Pregenerated sensors for MRPL47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037531Ensembl transcript IDs: ENSMUST00000043966.8
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCAGGCTGGCCTCCGACTTGGAGCCGTCTTGCCTGAGCCTGAGTaGTGGGACTACAGGTCTACACCACTGCACTTGGCTCTGTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: PQAGLRLGAVLPEPE*WDYRSTPLHLALLG Trigger: ACCCAACAGAGCCAAGTGCAGTGGTGTAGACCTGTAGTCCCAGCACTCAGGCTCAGGCAAGACGGCTCCAAGTCGGAGGCCAGCCTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CCA 90 bp | CAGGCTGGCCTCCGACTTGGAGCCGTCTTGCCTGAGCCTGAGTGCTaGGACTACAGGTCTACACCACTGCACTTGGCTCTGTTGGGTACA | + |
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Preference number: 1 (lower is better) Translates to: QAGLRLGAVLPEPEC*DYRSTPLHLALLGT Trigger: TGTACCCAACAGAGCCAAGTGCAGTGGTGTAGACCTGTAGTCCCAGCACTCAGGCTCAGGCAAGACGGCTCCAAGTCGGAGGCCAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CCA 90 bp | TGTGAGATGGAGGGCATCCCATTTTCCCTCAGGACCTTAGGTAACTaGCATGTGCCCACTAAGAGGCCCCACTACTGCCCTAGGACCCTT | + |
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Preference number: 1 (lower is better) Translates to: CEMEGIPFSLRTLGN*HVPTKRPHYCPRTL Trigger: AAGGGTCCTAGGGCAGTAGTGGGGCCTCTTAGTGGGCACATGCCAGTTACCTAAGGTCCTGAGGGAAAATGGGATGCCCTCCATCTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR TCA 90 bp | GTAACCAGTAAGATCACTGTGCTCGGTCTGAACAGGAGTCCACCTTaGGTTGAGAGTGTGAGATGGAGGGCATCCCATTTTCCCTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: VTSKITVLGLNRSPP*VESVRWRASHFPSG Trigger: TCCTGAGGGAAAATGGGATGCCCTCCATCTCACACTCTCAACTCAAGGTGGACTCCTGTTCAGACCGAGCACAGTGATCTTACTGGTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CCA 90 bp | AAAATCACTACTGTCCTAGAAGCGTGCTGGATTTGTCTGTGTGACTaGCTGCTGTCAGCGCTGCTTCTACCATTACTTGATGTGGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: KITTVLEACWICLCD*LLSALLLPLLDVGK Trigger: CTTCCCCACATCAAGTAATGGTAGAAGCAGCGCTGACAGCAGCCAGTCACACAGACAAATCCAGCACGCTTCTAGGACAGTAGTGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR GCA 90 bp | TGCTTAGATGTCAGGACCCATTCAGTGGGAACTGAGCCTGAACTCTaGCTGGTTTTGATAGAAGGAGCACTACTTGTAGAGCTAATGAAG | + |
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Preference number: 1 (lower is better) Translates to: CLDVRTHSVGTEPEL*LVLIEGALLVELMK Trigger: CTTCATTAGCTCTACAAGTAGTGCTCCTTCTATCAAAACCAGGCAGAGTTCAGGCTCAGTTCCCACTGAATGGGTCCTGACATCTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR TCA 90 bp | CAGAAGAGGGTGTTGGTTTCCTACAAACTGGAGTTACAGAGGTTATaGGCTTTTCTATCTGTGCTGGGTTCTCTGGAAGAGCAACAAGTG | + |
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Preference number: 1 (lower is better) Translates to: QKRVLVSYKLELQRL*AFLSVLGSLEEQQV Trigger: CACTTGTTGCTCTTCCAGAGAACCCAGCACAGATAGAAAAGCTCATAACCTCTGTAACTCCAGTTTGTAGGAAACCAACACCCTCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR TCA 90 bp | ACTCTCCAGCTCTCCTGGGGGTTGGTTGGTGGAATTACTCTGTATTaGCAAGTACAAGTTACTGCCTATGCTTTGTACCTTAGGCTACAA | + |
