RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRPL51 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030335

Ensembl transcript IDs: ENSMUST00000032485.7

Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACTCCTCCCAACCACAATGTGTGGAGGGCCTAGCTCAGTCCCATaGAAGCTCCCTGGTGGGCAGTTCAGTTTCTGTGAGCTCCTAAGG +
Preference number: 1 (lower is better)
Translates to: GLLPTTMCGGPSSVP*KLPGGQFSFCELLR
Trigger: CCTTAGGAGCTCACAGAAACTGAACTGCCCACCAGGGAGCTTGCATGGGACTGAGCTAGGCCCTCCACACATTGTGGTTGGGAGGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CCA 90 bp AGACAAGGCACCTCTTCTATTAGGGCTGGGCAAGGCAGCCGGTTGTaGGGAAAGGGTCCTAAAGGCAGGCAGCAGAAGCAGGGGATAATC +
Preference number: 1 (lower is better)
Translates to: RQGTSSIRAGQGSRL*GKGPKGRQQKQGII
Trigger: GATTATCCCCTGCTTCTGCTGCCTGCCTTTAGGACCCTTTCCCCACAACCGGCTGCCTTGCCCAGCCCTAATAGAAGAGGTGCCTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR GCA 90 bp AGCCTTGAGTCACCATGTGTGAGCTGGGAATTAACCTGGGCAACCTaGAAGAGCATCCCTGGGAGATGGCTGGAATCATCTCTCCAGCCC +
Preference number: 1 (lower is better)
Translates to: SLESPCVSWELTWAT*KSIPGRWLESSLQP
Trigger: GGGCTGGAGAGATGATTCCAGCCATCTCCCAGGGATGCTCTTGCAGGTTGCCCAGGTTAATTCCCAGCTCACACATGGTGACTCAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR TCA 90 bp ATCTCATTATGGGTGGTTGTGAGCCACCATGTGGCTGCTGGGATTTaGACTCAGGACCTTCAGAAGAGCAGTCAGTGCCATCTCACCAGC +
Preference number: 1 (lower is better)
Translates to: ISLWVVVSHHVAAGI*TQDLQKSSQCHLTS
Trigger: GCTGGTGAGATGGCACTGACTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAGCCACATGGTGGCTCACAACCACCCATAATGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR TCA 90 bp GCCTGTCTCCATGGGAAGCCCAGAAACTGGAAGTATAGTCAGCCTTaGGTCACCATGTGTGAGCTGGGAATTAACCTGGGCAACCTGCAA +
Preference number: 1 (lower is better)
Translates to: ACLHGKPRNWKYSQP*VTMCELGINLGNLQ
Trigger: TTGCAGGTTGCCCAGGTTAATTCCCAGCTCACACATGGTGACTCAAGGCTGACTATACTTCCAGTTTCTGGGCTTCCCATGGAGACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR TCA 90 bp AATCTTGTCACTCTGGAGGTAGAGGCAGGAGGATGGGTCCCAGTTTaGGCTATAAGAGTTCCAGGCCAGCCTGAGCCTGACTTTGAGAGA +
Preference number: 1 (lower is better)
Translates to: NLVTLEVEAGGWVPV*AIRVPGQPEPDFER
Trigger: TCTCTCAAAGTCAGGCTCAGGCTGGCCTGGAACTCTTATAGCTCAAACTGGGACCCATCCTCCTGCCTCTACCTCCAGAGTGACAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR TCA 90 bp GGTGGGCAGTTCAGTTTCTGTGAGCTCCTAAGGGCTCAGGTTAGTTaGTTCTGTGGGTTTTCTTGTGATGTCCTTGACCCCTCTGGCTCC +
Preference number: 1 (lower is better)
Translates to: GGQFSFCELLRAQVS*FCGFSCDVLDPSGS
