Pregenerated sensors for MRPL57 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021967Ensembl transcript IDs: ENSMUST00000022538.5
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAAGATTTTCCTGCCTCCACCTCTTAATGTTGGGATTACAGGTGTaGAACAAACGCCTAGGTAGGGTCCCAAGTATTCCGTATGAGACA | + |
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Preference number: 1 (lower is better) Translates to: QRFSCLHLLMLGLQV*NKRLGRVPSIPYET Trigger: TGTCTCATACGGAATACTTGGGACCCTACCTAGGCGTTTGTTTCACACCTGTAATCCCAACATTAAGAGGTGGAGGCAGGAAAATCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR GCA 90 bp | ATGGAAGTTGACCTAACACTTCAGATCCTACTTCCACTTACAGAATaGTGTGAAATCAAAGGCAGGCTCTATTCTAGAGCAGTGGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: MEVDLTLQILLPLTE*CEIKGRLYSRAVVL Trigger: GAGAACCACTGCTCTAGAATAGAGCCTGCCTTTGATTTCACAGCATTCTGTAAGTGGAAGTAGGATCTGAAGTGTTAGGTCAACTTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR CCA 90 bp | TTACAGAATGCTGTGAAATCAAAGGCAGGCTCTATTCTAGAGCAGTaGTTCTCAACCTCCCTTACACTCTTTAATACAGTTCCTCATGTT | + |
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Preference number: 1 (lower is better) Translates to: LQNAVKSKAGSILEQ*FSTSLTLFNTVPHV Trigger: AACATGAGGAACTGTATTAAAGAGTGTAAGGGAGGTTGAGAACCACTGCTCTAGAATAGAGCCTGCCTTTGATTTCACAGCATTCTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR CCA 90 bp | AAGAAAACACTCTTCTTTTGGGAAATGGTCTCATCTATCTCAGGCTaGCCTCAAATTTGCATGGAAGTTGACCTAACACTTCAGATCCTA | + |
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Preference number: 1 (lower is better) Translates to: KKTLFFWEMVSSISG*PQICMEVDLTLQIL Trigger: TAGGATCTGAAGTGTTAGGTCAACTTCCATGCAAATTTGAGGCCAGCCTGAGATAGATGAGACCATTTCCCAAAAGAAGAGTGTTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR GCA 90 bp | GGGTCCCAAGTATTCCGTATGAGACAACTATTAATCAATCATGTTTaGTTTAATAAGATACTGGTCGAAGGGGTCACACTGGTACATAAA | + |
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Preference number: 1 (lower is better) Translates to: GSQVFRMRQLLINHV*FNKILVEGVTLVHK Trigger: TTTATGTACCAGTGTGACCCCTTCGACCAGTATCTTATTAAAGCAAACATGATTGATTAATAGTTGTCTCATACGGAATACTTGGGACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR-3UTR CCA 90 bp | GCACTTGCCTTTAGTCACAGCACTTGGGAGGCAGAGGCCAGTAGATCTCGGAGGTCAAACAGTCTCTTTTaGCCTTCTGAGTCTAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: ALAFSHSTWEAEASRSRRSNSLF*PSESRS Trigger: AGACCTAGACTCAGAAGGCCAAAAGAGACTGTTTGA...CCTCCGAGATCTACTGGCCTCTGCCTCCCAAGTGCTGTGACTAAAGGCAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCACAGGTGGTGGTGGTACACACCTTTATTCCAGCACTTAAGAGGCAAGAGGTTTAGTCACAGCACTTaGGAGGCAGAGGCCAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: VHRWWWYTPLFQHLRGKRFSHST*EAEASR Trigger: TCTACTGGCCTCTGCCTCCCAAGTGCTGTGACTAAA...CCTCTTGCCTCTTAAGTGCTGGAATAAAGGTGTGTACCACCACCACCTGTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR CAA 90 bp | AGTTTTACAGCATTTAAATCTAAAAGGTGCAAGGTATGGTGGCACTaGCCTTTAGTCACAGCACTTGGGAGGCAGAGGCCAGTAGATCTC | + |
