGGAAGGTCACGGGAGCCCCGGTCCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS GCA 72 bp | CTACCATTCTGCTCCGCAGGGCCCGGGATCGCCTTCTaGAGGAAACCTGGCCAGCGCCGCACACCTGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: LPFCSAGPGIAF*RKPGQRRTPAH Trigger: GTGTGCAGGTGTGCGGCGCTGGCCAGGTTTCCTGCAGAAGGCGATCCCGGGCCCTGCGGAGCAGAATGGTAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS GCA 72 bp | CCACTGCCCTCGGACCCCTTGGGACTCTGCAGCCGATaGAGGGCCTCCATCTGCCTCCTCTTCTCCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLPSDPLGLCSR*RASICLLFSLA Trigger: GGCCAAGGAGAAGAGGAGGCAGATGGAGGCCCTGCATCGGCTGCAGAGTCCCAAGGGGTCCGAGGGCAGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS GCA 72 bp | CCCTTGGGACTCTGCAGCCGATGCAGGGCCTCCATCTaGCTCCTCTTCTCCTTGGCCCTGTTGATGGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PLGLCSRCRASI*LLFSLALLMVV Trigger: GACAACCATCAACAGGGCCAAGGAGAAGAGGAGGCAGATGGAGGCCCTGCATCGGCTGCAGAGTCCCAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CAA 90 bp | GGACTCTGCAGCCGATGCAGGGCCTCCATCTGCCTCCTCTTCTCCTaGGCCCTGTTGATGGTTGTCCGGAAGAGCTTGCAGAAGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLCSRCRASICLLFS*ALLMVVRKSLQKSW Trigger: CCAGCTCTTCTGCAAGCTCTTCCGGACAACCATCAACAGGGCCAAGGAGAAGAGGAGGCAGATGGAGGCCCTGCATCGGCTGCAGAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CAA 72 bp | AGCCGATGCAGGGCCTCCATCTGCCTCCTCTTCTCCTaGGCCCTGTTGATGGTTGTCCGGAAGAGCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRCRASICLLFS*ALLMVVRKSLQ Trigger: CTGCAAGCTCTTCCGGACAACCATCAACAGGGCCAAGGAGAAGAGGAGGCAGATGGAGGCCCTGCATCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CAA 90 bp | TGCCTCCTCTTCTCCTTGGCCCTGTTGATGGTTGTCCGGAAGAGCTaGCAGAAGAGCTGGATAGCTTGGGGCGAGTCGTCGTTGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: CLLFSLALLMVVRKS*QKSWIAWGESSLPG Trigger: CCCTGGCAACGACGACTCGCCCCAAGCTATCCAGCTCTTCTGCAAGCTCTTCCGGACAACCATCAACAGGGCCAAGGAGAAGAGGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CAA 90 bp | AGCCGATGCAGGGCCTCCATCTGCCTCCTCTTCTCCTTGGCCCTGTaGATGGTTGTCCGGAAGAGCTTGCAGAAGAGCTGGATAGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRCRASICLLFSLAL*MVVRKSLQKSWIAW Trigger: CCAAGCTATCCAGCTCTTCTGCAAGCTCTTCCGGACAACCATCAACAGGGCCAAGGAGAAGAGGAGGCAGATGGAGGCCCTGCATCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CAA 72 bp | AGGGCCTCCATCTGCCTCCTCTTCTCCTTGGCCCTGTaGATGGTTGTCCGGAAGAGCTTGCAGAAGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RASICLLFSLAL*MVVRKSLQKSW Trigger: CCAGCTCTTCTGCAAGCTCTTCCGGACAACCATCAACAGGGCCAAGGAGAAGAGGAGGCAGATGGAGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CCA 72 bp | GGCATGGGTTGCAGTTGGTGTCCACAATGCCCACTGTaGGGATGTTCATCTTGGCTGCATCCCTCACAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GMGCSWCPQCPL*GCSSWLHPSQP Trigger: TGGCTGTGAGGGATGCAGCCAAGATGAACATCCCCACAGTGGGCATTGTGGACACCAACTGCAACCCATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CAA 72 bp | GGTTGTCCGGAAGAGCTTGCAGAAGAGCTGGATAGCTaGGGGCGAGTCGTCGTTGCCAGGGATAGGGTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GCPEELAEELDS*GRVVVARDRVS Trigger: ACTTACCCTATCCCTGGCAACGACGACTCGCCCCAAGCTATCCAGCTCTTCTGCAAGCTCTTCCGGACAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CAA 72 bp | TTCTCCTTGGCCCTGTTGATGGTTGTCCGGAAGAGCTaGCAGAAGAGCTGGATAGCTTGGGGCGAGTCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: FSLALLMVVRKS*QKSWIAWGESS Trigger: CGACGACTCGCCCCAAGCTATCCAGCTCTTCTGCAAGCTCTTCCGGACAACCATCAACAGGGCCAAGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CAA 90 bp | CCTGTTGATGGTTGTCCGGAAGAGCTTGCAGAAGAGCTGGATAGCTaGGGGCGAGTCGTCGTTGCCAGGGATAGGGTAAGTGATGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PVDGCPEELAEELDS*GRVVVARDRVSDEA Trigger: TGCCTCATCACTTACCCTATCCCTGGCAACGACGACTCGCCCCAAGCTATCCAGCTCTTCTGCAAGCTCTTCCGGACAACCATCAACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CAA 90 bp | GATGCCCTTGCGGTAGGCCACGTGCGCGGTGAAGTTCAAAGCCAGTaGGAGATTCAAGGCTGTCTGATCCAGATCGATGATATCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DALAVGHVRGEVQSQ*EIQGCLIQIDDILA Trigger: GGCCAAGATATCATCGATCTGGATCAGACAGCCTTGAATCTCCAACTGGCTTTGAACTTCACCGCGCACGTGGCCTACCGCAAGGGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CCA 72 bp | AGGCGGTTCCCAAAGATGTACGGCTCCATAAACCTATaGCGGCAACCAGCTTTATGTCCCAGGTGTACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RRFPKMYGSINL*RQPALCPRCTR Trigger: CCGAGTACACCTGGGACATAAAGCTGGTTGCCGCCATAGGTTTATGGAGCCGTACATCTTTGGGAACCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CCA 72 bp | TGGTGTCCACAATGCCCACTGTGGGGATGTTCATCTTaGCTGCATCCCTCACAGCCACATGGGGTTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: WCPQCPLWGCSS*LHPSQPHGVQR Trigger: TCTTTGAACCCCATGTGGCTGTGAGGGATGCAGCCAAGATGAACATCCCCACAGTGGGCATTGTGGACACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS CAA 72 bp | GCGGTAGGCCACGTGCGCGGTGAAGTTCAAAGCCAGTaGGAGATTCAAGGCTGTCTGATCCAGATCGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: AVGHVRGEVQSQ*EIQGCLIQIDD Trigger: ATCATCGATCTGGATCAGACAGCCTTGAATCTCCAACTGGCTTTGAACTTCACCGCGCACGTGGCCTACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS CAA 72 bp | TTGGTGTCCACAATGCCCACTGTGGGGATGTTCATCTaGGCTGCATCCCTCACAGCCACATGGGGTTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LVSTMPTVGMFI*AASLTATWGSK Trigger: CTTTGAACCCCATGTGGCTGTGAGGGATGCAGCCAAGATGAACATCCCCACAGTGGGCATTGTGGACACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS GCA 72 bp | GTCCACAATGCCCACTGTGGGGATGTTCATCTTGGCTaGATCCCTCACAGCCACATGGGGTTCAAAGACATT | + |
|
Preference number: 6 (lower is better) Translates to: VHNAHCGDVHLG*IPHSHMGFKDI Trigger: AATGTCTTTGAACCCCATGTGGCTGTGAGGGATGCAGCCAAGATGAACATCCCCACAGTGGGCATTGTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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| CDS TCA 72 bp | CCAGTTGGAGATTCAAGGCTGTCTGATCCAGATCGATaGTATCTTGGCCCAGGCGGTTCCCAAAGATGTACG | + |
|
Preference number: 6 (lower is better) Translates to: PVGDSRLSDPDR*YLGPGGSQRCT Trigger: CGTACATCTTTGGGAACCGCCTGGGCCAAGATATCATCGATCTGGATCAGACAGCCTTGAATCTCCAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS CAA 72 bp | GAGATTCAAGGCTGTCTGATCCAGATCGATGATATCTaGGCCCAGGCGGTTCCCAAAGATGTACGGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: EIQGCLIQIDDI*AQAVPKDVRLH Trigger: ATGGAGCCGTACATCTTTGGGAACCGCCTGGGCCAAGATATCATCGATCTGGATCAGACAGCCTTGAATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS CAA 90 bp | AGCCAGTTGGAGATTCAAGGCTGTCTGATCCAGATCGATGATATCTaGGCCCAGGCGGTTCCCAAAGATGTACGGCTCCATAAACCTATG | + |
