Pregenerated sensors for MRPS10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034729Ensembl transcript IDs: ENSMUST00000060752.13, ENSMUST00000119841.8, ENSMUST00000119945.8, ENSMUST00000120737.8, ENSMUST00000125963.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATAGAGAACAGGTACAGCGGTGCTTCCCTGAAACCCAGCCTGCTCCCACCTGGCAAGGGCAGGCGGCCCTaGCTCCCCACAGGGGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: IENRYSGASLKPSLLPPGKGRRP*LPTGGA Trigger: AGCGCCCCCTGTGGGGAGTCAGGGCCGCCTGCCCTT...GCCAGGTGGGAGCAGGCTGGGTTTCAGGGAAGCACCGCTGTACCTGTTCTCTAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| 3UTR-3UTR TCA 90 bp | AAAATAAAATTAGCACAGGCTAACAAGAAGTCAGCAGCGCTACACAAATGTTTACCTGGCTGCCCAGGGTaGGGCCCCAGCCGAGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: KIKLAQANKKSAALHKCLPGCPG*GPSRAR Trigger: CCTTGCTCGGCTGGGGCCTCACCCTGGGCAGCCAGG...TAAACATTTGTGTAGCGCTGCTGACTTCTTGTTAGCCTGTGCTAATTTTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| 3UTR-3UTR GCA 90 bp | AAAATAAAATTAGCACAGGCTAACAAGAAGTCAGCAGCGCTACACAAATGTTTAGACACAAGCATCCTCTaGTATAGAGAACAGGTACAG | + |
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Preference number: 2 (lower is better) Translates to: KIKLAQANKKSAALHKCLDTSIL*YREQVQ Trigger: CTGTACCTGTTCTCTATAGCAGAGGATGCTTGTGTC...TAAACATTTGTGTAGCGCTGCTGACTTCTTGTTAGCCTGTGCTAATTTTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| 3UTR-3UTR CCA 90 bp | AAAATAAAATTAGCACAGGCTAACAAGAAGTCAGCAGCGCTACACAAATGTTTACTGGTTCTTTTGTTTTaGGTTATGCAGAAGTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: KIKLAQANKKSAALHKCLLVLLF*VMQKFA Trigger: AGCAAACTTCTGCATAACCCAAAACAAAAGAACCAG...TAAACATTTGTGTAGCGCTGCTGACTTCTTGTTAGCCTGTGCTAATTTTATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| 3UTR GCA 72 bp | ACAAGCATCCTCTGCTATAGAGAACAGGTACAGCGGTaGTTCCCTGAAACCCAGCCTGCTCCCACCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: TSILCYREQVQR*FPETQPAPTWL Trigger: CAGCCAGGTGGGAGCAGGCTGGGTTTCAGGGAAGCACCGCTGTACCTGTTCTCTATAGCAGAGGATGCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| 3UTR-3UTR CAA 90 bp | AAAATAAAATTAGCACAGGCTAACAAGAAGTCAGCAGCGCTACACAAATGTTTAGGGTTATGCAGAAGTTaGCTAATGTTTGTTCATATC | + |
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Preference number: 3 (lower is better) Translates to: KIKLAQANKKSAALHKCLGLCRS*LMFVHI Trigger: GATATGAACAAACATTAGCAAACTTCTGCATAACCC...TAAACATTTGTGTAGCGCTGCTGACTTCTTGTTAGCCTGTGCTAATTTTATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR TCA 90 bp | GCTGCCCAGGGTGAGGCCCCAGCCGAGCAAGGGCAGGCGGCCCTGACTCCCCACCCCACATCGGTTCCTTaGTGTGTTCTGGCAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: AAQGEAPAEQGQAALTPHPTSVP*CVLATA Trigger: AGCAGTTGCCAGAACACATCAAGGAACCGATGTGGG...GTGGGGAGTCAGGGCCGCCTGCCCTTGCTCGGCTGGGGCCTCACCCTGGGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR CCA 90 bp | GCTGCCCAGGGTGAGGCCCCAGCCGAGCAAGGGCAGGCGGCCCTGACTCCCCACTCTTTGTCACTTCCATaGCCACCCCTTCAGGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: AAQGEAPAEQGQAALTPHSLSLP*PPLQAS Trigger: ACTTGCCTGAAGGGGTGGCCATGGAAGTGACAAAGA...GTGGGGAGTCAGGGCCGCCTGCCCTTGCTCGGCTGGGGCCTCACCCTGGGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCCAGGGTGAGGCCCCAGCCGAGCAAGGGCAGGCGGCCCTGACTCCCCACGGCAACTGCTGTATCTaGGTCTTTGTCACTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: AAQGEAPAEQGQAALTPHGNCCI*VFVTSM Trigger: CATGGAAGTGACAAAGACGCAGATACAGCAGTTGCC...GTGGGGAGTCAGGGCCGCCTGCCCTTGCTCGGCTGGGGCCTCACCCTGGGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR CCA 90 bp | GCTGCCCAGGGTGAGGCCCCAGCCGAGCAAGGGCAGGCGGCCCTGACTCCCCACAACACAGCCCTGTCATaGGCTTTCACTAAGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: AAQGEAPAEQGQAALTPHNTALS*AFTKMD Trigger: GTCCATCTTAGTGAAAGCCCATGACAGGGCTGTGTT...GTGGGGAGTCAGGGCCGCCTGCCCTTGCTCGGCTGGGGCCTCACCCTGGGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR TCA 90 bp | CAGGCGGCCCTGACTCCCCACAGGGGGCGCTCTCCATGGAACACATGCTCCGGCGTCCACATGCAGGTTTaGCAGTGGCACCCACTTCAT | + |
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Preference number: 4 (lower is better) Translates to: QAALTPHRGRSPWNTCSGVHMQV*QWHPLH Trigger: ATGAAGTGGGTGCCACTGTCAAACCTGCATGTGGAC...GCCGGAGCATGTGTTCCATGGAGAGCGCCCCCTGTGGGGAGTCAGGGCCGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR TCA 90 bp | CAGGCGGCCCTGACTCCCCACAGGGGGCGCTCTCCATGGAACACATGCTCCGGCCCCACATCGGTTCCTTaGTGTGTTCTGGCAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: QAALTPHRGRSPWNTCSGPTSVP*CVLATA Trigger: AGCAGTTGCCAGAACACATCAAGGAACCGATGTGGG...GCCGGAGCATGTGTTCCATGGAGAGCGCCCCCTGTGGGGAGTCAGGGCCGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCCAGGGTGAGGCCCCAGCCGAGCAAGGGCAGGCGGCCCTGACTCCCCACATGTGTTCTGGCAACTaGTGTATCTGCGTCTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: AAQGEAPAEQGQAALTPHMCSGN*CICVFV Trigger: GACAAAGACGCAGATACAGCAGTTGCCAGAACACAT...GTGGGGAGTCAGGGCCGCCTGCCCTTGCTCGGCTGGGGCCTCACCCTGGGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR CCA 90 bp | CAGGCGGCCCTGACTCCCCACAGGGGGCGCTCTCCATGGAACACATGCTCCGGCTCTTTGTCACTTCCATaGCCACCCCTTCAGGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: QAALTPHRGRSPWNTCSGSLSLP*PPLQAS Trigger: ACTTGCCTGAAGGGGTGGCCATGGAAGTGACAAAGA...GCCGGAGCATGTGTTCCATGGAGAGCGCCCCCTGTGGGGAGTCAGGGCCGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR GCA 90 bp | CAGGCGGCCCTGACTCCCCACAGGGGGCGCTCTCCATGGAACACATGCTCCGGCGGCAACTGCTGTATCTaGGTCTTTGTCACTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: QAALTPHRGRSPWNTCSGGNCCI*VFVTSM Trigger: CATGGAAGTGACAAAGACGCAGATACAGCAGTTGCC...GCCGGAGCATGTGTTCCATGGAGAGCGCCCCCTGTGGGGAGTCAGGGCCGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR CCA 90 bp | CAGGCGGCCCTGACTCCCCACAGGGGGCGCTCTCCATGGAACACATGCTCCGGCGGGCTTTCACTAAGATaGACAGGCGTTTGTACAACG | + |
