Pregenerated sensors for MRPL58 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018858Ensembl transcript IDs: ENSMUST00000103036.5, ENSMUST00000106539.10, ENSMUST00000122946.8, ENSMUST00000153983.8
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGGGGCAGCCCTGGATGATCTGCAGCCTCCCTCCAAAGGAACGCTaGTCGGGCAGGGCGGTTAATCGAGAAAAGTCTCCTGTGTGTGTC | + |
|
Preference number: 1 (lower is better) Translates to: KGQPWMICSLPPKER*SGRAVNREKSPVCV Trigger: GACACACACAGGAGACTTTTCTCGATTAACCGCCCTGCCCGAGCAGCGTTCCTTTGGAGGGAGGCTGCAGATCATCCAGGGCTGCCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR GCA 90 bp | ATGCGTGAGGGCAATCTTCTGGCGCACGGGCTCCTCAATCCAGTCTaGACTGGCCAAGTGAAACCTTACTTCAGCCTTGGAATTCACTTT | + |
|
Preference number: 1 (lower is better) Translates to: MREGNLLAHGLLNPV*TGQVKPYFSLGIHF Trigger: AAAGTGAATTCCAAGGCTGAAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTGAGGAGCCCGTGCGCCAGAAGATTGCCCTCACGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122946.8 |
||
| 3UTR CCA 90 bp | CCTCAATCCAGTCTGCACTGGCCAAGTGAAACCTTACTTCAGCCTTaGAATTCACTTTGTTCACATTCTGCCCACCAGGACCGCTGCTCC | + |
|
Preference number: 1 (lower is better) Translates to: PQSSLHWPSETLLQP*NSLCSHSAHQDRCS Trigger: GGAGCAGCGGTCCTGGTGGGCAGAATGTGAACAAAGTGAATTCCAAGGCTGAAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122946.8 |
||
| 3UTR TCA 90 bp | ATCTTCTGGCGCACGGGCTCCTCAATCCAGTCTGCACTGGCCAAGTaGAACCTTACTTCAGCCTTGGAATTCACTTTGTTCACATTCTGC | + |
|
Preference number: 1 (lower is better) Translates to: IFWRTGSSIQSALAK*NLTSALEFTLFTFC Trigger: GCAGAATGTGAACAAAGTGAATTCCAAGGCTGAAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTGAGGAGCCCGTGCGCCAGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122946.8 |
||
| 3UTR CCA 90 bp | CTTAAGTTATATTTGTGTGTGCACATGGATGCTTCATGGAGCTTGTaGAGGTCAGAAACCACCTCTCCTGAGTCAGTTCTCTCTACCGTG | + |
|
Preference number: 1 (lower is better) Translates to: LKLYLCVHMDASWSL*RSETTSPESVLSTV Trigger: CACGGTAGAGAGAACTGACTCAGGAGAGGTGGTTTCTGACCTCCACAAGCTCCATGAAGCATCCATGTGCACACACAAATATAACTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR GCA 90 bp | AGGACAAGAACTGATGCCCAGGAGTTGTTCTCTGACCTCCAGACATaGATACCTCACCTGATACTAAATAAACTAGAGAGAGTGAAATGG | + |
|
Preference number: 1 (lower is better) Translates to: RTRTDAQELFSDLQT*IPHLILNKLERVKW Trigger: CCATTTCACTCTCTCTAGTTTATTTAGTATCAGGTGAGGTATGCATGTCTGGAGGTCAGAGAACAACTCCTGGGCATCAGTTCTTGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR GCA 90 bp | GGACTTCTGGCCTGGGAATGGAGCTCAATGGATTTTGGGGCTCTATGTGTCTACCAGCCCTGGATGATCTaGAGCCTCCCTCCAAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GLLAWEWSSMDFGALCVYQPWMI*SLPPKE Trigger: TTCCTTTGGAGGGAGGCTGCAGATCATCCAGGGCTG...GTAGACACATAGAGCCCCAAAATCCATTGAGCTCCATTCCCAGGCCAGAAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR GCA 90 bp | CGATGTTTATTGCAGCCAGTGATTCATGAGGTGGATAACGGAAGGGGCAGCCCTAGTGCTCTGCTGAGCTaGACTGGCACTCAGGTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: RCLLQPVIHEVDNGRGSPSALLS*TGTQVY Trigger: ATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACT...AGGGCTGCCCCTTCCGTTATCCACCTCATGAATCACTGGCTGCAATAAACATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTATTGCAGCCAGTGATTCATGAGGTGGATAACGGAAGGGGCAGCCCTGGAAGTGCTCTGCTGAGCTaGACTGGCACTCAGGTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: CLLQPVIHEVDNGRGSPGSALLS*TGTQVY Trigger: ATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACT...TCCAGGGCTGCCCCTTCCGTTATCCACCTCATGAATCACTGGCTGCAATAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAATGGTACTCAATTTTCAGGCTAATGTGGAATCCAAATTCTGGTCTCCGGGACGGAAGGGGCAGCCCTaGATGATCTGCAGCCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LMVLNFQANVESKFWSPGRKGQP*MICSLP Trigger: AGGGAGGCTGCAGATCATCCAGGGCTGCCCCTTCCG...TCCCGGAGACCAGAATTTGGATTCCACATTAGCCTGAAAATTGAGTACCATTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGAGGTGACTGCTAGTTGCTCTCTAACCTCTGTGTGCGTGTGGCACACATACGTGCAAAGCTCTCACTaGAAACAGGCTCCTGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: EEVTASCSLTSVCVWHTYVQSSH*KQAPVL Trigger: AAGCACAGGAGCCTGTTTCCAGTGAGAGCTTTGCAC...GTATGTGTGCCACACGCACACAGAGGTTAGAGAGCAACTAGCAGTCACCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR TCA 90 bp | CACTACGTATGTACTTTGCAAATACACAATACACCGGAGGGCGGGCGTCAAAAGCCAGGAGTTGTTCTCTaGCCTCCAGACATGCATACC | + |
|
Preference number: 2 (lower is better) Translates to: HYVCTLQIHNTPEGGRQKPGVVL*PPDMHT Trigger: GGTATGCATGTCTGGAGGTCAGAGAACAACTCCTGG...CTTTTGACGCCCGCCCTCCGGTGTATTGTGTATTTGCAAAGTACATACGTAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR TCA 90 bp | CACTACGTATGTACTTTGCAAATACACAATACACCGGAGGGCGGGCGTCAAAAGGTTCTGGGAAAGGGCTaGGGCTTGAAAGGAGGTATG | + |
|
Preference number: 2 (lower is better) Translates to: HYVCTLQIHNTPEGGRQKVLGKG*GLKGGM Trigger: CATACCTCCTTTCAAGCCTCAGCCCTTTCCCAGAAC...CTTTTGACGCCCGCCCTCCGGTGTATTGTGTATTTGCAAAGTACATACGTAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTCTCTGACCTCCAGACATGCATACCTCACCTGATACTAAATAAACTAGAGCGGAAGGGGCAGCCCTaGATGATCTGCAGCCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LFSDLQTCIPHLILNKLERKGQP*MICSLP Trigger: AGGGAGGCTGCAGATCATCCAGGGCTGCCCCTTCCG...CTCTAGTTTATTTAGTATCAGGTGAGGTATGCATGTCTGGAGGTCAGAGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTCTCTGACCTCCAGACATGCATACCTCACCTGATACTAAATAAACTAGAGGCCATTAGGCGTCCCTaGCTTCCCTGTTTCCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LFSDLQTCIPHLILNKLEAIRRP*LPCFLL Trigger: CAGGAGGAAACAGGGAAGTCAGGGACGCCTAATGGC...CTCTAGTTTATTTAGTATCAGGTGAGGTATGCATGTCTGGAGGTCAGAGAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTGTTATAAACCCCCACCCAAGTCCAGTGACAGCTCATCAGCTTGGAGGTTTACTGTGTGCTCCTTGTaGACGGACTCACAATCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: NCYKPPPKSSDSSSAWRFTVCSL*TDSQSS Trigger: AGAGGATTGTGAGTCCGTCCACAAGGAGCACACAGT...AAACCTCCAAGCTGATGAGCTGTCACTGGACTTGGGTGGGGGTTTATAACAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCGATCCTTCCAGTAACGATAGAAACATTCAGACACTACGTATGTACTTTGCCGGGACTTCTGGCCTaGGAATGGAGCTCAATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: FPILPVTIETFRHYVCTLPGLLA*EWSSMD Trigger: ATCCATTGAGCTCCATTCCCAGGCCAGAAGTCCCGG...CAAAGTACATACGTAGTGTCTGAATGTTTCTATCGTTACTGGAAGGATCGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR CAA 90 bp | ATCCTTCCAGTAACGATAGAAACATTCAGACACTACGTATGTACTTaGCAAATACACAATACACCGGAGGGCGGGCGTCAAAAGAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ILPVTIETFRHYVCT*QIHNTPEGGRQKSR Trigger: CCTGCTCTTTTGACGCCCGCCCTCCGGTGTATTGTGTATTTGCAAAGTACATACGTAGTGTCTGAATGTTTCTATCGTTACTGGAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR TCA 90 bp | TTACATTTTAGGCCTGGATTCTCTTGCATGGCAGAACCCTGGAGCAGAATAAAAAGAAACCACCTCTCCTaGGTCAGTTCTCTCTACCGT | + |