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Preference number: 2 (lower is better) Translates to: SFTAFKSKRCKVWWH*PLVTALGRQRPVDL Trigger: GAGATCTACTGGCCTCTGCCTCCCAAGTGCTGTGACTAAAGGCAAGTGCCACCATACCTTGCACCTTTTAGATTTAAATGCTGTAAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGCACAGGTGGTGGTGGTACACACCTTTATTCCAGCACTTAAGAGGCAAGTCTTCTTTTGGGAAATaGTCTCATCTATCTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: CVHRWWWYTPLFQHLRGKSSFGK*SHLSQA Trigger: AGCCTGAGATAGATGAGACCATTTCCCAAAAGAAGA...CTTGCCTCTTAAGTGCTGGAATAAAGGTGTGTACCACCACCACCTGTGCACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAGAAACAAATTCACTAGTATCTTCTGTGTTACTGCTGAGCATAAAGTGGTACAATCCCAGCAATTaGGGGGAAGAGGCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: QQETNSLVSSVLLLSIKWYNPSN*GEEAGG Trigger: TCCTCCTGCCTCTTCCCCTCAATTGCTGGGATTGTA...CCACTTTATGCTCAGCAGTAACACAGAAGATACTAGTGAATTTGTTTCTTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR-3UTR GCA 90 bp | ATGCAGTCAACAAGCAAGTTTGCTAGGCATGGTGGTGCATACTTACAATCCCAGTTTAAATCTAAAAGGTaGAAGGTATGGTGGCACTTG | + |
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Preference number: 2 (lower is better) Translates to: MQSTSKFARHGGAYLQSQFKSKR*KVWWHL Trigger: CAAGTGCCACCATACCTTGCACCTTTTAGATTTAAA...CTGGGATTGTAAGTATGCACCACCATGCCTAGCAAACTTGCTTGTTGACTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGTTACTGCTGAGCATAAAGTGGTACAGTATTAATGGACACCATTTTGACTCATCTATCTCAGGCTaGCCTCAAATTTGCATGGAA | + |
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Preference number: 2 (lower is better) Translates to: SVLLLSIKWYSINGHHFDSSISG*PQICME Trigger: TTCCATGCAAATTTGAGGCCAGCCTGAGATAGATGA...GTCAAAATGGTGTCCATTAATACTGTACCACTTTATGCTCAGCAGTAACACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR CCA 72 bp | CAAGGTATGGTGGCACTTGCCTTTAGTCACAGCACTTaGGAGGCAGAGGCCAGTAGATCTCGGAGGTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: QGMVALAFSHST*EAEASRSRRSR Trigger: CCTTGACCTCCGAGATCTACTGGCCTCTGCCTCCCAAGTGCTGTGACTAAAGGCAAGTGCCACCATACCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR-3UTR CAA 90 bp | GTGCACAGGTGGTGGTGGTACACACCTTTATTCCAGCACTTAAGAGGCAAGAGGAAGGTATGGTGGCACTaGCCTTTAGTCACAGCACTT | + |
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Preference number: 3 (lower is better) Translates to: VHRWWWYTPLFQHLRGKRKVWWH*PLVTAL Trigger: AAGTGCTGTGACTAAAGGCAAGTGCCACCATACCTT...CCTCTTGCCTCTTAAGTGCTGGAATAAAGGTGTGTACCACCACCACCTGTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR TCA 72 bp | TCCTGCCTCCACCTCTTAATGTTGGGATTACAGGTGTaGAACAAACGCCTAGGTAGGGTCCCAAGTATTCCG | + |
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Preference number: 3 (lower is better) Translates to: SCLHLLMLGLQV*NKRLGRVPSIP Trigger: CGGAATACTTGGGACCCTACCTAGGCGTTTGTTTCACACCTGTAATCCCAACATTAAGAGGTGGAGGCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR CCA 72 bp | TTTACAGCATTTAAATCTAAAAGGTGCAAGGTATGGTaGCACTTGCCTTTAGTCACAGCACTTGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: FTAFKSKRCKVW*HLPLVTALGRQ Trigger: CTGCCTCCCAAGTGCTGTGACTAAAGGCAAGTGCCACCATACCTTGCACCTTTTAGATTTAAATGCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR TCA 72 bp | ATCTATCTCAGGCTGGCCTCAAATTTGCATGGAAGTTaGCCTAACACTTCAGATCCTACTTCCACTTACAGA | + |
