Pregenerated sensors for MRPS14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058267Ensembl transcript IDs: ENSMUST00000078878.14, ENSMUST00000097193.3, ENSMUST00000135680.8
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATATCGCTCGCTGGACTCCAGAAAGTAGCCCGTGGTCAGCTAAGTaGCGGAAGACAATGCGACTAAGTCTCCAGCGACGCTTAACACCA | + |
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Preference number: 1 (lower is better) Translates to: HIARWTPESSPWSAK*RKTMRLSLQRRLTP Trigger: TGGTGTTAAGCGTCGCTGGAGACTTAGTCGCATTGTCTTCCGCCACTTAGCTGACCACGGGCTACTTTCTGGAGTCCAGCGAGCGATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR CCA 90 bp | TGCCCAGCTGGGCAGGTTCTGAAATGGTTTTACCATATCGCTCGCTaGACTCCAGAAAGTAGCCCGTGGTCAGCTAAGTGGCGGAAGACA | + |
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Preference number: 1 (lower is better) Translates to: CPAGQVLKWFYHIAR*TPESSPWSAKWRKT Trigger: TGTCTTCCGCCACTTAGCTGACCACGGGCTACTTTCTGGAGTCCAGCGAGCGATATGGTAAAACCATTTCAGAACCTGCCCAGCTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR CCA 90 bp | AAGTCTCCTGCCAGGATTGACTGCCCAGCTGGGCAGGTTCTGAAATaGTTTTACCATATCGCTCGCTGGACTCCAGAAAGTAGCCCGTGG | + |
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Preference number: 1 (lower is better) Translates to: KSPARIDCPAGQVLK*FYHIARWTPESSPW Trigger: CCACGGGCTACTTTCTGGAGTCCAGCGAGCGATATGGTAAAACCATTTCAGAACCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR TCA 90 bp | ATCTTAAGTCTCCTGCCAGGATTGACTGCCCAGCTGGGCAGGTTCTaGAATGGTTTTACCATATCGCTCGCTGGACTCCAGAAAGTAGCC | + |
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Preference number: 1 (lower is better) Translates to: ILSLLPGLTAQLGRF*NGFTISLAGLQKVA Trigger: GGCTACTTTCTGGAGTCCAGCGAGCGATATGGTAAAACCATTTCAGAACCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGACTTAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR CCA 90 bp | AAATGGTTTTACCATATCGCTCGCTGGACTCCAGAAAGTAGCCCGTaGTCAGCTAAGTGGCGGAAGACAATGCGACTAAGTCTCCAGCGA | + |
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Preference number: 1 (lower is better) Translates to: KWFYHIARWTPESSP*SAKWRKTMRLSLQR Trigger: TCGCTGGAGACTTAGTCGCATTGTCTTCCGCCACTTAGCTGACCACGGGCTACTTTCTGGAGTCCAGCGAGCGATATGGTAAAACCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR CCA 90 bp | GCGGAAGACAATGCGACTAAGTCTCCAGCGACGCTTAACACCACGTaGGCGAGATGTCATAACACAGCGATTTCTGATTCTAACAGGACA | + |
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Preference number: 1 (lower is better) Translates to: AEDNATKSPATLNTT*ARCHNTAISDSNRT Trigger: TGTCCTGTTAGAATCAGAAATCGCTGTGTTATGACATCTCGCCCACGTGGTGTTAAGCGTCGCTGGAGACTTAGTCGCATTGTCTTCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR CCA 90 bp | TGTCATAACACAGCGATTTCTGATTCTAACAGGACAGCTATCCCGTaGAAGGGCAGCAATTTCATCACCAGCCATTTCCTGAAGGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: CHNTAISDSNRTAIP*KGSNFITSHFLKVL Trigger: AAGGACCTTCAGGAAATGGCTGGTGATGAAATTGCTGCCCTTCCACGGGATAGCTGTCCTGTTAGAATCAGAAATCGCTGTGTTATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR-3UTR TCA 90 bp | TCTCCAGCGACGCTTAACACCACGTGGGCGAGATGTCATAACACAGCGATTTCTGTCTCCTGCCAGGATTaGCTGCCCAGCTGGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: SPATLNTTWARCHNTAISVSCQD*LPSWAG Trigger: ACCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGAC...AGAAATCGCTGTGTTATGACATCTCGCCCACGTGGTGTTAAGCGTCGCTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGTTAATAAGGGCTTTGGCAGAGGATGCAAGCAATGAAAGTTCCAGGAGCCCCAGGGCCTTCCTCTaGCCTCCAGCACCAGGCACC | + |
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Preference number: 2 (lower is better) Translates to: WWLIRALAEDASNESSRSPRAFL*PPAPGT Trigger: GGTGCCTGGTGCTGGAGGCCAGAGGAAGGCCCTGGG...GCTCCTGGAACTTTCATTGCTTGCATCCTCTGCCAAAGCCCTTATTAACCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135680.8 |