Trigger: GGAGCCAGAGGGGTCAAGGACATCACAAGAAAACCCACAGAATCAACTAACCTGAGCCCTTAGGAGCTCACAGAAACTGAACTGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CCA 90 bp CCAGAAACTGGAAGTATAGTCAGCCTTGAGTCACCATGTGTGAGCTaGGAATTAACCTGGGCAACCTGCAAGAGCATCCCTGGGAGATGG +
Preference number: 1 (lower is better)
Translates to: PETGSIVSLESPCVS*ELTWATCKSIPGRW
Trigger: CCATCTCCCAGGGATGCTCTTGCAGGTTGCCCAGGTTAATTCCCAGCTCACACATGGTGACTCAAGGCTGACTATACTTCCAGTTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CCA 90 bp AGTATAGTCAGCCTTGAGTCACCATGTGTGAGCTGGGAATTAACCTaGGCAACCTGCAAGAGCATCCCTGGGAGATGGCTGGAATCATCT +
Preference number: 1 (lower is better)
Translates to: SIVSLESPCVSWELT*ATCKSIPGRWLESS
Trigger: AGATGATTCCAGCCATCTCCCAGGGATGCTCTTGCAGGTTGCCCAGGTTAATTCCCAGCTCACACATGGTGACTCAAGGCTGACTATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR GCA 90 bp CACTTCATAAAACTGGGCATGACTCAAGGTCAGCCTCCACAAAACTaGCCTATTCAAGAGGATGGGAAATGCTGTGGTACTCAGACAAGT +
Preference number: 1 (lower is better)
Translates to: HFIKLGMTQGQPPQN*PIQEDGKCCGTQTS
Trigger: ACTTGTCTGAGTACCACAGCATTTCCCATCCTCTTGAATAGGGCAGTTTTGTGGAGGCTGACCTTGAGTCATGCCCAGTTTTATGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR GCA 90 bp CATGTTTTACATGCAATAATACATGCAGCTATGCCTGTGCACATGTaGATGCCTGTCTCCATGGGAAGCCCAGAAACTGGAAGTATAGTC +
Preference number: 1 (lower is better)
Translates to: HVLHAIIHAAMPVHM*MPVSMGSPETGSIV
Trigger: GACTATACTTCCAGTTTCTGGGCTTCCCATGGAGACAGGCATGCACATGTGCACAGGCATAGCTGCATGTATTATTGCATGTAAAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR GCA 90 bp AGTAACAAAAGATCATGTGACTTAGGAACGAGGCAGACGTCAGAGTaGATGAGTAAATGTAGCACTGGGCATATCAGATTCCAAAGGAGC +
Preference number: 1 (lower is better)
Translates to: SNKRSCDLGTRQTSE*MSKCSTGHIRFQRS
Trigger: GCTCCTTTGGAATCTGATATGCCCAGTGCTACATTTACTCATGCACTCTGACGTCTGCCTCGTTCCTAAGTCACATGATCTTTTGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CCA 90 bp AAAGTGCCAGCAATAAATGATTGTTATAAAGGCCACAAGCATAACTaGGCTGTAAGTAATAGTAACAAAAGATCATGTGACTTAGGAACG +
Preference number: 1 (lower is better)
Translates to: KVPAINDCYKGHKHN*AVSNSNKRSCDLGT
Trigger: CGTTCCTAAGTCACATGATCTTTTGTTACTATTACTTACAGCCCAGTTATGCTTGTGGCCTTTATAACAATCATTTATTGCTGGCACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CAA 90 bp GTAAGACAAGGCACCTCTTCTATTAGGGCTGGGCAAGGCAGCCGGTaGTGGGGAAAGGGTCCTAAAGGCAGGCAGCAGAAGCAGGGGATA +
Preference number: 2 (lower is better)
Translates to: VRQGTSSIRAGQGSR*WGKGPKGRQQKQGI
Trigger: TATCCCCTGCTTCTGCTGCCTGCCTTTAGGACCCTTTCCCCACAACCGGCTGCCTTGCCCAGCCCTAATAGAAGAGGTGCCTTGTCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR-3UTR TCA 90 bp AGCTGGGAATTAACCTGGGCAACCTGCAAGAGCATCCCTGGGAGATGGCTGGAACTCTGCTGCCTCAGTTaGCCTTGCTCTCTCTGGTCA +