|
Preference number: 2 (lower is better) Translates to: LHFRPGFSCMAEPWSRIKRNHLS*VSSLYR Trigger: ACGGTAGAGAGAACTGACTCAGGAGAGGTGGTTTCT...TTTTATTCTGCTCCAGGGTTCTGCCATGCAAGAGAATCCAGGCCTAAAATGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACATTTTAGGCCTGGATTCTCTTGCATGGCAGAACCCTGGAGCAGAATAAAAACTGTGTGCTCCTTGTaGACGGACTCACAATCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LHFRPGFSCMAEPWSRIKTVCSL*TDSQSS Trigger: AGAGGATTGTGAGTCCGTCCACAAGGAGCACACAGT...TTTTATTCTGCTCCAGGGTTCTGCCATGCAAGAGAATCCAGGCCTAAAATGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR TCA 90 bp | CACTACGTATGTACTTTGCAAATACACAATACACCGGAGGGCGGGCGTCAAAAGATGCAACTATGTAACTaGGCACAGGAAGCATTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: HYVCTLQIHNTPEGGRQKMQLCN*AQEAFV Trigger: AACAAATGCTTCCTGTGCTCAGTTACATAGTTGCAT...CTTTTGACGCCCGCCCTCCGGTGTATTGTGTATTTGCAAAGTACATACGTAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAATGGTACTCAATTTTCAGGCTAATGTGGAATCCAAATTCTGGTCTCCGGGACACATGGATGCTTCATaGAGCTTGTGGAGGTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LMVLNFQANVESKFWSPGHMDAS*SLWRSE Trigger: TTCTGACCTCCACAAGCTCCATGAAGCATCCATGTG...TCCCGGAGACCAGAATTTGGATTCCACATTAGCCTGAAAATTGAGTACCATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR GCA 90 bp | CTAATGGTACTCAATTTTCAGGCTAATGTGGAATCCAAATTCTGGTCTCCGGGATCTGACCTCCAGACATaGATACCTCACCTGATACTA | + |
|
Preference number: 2 (lower is better) Translates to: LMVLNFQANVESKFWSPGSDLQT*IPHLIL Trigger: TAGTATCAGGTGAGGTATGCATGTCTGGAGGTCAGA...TCCCGGAGACCAGAATTTGGATTCCACATTAGCCTGAAAATTGAGTACCATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACATTTTAGGCCTGGATTCTCTTGCATGGCAGAACCCTGGAGCAGAATAAAAGAGCTCAATGGATTTTaGGGCTCTATGTGTCTACCT | + |
|
Preference number: 2 (lower is better) Translates to: LHFRPGFSCMAEPWSRIKELNGF*GSMCLP Trigger: AGGTAGACACATAGAGCCCCAAAATCCATTGAGCTC...TTTTATTCTGCTCCAGGGTTCTGCCATGCAAGAGAATCCAGGCCTAAAATGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CCA 90 bp | CACTACGTATGTACTTTGCAAATACACAATACACCGGAGGGCGGGCGTCAAAAGATTTTCAGGCTAATGTaGAATCCAAATTCTGGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HYVCTLQIHNTPEGGRQKIFRLM*NPNSGL Trigger: GAGACCAGAATTTGGATTCCACATTAGCCTGAAAAT...CTTTTGACGCCCGCCCTCCGGTGTATTGTGTATTTGCAAAGTACATACGTAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCCGATCCTTCCAGTAACGATAGAAACATTCAGACACTACGTATGTACTTTGTTCAGTTTGTCTTTCTaGAGGTCCAGCTCAAATGTC | + |
|
Preference number: 2 (lower is better) Translates to: FPILPVTIETFRHYVCTLFSLSF*RSSSNV Trigger: GACATTTGAGCTGGACCTTCAGAAAGACAAACTGAA...CAAAGTACATACGTAGTGTCTGAATGTTTCTATCGTTACTGGAAGGATCGGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCTAAAGCTGAAGTTTGAAAGCATTTGGAGCAATGTGGAGATTGGACAATTGTTCAGTTTGTCTTTCTaGAGGTCCAGCTCAAATGTC | + |
|
Preference number: 2 (lower is better) Translates to: ELKLKFESIWSNVEIGQLFSLSF*RSSSNV Trigger: GACATTTGAGCTGGACCTTCAGAAAGACAAACTGAA...CAATTGTCCAATCTCCACATTGCTCCAAATGCTTTCAAACTTCAGCTTTAGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCGATCCTTCCAGTAACGATAGAAACATTCAGACACTACGTATGTACTTTGGCGAGGTTCTTTCTCTaGCCTTCATTTTTGGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: FPILPVTIETFRHYVCTLARFFL*PSFLVL Trigger: TAAAACCAAAAATGAAGGCCAGAGAAAGAACCTCGC...CAAAGTACATACGTAGTGTCTGAATGTTTCTATCGTTACTGGAAGGATCGGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR TCA 72 bp | ATTCATGAGGTGGATAACGGAAGGGGCAGCCCTGGATaGTCTGCAGCCTCCCTCCAAAGGAACGCTGCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: IHEVDNGRGSPG*SAASLQRNAAR Trigger: CCGAGCAGCGTTCCTTTGGAGGGAGGCTGCAGATCATCCAGGGCTGCCCCTTCCGTTATCCACCTCATGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR GCA 72 bp | GAAAAGTCTCCTGTGTGTGTCAGTGCTCTGCTGAGCTaGACTGGCACTCAGGTCTATGCCAGCAGGGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: EKSPVCVSALLS*TGTQVYASREG Trigger: GCCCTCCCTGCTGGCATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGGAGACTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR TCA 72 bp | ATCGAGAAAAGTCTCCTGTGTGTGTCAGTGCTCTGCTaGGCTGCACTGGCACTCAGGTCTATGCCAGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IEKSLLCVSVLC*AALALRSMPAG Trigger: CCCTGCTGGCATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGGAGACTTTTCTCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR GCA 72 bp | GGCAATCTTCTGGCGCACGGGCTCCTCAATCCAGTCTaGACTGGCCAAGTGAAACCTTACTTCAGCCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GNLLAHGLLNPV*TGQVKPYFSLG Trigger: TCCAAGGCTGAAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTGAGGAGCCCGTGCGCCAGAAGATTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122946.8 |
||
| 3UTR CCA 72 bp | TCACCCATCTCGGCCCTCCTAACTGTGTGCTCCTTGTaGACGGACTCACAATCCTCTGTTGCTGTATGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SPISALLTVCSL*TDSQSSVAVCA Trigger: AGCACATACAGCAACAGAGGATTGTGAGTCCGTCCACAAGGAGCACACAGTTAGGAGGGCCGAGATGGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR CCA 72 bp | GGGACTTCTGGCCTGGGAATGGAGCTCAATGGATTTTaGGGCTCTATGTGTCTACCTGCCCGGTACACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GTSGLGMELNGF*GSMCLPARYTS Trigger: AGAAGTGTACCGGGCAGGTAGACACATAGAGCCCCAAAATCCATTGAGCTCCATTCCCAGGCCAGAAGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAATCTTCTGGCGCACGGGCTCCTCAATCCAGTCTGCACTGGCCAAGTGAAAGCCTTGGAATTCACTTaGTTCACATTCTGCCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: GNLLAHGLLNPVCTGQVKALEFT*FTFCPP Trigger: TGGTGGGCAGAATGTGAACAAAGTGAATTCCAAGGC...TTTCACTTGGCCAGTGCAGACTGGATTGAGGAGCCCGTGCGCCAGAAGATTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122946.8 |
||