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| 3UTR-3UTR GCA 90 bp | AACTCTGTCTATTGTTATCCAAAAAGTGATTGTAACTGCAGACCAGGGAAACTACCTGCCAGGATTGACTaGCCAGCTGGGCAGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: NSVYCYPKSDCNCRPGKLPARID*PAGQVL Trigger: CAGAACCTGCCCAGCTGGGCAGTCAATCCTGGCAGG...TAGTTTCCCTGGTCTGCAGTTACAATCACTTTTTGGATAACAATAGACAGAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135680.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGGTTCTGAAATGGTTTTACCATATCGCTCGCTGGACTCCAGAAAGTAGCCCGAAGCCTCTCATCTaGATATTCATAAGCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: GQVLKWFYHIARWTPESSPKPLI*IFISHF Trigger: AAAATGGCTTATGAATATGCAGATGAGAGGCTTCGG...GCTACTTTCTGGAGTCCAGCGAGCGATATGGTAAAACCATTTCAGAACCTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR CCA 72 bp | CGCTGGACTCCAGAAAGTAGCCCGTGGTCAGCTAAGTaGCGGAAGACAATGCGACTAAGTCTCCAGCGACGC | + |
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Preference number: 3 (lower is better) Translates to: RWTPESSPWSAK*RKTMRLSLQRR Trigger: GCGTCGCTGGAGACTTAGTCGCATTGTCTTCCGCCACTTAGCTGACCACGGGCTACTTTCTGGAGTCCAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR TCA 72 bp | CTCCTGCCAGGATTGACTGCCCAGCTGGGCAGGTTCTaGAATGGTTTTACCATATCGCTCGCTGGACTCCAG | + |
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Preference number: 3 (lower is better) Translates to: LLPGLTAQLGRF*NGFTISLAGLQ Trigger: CTGGAGTCCAGCGAGCGATATGGTAAAACCATTTCAGAACCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR GCA 72 bp | GATTTGAACTCTGGACCTTCGGAAGAGCAAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: DLNSGPSEEQVG*SYPLSHLTSPS Trigger: TGAGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTTGCTCTTCCGAAGGTCCAGAGTTCAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135680.8 |
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| 3UTR CCA 72 bp | TACCATATCGCTCGCTGGACTCCAGAAAGTAGCCCGTaGTCAGCTAAGTGGCGGAAGACAATGCGACTAAGT | + |
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Preference number: 3 (lower is better) Translates to: YHIARWTPESSP*SAKWRKTMRLS Trigger: ACTTAGTCGCATTGTCTTCCGCCACTTAGCTGACCACGGGCTACTTTCTGGAGTCCAGCGAGCGATATGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR CCA 72 bp | GCCAGGATTGACTGCCCAGCTGGGCAGGTTCTGAAATaGTTTTACCATATCGCTCGCTGGACTCCAGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: ARIDCPAGQVLK*FYHIARWTPES Trigger: ACTTTCTGGAGTCCAGCGAGCGATATGGTAAAACCATTTCAGAACCTGCCCAGCTGGGCAGTCAATCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR-3UTR CAA 90 bp | AGCCATTTCCTGAAGGTCCTTTGGCAAAATGGTATTCTTTCTGAGCGAATTGATAGTCTCCTGCCAGGATaGACTGCCCAGCTGGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SHFLKVLWQNGILSERIDSLLPG*TAQLGR Trigger: CCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGACT...ATCAATTCGCTCAGAAAGAATACCATTTTGCCAAAGGACCTTCAGGAAATGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR GCA 72 bp | CTAGGGTTTGATCTTAAGTCTCCTGCCAGGATTGACTaGCCAGCTGGGCAGGTTCTGAAATGGTTTTACCAT | + |
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Preference number: 3 (lower is better) Translates to: LGFDLKSPARID*PAGQVLKWFYH Trigger: ATGGTAAAACCATTTCAGAACCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGACTTAAGATCAAACCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR GCA 72 bp | GATCTTGTTTCGGATGGTTGTGAGTCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: DLVSDGCESPCG*WDLNSGPSEEQ Trigger: TTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCATCCGAAACAAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135680.8 |
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| 3UTR CCA 72 bp | ACAGCGATTTCTGATTCTAACAGGACAGCTATCCCGTaGAAGGGCAGCAATTTCATCACCAGCCATTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: TAISDSNRTAIP*KGSNFITSHFL Trigger: CAGGAAATGGCTGGTGATGAAATTGCTGCCCTTCCACGGGATAGCTGTCCTGTTAGAATCAGAAATCGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR CCA 72 bp | AATGCGACTAAGTCTCCAGCGACGCTTAACACCACGTaGGCGAGATGTCATAACACAGCGATTTCTGATTCT | + |