Preference number: 2 (lower is better)
Translates to: SWELTWATCKSIPGRWLELCCLS*PCSLWS
Trigger: TGACCAGAGAGAGCAAGGTCAACTGAGGCAGCAGAG...TTCCAGCCATCTCCCAGGGATGCTCTTGCAGGTTGCCCAGGTTAATTCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR-3UTR GCA 90 bp AGCTGGGAATTAACCTGGGCAACCTGCAAGAGCATCCCTGGGAGATGGCTGGAAGAGCCACCATGTGGCTaGTGGGATTTGAACTCAGGA +
Preference number: 2 (lower is better)
Translates to: SWELTWATCKSIPGRWLEEPPCG*WDLNSG
Trigger: TCCTGAGTTCAAATCCCAGCAGCCACATGGTGGCTC...TTCCAGCCATCTCCCAGGGATGCTCTTGCAGGTTGCCCAGGTTAATTCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR-3UTR TCA 90 bp AGCTGGGAATTAACCTGGGCAACCTGCAAGAGCATCCCTGGGAGATGGCTGGAAAGACGTCAGAGTGCATaGGTAAATGTAGCACTGGGC +
Preference number: 2 (lower is better)
Translates to: SWELTWATCKSIPGRWLERRQSA*VNVALG
Trigger: GCCCAGTGCTACATTTACTCATGCACTCTGACGTCT...TTCCAGCCATCTCCCAGGGATGCTCTTGCAGGTTGCCCAGGTTAATTCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR-3UTR CCA 90 bp CCTAAAGGCAGGCAGCAGAAGCAGGGGATAATCAGAGCTCCTACTCCTGCTGTTAGCATCCCTGGGAGATaGCTGGAATCATCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: PKGRQQKQGIIRAPTPAVSIPGR*LESSLQ
Trigger: CTGGAGAGATGATTCCAGCCATCTCCCAGGGATGCT...AACAGCAGGAGTAGGAGCTCTGATTATCCCCTGCTTCTGCTGCCTGCCTTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CAA 90 bp GATCTCATTATGGGTGGTTGTGAGCCACCATGTGGCTGCTGGGATTaGAACTCAGGACCTTCAGAAGAGCAGTCAGTGCCATCTCACCAG +
Preference number: 2 (lower is better)
Translates to: DLIMGGCEPPCGCWD*NSGPSEEQSVPSHQ
Trigger: CTGGTGAGATGGCACTGACTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAGCCACATGGTGGCTCACAACCACCCATAATGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR-3UTR CCA 90 bp AGCTGGGAATTAACCTGGGCAACCTGCAAGAGCATCCCTGGGAGATGGCTGGAACGTCAGATCTCATTATaGGTGGTTGTGAGCCACCAT +
Preference number: 2 (lower is better)
Translates to: SWELTWATCKSIPGRWLERQISL*VVVSHH
Trigger: ATGGTGGCTCACAACCACCCATAATGAGATCTGACG...TTCCAGCCATCTCCCAGGGATGCTCTTGCAGGTTGCCCAGGTTAATTCCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR-3UTR GCA 90 bp CAAACTCAGAAATCCTCCTGCCTCTGTCTCCCAAGTGCTGGTTTTAAAGGCGTGCAGCCTCCACAAAACTaGCCTATTCAAGAGGATGGG +
Preference number: 2 (lower is better)
Translates to: QTQKSSCLCLPSAGFKGVQPPQN*PIQEDG
Trigger: CCCATCCTCTTGAATAGGGCAGTTTTGTGGAGGCTG...CACGCCTTTAAAACCAGCACTTGGGAGACAGAGGCAGGAGGATTTCTGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CAA 90 bp GGTTGTTGGGAATTGAATTTAGGACCTCTGCTGCCTCAGTTGACCTaGCTCTCTCTGGTCAACTCCACTTGCTCTGGTCCAATGATCAAA +