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Preference number: 1 (lower is better) Translates to: TLQLSWGLVGGITLY*QVQVTAYALYLRLQ Trigger: TTGTAGCCTAAGGTACAAAGCATAGGCAGTAACTTGTACTTGTCAATACAGAGTAATTCCACCAACCAACCCCCAGGAGAGCTGGAGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CCA 90 bp | AGTGAGAACAGCATTTCCAAACTGACTTTGCTGCTAGCCTTGCTCTaGCACCCAGCATTACATTTGCATTACATTAAGCTGCTTAGATGT | + |
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Preference number: 1 (lower is better) Translates to: SENSISKLTLLLALL*HPALHLHYIKLLRC Trigger: ACATCTAAGCAGCTTAATGTAATGCAAATGTAATGCTGGGTGCCAGAGCAAGGCTAGCAGCAAAGTCAGTTTGGAAATGCTGTTCTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CCA 90 bp | TTTGCTTTCAGTAAGTACTCTCCAGCTCTCCTGGGGGTTGGTTGGTaGAATTACTCTGTATTGACAAGTACAAGTTACTGCCTATGCTTT | + |
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Preference number: 1 (lower is better) Translates to: FAFSKYSPALLGVGW*NYSVLTSTSYCLCF Trigger: AAAGCATAGGCAGTAACTTGTACTTGTCAATACAGAGTAATTCCACCAACCAACCCCCAGGAGAGCTGGAGAGTACTTACTGAAAGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CCA 90 bp | TATTTTGCTTTCAGTAAGTACTCTCCAGCTCTCCTGGGGGTTGGTTaGTGGAATTACTCTGTATTGACAAGTACAAGTTACTGCCTATGC | + |
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Preference number: 1 (lower is better) Translates to: YFAFSKYSPALLGVG*WNYSVLTSTSYCLC Trigger: GCATAGGCAGTAACTTGTACTTGTCAATACAGAGTAATTCCACCAACCAACCCCCAGGAGAGCTGGAGAGTACTTACTGAAAGCAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CAA 90 bp | CCCTGGGCAGGCTTAGGTGCACTGCATTTATCGATGAGCCATTTCTaGAGTTCAGTTGTTTCCCACCTCCTGGTGAGGCTGTCAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: PWAGLGALHLSMSHF*SSVVSHLLVRLSGV Trigger: AACTCCTGACAGCCTCACCAGGAGGTGGGAAACAACTGAACTCAAGAAATGGCTCATCGATAAATGCAGTGCACCTAAGCCTGCCCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR GCA 90 bp | CACTACTGCCCTAGGACCCTTCCTCATGCCTTTGCCAGCCACGTTCTCATTTCTACCTGCATGGACATCTaGACCACACTAGTTAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: HYCPRTLPHAFASHVLISTCMDI*TTLVSA Trigger: GGCACTAACTAGTGTGGTGCAGATGTCCATGCAGGT...AGAAATGAGAACGTGGCTGGCAAAGGCATGAGGAAGGGTCCTAGGGCAGTAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CAA 90 bp | CCACTAAGAGGCCCCACTACTGCCCTAGGACCCTTCCTCATGCCTTaGCCAGCCACGTTCTCATTTCTTTTTGATGTAACAGGTATAGAG | + |