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Preference number: 3 (lower is better) Translates to: NATKSPATLNTT*ARCHNTAISDS Trigger: AGAATCAGAAATCGCTGTGTTATGACATCTCGCCCACGTGGTGTTAAGCGTCGCTGGAGACTTAGTCGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR-3UTR CAA 90 bp | AAGATAGAATTAGAAAATCCTACAATCCTTAATGAAAACAGATCCCGTGCAACCAGTCTCCTGCCAGGATaGACTGCCCAGCTGGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: KIELENPTILNENRSRATSLLPG*TAQLGR Trigger: CCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGACT...GGTTGCACGGGATCTGTTTTCATTAAGGATTGTAGGATTTTCTAATTCTATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135680.8 |
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| 3UTR TCA 72 bp | GTTGGTTATGAGCTGTCCCTCATGGGTGCTAGGAACTaGACTCTGATCCTTTGGAAGAACAGTACTTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: VGYELSLMGARN*TLILWKNSTCS Trigger: AGAGCAAGTACTGTTCTTCCAAAGGATCAGAGTTCAGTTCCTAGCACCCATGAGGGACAGCTCATAACCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135680.8 |
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| 3UTR-3UTR CAA 90 bp | GGGCAGGTTCTGAAATGGTTTTACCATATCGCTCGCTGGACTCCAGAAAGTAGCTTTCCTGAAGGTCCTTaGGCAAAATGGTATTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: GQVLKWFYHIARWTPESSFPEGP*AKWYSF Trigger: GAAAGAATACCATTTTGCCAAAGGACCTTCAGGAAA...GCTACTTTCTGGAGTCCAGCGAGCGATATGGTAAAACCATTTCAGAACCTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078878.14 |
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| 3UTR GCA 72 bp | AACTCTGTCTATTGTTATCCAAAAAGTGATTGTAACTaGAGACCAGGGAAACTAGTCCAGGAATACAACATA | + |
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Preference number: 3 (lower is better) Translates to: NSVYCYPKSDCN*RPGKLVQEYNI Trigger: TATGTTGTATTCCTGGACTAGTTTCCCTGGTCTGCAGTTACAATCACTTTTTGGATAACAATAGACAGAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135680.8 |
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| CDS-3UTR CCA 90 bp | GGGTTTGATCTTAAGTCTCCTGCCAGGATTGACTGCCCAGCTGGGCAGGTTCTGCCAGAAAGTAGCCCGTaGTCAGCTAAGTGGCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GFDLKSPARIDCPAGQVLPESSP*SAKWRK Trigger: CTTCCGCCACTTAGCTGACCACGGGCTACTTTCTGG...CAGAACCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGACTTAAGATCAAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097193.3 ENSMUST00000135680.8 |
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| CDS-3UTR CCA 90 bp | GACCTAGGGTTTGATCTTAAGTCTCCTGCCAGGATTGACTGCCCAGCTGGGCAGCCGTGGTCAGCTAAGTaGCGGAAGACAATGCGACTA | + |
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Preference number: 4 (lower is better) Translates to: DLGFDLKSPARIDCPAGQPWSAK*RKTMRL Trigger: TAGTCGCATTGTCTTCCGCCACTTAGCTGACCACGG...CTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGACTTAAGATCAAACCCTAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097193.3 ENSMUST00000135680.8 |
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| CDS-3UTR CCA 90 bp | GGGTTTGATCTTAAGTCTCCTGCCAGGATTGACTGCCCAGCTGGGCAGGTTCTGAGGACAGCTATCCCGTaGAAGGGCAGCAATTTCATC | + |
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Preference number: 4 (lower is better) Translates to: GFDLKSPARIDCPAGQVLRTAIP*KGSNFI Trigger: GATGAAATTGCTGCCCTTCCACGGGATAGCTGTCCT...CAGAACCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGACTTAAGATCAAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097193.3 ENSMUST00000135680.8 |
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| CDS-3UTR CCA 90 bp | GGGTTTGATCTTAAGTCTCCTGCCAGGATTGACTGCCCAGCTGGGCAGGTTCTGACGCTTAACACCACGTaGGCGAGATGTCATAACACA | + |
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Preference number: 4 (lower is better) Translates to: GFDLKSPARIDCPAGQVLTLNTT*ARCHNT Trigger: TGTGTTATGACATCTCGCCCACGTGGTGTTAAGCGT...CAGAACCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGACTTAAGATCAAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097193.3 ENSMUST00000135680.8 |