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Preference number: 4 (lower is better) Translates to: QAALTPHRGRSPWNTCSGGLSLR*TGVCTT Trigger: CGTTGTACAAACGCCTGTCCATCTTAGTGAAAGCCC...GCCGGAGCATGTGTTCCATGGAGAGCGCCCCCTGTGGGGAGTCAGGGCCGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR CCA 90 bp | CAGGCGGCCCTGACTCCCCACAGGGGGCGCTCTCCATGGAACACATGCTCCGGCAACACAGCCCTGTCATaGGCTTTCACTAAGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: QAALTPHRGRSPWNTCSGNTALS*AFTKMD Trigger: GTCCATCTTAGTGAAAGCCCATGACAGGGCTGTGTT...GCCGGAGCATGTGTTCCATGGAGAGCGCCCCCTGTGGGGAGTCAGGGCCGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR TCA 90 bp | ATAGAGAACAGGTACAGCGGTGCTTCCCTGAAACCCAGCCTGCTCCCACCTGGCGTCCACATGCAGGTTTaGCAGTGGCACCCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IENRYSGASLKPSLLPPGVHMQV*QWHPLH Trigger: ATGAAGTGGGTGCCACTGTCAAACCTGCATGTGGAC...GCCAGGTGGGAGCAGGCTGGGTTTCAGGGAAGCACCGCTGTACCTGTTCTCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR CCA 90 bp | ATAGAGAACAGGTACAGCGGTGCTTCCCTGAAACCCAGCCTGCTCCCACCTGGCTCTTTGTCACTTCCATaGCCACCCCTTCAGGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: IENRYSGASLKPSLLPPGSLSLP*PPLQAS Trigger: ACTTGCCTGAAGGGGTGGCCATGGAAGTGACAAAGA...GCCAGGTGGGAGCAGGCTGGGTTTCAGGGAAGCACCGCTGTACCTGTTCTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR GCA 90 bp | ATAGAGAACAGGTACAGCGGTGCTTCCCTGAAACCCAGCCTGCTCCCACCTGGCGGCAACTGCTGTATCTaGGTCTTTGTCACTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: IENRYSGASLKPSLLPPGGNCCI*VFVTSM Trigger: CATGGAAGTGACAAAGACGCAGATACAGCAGTTGCC...GCCAGGTGGGAGCAGGCTGGGTTTCAGGGAAGCACCGCTGTACCTGTTCTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR CCA 90 bp | ATAGAGAACAGGTACAGCGGTGCTTCCCTGAAACCCAGCCTGCTCCCACCTGGCGGGCTTTCACTAAGATaGACAGGCGTTTGTACAACG | + |
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Preference number: 4 (lower is better) Translates to: IENRYSGASLKPSLLPPGGLSLR*TGVCTT Trigger: CGTTGTACAAACGCCTGTCCATCTTAGTGAAAGCCC...GCCAGGTGGGAGCAGGCTGGGTTTCAGGGAAGCACCGCTGTACCTGTTCTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR CCA 90 bp | ATAGAGAACAGGTACAGCGGTGCTTCCCTGAAACCCAGCCTGCTCCCACCTGGCGCGCTCTATTTTCCTTaGCGGCTCGTGTACTTTAAT | + |
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Preference number: 4 (lower is better) Translates to: IENRYSGASLKPSLLPPGALYFP*RLVYFN Trigger: ATTAAAGTACACGAGCCGCCAAGGAAAATAGAGCGC...GCCAGGTGGGAGCAGGCTGGGTTTCAGGGAAGCACCGCTGTACCTGTTCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR TCA 90 bp | AAAATAAAATTAGCACAGGCTAACAAGAAGTCAGCAGCGCTACACAAATGTTTACCCACATCGGTTCCTTaGTGTGTTCTGGCAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: KIKLAQANKKSAALHKCLPTSVP*CVLATA Trigger: AGCAGTTGCCAGAACACATCAAGGAACCGATGTGGG...TAAACATTTGTGTAGCGCTGCTGACTTCTTGTTAGCCTGTGCTAATTTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR CCA 90 bp | AAAATAAAATTAGCACAGGCTAACAAGAAGTCAGCAGCGCTACACAAATGTTTATCTTTGTCACTTCCATaGCCACCCCTTCAGGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: KIKLAQANKKSAALHKCLSLSLP*PPLQAS Trigger: ACTTGCCTGAAGGGGTGGCCATGGAAGTGACAAAGA...TAAACATTTGTGTAGCGCTGCTGACTTCTTGTTAGCCTGTGCTAATTTTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR CCA 90 bp | AAAATAAAATTAGCACAGGCTAACAAGAAGTCAGCAGCGCTACACAAATGTTTAGGGCTTTCACTAAGATaGACAGGCGTTTGTACAACG | + |