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Preference number: 2 (lower is better) Translates to: PLRGPTTALGPFLMP*PATFSFLFDVTGIE Trigger: CTCTATACCTGTTACATCAAAAAGAAATGAGAACGTGGCTGGCAAAGGCATGAGGAAGGGTCCTAGGGCAGTAGTGGGGCCTCTTAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR TCA 90 bp | CTACAGGTCTACACCACTGCACTTGGCTCTGTTGGGTACATCAGATGCATCATCGTGTTCTCTCAGACCTaGAAGGCCAGGCTAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: LQVYTTALGSVGYIRCIIVFSQT*KARLNS Trigger: ACTGTTTAGCCTGGCCTTTCAGGTCTGAGAGAACAC...GATGATGCATCTGATGTACCCAACAGAGCCAAGTGCAGTGGTGTAGACCTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGTCTTTGGCCTGTCTCAGAAGAAGGAGCGGAATAGGGGACAGTACTGTGGCCAGAAGAGGGTGTTaGTTTCCTACAAACTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: TVSLACLRRRSGIGDSTVARRGC*FPTNWS Trigger: ACTCCAGTTTGTAGGAAACCAACACCCTCTTCTGGC...CACAGTACTGTCCCCTATTCCGCTCCTTCTTCTGAGACAGGCCAAAGACACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CAA 90 bp | TTGGCCTGTCTCAGAAGAAGGAGCGGAATAGGGGACAGTACTGTGTaGGAGGAGGGGTTTAACAGTTTAGCAGCTAAGGACCTTTATGAG | + |
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Preference number: 2 (lower is better) Translates to: LACLRRRSGIGDSTV*EEGFNSLAAKDLYE Trigger: CTCATAAAGGTCCTTAGCTGCTAAACTGTTAAACCCCTCCTCCAACACAGTACTGTCCCCTATTCCGCTCCTTCTTCTGAGACAGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGCACTGCATTTATCGATGAGCCATTTCTTGAGTTCAGTTGTTTCCCACCTCGTCCTAGAAGCGTGCTaGATTTGTCTGTGTGACTGG | + |
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Preference number: 2 (lower is better) Translates to: GALHLSMSHFLSSVVSHLVLEAC*ICLCDW Trigger: CCAGTCACACAGACAAATCCAGCACGCTTCTAGGAC...GAGGTGGGAAACAACTGAACTCAAGAAATGGCTCATCGATAAATGCAGTGCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CAA 90 bp | AAACTGACTTTGCTGCTAGCCTTGCTCTGGCACCCAGCATTACATTaGCATTACATTAAGCTGCTTAGATGTCAGGACCCATTCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: KLTLLLALLWHPALH*HYIKLLRCQDPFSG Trigger: CCCACTGAATGGGTCCTGACATCTAAGCAGCTTAATGTAATGCAAATGTAATGCTGGGTGCCAGAGCAAGGCTAGCAGCAAAGTCAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR TCA 90 bp | TGCATAAGCCAGAAGAGGGTGTTGGTTTCCTACAAACTGGAGTTACAGAGGTTAAGTGCTCTTAAACTCTaGGCCCTCCTCAGATCCTTC | + |
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Preference number: 2 (lower is better) Translates to: CISQKRVLVSYKLELQRLSALKL*ALLRSF Trigger: GAAGGATCTGAGGAGGGCTCAGAGTTTAAGAGCACT...TAACCTCTGTAACTCCAGTTTGTAGGAAACCAACACCCTCTTCTGGCTTATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGGCCCTGGGCAGGCTTAGGTGCACTGCATTTATCGATGAGCCATTTCTTGGAATTACTCTGTATTaGCAAGTACAAGTTACTGCC | + |
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Preference number: 2 (lower is better) Translates to: VLALGRLRCTAFIDEPFLGITLY*QVQVTA Trigger: GGCAGTAACTTGTACTTGTCAATACAGAGTAATTCC...AAGAAATGGCTCATCGATAAATGCAGTGCACCTAAGCCTGCCCAGGGCCAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTTGGAGGAGGGGTTTAACAGTTTAGCAGCTAAGGACCTTTATGAGTACAAATTAGTGCCTGGTGTCTaGATAAGCCAGAAGAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VLEEGFNSLAAKDLYEYKLVPGV*ISQKRV Trigger: CACCCTCTTCTGGCTTATGCAGACACCAGGCACTAA...TTTGTACTCATAAAGGTCCTTAGCTGCTAAACTGTTAAACCCCTCCTCCAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGGCAGGCTTAGGTGCACTGCATTTATCGATGAGCCATTTCTTGAGTTCATGGTTTCCTACAAACTaGAGTTACAGAGGTTATGAG | + |