Preference number: 2 (lower is better)
Translates to: GCWELNLGPLLPQLT*LSLVNSTCSGPMIK
Trigger: TTTGATCATTGGACCAGAGCAAGTGGAGTTGACCAGAGAGAGCAAGGTCAACTGAGGCAGCAGAGGTCCTAAATTCAATTCCCAACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CAA 90 bp TGTAGCTGTACAGATGGTTGTGAGGCTTCATGTGGTTGTTGGGAATaGAATTTAGGACCTCTGCTGCCTCAGTTGACCTTGCTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: CSCTDGCEASCGCWE*NLGPLLPQLTLLSL
Trigger: CAGAGAGAGCAAGGTCAACTGAGGCAGCAGAGGTCCTAAATTCAATTCCCAACAACCACATGAAGCCTCACAACCATCTGTACAGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR-3UTR TCA 90 bp TATAGCCGAACTCAGAAATCCACCTGCTTCTGCCTCCTGAGTGCTGGGATTAAACTGTACAGATGGTTGTaGGGCTTCATGTGGTTGTTG +
Preference number: 2 (lower is better)
Translates to: YSRTQKSTCFCLLSAGIKLYRWL*GFMWLL
Trigger: CAACAACCACATGAAGCCTCACAACCATCTGTACAG...TTTAATCCCAGCACTCAGGAGGCAGAAGCAGGTGGATTTCTGAGTTCGGCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR-3UTR GCA 90 bp CAAACTCAGAAATCCTCCTGCCTCTGTCTCCCAAGTGCTGGTTTTAAAGGCGTGCAAGAGGATGGGAAATaGTGTGGTACTCAGACAAGT +
Preference number: 2 (lower is better)
Translates to: QTQKSSCLCLPSAGFKGVQEDGK*CGTQTS
Trigger: ACTTGTCTGAGTACCACAGCATTTCCCATCCTCTTG...CACGCCTTTAAAACCAGCACTTGGGAGACAGAGGCAGGAGGATTTCTGAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR-3UTR CCA 90 bp TTCCAAGAGAATCCCCAAGCTCTGCTTTGTTTGCCTGTGTGTCTCTGTAATACTCCACCATGTGGCTGCTaGGATTTGAACTCAGGACCT +
Preference number: 2 (lower is better)
Translates to: FQENPQALLCLPVCLCNTPPCGC*DLNSGP
Trigger: AGGTCCTGAGTTCAAATCCCAGCAGCCACATGGTGG...AGTATTACAGAGACACACAGGCAAACAAAGCAGAGCTTGGGGATTCTCTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR-3UTR TCA 90 bp CAAACTCAGAAATCCTCCTGCCTCTGTCTCCCAAGTGCTGGTTTTAAAGGCGTGAAAATAAGTACACTGTaGCTGACTTCAGATGCACCA +
Preference number: 2 (lower is better)
Translates to: QTQKSSCLCLPSAGFKGVKISTL*LTSDAP
Trigger: TGGTGCATCTGAAGTCAGTCACAGTGTACTTATTTT...CACGCCTTTAAAACCAGCACTTGGGAGACAGAGGCAGGAGGATTTCTGAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR-3UTR CCA 90 bp TTTTATTCTACATCCCAACCACAGCTTCCCTCTCAACCACAGCTTCCCTCCCTCTTTCCTAGTTCATTTTaGGGTGGCAGAGTCTTTAGA +
Preference number: 2 (lower is better)
Translates to: FYSTSQPQLPSQPQLPSLFPSSF*GGRVFR
Trigger: TCTAAAGACTCTGCCACCCCAAAATGAACTAGGAAA...GAGGGAGGGAAGCTGTGGTTGAGAGGGAAGCTGTGGTTGGGATGTAGAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR-3UTR GCA 90 bp TATAGCCGAACTCAGAAATCCACCTGCTTCTGCCTCCTGAGTGCTGGGATTAAAACATGCAATAATACATaGAGCTATGCCTGTGCACAT +