| 3UTR TCA 72 bp | TACGGCTCAGCAGTTATAGGTGCTTGTGGCCAAGCCTaGTTGGTCCTTGGGACCTACATGATGGAGGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: YGSAVIGACGQA*LVLGTYMMEDK Trigger: CTTGTCCTCCATCATGTAGGTCCCAAGGACCAATCAGGCTTGGCCACAAGCACCTATAACTGCTGAGCCGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR GCA 72 bp | AGTTCTATCCGCAGGGAGGAAGAGGTGACTGCTAGTTaGTCTCTAACCTCTGTGTGCGTGTGGCACACATAC | + |
|
Preference number: 3 (lower is better) Translates to: SSIRREEEVTAS*SLTSVCVWHTY Trigger: GTATGTGTGCCACACGCACACAGAGGTTAGAGAGCAACTAGCAGTCACCTCTTCCTCCCTGCGGATAGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR CCA 72 bp | TTCTCTCTACCGTGTAGGTACCAGGGATCTAACTCGTaGCAGTGTGGACAGCGAGGTTCTTTCTCTGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FSLPCRYQGSNS*QCGQRGSFSGL Trigger: AAGGCCAGAGAAAGAACCTCGCTGTCCACACTGCCACGAGTTAGATCCCTGGTACCTACACGGTAGAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR CCA 72 bp | TCTTCTGGCGCACGGGCTCCTCAATCCAGTCTGCACTaGCCAAGTGAAACCTTACTTCAGCCTTGGAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSGARAPQSSLH*PSETLLQPWNS Trigger: TGAATTCCAAGGCTGAAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTGAGGAGCCCGTGCGCCAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122946.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAAGAGGTGACTGCTAGTTGCTCTCTAACCTCTGTGTGCGTGTGGCACACAGGAGCTCAATGGATTTaGGGGCTCTATGTGTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: EEEVTASCSLTSVCVWHTGAQWI*GLYVST Trigger: GGTAGACACATAGAGCCCCAAAATCCATTGAGCTCC...TGTGTGCCACACGCACACAGAGGTTAGAGAGCAACTAGCAGTCACCTCTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR TCA 72 bp | CGCACGGGCTCCTCAATCCAGTCTGCACTGGCCAAGTaGAACCTTACTTCAGCCTTGGAATTCACTTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RTGSSIQSALAK*NLTSALEFTLF Trigger: GAACAAAGTGAATTCCAAGGCTGAAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTGAGGAGCCCGTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122946.8 |
||
| 3UTR GCA 72 bp | TATAAGGTGGGCTTAGACCCAAAGGTAAGAGCCCTGTaGAAAGCTCTCACTGGAAACAGGCTCCTGTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: YKVGLDPKVRAL*KALTGNRLLCF Trigger: GAAGCACAGGAGCCTGTTTCCAGTGAGAGCTTTGCACAGGGCTCTTACCTTTGGGTCTAAGCCCACCTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR CCA 72 bp | TTGTTGATCTTATTTTTATGCGTGAGGGCAATCTTCTaGCGCACGGGCTCCTCAATCCAGTCTGCACTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLILFLCVRAIF*RTGSSIQSALA Trigger: GGCCAGTGCAGACTGGATTGAGGAGCCCGTGCGCCAGAAGATTGCCCTCACGCATAAAAATAAGATCAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122946.8 |
||
| 3UTR CCA 72 bp | AGACCCAAAGGTAAGAGCCCTGTGCAAAGCTCTCACTaGAAACAGGCTCCTGTGCTTCGATGTTTATTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RPKGKSPVQSSH*KQAPVLRCLLQ Trigger: CTGCAATAAACATCGAAGCACAGGAGCCTGTTTCCAGTGAGAGCTTTGCACAGGGCTCTTACCTTTGGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGGTGACTGCTAGTTGCTCTCTAACCTCTGTGTGCGTGTGGCACACATACGTGCTTCGATGTTTATaGCAGCCAGTGATTCATGAG | + |
|
Preference number: 3 (lower is better) Translates to: EEVTASCSLTSVCVWHTYVLRCL*QPVIHE Trigger: CTCATGAATCACTGGCTGCAATAAACATCGAAGCAC...GTATGTGTGCCACACGCACACAGAGGTTAGAGAGCAACTAGCAGTCACCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR GCA 72 bp | GAAGAGGTGACTGCTAGTTGCTCTCTAACCTCTGTGTaGGTGTGGCACACATACATCCACCCACTATATATG | + |
|
Preference number: 3 (lower is better) Translates to: EEVTASCSLTSV*VWHTYIHPLYM Trigger: CATATATAGTGGGTGGATGTATGTGTGCCACACGCACACAGAGGTTAGAGAGCAACTAGCAGTCACCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR CCA 72 bp | TATTTGTGTGTGCACATGGATGCTTCATGGAGCTTGTaGAGGTCAGAAACCACCTCTCCTGAGTCAGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: YLCVHMDASWSL*RSETTSPESVL Trigger: GAGAACTGACTCAGGAGAGGTGGTTTCTGACCTCCACAAGCTCCATGAAGCATCCATGTGCACACACAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR CCA 72 bp | AGTCTGCACTGGCCAAGTGAAACCTTACTTCAGCCTTaGAATTCACTTTGTTCACATTCTGCCCACCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SLHWPSETLLQP*NSLCSHSAHQD Trigger: GTCCTGGTGGGCAGAATGTGAACAAAGTGAATTCCAAGGCTGAAGTAAGGTTTCACTTGGCCAGTGCAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122946.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACATTTTAGGCCTGGATTCTCTTGCATGGCAGAACCCTGGAGCAGAATAAAAGGAGCTCAATGGATTTaGGGGCTCTATGTGTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: LHFRPGFSCMAEPWSRIKGAQWI*GLYVST Trigger: GGTAGACACATAGAGCCCCAAAATCCATTGAGCTCC...TTTTATTCTGCTCCAGGGTTCTGCCATGCAAGAGAATCCAGGCCTAAAATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR TCA 72 bp | GCAGTGGGGACCATGCTTGGAGCTAAAGCTGAAGTTTaGAAGCATTTGGAGCAATGTGGAGATTGGACAATT | + |
|
Preference number: 3 (lower is better) Translates to: AVGTMLGAKAEV*KHLEQCGDWTI Trigger: AATTGTCCAATCTCCACATTGCTCCAAATGCTTTCAAACTTCAGCTTTAGCTCCAAGCATGGTCCCCACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR CCA 72 bp | CTTAAGTTATATTTGTGTGTGCACATGGATGCTTCATaGAGCTTGTGGAGGTCAGAAACCACCTCTCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKLYLCVHMDAS*SLWRSETTSPE Trigger: CTCAGGAGAGGTGGTTTCTGACCTCCACAAGCTCCATGAAGCATCCATGTGCACACACAAATATAACTTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR GCA 72 bp | ACTGATGCCCAGGAGTTGTTCTCTGACCTCCAGACATaGATACCTCACCTGATACTAAATAAACTAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TDAQELFSDLQT*IPHLILNKLER Trigger: TCTCTCTAGTTTATTTAGTATCAGGTGAGGTATGCATGTCTGGAGGTCAGAGAACAACTCCTGGGCATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTAAAGCTGAAGTTTGAAAGCATTTGGAGCAATGTGGAGATTGGACAATTGAGATACATTTGGGGGTaGGGGTGTATAATAAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: ELKLKFESIWSNVEIGQLRYIWG*GCIINN Trigger: GTTGTTTATTATACACCCCAACCCCCAAATGTATCT...CAATTGTCCAATCTCCACATTGCTCCAAATGCTTTCAAACTTCAGCTTTAGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCCCTGGATGATCTGCAGCCTCCCTCCAAAGGAACGCTGCTCGGGCAGGGGCATTCTGCCAGATTaGGGAACTGATACCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQPWMICSLPPKERCSGRGILPD*GTDTGC Trigger: GCAGCCGGTATCAGTTCCGCAATCTGGCAGAATGCC...CCTGCCCGAGCAGCGTTCCTTTGGAGGGAGGCTGCAGATCATCCAGGGCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | CGCTGCTCGGGCAGGGCGGTTAATCGAGAAAAGTCTCCTGTGTGTGTCAGTGCTGCATGCTCCTGTCTGTaGAGAGCCCGGCGAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RCSGRAVNREKSPVCVSAACSCL*RARRAQ Trigger: CTGTGCTCGCCGGGCTCTGCACAGACAGGAGCATGC...AGCACTGACACACACAGGAGACTTTTCTCGATTAACCGCCCTGCCCGAGCAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103036.