Pregenerated sensors for MRPL49 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007338Ensembl transcript IDs: ENSMUST00000007482.8, ENSMUST00000235520.2, ENSMUST00000236412.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACTCAAATCCACCTCCTCTCTGGAGGCCAGTCTGTCGCGAGCACTaGCACAGGGCTGACCATCAGGCCTCAGAAGCCTTTCTCAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: DSNPPPLWRPVCREH*HRADHQASEAFLKK Trigger: CTTCTTGAGAAAGGCTTCTGAGGCCTGATGGTCAGCCCTGTGGCAGTGCTCGCGACAGACTGGCCTCCAGAGAGGAGGTGGATTTGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235520.2 |
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| 3UTR TCA 90 bp | CACGCCCGGCCTATAGCAGGAGCTCTAGGTCAAGGATTGATTCCTTaGTGGGTCTATGCTGTGAAGCCTCCAGAACAGGGTTGGGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: HARPIAGALGQGLIP*WVYAVKPPEQGWVV Trigger: GACCACCCAACCCTGTTCTGGAGGCTTCACAGCATAGACCCATCAAGGAATCAATCCTTGACCTAGAGCTCCTGCTATAGGCCGGGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CCA 90 bp | GTGGTTCCTGGGATGAGGGTGCTGAGATCAGCAACTAGAGAGCACTaGGAGGTTGCTACCGCTAGCTACCTTAGGTCTGAGGTCACACAG | + |
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Preference number: 1 (lower is better) Translates to: VVPGMRVLRSATREH*EVATASYLRSEVTQ Trigger: CTGTGTGACCTCAGACCTAAGGTAGCTAGCGGTAGCAACCTCCCAGTGCTCTCTAGTTGCTGATCTCAGCACCCTCATCCCAGGAACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007482.8 |
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| 3UTR TCA 90 bp | TTCCTCTCCTCAGTTTGCTACATCCTGCTTCCTCCAAGTCCAGGGTaGATCTCCCTGTCAGATGTCCCGCCTTCTAGTCCTGCCTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: FLSSVCYILLPPSPG*ISLSDVPPSSPASA Trigger: AGCTGAGGCAGGACTAGAAGGCGGGACATCTGACAGGGAGATTCACCCTGGACTTGGAGGAAGCAGGATGTAGCAAACTGAGGAGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR GCA 90 bp | TATAGCAGGAGCTCTAGGTCAAGGATTGATTCCTTGATGGGTCTATaGTGTGAAGCCTCCAGAACAGGGTTGGGTGGTCGCTTCCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: YSRSSRSRIDSLMGL*CEASRTGLGGRFQN Trigger: GTTCTGGAAGCGACCACCCAACCCTGTTCTGGAGGCTTCACAGCATAGACCCATCAAGGAATCAATCCTTGACCTAGAGCTCCTGCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR TCA 90 bp | CCGCCTTCTAGTCCTGCCTCAGCTCACTGGCCATCAGCTTTTGATTaGCAGGGGATGCTTCCACACAATGCACAAGAGATTATCTATACA | + |
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Preference number: 1 (lower is better) Translates to: PPSSPASAHWPSAFD*QGMLPHNAQEIIYT Trigger: TGTATAGATAATCTCTTGTGCATTGTGTGGAAGCATCCCCTGTCAATCAAAAGCTGATGGCCAGTGAGCTGAGGCAGGACTAGAAGGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR GCA 90 bp | AACCTAAGATATTGCTTGTCTCATCCACTCCCGTCCATGTCTTTTTaGTGTACTGTCTTCTGTTCCATAGCTTCCACCACGCCCGGCCTA | + |
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Preference number: 1 (lower is better) Translates to: NLRYCLSHPLPSMSF*CTVFCSIASTTPGL Trigger: TAGGCCGGGCGTGGTGGAAGCTATGGAACAGAAGACAGTACAGCAAAAAGACATGGACGGGAGTGGATGAGACAAGCAATATCTTAGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CCA 90 bp | AGCTTGATTGTTGCTATGGCCTCCCATGTTGGGACAGCTCTCAAGTaGACACATGGACACACAGGTCTACTTGTACTTTATGAAAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: SLIVAMASHVGTALK*THGHTGLLVLYESK Trigger: CTTGCTTTCATAAAGTACAAGTAGACCTGTGTGTCCATGTGTCCACTTGAGAGCTGTCCCAACATGGGAGGCCATAGCAACAATCAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR GCA 90 bp | GTCCTGCCTCAGCTCACTGGCCATCAGCTTTTGATTGACAGGGGATaGTTCCACACAATGCACAAGAGATTATCTATACAGCAGTTAATA | + |