|
Preference number: 6 (lower is better) Translates to: SQLEIQGCLIQIDDI*AQAVPKDVRLHKPM Trigger: CATAGGTTTATGGAGCCGTACATCTTTGGGAACCGCCTGGGCCAAGATATCATCGATCTGGATCAGACAGCCTTGAATCTCCAACTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS TCA 72 bp | GTGAAGTTCAAAGCCAGTTGGAGATTCAAGGCTGTCTaGTCCAGATCGATGATATCTTGGCCCAGGCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VKFKASWRFKAV*SRSMISWPRRF Trigger: GAACCGCCTGGGCCAAGATATCATCGATCTGGATCAGACAGCCTTGAATCTCCAACTGGCTTTGAACTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS CCA 72 bp | GGGATGTTCATCTTGGCTGCATCCCTCACAGCCACATaGGGTTCAAAGACATTGTTGAGTGTGTGCAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GMFILAASLTAT*GSKTLLSVCRK Trigger: CTTTCTGCACACACTCAACAATGTCTTTGAACCCCATGTGGCTGTGAGGGATGCAGCCAAGATGAACATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS CAA 90 bp | ACTCGGGCCTCGAAGAGGCTCTTCACAGAAAACAGCTCCTTGACATaGAAGAAATCCGAATGCTGTAATGGCGTATCTAGGATCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TRASKRLFTENSSLT*KKSECCNGVSRILL Trigger: GAGCAGGATCCTAGATACGCCATTACAGCATTCGGATTTCTTCAATGTCAAGGAGCTGTTTTCTGTGAAGAGCCTCTTCGAGGCCCGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS GCA 72 bp | ACAGCCACATGGGGTTCAAAGACATTGTTGAGTGTGTaGAGAAAGATGATGAGGTCTGGTAGGCGGACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TATWGSKTLLSV*RKMMRSGRRTE Trigger: TTCAGTCCGCCTACCAGACCTCATCATCTTTCTGCACACACTCAACAATGTCTTTGAACCCCATGTGGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS CAA 72 bp | CGGGCCTCGAAGAGGCTCTTCACAGAAAACAGCTCCTaGACATTGAAGAAATCCGAATGCTGTAATGGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: RASKRLFTENSS*TLKKSECCNGV Trigger: TACGCCATTACAGCATTCGGATTTCTTCAATGTCAAGGAGCTGTTTTCTGTGAAGAGCCTCTTCGAGGCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS CAA 90 bp | AGGTGTACTCGGGCCTCGAAGAGGCTCTTCACAGAAAACAGCTCCTaGACATTGAAGAAATCCGAATGCTGTAATGGCGTATCTAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: RCTRASKRLFTENSS*TLKKSECCNGVSRI Trigger: GATCCTAGATACGCCATTACAGCATTCGGATTTCTTCAATGTCAAGGAGCTGTTTTCTGTGAAGAGCCTCTTCGAGGCCCGAGTACACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS CAA 72 bp | TCGAAGAGGCTCTTCACAGAAAACAGCTCCTTGACATaGAAGAAATCCGAATGCTGTAATGGCGTATCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SKRLFTENSSLT*KKSECCNGVSR Trigger: CCTAGATACGCCATTACAGCATTCGGATTTCTTCAATGTCAAGGAGCTGTTTTCTGTGAAGAGCCTCTTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
||
| CDS GCA 72 bp | ACAGAAAACAGCTCCTTGACATTGAAGAAATCCGAATaGTGTAATGGCGTATCTAGGATCCTGCTCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: TENSSLTLKKSE*CNGVSRILLWK Trigger: TTTCCAGAGCAGGATCCTAGATACGCCATTACAGCATTCGGATTTCTTCAATGTCAAGGAGCTGTTTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038600.4 |
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