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTGTGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTATGCCAGCGTGAGGGCAATCTTCTaGCGCACGGGCTCCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: PVCVSALLSCTGTQVYASVRAIF*RTGSSI Trigger: GATTGAGGAGCCCGTGCGCCAGAAGATTGCCCTCAC...GCTGGCATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | GGCGCACGGGCTCCTCAATCCAGTCTGCACTGGCCAAGTGAAACCTTACTTCAGTGTCCAGGCTGTAGATaGTCTGGAACGTGGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GARAPQSSLHWPSETLLQCPGCR*SGTWCR Trigger: ACGGCACCACGTTCCAGAGCATCTACAGCCTGGACA...CTGAAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTGAGGAGCCCGTGCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122946.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGCAGCCCTGGATGATCTGCAGCCTCCCTCCAAAGGAACGCTGCTCGGGCCAATCCAGTCTGCACTaGCCAAGTGAAACCTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: KGQPWMICSLPPKERCSGQSSLH*PSETLL Trigger: AAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTG...GCCCGAGCAGCGTTCCTTTGGAGGGAGGCTGCAGATCATCCAGGGCTGCCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAGTCTCCTGTGTGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCGTGAGGGCAATCTTCTaGCGCACGGGCTCCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: EKSPVCVSALLSCTGTQVVRAIF*RTGSSI Trigger: GATTGAGGAGCCCGTGCGCCAGAAGATTGCCCTCAC...GACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGGAGACTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTCTCCTGTGTGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTAGCCAGATTGCGGAACTaGTACCGGCTGCTCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVSCVCQCSAELHWHSGLARLRN*YRLLSE Trigger: CTCTGAGAGCAGCCGGTATCAGTTCCGCAATCTGGC...TAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGGAGACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | GAAAAGTCTCCTGTGTGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTGTCCAGGCTGTAGATaGTCTGGAACGTGGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EKSPVCVSALLSCTGTQVCPGCR*SGTWCR Trigger: ACGGCACCACGTTCCAGAGCATCTACAGCCTGGACA...GACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGGAGACTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGGATAACGGAAGGGGCAGCCCTGGATGATCTGCAGCCTCCCTCCAAAGGACTCCTCAATCCAGTCTaGACTGGCCAAGTGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RWITEGAALDDLQPPSKGLLNPV*TGQVKP Trigger: AGGTTTCACTTGGCCAGTGCAGACTGGATTGAGGAG...TCCTTTGGAGGGAGGCTGCAGATCATCCAGGGCTGCCCCTTCCGTTATCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | AACGCTGCTCGGGCAGGGCGGTTAATCGAGAAAAGTCTCCTGTGTGTGTCAGTGGGCATTCTGCCAGATTaGGGAACTGATACCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NAARAGRLIEKSLLCVSVGILPD*GTDTGC Trigger: GCAGCCGGTATCAGTTCCGCAATCTGGCAGAATGCC...CACTGACACACACAGGAGACTTTTCTCGATTAACCGCCCTGCCCGAGCAGCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | GAAAAGTCTCCTGTGTGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCGGCATTCTGCCAGATTaGGGAACTGATACCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKSPVCVSALLSCTGTQVGILPD*GTDTGC Trigger: GCAGCCGGTATCAGTTCCGCAATCTGGCAGAATGCC...GACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGGAGACTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGGATAACGGAAGGGGCAGCCCTGGATGATCTGCAGCCTCCCTCCAAAGGAACTGCTGGCTTGTTTTaGATGCTCCTGTCTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RWITEGAALDDLQPPSKGTAGLF*MLLSVQ Trigger: CTGCACAGACAGGAGCATGCAAAACAAGCCAGCAGT...TCCTTTGGAGGGAGGCTGCAGATCATCCAGGGCTGCCCCTTCCGTTATCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103036.5 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGTGTGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTATGCCACTTTGTTCACATTCTaGCCACCAGGACCGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPVCVSALLSCTGTQVYATLFTF*PPGPLL Trigger: GAGCAGCGGTCCTGGTGGGCAGAATGTGAACAAAGT...GGCATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103036.5 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCTCGGGCAGGGCGGTTAATCGAGAAAAGTCTCCTGTGTGTGTCAGTGCTCACTTTGTTCACATTCTaGCCACCAGGACCGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AARAGRLIEKSLLCVSVLTLFTF*PPGPLL Trigger: GAGCAGCGGTCCTGGTGGGCAGAATGTGAACAAAGT...GAGCACTGACACACACAGGAGACTTTTCTCGATTAACCGCCCTGCCCGAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103036.5 ENSMUST00000153983.8 |
||
| 3UTR CAA 72 bp | CGGGACTTCTGGCCTGGGAATGGAGCTCAATGGATTTaGGGGCTCTATGTGTCTACCTGCCCGGTACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RDFWPGNGAQWI*GLYVSTCPVHF Trigger: GAAGTGTACCGGGCAGGTAGACACATAGAGCCCCAAAATCCATTGAGCTCCATTCCCAGGCCAGAAGTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | ATAACGGAAGGGGCAGCCCTGGATGATCTGCAGCCTCCCTCCAAAGGAACGCTGCCAGAGGGATGTAACTaGTGGCTTGTTTTGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITEGAALDDLQPPSKGTLPEGCN*WLVLHA Trigger: AGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGG...CAGCGTTCCTTTGGAGGGAGGCTGCAGATCATCCAGGGCTGCCCCTTCCGTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGGATAACGGAAGGGGCAGCCCTGGATGATCTGCAGCCTCCCTCCAAAGGATCATCTTTTCAATCCTaGGTCTCTGAAGCCGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RWITEGAALDDLQPPSKGSSFQS*VSEAEH Trigger: ATGCTCGGCTTCAGAGACTCAGGATTGAAAAGATGA...TCCTTTGGAGGGAGGCTGCAGATCATCCAGGGCTGCCCCTTCCGTTATCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTATTGCAGCCAGTGATTCATGAGGTGGATAACGGAAGGGGCAGCCCTGGATGCTCTGGAACGTGGTaGCGTCTACCTGTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLLQPVIHEVDNGRGSPGCSGTW*RLPVCA Trigger: TGCACAGACAGGTAGACGGCACCACGTTCCAGAGCA...TCCAGGGCTGCCCCTTCCGTTATCCACCTCATGAATCACTGGCTGCAATAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | TCGGGCAGGGCGGTTAATCGAGAAAAGTCTCCTGTGTGTGTCAGTGCTCTGCTGCTCCTCAATCCAGTCTaGACTGGCCAAGTGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SGRAVNREKSPVCVSALLLLNPV*TGQVKP Trigger: AGGTTTCACTTGGCCAGTGCAGACTGGATTGAGGAG...CAGCAGAGCACTGACACACACAGGAGACTTTTCTCGATTAACCGCCCTGCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR CCA 90 bp | ATAACGGAAGGGGCAGCCCTGGATGATCTGCAGCCTCCCTCCAAAGGAACGCTGCAATCCAGTCTGCACTaGCCAAGTGAAACCTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: ITEGAALDDLQPPSKGTLQSSLH*PSETLL Trigger: AAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTG...CAGCGTTCCTTTGGAGGGAGGCTGCAGATCATCCAGGGCTGCCCCTTCCGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCTCGGGCAGGGCGGTTAATCGAGAAAAGTCTCCTGTGTGTGTCAGTGCTCTCTTATTTTTATGCGTaGGGGCAATCTTCTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AARAGRLIEKSLLCVSVLSYFYA*GQSSGA Trigger: TGCGCCAGAAGATTGCCCTCACGCATAAAAATAAGA...GAGCACTGACACACACAGGAGACTTTTCTCGATTAACCGCCCTGCCCGAGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | TCGGGCAGGGCGGTTAATCGAGAAAAGTCTCCTGTGTGTGTCAGTGCTCTGCTGCCAGAGGGATGTAACTaGTGGCTTGTTTTGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGRAVNREKSPVCVSALLPEGCN*WLVLHA Trigger: AGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGG...CAGCAGAGCACTGACACACACAGGAGACTTTTCTCGATTAACCGCCCTGCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCGGGCAGGGCGGTTAATCGAGAAAAGTCTCCTGTGTGTGTCAGTGCTCTGCCAGAGGGATGTAACTaGTGGCTTGTTTTGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSGRAVNREKSPVCVSALPEGCN*WLVLHA Trigger: AGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGG...CAGAGCACTGACACACACAGGAGACTTTTCTCGATTAACCGCCCTGCCCGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR TCA 90 bp | TCGGGCAGGGCGGTTAATCGAGAAAAGTCTCCTGTGTGTGTCAGTGCTCTGCTGTCATCTTTTCAATCCTaGGTCTCTGAAGCCGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGRAVNREKSPVCVSALLSSFQS*VSEAEH Trigger: ATGCTCGGCTTCAGAGACTCAGGATTGAAAAGATGA...CAGCAGAGCACTGACACACACAGGAGACTTTTCTCGATTAACCGCCCTGCCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR TCA 90 bp | GAACGCTGCTCGGGCAGGGCGGTTAATCGAGAAAAGTCTCCTGTGTGTGTCAGTTCATCTTTTCAATCCTaGGTCTCTGAAGCCGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERCSGRAVNREKSPVCVSSSFQS*VSEAEH Trigger: ATGCTCGGCTTCAGAGACTCAGGATTGAAAAGATGA...ACTGACACACACAGGAGACTTTTCTCGATTAACCGCCCTGCCCGAGCAGCGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAAGTGAAACCTTACTTCAGCCTTGGAATTCACTTTGTTCACATTCTGCCCTGCTCTGGAACGTGGTaGCGTCTACCTGTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQVKPYFSLGIHFVHILPCSGTW*RLPVCA Trigger: TGCACAGACAGGTAGACGGCACCACGTTCCAGAGCA...GGGCAGAATGTGAACAAAGTGAATTCCAAGGCTGAAGTAAGGTTTCACTTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122946.8 |
||
| CDS-3UTR GCA 90 bp | AATTGTTATAAACCCCCACCCAAGTCCAGTGACAGCTCATCAGCTTGGAGGTTTTGCTCTGGAACGTGGTaGCGTCTACCTGTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NCYKPPPKSSDSSSAWRFCSGTW*RLPVCA Trigger: TGCACAGACAGGTAGACGGCACCACGTTCCAGAGCA...AAACCTCCAAGCTGATGAGCTGTCACTGGACTTGGGTGGGGGTTTATAACAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCTCCTGTGTGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTATCAATCCAGTCTGCACTaGCCAAGTGAAACCTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: KSPVCVSALLSCTGTQVYQSSLH*PSETLL Trigger: AAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTG...ATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGGAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR TCA 90 bp | CGATGTTTATTGCAGCCAGTGATTCATGAGGTGGATAACGGAAGGGGCAGCCCTTCTTATTTTTATGCGTaGGGGCAATCTTCTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RCLLQPVIHEVDNGRGSPSYFYA*GQSSGA Trigger: TGCGCCAGAAGATTGCCCTCACGCATAAAAATAAGA...AGGGCTGCCCCTTCCGTTATCCACCTCATGAATCACTGGCTGCAATAAACATCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR TCA 90 bp | GGACTTCTGGCCTGGGAATGGAGCTCAATGGATTTTGGGGCTCTATGTGTCTACTCTTATTTTTATGCGTaGGGGCAATCTTCTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLLAWEWSSMDFGALCVYSYFYA*GQSSGA Trigger: TGCGCCAGAAGATTGCCCTCACGCATAAAAATAAGA...GTAGACACATAGAGCCCCAAAATCCATTGAGCTCCATTCCCAGGCCAGAAGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR TCA 90 bp | TTACATTTTAGGCCTGGATTCTCTTGCATGGCAGAACCCTGGAGCAGAATAAAAGCCAGATTGCGGAACTaGTACCGGCTGCTCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHFRPGFSCMAEPWSRIKARLRN*YRLLSE Trigger: CTCTGAGAGCAGCCGGTATCAGTTCCGCAATCTGGC...TTTTATTCTGCTCCAGGGTTCTGCCATGCAAGAGAATCCAGGCCTAAAATGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGTGTGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTATGCCTTGATCTTATTTTTATaGGTGAGGGCAATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVCVSALLSCTGTQVYALILFL*VRAIFW Trigger: CCAGAAGATTGCCCTCACGCATAAAAATAAGATCAA...GGCATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTCTCCTGTGTGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTATTGATCTTATTTTTATaGGTGAGGGCAATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KVSCVCQCSAELHWHSGLLILFL*VRAIFW Trigger: CCAGAAGATTGCCCTCACGCATAAAAATAAGATCAA...TAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGGAGACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR CAA 72 bp | TTATATTTGTGTGTGCACATGGATGCTTCATGGAGCTaGTGGAGGTCAGAAACCACCTCTCCTGAGTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYLCVHMDASWS*WRSETTSPESV Trigger: AACTGACTCAGGAGAGGTGGTTTCTGACCTCCACAAGCTCCATGAAGCATCCATGTGCACACACAAATATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCGATCCTTCCAGTAACGATAGAAACATTCAGACACTACGTATGTACTTTGCTCCTCAATCCAGTCTaGACTGGCCAAGTGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: FPILPVTIETFRHYVCTLLLNPV*TGQVKP Trigger: AGGTTTCACTTGGCCAGTGCAGACTGGATTGAGGAG...CAAAGTACATACGTAGTGTCTGAATGTTTCTATCGTTACTGGAAGGATCGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| 3UTR CAA 72 bp | GTAACGATAGAAACATTCAGACACTACGTATGTACTTaGCAAATACACAATACACCGGAGGGCGGGCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTIETFRHYVCT*QIHNTPEGGRQ Trigger: TTGACGCCCGCCCTCCGGTGTATTGTGTATTTGCAAAGTACATACGTAGTGTCTGAATGTTTCTATCGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR GCA 90 bp | GCAAATTTACCACATTTTCATGCCACCCAACACAATGCTTTACCTCCTATAGATTTGATCTTATTTTTATaGGTGAGGGCAATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ANLPHFHATQHNALPPIDLILFL*VRAIFW Trigger: CCAGAAGATTGCCCTCACGCATAAAAATAAGATCAA...ATCTATAGGAGGTAAAGCATTGTGTTGGGTGGCATGAAAATGTGGTAAATTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS GCA 90 bp | ACTCGGGGTACAGCTTGTCCAGGCTGTAGATGCTCTGGAACGTGGTaGCGTCTACCTGTCTGTGCAGAGCCCGGCGAGCACAGCGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TRGTACPGCRCSGTW*RLPVCAEPGEHSAR Trigger: CCGCGCGCTGTGCTCGCCGGGCTCTGCACAGACAGGTAGACGGCACCACGTTCCAGAGCATCTACAGCCTGGACAAGCTGTACCCCGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106539.10 ENSMUST00000122946.8 ENSMUST00000153983.8 |