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Preference number: 2 (lower is better) Translates to: PWAGLGALHLSMSHFLSSWFPTN*SYRGYE Trigger: CTCATAACCTCTGTAACTCCAGTTTGTAGGAAACCA...TGAACTCAAGAAATGGCTCATCGATAAATGCAGTGCACCTAAGCCTGCCCAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CAA 90 bp | AACACTAGTGAGAACAGCATTTCCAAACTGACTTTGCTGCTAGCCTaGCTCTGGCACCCAGCATTACATTTGCATTACATTAAGCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: NTSENSISKLTLLLA*LWHPALHLHYIKLL Trigger: AAGCAGCTTAATGTAATGCAAATGTAATGCTGGGTGCCAGAGCAAGGCTAGCAGCAAAGTCAGTTTGGAAATGCTGTTCTCACTAGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGGAGGAGGGGTTTAACAGTTTAGCAGCTAAGGACCTTTATGAGTACAAAGAGTTACAGAGGTTATaGGCTTTTCTATCTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VLEEGFNSLAAKDLYEYKELQRL*AFLSVL Trigger: CAGCACAGATAGAAAAGCTCATAACCTCTGTAACTC...TTTGTACTCATAAAGGTCCTTAGCTGCTAAACTGTTAAACCCCTCCTCCAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCATGCCTTTGCCAGCCACGTTCTCATTTCTTTTTGATGTAACAGGTATAACTGAGCCTGAACTCTaGCTGGTTTTGATAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: FLMPLPATFSFLFDVTGITEPEL*LVLIEG Trigger: TCCTTCTATCAAAACCAGGCAGAGTTCAGGCTCAGT...TATACCTGTTACATCAAAAAGAAATGAGAACGTGGCTGGCAAAGGCATGAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAACTAAATAAAAATCACTACTGTCCTAGAAGCGTGCTGGATTTGTCTGTGCTGCTAGCCTTGCTCTaGCACCCAGCATTACATTTG | + |
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Preference number: 2 (lower is better) Translates to: TKLNKNHYCPRSVLDLSVLLALL*HPALHL Trigger: CAAATGTAATGCTGGGTGCCAGAGCAAGGCTAGCAG...CACAGACAAATCCAGCACGCTTCTAGGACAGTAGTGATTTTTATTTAGTTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCATGCCTTTGCCAGCCACGTTCTCATTTCTTTTTGATGTAACAGGTATACTGGGGGTTGGTTGGTaGAATTACTCTGTATTGACA | + |
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Preference number: 2 (lower is better) Translates to: FLMPLPATFSFLFDVTGILGVGW*NYSVLT Trigger: TGTCAATACAGAGTAATTCCACCAACCAACCCCCAG...TATACCTGTTACATCAAAAAGAAATGAGAACGTGGCTGGCAAAGGCATGAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR GCA 72 bp | GGCCTCCGACTTGGAGCCGTCTTGCCTGAGCCTGAGTaGTGGGACTACAGGTCTACACCACTGCACTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: GLRLGAVLPEPE*WDYRSTPLHLA Trigger: AGCCAAGTGCAGTGGTGTAGACCTGTAGTCCCAGCACTCAGGCTCAGGCAAGACGGCTCCAAGTCGGAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR GCA 72 bp | AGCAACCTCAGGCTGGCCTCCGACTTGGAGCCGTCTTaGCTGAGCCTGAGTGCTGGGACTACAGGTCTACAC | + |