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Preference number: 1 (lower is better) Translates to: VLPQLTGHQLLIDRG*FHTMHKRLSIQQLI Trigger: TATTAACTGCTGTATAGATAATCTCTTGTGCATTGTGTGGAAGCATCCCCTGTCAATCAAAAGCTGATGGCCAGTGAGCTGAGGCAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR-3UTR TCA 90 bp | GCTACATCCTGCTTCCTCCAAGTCCAGGGTGAATCTCCCTGTCAGATGTCCCGCGCACTGCCACAGGGCTaGCCATCAGGCCTCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: ATSCFLQVQGESPCQMSRALPQG*PSGLRS Trigger: GCTTCTGAGGCCTGATGGTCAGCCCTGTGGCAGTGC...GCGGGACATCTGACAGGGAGATTCACCCTGGACTTGGAGGAAGCAGGATGTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235520.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCACCTCCTCTCTGGAGGCCAGTCTGTCGCGAGCACTGCCACAGGGCTGACCTCTCAAGTGGACACATaGACACACAGGTCTACTTGT | + |
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Preference number: 2 (lower is better) Translates to: IHLLSGGQSVASTATGLTSQVDT*THRSTC Trigger: ACAAGTAGACCTGTGTGTCCATGTGTCCACTTGAGA...GGTCAGCCCTGTGGCAGTGCTCGCGACAGACTGGCCTCCAGAGAGGAGGTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CAA 90 bp | CCACGCCCGGCCTATAGCAGGAGCTCTAGGTCAAGGATTGATTCCTaGATGGGTCTATGCTGTGAAGCCTCCAGAACAGGGTTGGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: PRPAYSRSSRSRIDS*MGLCCEASRTGLGG Trigger: ACCACCCAACCCTGTTCTGGAGGCTTCACAGCATAGACCCATCAAGGAATCAATCCTTGACCTAGAGCTCCTGCTATAGGCCGGGCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGTTGGACATGTGGCTGGTGAGGTGGGCGCCAGAAGTGAAAGGTCTGCATGTCACCTCATTAACCTaGGTGATAGGTGTCTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GGLDMWLVRWAPEVKGLHVTSLT*VIGVFP Trigger: GGGAAAGACACCTATCACCCAGGTTAATGAGGTGAC...ATGCAGACCTTTCACTTCTGGCGCCCACCTCACCAGCCACATGTCCAACCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235520.2 |
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| 3UTR-3UTR TCA 90 bp | CTACATCCTGCTTCCTCCAAGTCCAGGGTGAATCTCCCTGTCAGATGTCCCGCCCTGCTTTTGATAGCTTaGTTGTTGCTATGGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LHPASSKSRVNLPVRCPALLLIA*LLLWPP Trigger: GGGAGGCCATAGCAACAATCAAGCTATCAAAAGCAG...GGCGGGACATCTGACAGGGAGATTCACCCTGGACTTGGAGGAAGCAGGATGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR-3UTR CCA 90 bp | GATTTTTGTATCCCATTCCAGAGACTCAAATCCACCTCCTCTCTGGAGGCCAGTAATCCACCTCCTCTCTaGAGGCCAGTCTGTCGCGAG | + |
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Preference number: 2 (lower is better) Translates to: DFCIPFQRLKSTSSLEASNPPPL*RPVCRE Trigger: CTCGCGACAGACTGGCCTCCAGAGAGGAGGTGGATT...ACTGGCCTCCAGAGAGGAGGTGGATTTGAGTCTCTGGAATGGGATACAAAAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CAA 90 bp | ATGTCCCGCCTTCTAGTCCTGCCTCAGCTCACTGGCCATCAGCTTTaGATTGACAGGGGATGCTTCCACACAATGCACAAGAGATTATCT | + |
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Preference number: 2 (lower is better) Translates to: MSRLLVLPQLTGHQL*IDRGCFHTMHKRLS Trigger: AGATAATCTCTTGTGCATTGTGTGGAAGCATCCCCTGTCAATCAAAAGCTGATGGCCAGTGAGCTGAGGCAGGACTAGAAGGCGGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CAA 90 bp | GAACCTAAGATATTGCTTGTCTCATCCACTCCCGTCCATGTCTTTTaGCTGTACTGTCTTCTGTTCCATAGCTTCCACCACGCCCGGCCT | + |