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| CDS-3UTR GCA 90 bp | GGGTTTGATCTTAAGTCTCCTGCCAGGATTGACTGCCCAGCTGGGCAGGTTCTGCCGAAGCCTCTCATCTaGATATTCATAAGCCATTTT | + |
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Preference number: 4 (lower is better) Translates to: GFDLKSPARIDCPAGQVLPKPLI*IFISHF Trigger: AAAATGGCTTATGAATATGCAGATGAGAGGCTTCGG...CAGAACCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGACTTAAGATCAAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097193.3 ENSMUST00000135680.8 |
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| CDS-3UTR CCA 90 bp | CCACTCTTGTACTATGCTTTAAAGTTGAAAGACAATTCAATGACAAATAGCCACACGCTTAACACCACGTaGGCGAGATGTCATAACACA | + |
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Preference number: 4 (lower is better) Translates to: PLLYYALKLKDNSMTNSHTLNTT*ARCHNT Trigger: TGTGTTATGACATCTCGCCCACGTGGTGTTAAGCGT...GTGGCTATTTGTCATTGAATTGTCTTTCAACTTTAAAGCATAGTACAAGAGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097193.3 ENSMUST00000135680.8 |
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| CDS-3UTR GCA 90 bp | AAGATAGAATTAGAAAATCCTACAATCCTTAATGAAAACAGATCCCGTGCAACCCCGAAGCCTCTCATCTaGATATTCATAAGCCATTTT | + |
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Preference number: 4 (lower is better) Translates to: KIELENPTILNENRSRATPKPLI*IFISHF Trigger: AAAATGGCTTATGAATATGCAGATGAGAGGCTTCGG...GGTTGCACGGGATCTGTTTTCATTAAGGATTGTAGGATTTTCTAATTCTATCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135680.8 |
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| CDS-3UTR CAA 90 bp | GGGTTTGATCTTAAGTCTCCTGCCAGGATTGACTGCCCAGCTGGGCAGGTTCTGTTCTTTCTGAGCGAATaGATCCGAAGCCTCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: GFDLKSPARIDCPAGQVLFFLSE*IRSLSS Trigger: AGATGAGAGGCTTCGGATCAATTCGCTCAGAAAGAA...CAGAACCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGACTTAAGATCAAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097193.3 ENSMUST00000135680.8 |
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| CDS-3UTR CAA 90 bp | GGGTTTGATCTTAAGTCTCCTGCCAGGATTGACTGCCCAGCTGGGCAGGTTCTGTTTCCTGAAGGTCCTTaGGCAAAATGGTATTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: GFDLKSPARIDCPAGQVLFPEGP*AKWYSF Trigger: GAAAGAATACCATTTTGCCAAAGGACCTTCAGGAAA...CAGAACCTGCCCAGCTGGGCAGTCAATCCTGGCAGGAGACTTAAGATCAAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097193.3 ENSMUST00000135680.8 |
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| CDS-3UTR CAA 90 bp | TGGTGGTTAATAAGGGCTTTGGCAGAGGATGCAAGCAATGAAAGTTCCAGGAGCTTTCCTGAAGGTCCTTaGGCAAAATGGTATTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: WWLIRALAEDASNESSRSFPEGP*AKWYSF Trigger: GAAAGAATACCATTTTGCCAAAGGACCTTCAGGAAA...GCTCCTGGAACTTTCATTGCTTGCATCCTCTGCCAAAGCCCTTATTAACCACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135680.8 |
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| CDS-3UTR CAA 90 bp | CCACTCTTGTACTATGCTTTAAAGTTGAAAGACAATTCAATGACAAATAGCCACTTCTTTCTGAGCGAATaGATCCGAAGCCTCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: PLLYYALKLKDNSMTNSHFFLSE*IRSLSS Trigger: AGATGAGAGGCTTCGGATCAATTCGCTCAGAAAGAA...GTGGCTATTTGTCATTGAATTGTCTTTCAACTTTAAAGCATAGTACAAGAGTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097193.3 ENSMUST00000135680.8 |
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| CDS GCA 72 bp | ATTCTTTCTGAGCGAATTGATCCGAAGCCTCTCATCTaGATATTCATAAGCCATTTTCCGTCTCTTCAAATC | + |
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Preference number: 6 (lower is better) Translates to: ILSERIDPKPLI*IFISHFPSLQI Trigger: GATTTGAAGAGACGGAAAATGGCTTATGAATATGCAGATGAGAGGCTTCGGATCAATTCGCTCAGAAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097193.3 ENSMUST00000135680.8 |
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