Preference number: 2 (lower is better)
Translates to: YSRTQKSTCFCLLSAGIKTCNNT*SYACAH
Trigger: ATGTGCACAGGCATAGCTGCATGTATTATTGCATGT...TTTAATCCCAGCACTCAGGAGGCAGAAGCAGGTGGATTTCTGAGTTCGGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CCA 72 bp ACCTCTTCTATTAGGGCTGGGCAAGGCAGCCGGTTGTaGGGAAAGGGTCCTAAAGGCAGGCAGCAGAAGCAG +
Preference number: 3 (lower is better)
Translates to: TSSIRAGQGSRL*GKGPKGRQQKQ
Trigger: CTGCTTCTGCTGCCTGCCTTTAGGACCCTTTCCCCACAACCGGCTGCCTTGCCCAGCCCTAATAGAAGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CCA 72 bp CTGGGAATTAACCTGGGCAACCTGCAAGAGCATCCCTaGGAGATGGCTGGAATCATCTCTCCAGCCCCAAGA +
Preference number: 3 (lower is better)
Translates to: LGINLGNLQEHP*EMAGIISPAPR
Trigger: TCTTGGGGCTGGAGAGATGATTCCAGCCATCTCCCAGGGATGCTCTTGCAGGTTGCCCAGGTTAATTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CCA 72 bp AGCCTTGAGTCACCATGTGTGAGCTGGGAATTAACCTaGGCAACCTGCAAGAGCATCCCTGGGAGATGGCTG +
Preference number: 3 (lower is better)
Translates to: SLESPCVSWELT*ATCKSIPGRWL
Trigger: CAGCCATCTCCCAGGGATGCTCTTGCAGGTTGCCCAGGTTAATTCCCAGCTCACACATGGTGACTCAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR GCA 72 bp TCACCATGTGTGAGCTGGGAATTAACCTGGGCAACCTaGAAGAGCATCCCTGGGAGATGGCTGGAATCATCT +
Preference number: 3 (lower is better)
Translates to: SPCVSWELTWAT*KSIPGRWLESS
Trigger: AGATGATTCCAGCCATCTCCCAGGGATGCTCTTGCAGGTTGCCCAGGTTAATTCCCAGCTCACACATGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CCA 72 bp TTCAGATGCACCAGAAGAGGGCGTCAGATCTCATTATaGGTGGTTGTGAGCCACCATGTGGCTGCTGGGATT +
Preference number: 3 (lower is better)
Translates to: FRCTRRGRQISL*VVVSHHVAAGI
Trigger: AATCCCAGCAGCCACATGGTGGCTCACAACCACCCATAATGAGATCTGACGCCCTCTTCTGGTGCATCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CCA 72 bp TCCCCAGGTCAGGCCTCAGTGGCTATCAACCAGCCATaGCATATCAAGTACAGTAAGACAAGGCACCTCTTC +
Preference number: 3 (lower is better)
Translates to: SPGQASVAINQP*HIKYSKTRHLF
Trigger: GAAGAGGTGCCTTGTCTTACTGTACTTGATATGCCATGGCTGGTTGATAGCCACTGAGGCCTGACCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR TCA 72 bp CATGGGAAGCCCAGAAACTGGAAGTATAGTCAGCCTTaGGTCACCATGTGTGAGCTGGGAATTAACCTGGGC +
Preference number: 3 (lower is better)
Translates to: HGKPRNWKYSQP*VTMCELGINLG
Trigger: GCCCAGGTTAATTCCCAGCTCACACATGGTGACTCAAGGCTGACTATACTTCCAGTTTCTGGGCTTCCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR GCA 72 bp GATCTCATTATGGGTGGTTGTGAGCCACCATGTGGCTaGTGGGATTTGAACTCAGGACCTTCAGAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: DLIMGGCEPPCG*WDLNSGPSEEQ