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Preference number: 2 (lower is better) Translates to: EPKILLVSSTPVHVF*LYCLLFHSFHHARP Trigger: AGGCCGGGCGTGGTGGAAGCTATGGAACAGAAGACAGTACAGCAAAAAGACATGGACGGGAGTGGATGAGACAAGCAATATCTTAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CAA 90 bp | GGTTCTGAACACCGTTTAACATTGTTTAGCCAGTTTAATGGTGGGTaGGACATGTGGCTGGTGAGGTGGGCGCCAGAAGTGAAAGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: GSEHRLTLFSQFNGG*DMWLVRWAPEVKGL Trigger: CAGACCTTTCACTTCTGGCGCCCACCTCACCAGCCACATGTCCAACCCACCATTAAACTGGCTAAACAATGTTAAACGGTGTTCAGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007482.8 |
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| 3UTR-3UTR TCA 90 bp | CATAACCCATTTAACCCATTTAAACGAGACTACGCCTGCCACATGGCTGGTGAGCTGGCCATCAGCTTTTaGTTGACAGGGGATGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: HNPFNPFKRDYACHMAGELAISF*LTGDAS Trigger: GGAAGCATCCCCTGTCAATCAAAAGCTGATGGCCAG...CTCACCAGCCATGTGGCAGGCGTAGTCTCGTTTAAATGGGTTAAATGGGTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCTCAAGTGGACACATGGACACACAGGTCTACTTGTACTTTATGAAAGCAAATCCACCTCCTCTCTaGAGGCCAGTCTGTCGCGAG | + |
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Preference number: 2 (lower is better) Translates to: QLSSGHMDTQVYLYFMKANPPPL*RPVCRE Trigger: CTCGCGACAGACTGGCCTCCAGAGAGGAGGTGGATT...TGCTTTCATAAAGTACAAGTAGACCTGTGTGTCCATGTGTCCACTTGAGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATTTTGTCTTCACACCCCTGTATAGTTGATTACAGGTCACAGGGTGATTCCCCTCCAAGTCCAGGGTaGATCTCCCTGTCAGATGTC | + |
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Preference number: 2 (lower is better) Translates to: CILSSHPCIVDYRSQGDSPPSPG*ISLSDV Trigger: GACATCTGACAGGGAGATTCACCCTGGACTTGGAGG...GGAATCACCCTGTGACCTGTAATCAACTATACAGGGGTGTGAAGACAAAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGAACAGGGTTGGGTGGTCGCTTCCAGAACAGCAAACAATAGGAAATGTACAGTTTGCTACATCCTaGTTCCTCCAAGTCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LQNRVGWSLPEQQTIGNVQFATS*FLQVQG Trigger: ACCCTGGACTTGGAGGAAGCAGGATGTAGCAAACTG...TACATTTCCTATTGTTTGCTGTTCTGGAAGCGACCACCCAACCCTGTTCTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CAA 90 bp | ATGTTGGGACAGCTCTCAAGTGGACACATGGACACACAGGTCTACTaGTACTTTATGAAAGCAAGGCCTTATCTCAAAGCCCTTTCATCC | + |
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Preference number: 2 (lower is better) Translates to: MLGQLSSGHMDTQVY*YFMKARPYLKALSS Trigger: GGATGAAAGGGCTTTGAGATAAGGCCTTGCTTTCATAAAGTACAAGTAGACCTGTGTGTCCATGTGTCCACTTGAGAGCTGTCCCAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCCACTAGTTCATAACCCATTTAACCCATTTAAACGAGACTACGCCTGCCACCATCAAAGTAGCCCTTaGTTCGAAGAGTACCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: LPLVHNPFNPFKRDYACHHQSSP*FEEYLS Trigger: TGACAGGTACTCTTCGAATCAAGGGCTACTTTGATG...GTGGCAGGCGTAGTCTCGTTTAAATGGGTTAAATGGGTTATGAACTAGTGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235520.2 |
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| 3UTR-3UTR CCA 90 bp | AATCTCAGGCTTTTCCACTGGTGCTCAGCCCAGTTCCTGAATTATGACTTACAGTCTCAAGTGGACACATaGACACACAGGTCTACTTGT | + |
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Preference number: 2 (lower is better) Translates to: NLRLFHWCSAQFLNYDLQSQVDT*THRSTC Trigger: ACAAGTAGACCTGTGTGTCCATGTGTCCACTTGAGA...CTGTAAGTCATAATTCAGGAACTGGGCTGAGCACCAGTGGAAAAGCCTGAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGGTTGGGTGGTCGCTTCCAGAACAGCAAACAATAGGAAATGTATTAAGTTTCTGCTTTTGATAGCTTaGTTGTTGCTATGGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: QGWVVASRTANNRKCIKFLLLIA*LLLWPP Trigger: GGGAGGCCATAGCAACAATCAAGCTATCAAAAGCAG...AAACTTAATACATTTCCTATTGTTTGCTGTTCTGGAAGCGACCACCCAACCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCCACTAGTTCATAACCCATTTAACCCATTTAAACGAGACTACGCCTGCCACTCTACTTGTACTTTATaGAAGCAAGGCCTTATCTCA | + |