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Preference number: 4 (lower is better) Translates to: KIKLAQANKKSAALHKCLGLSLR*TGVCTT Trigger: CGTTGTACAAACGCCTGTCCATCTTAGTGAAAGCCC...TAAACATTTGTGTAGCGCTGCTGACTTCTTGTTAGCCTGTGCTAATTTTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR GCA 90 bp | AAAATAAAATTAGCACAGGCTAACAAGAAGTCAGCAGCGCTACACAAATGTTTAATGTGTTCTGGCAACTaGTGTATCTGCGTCTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: KIKLAQANKKSAALHKCLMCSGN*CICVFV Trigger: GACAAAGACGCAGATACAGCAGTTGCCAGAACACAT...TAAACATTTGTGTAGCGCTGCTGACTTCTTGTTAGCCTGTGCTAATTTTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS-3UTR CCA 90 bp | AAAATAAAATTAGCACAGGCTAACAAGAAGTCAGCAGCGCTACACAAATGTTTAGCGCTCTATTTTCCTTaGCGGCTCGTGTACTTTAAT | + |
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Preference number: 4 (lower is better) Translates to: KIKLAQANKKSAALHKCLALYFP*RLVYFN Trigger: ATTAAAGTACACGAGCCGCCAAGGAAAATAGAGCGC...TAAACATTTGTGTAGCGCTGCTGACTTCTTGTTAGCCTGTGCTAATTTTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS CCA 90 bp | ACTCATAGCTGTCTAACACAGCCCTGTCATGGGCTTTCACTAAGATaGACAGGCGTTTGTACAACGTGTCTGGCTCATCGGAAGTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: THSCLTQPCHGLSLR*TGVCTTCLAHRKWL Trigger: TAACCACTTCCGATGAGCCAGACACGTTGTACAAACGCCTGTCCATCTTAGTGAAAGCCCATGACAGGGCTGTGTTAGACAGCTATGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 ENSMUST00000125963.2 |
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| CDS CCA 90 bp | AATTCCATGACATTACTCAAGACTTTTCTGCTCTCATTCTCCATTTaGTGTTCAGTGGAGTCTTCCAGAGCTGCGTGGGTTGTACCATCT | + |
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Preference number: 5 (lower is better) Translates to: NSMTLLKTFLLSFSI*CSVESSRAAWVVPS Trigger: AGATGGTACAACCCACGCAGCTCTGGAAGACTCCACTGAACACCAAATGGAGAATGAGAGCAGAAAAGTCTTGAGTAATGTCATGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125963.2 |
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| CDS TCA 72 bp | GCAGGTTTGACAGTGGCACCCACTTCATACTGGCACTaGGCGCGAGGCCACCAGCTCTGGTTGTCCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AGLTVAPTSYWH*ARGHQLWLSCS Trigger: AGAGCAGGACAACCAGAGCTGGTGGCCTCGCGCTCAGTGCCAGTATGAAGTGGGTGCCACTGTCAAACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119945.8 ENSMUST00000125963.2 |
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| CDS CCA 72 bp | CCACATGCAGGTTTGACAGTGGCACCCACTTCATACTaGCAAGCGCGAGGCCACCAGCTCTGGTTGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PHAGLTVAPTSY*QARGHQLWLSC Trigger: GCAGGACAACCAGAGCTGGTGGCCTCGCGCTTGCCAGTATGAAGTGGGTGCCACTGTCAAACCTGCATGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120737.8 |
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| CDS GCA 72 bp | CTCTTAGAACCATTTATAGAGGAATTCCCCAATTCCTaGTGCAGGCGCCGGCACAGAGCCACACACGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: LLEPFIEEFPNS*CRRRHRATHAA Trigger: CGCAGCGTGTGTGGCTCTGTGCCGGCGCCTGCAGCAGGAATTGGGGAATTCCTCTATAAATGGTTCTAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119945.8 ENSMUST00000120737.8 |