||
| CDS CCA 90 bp | TGGACTCGGGGTACAGCTTGTCCAGGCTGTAGATGCTCTGGAACGTaGTGCCGTCTACCTGTCTGTGCAGAGCCCGGCGAGCACAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: WTRGTACPGCRCSGT*CRLPVCAEPGEHSA Trigger: CGCGCTGTGCTCGCCGGGCTCTGCACAGACAGGTAGACGGCACCACGTTCCAGAGCATCTACAGCCTGGACAAGCTGTACCCCGAGTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106539.10 ENSMUST00000122946.8 ENSMUST00000153983.8 |
||
| CDS GCA 90 bp | TATCCGCGCCCTTGGACTCGGGGTACAGCTTGTCCAGGCTGTAGATaGTCTGGAACGTGGTGCCGTCTACCTGTCTGTGCAGAGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: YPRPWTRGTACPGCR*SGTWCRLPVCAEPG Trigger: GCCGGGCTCTGCACAGACAGGTAGACGGCACCACGTTCCAGAGCATCTACAGCCTGGACAAGCTGTACCCCGAGTCCAAGGGCGCGGATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106539.10 ENSMUST00000122946.8 ENSMUST00000153983.8 |
||
| CDS CCA 90 bp | CTTGTTTTGCATGCTCCGGGACCTTCCAGGCGGTATCCGCGCCCTTaGACTCGGGGTACAGCTTGTCCAGGCTGTAGATGCTCTGGAACG | + |
|
Preference number: 5 (lower is better) Translates to: LVLHAPGPSRRYPRP*TRGTACPGCRCSGT Trigger: CGTTCCAGAGCATCTACAGCCTGGACAAGCTGTACCCCGAGTCCAAGGGCGCGGATACCGCCTGGAAGGTCCCGGAGCATGCAAAACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS GCA 90 bp | TTCAGCCTTGGAATTCACCAGAGGGATGTAACTGCTGGCTTGTTTTaGATGCTCCGGGACCTTCCAGGCGGTATCCGCGCCCTTGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: FSLGIHQRDVTAGLF*MLRDLPGGIRALGL Trigger: GAGTCCAAGGGCGCGGATACCGCCTGGAAGGTCCCGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGTGAATTCCAAGGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106539.10 |
||
| CDS-3UTR CAA 90 bp | AAGGGGCAGCCCTGGATGATCTGCAGCCTCCCTCCAAAGGAACGCTGCTCGGGCAGCTCTCCTGCCTTGTaGATCTTATTTTTATGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: KGQPWMICSLPPKERCSGSSPAL*ILFLCV Trigger: CACGCATAAAAATAAGATCAACAAGGCAGGAGAGCT...GCCCGAGCAGCGTTCCTTTGGAGGGAGGCTGCAGATCATCCAGGGCTGCCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTATGCCAGCAGGGAGAACTGCTGGCTTGTTTaGCATGCTCCTGTCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CVSALLSCTGTQVYASRENCWLV*HAPVCA Trigger: TGCACAGACAGGAGCATGCAAAACAAGCCAGCAGTT...CTCCCTGCTGGCATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103036.5 |
||
| CDS GCA 90 bp | ATGCGTGAGGGCAATCTTCTGGCGCACGGGCTCCTCAATCCAGTCTaGACTGGCCAAGTGAAACCTTACTTCAGCCTTGGAATTCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: MREGNLLAHGLLNPV*TGQVKPYFSLGIHQ Trigger: CTGGTGAATTCCAAGGCTGAAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTGAGGAGCCCGTGCGCCAGAAGATTGCCCTCACGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106539.10 |
||
| CDS CCA 90 bp | GAAACCTTACTTCAGCCTTGGAATTCACCAGAGGGATGTAACTGCTaGCTTGTTTTGCATGCTCCGGGACCTTCCAGGCGGTATCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ETLLQPWNSPEGCNC*LVLHAPGPSRRYPR Trigger: GCGCGGATACCGCCTGGAAGGTCCCGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGTGAATTCCAAGGCTGAAGTAAGGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106539.10 |
||
| CDS GCA 90 bp | AGTGAAACCTTACTTCAGCCTTGGAATTCACCAGAGGGATGTAACTaGTGGCTTGTTTTGCATGCTCCGGGACCTTCCAGGCGGTATCCG | + |
|
Preference number: 5 (lower is better) Translates to: SETLLQPWNSPEGCN*WLVLHAPGPSRRYP Trigger: CGGATACCGCCTGGAAGGTCCCGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGTGAATTCCAAGGCTGAAGTAAGGTTTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106539.10 |
||
| CDS CCA 90 bp | TCTGAAGCCGAGCATCTTCCTTGGATGGCTCTTTGGGTACCTGGCTaGCCTCGGCAATCATGTCTCGAATTTTCTGTAGGCATTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SEAEHLPWMALWVPG*PRQSCLEFSVGILP Trigger: TGGCAGAATGCCTACAGAAAATTCGAGACATGATTGCCGAGGCCAGCCAGGTACCCAAAGAGCCATCCAAGGAAGATGCTCGGCTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTATGCCAGCAGGGAGAGCTCTCCTGCCTTGTaGATCTTATTTTTATGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: CVSALLSCTGTQVYASRESSPAL*ILFLCV Trigger: CACGCATAAAAATAAGATCAACAAGGCAGGAGAGCT...CTCCCTGCTGGCATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTATGCCAGCAGGGAGACCAGCTCTCCTGCCTaGTTGATCTTATTTTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: CVSALLSCTGTQVYASRETSSPA*LILFLC Trigger: GCATAAAAATAAGATCAACAAGGCAGGAGAGCTGGT...CTCCCTGCTGGCATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS GCA 90 bp | GCGGAACTGATACCGGCTGCTCTCAGAGGTAAGTACCAGCTCTCCTaGCTTGTTGATCTTATTTTTATGCGTGAGGGCAATCTTCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AELIPAALRGKYQLS*LVDLIFMREGNLLA Trigger: CGCCAGAAGATTGCCCTCACGCATAAAAATAAGATCAACAAGGCAGGAGAGCTGGTACTTACCTCTGAGAGCAGCCGGTATCAGTTCCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS CCA 90 bp | CATCTTTTCAATCCTGAGTCTCTGAAGCCGAGCATCTTCCTTGGATaGCTCTTTGGGTACCTGGCTGGCCTCGGCAATCATGTCTCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HLFNPESLKPSIFLG*LFGYLAGLGNHVSN Trigger: ATTCGAGACATGATTGCCGAGGCCAGCCAGGTACCCAAAGAGCCATCCAAGGAAGATGCTCGGCTTCAGAGACTCAGGATTGAAAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCTCCTGTGTGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTATGCCTTGGAATTCACTTaGTTCACATTCTGCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: KSPVCVSALLSCTGTQVYALEFT*FTFCPP Trigger: TGGTGGGCAGAATGTGAACAAAGTGAATTCCAAGGC...ATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGGAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103036.5 ENSMUST00000153983.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTATGCCAGCAGGGAGAACCTTACTTCAGCCTaGGAATTCACTTTGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: CVSALLSCTGTQVYASRENLTSA*EFTLFT Trigger: TGTGAACAAAGTGAATTCCAAGGCTGAAGTAAGGTT...CTCCCTGCTGGCATAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103036.5 ENSMUST00000153983.8 |
||