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Preference number: 2 (lower is better) Translates to: LPLVHNPFNPFKRDYACHSTCTL*KQGLIS Trigger: TGAGATAAGGCCTTGCTTTCATAAAGTACAAGTAGA...GTGGCAGGCGTAGTCTCGTTTAAATGGGTTAAATGGGTTATGAACTAGTGGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAACAGGGTTGGGTGGTCGCTTCCAGAACAGCAAACAATAGGAAATGTATTGATGCTTCCACACAATaGACAAGAGATTATCTATAC | + |
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Preference number: 2 (lower is better) Translates to: PEQGWVVASRTANNRKCIDASTQ*TRDYLY Trigger: GTATAGATAATCTCTTGTGCATTGTGTGGAAGCATC...AATACATTTCCTATTGTTTGCTGTTCTGGAAGCGACCACCCAACCCTGTTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR GCA 72 bp | CCACCTCCTCTCTGGAGGCCAGTCTGTCGCGAGCACTaGCACAGGGCTGACCATCAGGCCTCAGAAGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: PPPLWRPVCREH*HRADHQASEAF Trigger: AAAGGCTTCTGAGGCCTGATGGTCAGCCCTGTGGCAGTGCTCGCGACAGACTGGCCTCCAGAGAGGAGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235520.2 |
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| 3UTR TCA 72 bp | CTGGAGGCCAGTCTGTCGCGAGCACTGCCACAGGGCTaGCCATCAGGCCTCAGAAGCCTTTCTCAAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: LEASLSRALPQG*PSGLRSLSQEA Trigger: GGCTTCTTGAGAAAGGCTTCTGAGGCCTGATGGTCAGCCCTGTGGCAGTGCTCGCGACAGACTGGCCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235520.2 |
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| 3UTR CCA 72 bp | GTATCCCATTCCAGAGACTCAAATCCACCTCCTCTCTaGAGGCCAGTCTGTCGCGAGCACTGCCACAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: VSHSRDSNPPPL*RPVCREHCHRA Trigger: AGCCCTGTGGCAGTGCTCGCGACAGACTGGCCTCCAGAGAGGAGGTGGATTTGAGTCTCTGGAATGGGATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CCA 72 bp | GGGATGAGGGTGCTGAGATCAGCAACTAGAGAGCACTaGGAGGTTGCTACCGCTAGCTACCTTAGGTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: GMRVLRSATREH*EVATASYLRSE Trigger: CTCAGACCTAAGGTAGCTAGCGGTAGCAACCTCCCAGTGCTCTCTAGTTGCTGATCTCAGCACCCTCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007482.8 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGTTTAATGGTGGGTTGGACATGTGGCTGGTGAGGTGGGCGCCAGAAGTGCCCGTCCATGTCTTTTaGCTGTACTGTCTTCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: SQFNGGLDMWLVRWAPEVPVHVF*LYCLLF Trigger: GAACAGAAGACAGTACAGCAAAAAGACATGGACGGG...CACTTCTGGCGCCCACCTCACCAGCCACATGTCCAACCCACCATTAAACTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR TCA 72 bp | TCAGTTTGCTACATCCTGCTTCCTCCAAGTCCAGGGTaGATCTCCCTGTCAGATGTCCCGCCTTCTAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: SVCYILLPPSPG*ISLSDVPPSSP Trigger: AGGACTAGAAGGCGGGACATCTGACAGGGAGATTCACCCTGGACTTGGAGGAAGCAGGATGTAGCAAACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CCA 72 bp | ACATTGTTTAGCCAGTTTAATGGTGGGTTGGACATGTaGCTGGTGAGGTGGGCGCCAGAAGTGAAAGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: TLFSQFNGGLDM*LVRWAPEVKGL Trigger: CAGACCTTTCACTTCTGGCGCCCACCTCACCAGCCACATGTCCAACCCACCATTAAACTGGCTAAACAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007482.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGGACATGTGGCTGGTGAGGTGGGCGCCAGAAGTGAAAGGTCTGCATTTTGTTCAGAACCTAAGATATaGCTTGTCTCATCCACTCCC | + |