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Preference number: 3 (lower is better) Translates to: IYLRLASNLHGS*PNTSDPTSTYR Trigger: TCTGTAAGTGGAAGTAGGATCTGAAGTGTTAGGTCAACTTCCATGCAAATTTGAGGCCAGCCTGAGATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR CCA 72 bp | AGTTTTACAGCATTTAAATCTAAAAGGTGCAAGGTATaGTGGCACTTGCCTTTAGTCACAGCACTTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SFTAFKSKRCKV*WHLPLVTALGR Trigger: CCTCCCAAGTGCTGTGACTAAAGGCAAGTGCCACCATACCTTGCACCTTTTAGATTTAAATGCTGTAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR CCA 72 bp | GCTGTGAAATCAAAGGCAGGCTCTATTCTAGAGCAGTaGTTCTCAACCTCCCTTACACTCTTTAATACAGTT | + |
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Preference number: 3 (lower is better) Translates to: AVKSKAGSILEQ*FSTSLTLFNTV Trigger: AACTGTATTAAAGAGTGTAAGGGAGGTTGAGAACCACTGCTCTAGAATAGAGCCTGCCTTTGATTTCACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGTTACTGCTGAGCATAAAGTGGTACAGTATTAATGGACACCATTTTGACGGTGCCCATCTAAATTaGAGGCCAAGACTATACAGT | + |
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Preference number: 3 (lower is better) Translates to: SVLLLSIKWYSINGHHFDGAHLN*RPRLYS Trigger: ACTGTATAGTCTTGGCCTCAAATTTAGATGGGCACC...GTCAAAATGGTGTCCATTAATACTGTACCACTTTATGCTCAGCAGTAACACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR CCA 72 bp | TTTGCTTTAATAAGATACTGGTCGAAGGGGTCACACTaGTACATAAATTACATTTTCTCAGCTCCAGGACCA | + |
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Preference number: 3 (lower is better) Translates to: FALIRYWSKGSH*YINYIFSAPGP Trigger: TGGTCCTGGAGCTGAGAAAATGTAATTTATGTACCAGTGTGACCCCTTCGACCAGTATCTTATTAAAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR CCA 72 bp | TCACTAGTATCTTCTGTGTTACTGCTGAGCATAAAGTaGTACAGTATTAATGGACACCATTTTGACAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: SLVSSVLLLSIK*YSINGHHFDSG Trigger: GCCACTGTCAAAATGGTGTCCATTAATACTGTACCACTTTATGCTCAGCAGTAACACAGAAGATACTAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR GCA 72 bp | TCAGTTTGTAGTTTTACAGCATTTAAATCTAAAAGGTaGAAGGTATGGTGGCACTTGCCTTTAGTCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: SVCSFTAFKSKR*KVWWHLPLVTA Trigger: TGCTGTGACTAAAGGCAAGTGCCACCATACCTTGCACCTTTTAGATTTAAATGCTGTAAAACTACAAACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR GCA 72 bp | GTATTCCGTATGAGACAACTATTAATCAATCATGTTTaGTTTAATAAGATACTGGTCGAAGGGGTCACACTG | + |
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Preference number: 3 (lower is better) Translates to: VFRMRQLLINHV*FNKILVEGVTL Trigger: CAGTGTGACCCCTTCGACCAGTATCTTATTAAAGCAAACATGATTGATTAATAGTTGTCTCATACGGAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR TCA 72 bp | AATGAAGGATGCTATAGCAATGGAACCATGGTTATATaGCAACTAAGTAGACTTGTACACATAAACATGGGT | + |