| CDS TCA 90 bp | ATCATGTCTCGAATTTTCTGTAGGCATTCTGCCAGATTGCGGAACTaGTACCGGCTGCTCTCAGAGGTAAGTACCAGCTCTCCTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IMSRIFCRHSARLRN*YRLLSEVSTSSPAL Trigger: CAAGGCAGGAGAGCTGGTACTTACCTCTGAGAGCAGCCGGTATCAGTTCCGCAATCTGGCAGAATGCCTACAGAAAATTCGAGACATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS TCA 90 bp | TTCTGTCGTAGCCTTTCCCGATTCATCTTTTCAATCCTGAGTCTCTaGAGCCGAGCATCTTCCTTGGATGGCTCTTTGGGTACCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FCRSLSRFIFSILSL*SRASSLDGSLGTWL Trigger: CAGCCAGGTACCCAAAGAGCCATCCAAGGAAGATGCTCGGCTTCAGAGACTCAGGATTGAAAAGATGAATCGGGAAAGGCTACGACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS GCA 90 bp | TCAGAGGTAAGTACCAGCTCTCCTGCCTTGTTGATCTTATTTTTATaGGTGAGGGCAATCTTCTGGCGCACGGGCTCCTCAATCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEVSTSSPALLILFL*VRAIFWRTGSSIQS Trigger: AGACTGGATTGAGGAGCCCGTGCGCCAGAAGATTGCCCTCACGCATAAAAATAAGATCAACAAGGCAGGAGAGCTGGTACTTACCTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS GCA 90 bp | TGTTCACATTCTGCCCACCAGGACCGCTGCTCCGACAGTAAGATATaGTTAACCGATCCAGAGGGATGTAACTGCTGGCTTGTTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSHSAHQDRCSDSKI*LTDPEGCNCWLVLH Trigger: ATGCAAAACAAGCCAGCAGTTACATCCCTCTGGATCGGTTAAGCATATCTTACTGTCGGAGCAGCGGTCCTGGTGGGCAGAATGTGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103036.5 ENSMUST00000153983.8 |
||
| CDS GCA 90 bp | CAGCCTTGGAATTCACTTTGTTCACATTCTGCCCACCAGGACCGCTaGTCCGACAGTAAGATATGCTTAACCGATCCAGAGGGATGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: QPWNSLCSHSAHQDR*SDSKICLTDPEGCN Trigger: GTTACATCCCTCTGGATCGGTTAAGCATATCTTACTGTCGGAGCAGCGGTCCTGGTGGGCAGAATGTGAACAAAGTGAATTCCAAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103036.5 ENSMUST00000153983.8 |
||
| CDS CCA 90 bp | CCTCAATCCAGTCTGCACTGGCCAAGTGAAACCTTACTTCAGCCTTaGAATTCACCAGAGGGATGTAACTGCTGGCTTGTTTTGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQSSLHWPSETLLQP*NSPEGCNCWLVLHA Trigger: AGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGTGAATTCCAAGGCTGAAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106539.10 |
||
| CDS-3UTR CAA 90 bp | AAAGTCTCCTGTGTGTGTCAGTGCTCTGCTGAGCTGCACTGGCACTCAGGTCTAACCAGCTCTCCTGCCTaGTTGATCTTATTTTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: KVSCVCQCSAELHWHSGLTSSPA*LILFLC Trigger: GCATAAAAATAAGATCAACAAGGCAGGAGAGCTGGT...TAGACCTGAGTGCCAGTGCAGCTCAGCAGAGCACTGACACACACAGGAGACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS-3UTR CAA 90 bp | TCGGGCAGGGCGGTTAATCGAGAAAAGTCTCCTGTGTGTGTCAGTGCTCTGCTGAACCTTACTTCAGCCTaGGAATTCACTTTGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SGRAVNREKSPVCVSALLNLTSA*EFTLFT Trigger: TGTGAACAAAGTGAATTCCAAGGCTGAAGTAAGGTT...CAGCAGAGCACTGACACACACAGGAGACTTTTCTCGATTAACCGCCCTGCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103036.5 ENSMUST00000153983.8 |
||
| CDS-3UTR CAA 90 bp | CTAATGGTACTCAATTTTCAGGCTAATGTGGAATCCAAATTCTGGTCTCCGGGAGCCTTGGAATTCACTTaGTTCACATTCTGCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LMVLNFQANVESKFWSPGALEFT*FTFCPP Trigger: TGGTGGGCAGAATGTGAACAAAGTGAATTCCAAGGC...TCCCGGAGACCAGAATTTGGATTCCACATTAGCCTGAAAATTGAGTACCATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153983.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCTCTGACCTCCAGACATGCATACCTCACCTGATACTAAATAAACTAGAGAGCTCTCCTGCCTTGTaGATCTTATTTTTATGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFSDLQTCIPHLILNKLESSPAL*ILFLCV Trigger: CACGCATAAAAATAAGATCAACAAGGCAGGAGAGCT...CTCTAGTTTATTTAGTATCAGGTGAGGTATGCATGTCTGGAGGTCAGAGAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS CCA 72 bp | CATGCTCCGGGACCTTCCAGGCGGTATCCGCGCCCTTaGACTCGGGGTACAGCTTGTCCAGGCTGTAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: HAPGPSRRYPRP*TRGTACPGCRC Trigger: GCATCTACAGCCTGGACAAGCTGTACCCCGAGTCCAAGGGCGCGGATACCGCCTGGAAGGTCCCGGAGCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS CCA 72 bp | AACCGATCGGGACCTTCCAGGCGGTATCCGCGCCCTTaGACTCGGGGTACAGCTTGTCCAGGCTGTAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: NRSGPSRRYPRP*TRGTACPGCRC Trigger: GCATCTACAGCCTGGACAAGCTGTACCCCGAGTCCAAGGGCGCGGATACCGCCTGGAAGGTCCCGATCGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122946.8 |
||
| CDS GCA 72 bp | ACAGCTTGTCCAGGCTGTAGATGCTCTGGAACGTGGTaGCGTCTACCTGTCTGTGCAGAGCCCGGCGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TACPGCRCSGTW*RLPVCAEPGEH Trigger: GTGCTCGCCGGGCTCTGCACAGACAGGTAGACGGCACCACGTTCCAGAGCATCTACAGCCTGGACAAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106539.10 ENSMUST00000122946.8 ENSMUST00000153983.8 |
||
| CDS CCA 72 bp | GGTACAGCTTGTCCAGGCTGTAGATGCTCTGGAACGTaGTGCCGTCTACCTGTCTGTGCAGAGCCCGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GTACPGCRCSGT*CRLPVCAEPGE Trigger: CTCGCCGGGCTCTGCACAGACAGGTAGACGGCACCACGTTCCAGAGCATCTACAGCCTGGACAAGCTGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106539.10 ENSMUST00000122946.8 ENSMUST00000153983.8 |
||
| CDS GCA 72 bp | CCTTGGACTCGGGGTACAGCTTGTCCAGGCTGTAGATaGTCTGGAACGTGGTGCCGTCTACCTGTCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PWTRGTACPGCR*SGTWCRLPVCA Trigger: TGCACAGACAGGTAGACGGCACCACGTTCCAGAGCATCTACAGCCTGGACAAGCTGTACCCCGAGTCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106539.10 ENSMUST00000122946.8 ENSMUST00000153983.8 |
||
| CDS CAA 90 bp | CTTCAGCCTTGGAATTCACCAGAGGGATGTAACTGCTGGCTTGTTTaGCATGCTCCGGGACCTTCCAGGCGGTATCCGCGCCCTTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: LQPWNSPEGCNCWLV*HAPGPSRRYPRPWT Trigger: AGTCCAAGGGCGCGGATACCGCCTGGAAGGTCCCGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGTGAATTCCAAGGCTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106539.10 |
||
| CDS CAA 90 bp | AAGATATGCTTAACCGATCCAGAGGGATGTAACTGCTGGCTTGTTTaGCATGCTCCTGTCTGTGCAGAGCCCGGCGAGCACAGCGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: KICLTDPEGCNCWLV*HAPVCAEPGEHSAR Trigger: CCGCGCGCTGTGCTCGCCGGGCTCTGCACAGACAGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGATCGGTTAAGCATATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103036.5 |
||