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Preference number: 3 (lower is better) Translates to: VGHVAGEVGARSERSAFCSEPKI*LVSSTP Trigger: GGGAGTGGATGAGACAAGCAATATCTTAGGTTCTGA...ACAAAATGCAGACCTTTCACTTCTGGCGCCCACCTCACCAGCCACATGTCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR TCA 72 bp | AGTCCTGCCTCAGCTCACTGGCCATCAGCTTTTGATTaGCAGGGGATGCTTCCACACAATGCACAAGAGATT | + |
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Preference number: 3 (lower is better) Translates to: SPASAHWPSAFD*QGMLPHNAQEI Trigger: AATCTCTTGTGCATTGTGTGGAAGCATCCCCTGTCAATCAAAAGCTGATGGCCAGTGAGCTGAGGCAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CCA 72 bp | GTTGCTATGGCCTCCCATGTTGGGACAGCTCTCAAGTaGACACATGGACACACAGGTCTACTTGTACTTTAT | + |
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Preference number: 3 (lower is better) Translates to: VAMASHVGTALK*THGHTGLLVLY Trigger: ATAAAGTACAAGTAGACCTGTGTGTCCATGTGTCCACTTGAGAGCTGTCCCAACATGGGAGGCCATAGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR GCA 72 bp | CATAACCCATTTAACCCATTTAAACGAGACTACGCCTaGCACATGGCTGGTGAGTTTCCTCTCCTCAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: HNPFNPFKRDYA*HMAGEFPLLSL Trigger: CAAACTGAGGAGAGGAAACTCACCAGCCATGTGGCAGGCGTAGTCTCGTTTAAATGGGTTAAATGGGTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR GCA 72 bp | TATTGCTTGTCTCATCCACTCCCGTCCATGTCTTTTTaGTGTACTGTCTTCTGTTCCATAGCTTCCACCACG | + |
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Preference number: 3 (lower is better) Translates to: YCLSHPLPSMSF*CTVFCSIASTT Trigger: CGTGGTGGAAGCTATGGAACAGAAGACAGTACAGCAAAAAGACATGGACGGGAGTGGATGAGACAAGCAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR TCA 72 bp | GCTTTTCCACTGGTGCTCAGCCCAGTTCCTGAATTATaGCTTACAGGCGCATTTGTATGTGCAATGCTTATG | + |
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Preference number: 3 (lower is better) Translates to: AFPLVLSPVPEL*LTGAFVCAMLM Trigger: CATAAGCATTGCACATACAAATGCGCCTGTAAGTCATAATTCAGGAACTGGGCTGAGCACCAGTGGAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR TCA 72 bp | ATCTCAGGCTTTTCCACTGGTGCTCAGCCCAGTTCCTaGATTATGACTTACAGGCGCATTTGTATGTGCAAT | + |
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Preference number: 3 (lower is better) Translates to: ISGFSTGAQPSS*IMTYRRICMCN Trigger: ATTGCACATACAAATGCGCCTGTAAGTCATAATTCAGGAACTGGGCTGAGCACCAGTGGAAAAGCCTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR GCA 72 bp | CAGCTCACTGGCCATCAGCTTTTGATTGACAGGGGATaGTTCCACACAATGCACAAGAGATTATCTATACAG | + |
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Preference number: 3 (lower is better) Translates to: QLTGHQLLIDRG*FHTMHKRLSIQ Trigger: CTGTATAGATAATCTCTTGTGCATTGTGTGGAAGCATCCCCTGTCAATCAAAAGCTGATGGCCAGTGAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGAACAGGGTTGGGTGGTCGCTTCCAGAACAGCAAACAATAGGAAATGTATTTCAAGGATTGATTCCTaGATGGGTCTATGCTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: PEQGWVVASRTANNRKCISRIDS*MGLCCE Trigger: TTCACAGCATAGACCCATCAAGGAATCAATCCTTGA...AATACATTTCCTATTGTTTGCTGTTCTGGAAGCGACCACCCAACCCTGTTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| CDS-3UTR CCA 90 bp | TCCAGAGACTCAAATCCACCTCCTCTCTGGAGGCCAGTCTGTCGCGAGCACTGCCAAAGTAGGGCAAGCTaGGAAGAGGATCAGCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: SRDSNPPPLWRPVCREHCQSRAS*EEDQLP Trigger: CGGAAGCTGATCCTCTTCCCAGCTTGCCCTACTTTG...GCAGTGCTCGCGACAGACTGGCCTCCAGAGAGGAGGTGGATTTGAGTCTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235520.2 |