Trigger: CTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAGCCACATGGTGGCTCACAACCACCCATAATGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR GCA 72 bp CATGCAATAATACATGCAGCTATGCCTGTGCACATGTaGATGCCTGTCTCCATGGGAAGCCCAGAAACTGGA +
Preference number: 3 (lower is better)
Translates to: HAIIHAAMPVHM*MPVSMGSPETG
Trigger: TCCAGTTTCTGGGCTTCCCATGGAGACAGGCATGCACATGTGCACAGGCATAGCTGCATGTATTATTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR GCA 72 bp AAACTGGGCATGACTCAAGGTCAGCCTCCACAAAACTaGCCTATTCAAGAGGATGGGAAATGCTGTGGTACT +
Preference number: 3 (lower is better)
Translates to: KLGMTQGQPPQN*PIQEDGKCCGT
Trigger: AGTACCACAGCATTTCCCATCCTCTTGAATAGGGCAGTTTTGTGGAGGCTGACCTTGAGTCATGCCCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR GCA 72 bp AGATCATGTGACTTAGGAACGAGGCAGACGTCAGAGTaGATGAGTAAATGTAGCACTGGGCATATCAGATTC +
Preference number: 3 (lower is better)
Translates to: RSCDLGTRQTSE*MSKCSTGHIRF
Trigger: GAATCTGATATGCCCAGTGCTACATTTACTCATGCACTCTGACGTCTGCCTCGTTCCTAAGTCACATGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR GCA 72 bp CCTCCACAAAACTGCCCTATTCAAGAGGATGGGAAATaGTGTGGTACTCAGACAAGTTCCCTAACTTATAAC +
Preference number: 3 (lower is better)
Translates to: PPQNCPIQEDGK*CGTQTSSLTYN
Trigger: GTTATAAGTTAGGGAACTTGTCTGAGTACCACAGCATTTCCCATCCTCTTGAATAGGGCAGTTTTGTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CAA 72 bp GGCACCTCTTCTATTAGGGCTGGGCAAGGCAGCCGGTaGTGGGGAAAGGGTCCTAAAGGCAGGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GTSSIRAGQGSR*WGKGPKGRQQK
Trigger: CTTCTGCTGCCTGCCTTTAGGACCCTTTCCCCACAACCGGCTGCCTTGCCCAGCCCTAATAGAAGAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS-3UTR GCA 90 bp TATAGCCGAACTCAGAAATCCACCTGCTTCTGCCTCCTGAGTGCTGGGATTAAACCACAGTCTCCTACTTaGCGCCCAAGGGACACTCCC +
Preference number: 4 (lower is better)
Translates to: YSRTQKSTCFCLLSAGIKPQSPT*RPRDTP
Trigger: GGGAGTGTCCCTTGGGCGGCAAGTAGGAGACTGTGG...TTTAATCCCAGCACTCAGGAGGCAGAAGCAGGTGGATTTCTGAGTTCGGCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CAA 72 bp GAATTGAATTTAGGACCTCTGCTGCCTCAGTTGACCTaGCTCTCTCTGGTCAACTCCACTTGCTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ELNLGPLLPQLT*LSLVNSTCSGP
Trigger: TGGACCAGAGCAAGTGGAGTTGACCAGAGAGAGCAAGGTCAACTGAGGCAGCAGAGGTCCTAAATTCAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS-3UTR CCA 90 bp CCTAAAGGCAGGCAGCAGAAGCAGGGGATAATCAGAGCTCCTACTCCTGCTGTTCTTGATCAGTTCTTTTaGGTGCTTCTCGAAATTCCC +
Preference number: 4 (lower is better)
Translates to: PKGRQQKQGIIRAPTPAVLDQFF*VLLEIP