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Preference number: 3 (lower is better) Translates to: SNLRLASDLEPS*LSLSAGTTGLH Trigger: GTGTAGACCTGTAGTCCCAGCACTCAGGCTCAGGCAAGACGGCTCCAAGTCGGAGGCCAGCCTGAGGTTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR GCA 72 bp | GGTAACTGGCATGTGCCCACTAAGAGGCCCCACTACTaGCCTAGGACCCTTCCTCATGCCTTTGCCAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: GNWHVPTKRPHY*PRTLPHAFASH Trigger: GTGGCTGGCAAAGGCATGAGGAAGGGTCCTAGGGCAGTAGTGGGGCCTCTTAGTGGGCACATGCCAGTTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CCA 72 bp | CTCCGACTTGGAGCCGTCTTGCCTGAGCCTGAGTGCTaGGACTACAGGTCTACACCACTGCACTTGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LRLGAVLPEPEC*DYRSTPLHLAL Trigger: CAGAGCCAAGTGCAGTGGTGTAGACCTGTAGTCCCAGCACTCAGGCTCAGGCAAGACGGCTCCAAGTCGGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR TCA 72 bp | TCACCCCACACGGTCTTCCCCTTCAGTGGGATCTGTTaGGCCTCTGTAATACGTCTTGGCCCTGGGCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SPHTVFPFSGIC*ASVIRLGPGQA Trigger: AGCCTGCCCAGGGCCAAGACGTATTACAGAGGCTCAACAGATCCCACTGAAGGGGAAGACCGTGTGGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR CCA 72 bp | GAGGGCATCCCATTTTCCCTCAGGACCTTAGGTAACTaGCATGTGCCCACTAAGAGGCCCCACTACTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: EGIPFSLRTLGN*HVPTKRPHYCP Trigger: AGGGCAGTAGTGGGGCCTCTTAGTGGGCACATGCCAGTTACCTAAGGTCCTGAGGGAAAATGGGATGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR CAA 90 bp | CACTACTGCCCTAGGACCCTTCCTCATGCCTTTGCCAGCCACGTTCTCATTTCTCAGCTCTCCTGGGGGTaGGTTGGTGGAATTACTCTG | + |
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Preference number: 3 (lower is better) Translates to: HYCPRTLPHAFASHVLISQLSWG*VGGITL Trigger: CAGAGTAATTCCACCAACCAACCCCCAGGAGAGCTG...AGAAATGAGAACGTGGCTGGCAAAGGCATGAGGAAGGGTCCTAGGGCAGTAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR GCA 72 bp | GTGTGTAGAAAGAAAATGCCCTTGAGGGCTCCACCCTaGCTGCCCGTCACCTCAACGTCTGTAGCTTTAGTA | + |
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Preference number: 3 (lower is better) Translates to: VCRKKMPLRAPP*LPVTSTSVALV Trigger: TACTAAAGCTACAGACGTTGAGGTGACGGGCAGGCAGGGTGGAGCCCTCAAGGGCATTTTCTTTCTACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR GCA 72 bp | CTGAGCCTGAGTGCTGGGACTACAGGTCTACACCACTaGACTTGGCTCTGTTGGGTACATCAGATGCATCAT | + |
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Preference number: 3 (lower is better) Translates to: LSLSAGTTGLHH*TWLCWVHQMHH Trigger: ATGATGCATCTGATGTACCCAACAGAGCCAAGTGCAGTGGTGTAGACCTGTAGTCCCAGCACTCAGGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGGCAGGCTTAGGTGCACTGCATTTATCGATGAGCCATTTCTTGAGTTCAACTTTGCTGCTAGCCTaGCTCTGGCACCCAGCATTA | + |
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Preference number: 3 (lower is better) Translates to: PWAGLGALHLSMSHFLSSTLLLA*LWHPAL Trigger: TAATGCTGGGTGCCAGAGCAAGGCTAGCAGCAAAGT...TGAACTCAAGAAATGGCTCATCGATAAATGCAGTGCACCTAAGCCTGCCCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR CAA 90 bp | CTACAGGTCTACACCACTGCACTTGGCTCTGTTGGGTACATCAGATGCATCATCCCCTTCCTCATGCCTTaGCCAGCCACGTTCTCATTT | + |