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Preference number: 3 (lower is better) Translates to: NEGCYSNGTMVI*QLSRLVHINMG Trigger: ACCCATGTTTATGTGTACAAGTCTACTTAGTTGTCATATAACCATGGTTCCATTGCTATAGCATCCTTCATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS-3UTR GCA 90 bp | GTGCACAGGTGGTGGTGGTACACACCTTTATTCCAGCACTTAAGAGGCAAGAGGACTGCCTGCCCGGAATaGGGCCGCGGAGGAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: VHRWWWYTPLFQHLRGKRTACPE*GRGGGQ Trigger: CTGTCCTCCTCCGCGGCCGCATTCCGGGCAGGCAGT...CCTCTTGCCTCTTAAGTGCTGGAATAAAGGTGTGTACCACCACCACCTGTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS-3UTR GCA 90 bp | AAGGGGTCACACTGGTACATAAATTACATTTTCTCAGCTCCAGGACCAAGTAAGTCCCGATCCACTGCCTaGCCGGAATGCGGCCGCGGA | + |
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Preference number: 4 (lower is better) Translates to: KGSHWYINYIFSAPGPSKSRSTA*PECGRG Trigger: TCCGCGGCCGCATTCCGGGCAGGCAGTGGATCGGGA...CTTACTTGGTCCTGGAGCTGAGAAAATGTAATTTATGTACCAGTGTGACCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS-3UTR GCA 90 bp | AAGGGGTCACACTGGTACATAAATTACATTTTCTCAGCTCCAGGACCAAGTAAGTGCTTCCCGATCCACTaGCTGCCCGGAATGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KGSHWYINYIFSAPGPSKCFPIH*LPGMRP Trigger: CGGCCGCATTCCGGGCAGGCAGTGGATCGGGAAGCA...CTTACTTGGTCCTGGAGCTGAGAAAATGTAATTTATGTACCAGTGTGACCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR CAA 72 bp | GCTAGGCATGGTGGTGCATACTTACAATCCCAGCAATaGAGGGGAAGAGGCAGGAGGATCACTGACTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: ARHGGAYLQSQQ*RGRGRRITDFK Trigger: CTTGAAGTCAGTGATCCTCCTGCCTCTTCCCCTCAATTGCTGGGATTGTAAGTATGCACCACCATGCCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR CAA 72 bp | GCATTTAAATCTAAAAGGTGCAAGGTATGGTGGCACTaGCCTTTAGTCACAGCACTTGGGAGGCAGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: AFKSKRCKVWWH*PLVTALGRQRP Trigger: TGGCCTCTGCCTCCCAAGTGCTGTGACTAAAGGCAAGTGCCACCATACCTTGCACCTTTTAGATTTAAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS-3UTR TCA 90 bp | TCTGTGTTACTGCTGAGCATAAAGTGGTACAGTATTAATGGACACCATTTTGACAAGTGGCCGCTGCCTTaGTGGCTTCAAAAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SVLLLSIKWYSINGHHFDKWPLP*WLQKPG Trigger: CCCAGGCTTTTGAAGCCATCAAGGCAGCGGCCACTT...GTCAAAATGGTGTCCATTAATACTGTACCACTTTATGCTCAGCAGTAACACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS-3UTR GCA 90 bp | AACATCTTTACTTCACACGTCCACTCACAGAATCCAAATTCTAAAAGAAAACACGCCGCACTCCTGCTCTaGTGTCATGTAGGGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: NIFTSHVHSQNPNSKRKHAALLL*CHVGHA Trigger: AGCATGCCCTACATGACAGCAGAGCAGGAGTGCGGC...GTGTTTTCTTTTAGAATTTGGATTCTGTGAGTGGACGTGTGAAGTAAAGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| 3UTR CAA 72 bp | AGCACTAGGGAGACAGAGATCGGTGCCCATCTAAATTaGAGGCCAAGACTATACAGTAAGATCTGTATTAAA | + |