Trigger: GGGAATTTCGAGAAGCACCCAAAAGAACTGATCAAG...AACAGCAGGAGTAGGAGCTCTGATTATCCCCTGCTTCTGCTGCCTGCCTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS-3UTR GCA 90 bp TCTCTCAGGGAAGCCCACACTCATGCTCTCAAGTGTTTTACCTCTGAACACCTCATCAGTTCTTTTGGGTaGTTCTCGAAATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLREAHTHALKCFTSEHLISSFG*FSKFPR
Trigger: CCTGGGGAATTTCGAGAAGCACCCAAAAGAACTGAT...GAGGTGTTCAGAGGTAAAACACTTGAGAGCATGAGTGTGGGCTTCCCTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS-3UTR CCA 90 bp TCCACAAAACTGCCCTATTCAAGAGGATGGGAAATGCTGTGGTACTCAGACAAGAACCACTTTGGGAGGTaGAAGAGTGAGCCTTACGAA +
Preference number: 4 (lower is better)
Translates to: STKLPYSRGWEMLWYSDKNHFGR*KSEPYE
Trigger: TTCGTAAGGCTCACTCTTCCACCTCCCAAAGTGGTT...CTTGTCTGAGTACCACAGCATTTCCCATCCTCTTGAATAGGGCAGTTTTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS-3UTR TCA 90 bp TCCACAAAACTGCCCTATTCAAGAGGATGGGAAATGCTGTGGTACTCAGACAAGTATGCAGGTCCTCAATaGACATCCTGTTTCCCACAA +
Preference number: 4 (lower is better)
Translates to: STKLPYSRGWEMLWYSDKYAGPQ*TSCFPQ
Trigger: TTGTGGGAAACAGGATGTTCATTGAGGACCTGCATA...CTTGTCTGAGTACCACAGCATTTCCCATCCTCTTGAATAGGGCAGTTTTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS-3UTR CCA 90 bp AACACCTCTCTCATAGCCCTGATGCTCAAACCTGTATTAAAATATCTTTCTTTTGCCTCGAAGCCATACTaGGCCCTTGATCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: NTSLIALMLKPVLKYLSFASKPY*ALDQFF
Trigger: AAAGAACTGATCAAGGGCCCAGTATGGCTTCGAGGC...AAAAGAAAGATATTTTAATACAGGTTTGAGCATCAGGGCTATGAGAGAGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
3UTR CAA 72 bp GATAACCACCCTAATTTTTCTACCTTCAGAGCTCACTaGAGTCTACAAGCAATTCATTTTCTTGGATTTGCA +
Preference number: 4 (lower is better)
Translates to: DNHPNFSTFRAH*SLQAIHFLGFA
Trigger: TGCAAATCCAAGAAAATGAATTGCTTGTAGACTCAAGTGAGCTCTGAAGGTAGAAAAATTAGGGTGGTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS GCA 90 bp CCTTACGAAGGCCAACCGTGGGACGCCCAGAGAGAAGCTTCGGCATaGCGAGGGCACCCAGCCCCACAGTCTCCTACTTGCCGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: PYEGQPWDAQREASA*RGHPAPQSPTCRPR
Trigger: CCTTGGGCGGCAAGTAGGAGACTGTGGGGCTGGGTGCCCTCGGCATGCCGAAGCTTCTCTCTGGGCGTCCCACGGTTGGCCTTCGTAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS TCA 90 bp CCCTCTTCTCGTTCCAGCGATCAACCACTTTGGGAGGTGGAAGAGTaGGCCTTACGAAGGCCAACCGTGGGACGCCCAGAGAGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: PSSRSSDQPLWEVEE*ALRRPTVGRPERSF
Trigger: GAAGCTTCTCTCTGGGCGTCCCACGGTTGGCCTTCGTAAGGCTCACTCTTCCACCTCCCAAAGTGGTTGATCGCTGGAACGAGAAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS CCA 90 bp AAACAGAGCCCTCTTCTCGTTCCAGCGATCAACCACTTTGGGAGGTaGAAGAGTGAGCCTTACGAAGGCCAACCGTGGGACGCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: KQSPLLVPAINHFGR*KSEPYEGQPWDAQR