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Preference number: 3 (lower is better) Translates to: LQVYTTALGSVGYIRCIIPFLMP*PATFSF Trigger: AAATGAGAACGTGGCTGGCAAAGGCATGAGGAAGGG...GATGATGCATCTGATGTACCCAACAGAGCCAAGTGCAGTGGTGTAGACCTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR TCA 72 bp | CACTACTGTCCTAGAAGCGTGCTGGATTTGTCTGTGTaGCTGGCTGCTGTCAGCGCTGCTTCTACCATTACT | + |
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Preference number: 3 (lower is better) Translates to: HYCPRSVLDLSV*LAAVSAASTIT Trigger: AGTAATGGTAGAAGCAGCGCTGACAGCAGCCAGTCACACAGACAAATCCAGCACGCTTCTAGGACAGTAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR GCA 72 bp | GCTGGATTTGTCTGTGTGACTGGCTGCTGTCAGCGCTaGTTCTACCATTACTTGATGTGGGGAAGCAATCAC | + |
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Preference number: 3 (lower is better) Translates to: AGFVCVTGCCQR*FYHYLMWGSNH Trigger: GTGATTGCTTCCCCACATCAAGTAATGGTAGAAGCAGCGCTGACAGCAGCCAGTCACACAGACAAATCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR TCA 72 bp | AAGATCACTGTGCTCGGTCTGAACAGGAGTCCACCTTaGGTTGAGAGTGTGAGATGGAGGGCATCCCATTTT | + |
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Preference number: 3 (lower is better) Translates to: KITVLGLNRSPP*VESVRWRASHF Trigger: AAAATGGGATGCCCTCCATCTCACACTCTCAACTCAAGGTGGACTCCTGTTCAGACCGAGCACAGTGATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR TCA 72 bp | ACTTGGCTCTGTTGGGTACATCAGATGCATCATCAGTaGATAAGTCACCCCACACGGTCTTCCCCTTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: TWLCWVHQMHHQ*ISHPTRSSPSV Trigger: CACTGAAGGGGAAGACCGTGTGGGGTGACTTATTCACTGATGATGCATCTGATGTACCCAACAGAGCCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR GCA 72 bp | GTCAGGACCCATTCAGTGGGAACTGAGCCTGAACTCTaGCTGGTTTTGATAGAAGGAGCACTACTTGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: VRTHSVGTEPEL*LVLIEGALLVE Trigger: CTCTACAAGTAGTGCTCCTTCTATCAAAACCAGGCAGAGTTCAGGCTCAGTTCCCACTGAATGGGTCCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGGCAGGCTTAGGTGCACTGCATTTATCGATGAGCCATTTCTTGAGTTCATCTCCTGGGGGTTGGTaGGTGGAATTACTCTGTATT | + |
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Preference number: 3 (lower is better) Translates to: PWAGLGALHLSMSHFLSSSPGGW*VELLCI Trigger: AATACAGAGTAATTCCACCAACCAACCCCCAGGAGA...TGAACTCAAGAAATGGCTCATCGATAAATGCAGTGCACCTAAGCCTGCCCAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR GCA 72 bp | TCTGGCACCCAGCATTACATTTGCATTACATTAAGCTaGTTAGATGTCAGGACCCATTCAGTGGGAACTGAG | + |