| CDS CAA 72 bp | TTAACCGATCCAGAGGGATGTAACTGCTGGCTTGTTTaGCATGCTCCGGGACCTTCCAGGCGGTATCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LTDPEGCNCWLV*HAPGPSRRYPR Trigger: GCGCGGATACCGCCTGGAAGGTCCCGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGATCGGTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153983.8 |
||
| CDS CAA 90 bp | CCTTACTTCAGCCTTGGAATTCACCAGAGGGATGTAACTGCTGGCTaGTTTTGCATGCTCCGGGACCTTCCAGGCGGTATCCGCGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PYFSLGIHQRDVTAG*FCMLRDLPGGIRAL Trigger: AAGGGCGCGGATACCGCCTGGAAGGTCCCGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGTGAATTCCAAGGCTGAAGTAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106539.10 |
||
| CDS TCA 72 bp | CGCACGGGCTCCTCAATCCAGTCTGCACTGGCCAAGTaGAACCTTACTTCAGCCTTGGAATTCACCAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RTGSSIQSALAK*NLTSALEFTRG Trigger: CCCTCTGGTGAATTCCAAGGCTGAAGTAAGGTTTCACTTGGCCAGTGCAGACTGGATTGAGGAGCCCGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106539.10 |
||
| CDS CCA 72 bp | CTTCAGCCTTGGAATTCACCAGAGGGATGTAACTGCTaGCTTGTTTTGCATGCTCCGGGACCTTCCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LQPWNSPEGCNC*LVLHAPGPSRR Trigger: CCGCCTGGAAGGTCCCGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGTGAATTCCAAGGCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106539.10 |
||
| CDS CCA 72 bp | GTCTCTGAAGCCGAGCATCTTCCTTGGATGGCTCTTTaGGTACCTGGCTGGCCTCGGCAATCATGTCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: VSEAEHLPWMAL*VPGWPRQSCLE Trigger: TTCGAGACATGATTGCCGAGGCCAGCCAGGTACCCAAAGAGCCATCCAAGGAAGATGCTCGGCTTCAGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS CAA 72 bp | TTAACCGATCCAGAGGGATGTAACTGCTGGCTTGTTTaGCATGCTCCTGTCTGTGCAGAGCCCGGCGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LTDPEGCNCWLV*HAPVCAEPGEH Trigger: GTGCTCGCCGGGCTCTGCACAGACAGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGATCGGTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103036.5 |
||
| CDS CCA 72 bp | AATCCTGAGTCTCTGAAGCCGAGCATCTTCCTTGGATaGCTCTTTGGGTACCTGGCTGGCCTCGGCAATCAT | + |
|
Preference number: 6 (lower is better) Translates to: NPESLKPSIFLG*LFGYLAGLGNH Trigger: ATGATTGCCGAGGCCAGCCAGGTACCCAAAGAGCCATCCAAGGAAGATGCTCGGCTTCAGAGACTCAGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS CAA 72 bp | AGCCTTGGAATTCACCAGAGGGATGTAACTGCTGGCTaGTTTTGCATGCTCCGGGACCTTCCAGGCGGTATC | + |
|
Preference number: 6 (lower is better) Translates to: SLGIHQRDVTAG*FCMLRDLPGGI Trigger: GATACCGCCTGGAAGGTCCCGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGTGAATTCCAAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106539.10 |
||
| CDS CCA 72 bp | GAGCATCTTCCTTGGATGGCTCTTTGGGTACCTGGCTaGCCTCGGCAATCATGTCTCGAATTTTCTGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EHLPWMALWVPG*PRQSCLEFSVG Trigger: GCCTACAGAAAATTCGAGACATGATTGCCGAGGCCAGCCAGGTACCCAAAGAGCCATCCAAGGAAGATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS CCA 72 bp | AGCCGAGCATCTTCCTTGGATGGCTCTTTGGGTACCTaGCTGGCCTCGGCAATCATGTCTCGAATTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRASSLDGSLGT*LASAIMSRIFC Trigger: ACAGAAAATTCGAGACATGATTGCCGAGGCCAGCCAGGTACCCAAAGAGCCATCCAAGGAAGATGCTCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS GCA 72 bp | TTACTTCAGCCTTGGAATTCACCAGAGGGATGTAACTaGTGGCTTGTTTTGCATGCTCCGGGACCTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLQPWNSPEGCN*WLVLHAPGPSR Trigger: CCTGGAAGGTCCCGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGTGAATTCCAAGGCTGAAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106539.10 |
||
| CDS GCA 72 bp | AGTACCAGCTCTCCTGCCTTGTTGATCTTATTTTTATaGGTGAGGGCAATCTTCTGGCGCACGGGCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: STSSPALLILFL*VRAIFWRTGSS Trigger: TGAGGAGCCCGTGCGCCAGAAGATTGCCCTCACGCATAAAAATAAGATCAACAAGGCAGGAGAGCTGGTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS TCA 72 bp | CGAATTTTCTGTAGGCATTCTGCCAGATTGCGGAACTaGTACCGGCTGCTCTCAGAGGTAAGTACCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RIFCRHSARLRN*YRLLSEVSTSS Trigger: AGAGCTGGTACTTACCTCTGAGAGCAGCCGGTATCAGTTCCGCAATCTGGCAGAATGCCTACAGAAAATTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS GCA 72 bp | AGTAAGATATGCTTAACCGATCCAGAGGGATGTAACTaGTGGCTTGTTTTGCATGCTCCGGGACCTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SKICLTDPEGCN*WLVLHAPGPSR Trigger: CCTGGAAGGTCCCGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGATCGGTTAAGCATATCTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153983.8 |
||
| CDS TCA 72 bp | AGCCTTTCCCGATTCATCTTTTCAATCCTGAGTCTCTaGAGCCGAGCATCTTCCTTGGATGGCTCTTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SLSRFIFSILSL*SRASSLDGSLG Trigger: ACCCAAAGAGCCATCCAAGGAAGATGCTCGGCTTCAGAGACTCAGGATTGAAAAGATGAATCGGGAAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS GCA 72 bp | AATTCACTTTGTTCACATTCTGCCCACCAGGACCGCTaGTCCGACAGTAAGATATGCTTAACCGATCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: NSLCSHSAHQDR*SDSKICLTDPE Trigger: CTCTGGATCGGTTAAGCATATCTTACTGTCGGAGCAGCGGTCCTGGTGGGCAGAATGTGAACAAAGTGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103036.5 ENSMUST00000153983.8 |
||
| CDS CCA 72 bp | AGTCTGCACTGGCCAAGTGAAACCTTACTTCAGCCTTaGAATTCACCAGAGGGATGTAACTGCTGGCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SLHWPSETLLQP*NSPEGCNCWLV Trigger: AACAAGCCAGCAGTTACATCCCTCTGGTGAATTCCAAGGCTGAAGTAAGGTTTCACTTGGCCAGTGCAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106539.10 |
||
| CDS GCA 72 bp | ATACCGGCTGCTCTCAGAGGTAAGTACCAGCTCTCCTaGCTTGTTGATCTTATTTTTATGCGTGAGGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: IPAALRGKYQLS*LVDLIFMREGN Trigger: ATTGCCCTCACGCATAAAAATAAGATCAACAAGGCAGGAGAGCTGGTACTTACCTCTGAGAGCAGCCGGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103036.5 ENSMUST00000106539.10 ENSMUST00000153983.8 |
||
| CDS GCA 72 bp | AGTAAGATATGCTTAACCGATCCAGAGGGATGTAACTaGTGGCTTGTTTTGCATGCTCCTGTCTGTGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SKICLTDPEGCN*WLVLHAPVCAE Trigger: CTCTGCACAGACAGGAGCATGCAAAACAAGCCAGCAGTTACATCCCTCTGGATCGGTTAAGCATATCTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103036.5 |
||