Trigger: TCTCTGGGCGTCCCACGGTTGGCCTTCGTAAGGCTCACTCTTCCACCTCCCAAAGTGGTTGATCGCTGGAACGAGAAGAGGGCTCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS-3UTR CAA 90 bp AGGACCTTCAGAAGAGCAGTCAGTGCCATCTCACCAGCCCTAAAATATCTTTCTCAGCGATCAACCACTTaGGGAGGTGGAAGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: RTFRRAVSAISPALKYLSQRSTT*GGGRVS
Trigger: GCTCACTCTTCCACCTCCCAAAGTGGTTGATCGCTG...AGAAAGATATTTTAGGGCTGGTGAGATGGCACTGACTGCTCTTCTGAAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS-3UTR CAA 90 bp TTCCAAGAGAATCCCCAAGCTCTGCTTTGTTTGCCTGTGTGTCTCTGTAATACTAGCCATACTGGGCCCTaGATCAGTTCTTTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: FQENPQALLCLPVCLCNTSHTGP*ISSFGC
Trigger: GCACCCAAAAGAACTGATCAAGGGCCCAGTATGGCT...AGTATTACAGAGACACACAGGCAAACAAAGCAGAGCTTGGGGATTCTCTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS GCA 72 bp GGCCAACCGTGGGACGCCCAGAGAGAAGCTTCGGCATaGCGAGGGCACCCAGCCCCACAGTCTCCTACTTGC +
Preference number: 6 (lower is better)
Translates to: GQPWDAQREASA*RGHPAPQSPTC
Trigger: GCAAGTAGGAGACTGTGGGGCTGGGTGCCCTCGGCATGCCGAAGCTTCTCTCTGGGCGTCCCACGGTTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS TCA 72 bp CGTTCCAGCGATCAACCACTTTGGGAGGTGGAAGAGTaGGCCTTACGAAGGCCAACCGTGGGACGCCCAGAG +
Preference number: 6 (lower is better)
Translates to: RSSDQPLWEVEE*ALRRPTVGRPE
Trigger: CTCTGGGCGTCCCACGGTTGGCCTTCGTAAGGCTCACTCTTCCACCTCCCAAAGTGGTTGATCGCTGGAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS CCA 72 bp CCTCTTCTCGTTCCAGCGATCAACCACTTTGGGAGGTaGAAGAGTGAGCCTTACGAAGGCCAACCGTGGGAC +
Preference number: 6 (lower is better)
Translates to: PLLVPAINHFGR*KSEPYEGQPWD
Trigger: GTCCCACGGTTGGCCTTCGTAAGGCTCACTCTTCCACCTCCCAAAGTGGTTGATCGCTGGAACGAGAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS CAA 72 bp AACAGAGCCCTCTTCTCGTTCCAGCGATCAACCACTTaGGGAGGTGGAAGAGTGAGCCTTACGAAGGCCAAC +
Preference number: 6 (lower is better)
Translates to: NRALFSFQRSTT*GGGRVSLTKAN
Trigger: GTTGGCCTTCGTAAGGCTCACTCTTCCACCTCCCAAAGTGGTTGATCGCTGGAACGAGAAGAGGGCTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7
CDS GCA 72 bp CGAAGCCATACTGGGCCCTTGATCAGTTCTTTTGGGTaGTTCTCGAAATTCCCCAGGATTCCAATGTTGTCG +
Preference number: 6 (lower is better)
Translates to: RSHTGPLISSFG*FSKFPRIPMLS
Trigger: CGACAACATTGGAATCCTGGGGAATTTCGAGAAGCACCCAAAAGAACTGATCAAGGGCCCAGTATGGCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032485.7