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Preference number: 4 (lower is better) Translates to: STRETEIGAHLN*RPRLYSKICIK Trigger: TTTAATACAGATCTTACTGTATAGTCTTGGCCTCAAATTTAGATGGGCACCGATCTCTGTCTCCCTAGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS GCA 90 bp | GCTTGGAAAGACACGGTACGCGGCCGCCGGTGCTTCCCGATCCACTaGCTGCCCGGAATGCGGCCGCGGAGGAGGACAGCGGTGAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: AWKDTVRGRRCFPIH*LPGMRPRRRTAVRN Trigger: GTTCCTCACCGCTGTCCTCCTCCGCGGCCGCATTCCGGGCAGGCAGTGGATCGGGAAGCACCGGCGGCCGCGTACCGTGTCTTTCCAAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS CCA 90 bp | TTCTCGGCCTCCACCTCCAGGCGACGGATCATGCTCTCCTTCGCTTaGAAAGACACGGTACGCGGCCGCCGGTGCTTCCCGATCCACTGC | + |
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Preference number: 5 (lower is better) Translates to: FSASTSRRRIMLSFA*KDTVRGRRCFPIHC Trigger: GCAGTGGATCGGGAAGCACCGGCGGCCGCGTACCGTGTCTTTCCAAGCGAAGGAGAGCATGATCCGTCGCCTGGAGGTGGAGGCCGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS-3UTR CAA 90 bp | AACATCTTTACTTCACACGTCCACTCACAGAATCCAAATTCTAAAAGAAAACACGAAGTGGCCGCTGCCTaGATGGCTTCAAAAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: NIFTSHVHSQNPNSKRKHEVAAA*MASKAW Trigger: CCAGGCTTTTGAAGCCATCAAGGCAGCGGCCACTTC...GTGTTTTCTTTTAGAATTTGGATTCTGTGAGTGGACGTGTGAAGTAAAGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS GCA 72 bp | GACACGGTACGCGGCCGCCGGTGCTTCCCGATCCACTaGCTGCCCGGAATGCGGCCGCGGAGGAGGACAGCG | + |
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Preference number: 6 (lower is better) Translates to: DTVRGRRCFPIH*LPGMRPRRRTA Trigger: CGCTGTCCTCCTCCGCGGCCGCATTCCGGGCAGGCAGTGGATCGGGAAGCACCGGCGGCCGCGTACCGTGTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS CCA 72 bp | TTGGAAGTGGCCGCTGCCTTGATGGCTTCAAAAGCCTaGGCCCGTCGCTCCGCGGCGTGGCCGCACTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LEVAAALMASKA*ARRSAAWPHSC Trigger: GCAGGAGTGCGGCCACGCCGCGGAGCGACGGGCCCAGGCTTTTGAAGCCATCAAGGCAGCGGCCACTTCCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS CCA 72 bp | TCCACCTCCAGGCGACGGATCATGCTCTCCTTCGCTTaGAAAGACACGGTACGCGGCCGCCGGTGCTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: STSRRRIMLSFA*KDTVRGRRCFP Trigger: CGGGAAGCACCGGCGGCCGCGTACCGTGTCTTTCCAAGCGAAGGAGAGCATGATCCGTCGCCTGGAGGTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS CAA 72 bp | CTCCACCTCCAGGCGACGGATCATGCTCTCCTTCGCTaGGAAAGACACGGTACGCGGCCGCCGGTGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LHLQATDHALLR*ERHGTRPPVLP Trigger: GGGAAGCACCGGCGGCCGCGTACCGTGTCTTTCCAAGCGAAGGAGAGCATGATCCGTCGCCTGGAGGTGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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| CDS CAA 90 bp | GTTCTCGGCCTCCACCTCCAGGCGACGGATCATGCTCTCCTTCGCTaGGAAAGACACGGTACGCGGCCGCCGGTGCTTCCCGATCCACTG | + |
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Preference number: 6 (lower is better) Translates to: VLGLHLQATDHALLR*ERHGTRPPVLPDPL Trigger: CAGTGGATCGGGAAGCACCGGCGGCCGCGTACCGTGTCTTTCCAAGCGAAGGAGAGCATGATCCGTCGCCTGGAGGTGGAGGCCGAGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022538.5 |
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