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| CDS CCA 72 bp | AGGCTACAAATGGGCTTCAGTGGCAGAACCCTTGTCTaGTGTAAGCAAGGCCCTGGGTTCAATCTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RLQMGFSGRTLV*CKQGPGFNLCC Trigger: GCAGCAGAGATTGAACCCAGGGCCTTGCTTACACCAGACAAGGGTTCTGCCACTGAAGCCCATTTGTAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125963.2 |
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| CDS CCA 72 bp | CTAGCAGACCACTCGAGTCCCACAGAAGGCTACAAATaGGCTTCAGTGGCAGAACCCTTGTCTGGTGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: LADHSSPTEGYK*ASVAEPLSGVS Trigger: GCTTACACCAGACAAGGGTTCTGCCACTGAAGCCCATTTGTAGCCTTCTGTGGGACTCGAGTGGTCTGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125963.2 |
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| CDS CCA 72 bp | TGTCTAACACAGCCCTGTCATGGGCTTTCACTAAGATaGACAGGCGTTTGTACAACGTGTCTGGCTCATCGG | + |
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Preference number: 6 (lower is better) Translates to: CLTQPCHGLSLR*TGVCTTCLAHR Trigger: CCGATGAGCCAGACACGTTGTACAAACGCCTGTCCATCTTAGTGAAAGCCCATGACAGGGCTGTGTTAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 ENSMUST00000125963.2 |
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| CDS CCA 72 bp | AGACTTTTCTGCTCTCATTCTCCATTTGGTGTTCAGTaGAGTCTTCCAGAGCTGCGTGGGTTGTACCATCTA | + |
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Preference number: 6 (lower is better) Translates to: RLFCSHSPFGVQ*SLPELRGLYHL Trigger: TAGATGGTACAACCCACGCAGCTCTGGAAGACTCCACTGAACACCAAATGGAGAATGAGAGCAGAAAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125963.2 |
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| CDS CAA 72 bp | GACATTACTCAAGACTTTTCTGCTCTCATTCTCCATTaGGTGTTCAGTGGAGTCTTCCAGAGCTGCGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: DITQDFSALILH*VFSGVFQSCVG Trigger: ACCCACGCAGCTCTGGAAGACTCCACTGAACACCAAATGGAGAATGAGAGCAGAAAAGTCTTGAGTAATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125963.2 |
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| CDS CAA 90 bp | CAATTCCATGACATTACTCAAGACTTTTCTGCTCTCATTCTCCATTaGGTGTTCAGTGGAGTCTTCCAGAGCTGCGTGGGTTGTACCATC | + |
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Preference number: 6 (lower is better) Translates to: QFHDITQDFSALILH*VFSGVFQSCVGCTI Trigger: GATGGTACAACCCACGCAGCTCTGGAAGACTCCACTGAACACCAAATGGAGAATGAGAGCAGAAAAGTCTTGAGTAATGTCATGGAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125963.2 |
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| CDS GCA 72 bp | AGTTTCGCTGGATATACTCCAGGTAGACACTGGCTGTaGTTCCAGTCAAATGTTTTAACTCCAAACATCTGT | + |
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Preference number: 6 (lower is better) Translates to: SFAGYTPGRHWL*FQSNVLTPNIC Trigger: ACAGATGTTTGGAGTTAAAACATTTGACTGGAAGCACAGCCAGTGTCTACCTGGAGTATATCCAGCGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060752.13 ENSMUST00000119841.8 ENSMUST00000119945.8 ENSMUST00000120737.8 |
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