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| CDS-3UTR CCA 90 bp | GACATGTGGCTGGTGAGGTGGGCGCCAGAAGTGAAAGGTCTGCATTTTGTCTTCGTCACCTCATTAACCTaGGTGATAGGTGTCTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: DMWLVRWAPEVKGLHFVFVTSLT*VIGVFP Trigger: GGGAAAGACACCTATCACCCAGGTTAATGAGGTGAC...GAAGACAAAATGCAGACCTTTCACTTCTGGCGCCCACCTCACCAGCCACATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007482.8 |
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| 3UTR CAA 72 bp | CTTCTAGTCCTGCCTCAGCTCACTGGCCATCAGCTTTaGATTGACAGGGGATGCTTCCACACAATGCACAAG | + |
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Preference number: 4 (lower is better) Translates to: LLVLPQLTGHQL*IDRGCFHTMHK Trigger: CTTGTGCATTGTGTGGAAGCATCCCCTGTCAATCAAAAGCTGATGGCCAGTGAGCTGAGGCAGGACTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CAA 72 bp | GCCTATAGCAGGAGCTCTAGGTCAAGGATTGATTCCTaGATGGGTCTATGCTGTGAAGCCTCCAGAACAGGG | + |
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Preference number: 4 (lower is better) Translates to: AYSRSSRSRIDS*MGLCCEASRTG Trigger: CCCTGTTCTGGAGGCTTCACAGCATAGACCCATCAAGGAATCAATCCTTGACCTAGAGCTCCTGCTATAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CAA 72 bp | CACCGTTTAACATTGTTTAGCCAGTTTAATGGTGGGTaGGACATGTGGCTGGTGAGGTGGGCGCCAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: HRLTLFSQFNGG*DMWLVRWAPEV Trigger: CACTTCTGGCGCCCACCTCACCAGCCACATGTCCAACCCACCATTAAACTGGCTAAACAATGTTAAACGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007482.8 |
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| CDS-3UTR CCA 90 bp | GACATGTGGCTGGTGAGGTGGGCGCCAGAAGTGAAAGGTCTGCATTTTGTCTTCATGTTTATGTTTTGGTaGCTCTGGGATTTTGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: DMWLVRWAPEVKGLHFVFMFMFW*LWDFGR Trigger: CCTACCAAAATCCCAGAGCCACCAAAACATAAACAT...GAAGACAAAATGCAGACCTTTCACTTCTGGCGCCCACCTCACCAGCCACATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007482.8 |
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| 3UTR CAA 72 bp | CAGCTCTCAAGTGGACACATGGACACACAGGTCTACTaGTACTTTATGAAAGCAAGGCCTTATCTCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: QLSSGHMDTQVY*YFMKARPYLKA Trigger: GGCTTTGAGATAAGGCCTTGCTTTCATAAAGTACAAGTAGACCTGTGTGTCCATGTGTCCACTTGAGAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| 3UTR CAA 72 bp | CAACCCTACCTAGTACAGCACTCAGAACCTAAGATATaGCTTGTCTCATCCACTCCCGTCCATGTCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: QPYLVQHSEPKI*LVSSTPVHVFL Trigger: CAAAAAGACATGGACGGGAGTGGATGAGACAAGCAATATCTTAGGTTCTGAGTGCTGTACTAGGTAGGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| CDS-3UTR TCA 90 bp | ATCTCAAAGCCCTTTCATCCTAAGTACTTAAGCCCTGATTTTTGTATCCCATTCCATCAAAGTAGCCCTTaGTTCGAAGAGTACCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: ISKPFHPKYLSPDFCIPFHQSSP*FEEYLS Trigger: TGACAGGTACTCTTCGAATCAAGGGCTACTTTGATG...GAATGGGATACAAAAATCAGGGCTTAAGTACTTAGGATGAAAGGGCTTTGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007482.8 |
