RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRPS15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028861

Ensembl transcript IDs: ENSMUST00000030675.8

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TCCTTGTATTCTTTGATGAACGCAGAGGAGGGTGGTTCATCGTCCTaGTTGGGTTGGACTGGTTTCTGGACGGCGGCGTATGCTCGCGCG +
Preference number: 5 (lower is better)
Translates to: SLYSLMNAEEGGSSS*LGWTGFWTAAYARA
Trigger: CGCGCGAGCATACGCCGCCGTCCAGAAACCAGTCCAACCCAAGCAGGACGATGAACCACCCTCCTCTGCGTTCATCAAAGAATACAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8
CDS CCA 90 bp GTTGGGGATGATGTCCTTGTATTCTTTGATGAACGCAGAGGAGGGTaGTTCATCGTCCTGCTTGGGTTGGACTGGTTTCTGGACGGCGGC +
Preference number: 5 (lower is better)
Translates to: VGDDVLVFFDERRGG*FIVLLGLDWFLDGG
Trigger: GCCGCCGTCCAGAAACCAGTCCAACCCAAGCAGGACGATGAACCACCCTCCTCTGCGTTCATCAAAGAATACAAGGACATCATCCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8
CDS CCA 72 bp TCGGAGGCTGCAGGCCACAGCGCGCAGAGAGCAGACTaGCGCTACTTCCGCCCCTCAGCGCAGGGACTGGGG +
Preference number: 6 (lower is better)
Translates to: SEAAGHSAQRAD*RYFRPSAQGLG
Trigger: CCCCAGTCCCTGCGCTGAGGGGCGGAAGTAGCGCCAGTCTGCTCTCTGCGCGCTGTGGCCTGCAGCCTCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8
CDS CCA 72 bp GGTGGTTCATCGTCCTGCTTGGGTTGGACTGGTTTCTaGACGGCGGCGTATGCTCGCGCGGCGCGCAGTAGA +
Preference number: 6 (lower is better)
Translates to: GGSSSCLGWTGF*TAAYARAARSR
Trigger: TCTACTGCGCGCCGCGCGAGCATACGCCGCCGTCCAGAAACCAGTCCAACCCAAGCAGGACGATGAACCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8
CDS CCA 72 bp AACGCAGAGGAGGGTGGTTCATCGTCCTGCTTGGGTTaGACTGGTTTCTGGACGGCGGCGTATGCTCGCGCG +
Preference number: 6 (lower is better)
Translates to: NAEEGGSSSCLG*TGFWTAAYARA
Trigger: CGCGCGAGCATACGCCGCCGTCCAGAAACCAGTCCAACCCAAGCAGGACGATGAACCACCCTCCTCTGCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8
CDS CAA 72 bp GAACGCAGAGGAGGGTGGTTCATCGTCCTGCTTGGGTaGGACTGGTTTCTGGACGGCGGCGTATGCTCGCGC +
Preference number: 6 (lower is better)
Translates to: ERRGGWFIVLLG*DWFLDGGVCSR
Trigger: GCGCGAGCATACGCCGCCGTCCAGAAACCAGTCCAACCCAAGCAGGACGATGAACCACCCTCCTCTGCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8
CDS CAA 90 bp TTGTATTCTTTGATGAACGCAGAGGAGGGTGGTTCATCGTCCTGCTaGGGTTGGACTGGTTTCTGGACGGCGGCGTATGCTCGCGCGGCG +
Preference number: 6 (lower is better)
Translates to: LYSLMNAEEGGSSSC*GWTGFWTAAYARAA
Trigger: CGCCGCGCGAGCATACGCCGCCGTCCAGAAACCAGTCCAACCCAAGCAGGACGATGAACCACCCTCCTCTGCGTTCATCAAAGAATACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8
CDS CAA 72 bp TTGATGAACGCAGAGGAGGGTGGTTCATCGTCCTGCTaGGGTTGGACTGGTTTCTGGACGGCGGCGTATGCT +
Preference number: 6 (lower is better)
Translates to: LMNAEEGGSSSC*GWTGFWTAAYA
Trigger: AGCATACGCCGCCGTCCAGAAACCAGTCCAACCCAAGCAGGACGATGAACCACCCTCCTCTGCGTTCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8
CDS GCA 72 bp TCTTTGATGAACGCAGAGGAGGGTGGTTCATCGTCCTaGTTGGGTTGGACTGGTTTCTGGACGGCGGCGTAT +
Preference number: 6 (lower is better)
Translates to: SLMNAEEGGSSS*LGWTGFWTAAY
Trigger: ATACGCCGCCGTCCAGAAACCAGTCCAACCCAAGCAGGACGATGAACCACCCTCCTCTGCGTTCATCAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8
CDS CCA 72 bp GATGTCCTTGTATTCTTTGATGAACGCAGAGGAGGGTaGTTCATCGTCCTGCTTGGGTTGGACTGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: DVLVFFDERRGG*FIVLLGLDWFL
Trigger: CAGAAACCAGTCCAACCCAAGCAGGACGATGAACCACCCTCCTCTGCGTTCATCAAAGAATACAAGGACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8
CDS TCA 72 bp TTTCGAAGACATCATAGTTGGTCTGACGGAGGATTTTaGGCAACTTTTTCCTCCGGTCGATGCTCATCAGCA +
Preference number: 6 (lower is better)
Translates to: FRRHHSWSDGGF*ATFSSGRCSSA
Trigger: TGCTGATGAGCATCGACCGGAGGAAAAAGTTGCTCAAAATCCTCCGTCAGACCAACTATGATGTCTTCGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8
CDS CAA 72 bp ACATCATCAACCTTCTCTATGTTGGGGATGATGTCCTaGTATTCTTTGATGAACGCAGAGGAGGGTGGTTCA +
Preference number: 6 (lower is better)
Translates to: TSSTFSMLGMMS*YSLMNAEEGGS
Trigger: TGAACCACCCTCCTCTGCGTTCATCAAAGAATACAAGGACATCATCCCCAACATAGAGAAGGTTGATGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8
CDS CAA 72 bp TCCAAGGTTCTGGAATCCTCAGGGTTTTCCACAATCTaGTTCATCAATTGTTCTTGCTTGATTTTTAACTTC +
Preference number: 6 (lower is better)
Translates to: SKVLESSGFSTI*FINCSCLIFNF
Trigger: GAAGTTAAAAATCAAGCAAGAACAATTGATGAACAAGATTGTGGAAAACCCTGAGGATTCCAGAACCTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030675.8