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| 3UTR CAA 72 bp | TTATCTATACAGCAGTTAATATCTGCTTTTGATAGCTaGATTGTTGCTATGGCCTCCCATGTTGGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: LSIQQLISAFDS*IVAMASHVGTA Trigger: AGCTGTCCCAACATGGGAGGCCATAGCAACAATCAAGCTATCAAAAGCAGATATTAACTGCTGTATAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000235520.2 |
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| CDS CCA 90 bp | CAGGAATATTGTGCATCCGAGAGCGACGAACAAAGTAGGGCAAGCTaGGAAGAGGATCAGCTTCCGTCGCCCGTAGCTCCGACCGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: QEYCASESDEQSRAS*EEDQLPSPVAPTEA Trigger: TGCCTCGGTCGGAGCTACGGGCGACGGAAGCTGATCCTCTTCCCAGCTTGCCCTACTTTGTTCGTCGCTCTCGGATGCACAATATTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235520.2 |
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| CDS-3UTR CAA 90 bp | CCAGAGACTCAAATCCACCTCCTCTCTGGAGGCCAGTCTGTCGCGAGCACTGCCCAGGCGCTCCACAAATaGGTATTCATCCACAGACTC | + |
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Preference number: 5 (lower is better) Translates to: PETQIHLLSGGQSVASTAQALHK*VFIHRL Trigger: GAGTCTGTGGATGAATACCAATTTGTGGAGCGCCTG...GGCAGTGCTCGCGACAGACTGGCCTCCAGAGAGGAGGTGGATTTGAGTCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007482.8 |
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| CDS-3UTR CAA 90 bp | CCTAAGAATGGACCGGCCTGTGGTTCCTGGGATGAGGGTGCTGAGATCAGCAACGGTAATGTTTATGTTTaGGTGGCTCTGGGATTTTGG | + |
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Preference number: 5 (lower is better) Translates to: PKNGPACGSWDEGAEISNGNVYV*VALGFW Trigger: CCAAAATCCCAGAGCCACCAAAACATAAACATTACC...GTTGCTGATCTCAGCACCCTCATCCCAGGAACCACAGGCCGGTCCATTCTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007482.8 |
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| CDS TCA 90 bp | CACCTTCCACTTTCCGAATCAAGGTCATCTGTCGGTTGCCGTGTGTaGTCTCCTTGTAGACAGGAATATTGTGCATCCGAGAGCGACGAA | + |
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Preference number: 5 (lower is better) Translates to: HLPLSESRSSVGCRV*SPCRQEYCASESDE Trigger: TTCGTCGCTCTCGGATGCACAATATTCCTGTCTACAAGGAGATCACACACGGCAACCGACAGATGACCTTGATTCGGAAAGTGGAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000236412.2 |
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| CDS CCA 72 bp | TGTGCATCCGAGAGCGACGAACAAAGTAGGGCAAGCTaGGAAGAGGATCAGCTTCCGTCGCCCGTAGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: CASESDEQSRAS*EEDQLPSPVAP Trigger: CGGAGCTACGGGCGACGGAAGCTGATCCTCTTCCCAGCTTGCCCTACTTTGTTCGTCGCTCTCGGATGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235520.2 |
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| CDS CCA 72 bp | CCAGTTTCCAATCACAGGACCCCATGCCTTCATCCCTaGAAGATTCGGGTACACACCCAAGCCACTTACCCA | + |
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Preference number: 6 (lower is better) Translates to: PVSNHRTPCLHP*KIRVHTQATYP Trigger: TGGGTAAGTGGCTTGGGTGTGTACCCGAATCTTCCAGGGATGAAGGCATGGGGTCCTGTGATTGGAAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236412.2 |
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| CDS TCA 72 bp | CTTTCCGAATCAAGGTCATCTGTCGGTTGCCGTGTGTaGTCTCCTTGTAGACAGGAATATTGTGCATCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LSESRSSVGCRV*SPCRQEYCASE Trigger: CTCGGATGCACAATATTCCTGTCTACAAGGAGATCACACACGGCAACCGACAGATGACCTTGATTCGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007482.8 ENSMUST00000236412.2 |
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