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Preference number: 3 (lower is better) Translates to: SGTQHYICITLS*LDVRTHSVGTE Trigger: CTCAGTTCCCACTGAATGGGTCCTGACATCTAAGCAGCTTAATGTAATGCAAATGTAATGCTGGGTGCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR TCA 72 bp | GTGTTGGTTTCCTACAAACTGGAGTTACAGAGGTTATaGGCTTTTCTATCTGTGCTGGGTTCTCTGGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: VLVSYKLELQRL*AFLSVLGSLEE Trigger: CTCTTCCAGAGAACCCAGCACAGATAGAAAAGCTCATAACCTCTGTAACTCCAGTTTGTAGGAAACCAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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| 3UTR TCA 72 bp | CTCTCCTGGGGGTTGGTTGGTGGAATTACTCTGTATTaGCAAGTACAAGTTACTGCCTATGCTTTGTACCTT | + |
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Preference number: 3 (lower is better) Translates to: LSWGLVGGITLY*QVQVTAYALYL Trigger: AAGGTACAAAGCATAGGCAGTAACTTGTACTTGTCAATACAGAGTAATTCCACCAACCAACCCCCAGGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| 3UTR CCA 72 bp | AGCATTTCCAAACTGACTTTGCTGCTAGCCTTGCTCTaGCACCCAGCATTACATTTGCATTACATTAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SISKLTLLLALL*HPALHLHYIKL Trigger: CAGCTTAATGTAATGCAAATGTAATGCTGGGTGCCAGAGCAAGGCTAGCAGCAAAGTCAGTTTGGAAATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| 3UTR CCA 72 bp | TTCAGTAAGTACTCTCCAGCTCTCCTGGGGGTTGGTTaGTGGAATTACTCTGTATTGACAAGTACAAGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: FSKYSPALLGVG*WNYSVLTSTSY Trigger: GTAACTTGTACTTGTCAATACAGAGTAATTCCACCAACCAACCCCCAGGAGAGCTGGAGAGTACTTACTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCATAAGCCAGAAGAGGGTGTTGGTTTCCTACAAACTGGAGTTACAGAGGTTACACCCAGCATTACATTaGCATTACATTAAGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CISQKRVLVSYKLELQRLHPALH*HYIKLL Trigger: AAGCAGCTTAATGTAATGCAAATGTAATGCTGGGTG...TAACCTCTGTAACTCCAGTTTGTAGGAAACCAACACCCTCTTCTGGCTTATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| 3UTR CAA 72 bp | ACTCCCCACTCCAGCAACCTCAGGCTGGCCTCCGACTaGGAGCCGTCTTGCCTGAGCCTGAGTGCTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TPHSSNLRLASD*EPSCLSLSAGT Trigger: AGTCCCAGCACTCAGGCTCAGGCAAGACGGCTCCAAGTCGGAGGCCAGCCTGAGGTTGCTGGAGTGGGGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| 3UTR CAA 72 bp | GTCACCCCACACGGTCTTCCCCTTCAGTGGGATCTGTaGAGCCTCTGTAATACGTCTTGGCCCTGGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTPHGLPLQWDL*SLCNTSWPWAG Trigger: GCCTGCCCAGGGCCAAGACGTATTACAGAGGCTCAACAGATCCCACTGAAGGGGAAGACCGTGTGGGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGTCTTTGGCCTGTCTCAGAAGAAGGAGCGGAATAGGGGACAGTACTGTGGACCTGCAACCCGAGTaGGCAGCGTCCTTGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: TVSLACLRRRSGIGDSTVDLQPE*AASLGF Trigger: AAATCCCAAGGACGCTGCTCACTCGGGTTGCAGGTC...CACAGTACTGTCCCCTATTCCGCTCCTTCTTCTGAGACAGGCCAAAGACACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| 3UTR CAA 72 bp | GGCCCCACTACTGCCCTAGGACCCTTCCTCATGCCTTaGCCAGCCACGTTCTCATTTCTTTTTGATGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: GPTTALGPFLMP*PATFSFLFDVT Trigger: TGTTACATCAAAAAGAAATGAGAACGTGGCTGGCAAAGGCATGAGGAAGGGTCCTAGGGCAGTAGTGGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCACCCAGCATTACATTTGCATTACATTAAGCTGCTTAGATGTCAGGACGCAACCTCTGTCGCTTaGCCTCCTGCTCCAGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LWHPALHLHYIKLLRCQDATSVA*PPAPEL Trigger: TAACTCTGGAGCAGGAGGCCAAGCGACAGAGGTTGC...GTCCTGACATCTAAGCAGCTTAATGTAATGCAAATGTAATGCTGGGTGCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTCATGCCTTTGCCAGCCACGTTCTCATTTCTTTTTGATGTAACAGGTATACTCCGGACTTGGCATTaGCAACCTCTGTCGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLMPLPATFSFLFDVTGILRTWH*QPLSLG Trigger: GCCAAGCGACAGAGGTTGCCAATGCCAAGTCCGGAG...TATACCTGTTACATCAAAAAGAAATGAGAACGTGGCTGGCAAAGGCATGAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTGGCCCTGGGCAGGCTTAGGTGCACTGCATTTATCGATGAGCCATTTCTTTTCTTGAGAGAGATGTaGGAACTTTGCATGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLALGRLRCTAFIDEPFLFLREM*ELCMEN Trigger: ATTCTCCATGCAAAGTTCCCACATCTCTCTCAAGAA...AAGAAATGGCTCATCGATAAATGCAGTGCACCTAAGCCTGCCCAGGGCCAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| 3UTR CAA 72 bp | TGGGACTACAGGTCTACACCACTGCACTTGGCTCTGTaGGGTACATCAGATGCATCATCAGTGAATAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WDYRSTPLHLAL*GTSDASSVNKS Trigger: TGACTTATTCACTGATGATGCATCTGATGTACCCAACAGAGCCAAGTGCAGTGGTGTAGACCTGTAGTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGTTGGTTTCCTACAAACTGGAGTTACAGAGGTTATGAGCTTTTCTATCTGCCTTCAGGAACGCTaGGGCTCTTCTACAAATACC | + |
|
Preference number: 4 (lower is better) Translates to: EGVGFLQTGVTEVMSFSICLQER*GSSTNT Trigger: GGTATTTGTAGAAGAGCCTCAGCGTTCCTGAAGGCA...GATAGAAAAGCTCATAACCTCTGTAACTCCAGTTTGTAGGAAACCAACACCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGTTGGTTTCCTACAAACTGGAGTTACAGAGGTTATGAGCTTTTCTATCCTGCTGGCAGGTCCATaGAGCTCCAGATTTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: EGVGFLQTGVTEVMSFSILLAGP*SSRFDF Trigger: AAAGTCAAATCTGGAGCTTCATGGACCTGCCAGCAG...GATAGAAAAGCTCATAACCTCTGTAACTCCAGTTTGTAGGAAACCAACACCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| 3UTR CAA 72 bp | CATTCAGTGGGAACTGAGCCTGAACTCTGCCTGGTTTaGATAGAAGGAGCACTACTTGTAGAGCTAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSVGTEPELCLV*IEGALLVELMK Trigger: CTTCATTAGCTCTACAAGTAGTGCTCCTTCTATCAAAACCAGGCAGAGTTCAGGCTCAGTTCCCACTGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTGTCTTTGGCCTGTCTCAGAAGAAGGAGCGGAATAGGGGACAGTACTGTGCTTTCCTTGACAACGTaGTATGAAGTAATTTACACT | + |
|
Preference number: 4 (lower is better) Translates to: TVSLACLRRRSGIGDSTVLSLTT*YEVIYT Trigger: AGTGTAAATTACTTCATACCACGTTGTCAAGGAAAG...CACAGTACTGTCCCCTATTCCGCTCCTTCTTCTGAGACAGGCCAAAGACACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| 3UTR CAA 72 bp | TTTAACACTAGTGAGAACAGCATTTCCAAACTGACTTaGCTGCTAGCCTTGCTCTGGCACCCAGCATTACAT | + |
|
Preference number: 4 (lower is better) Translates to: FNTSENSISKLT*LLALLWHPALH Trigger: ATGTAATGCTGGGTGCCAGAGCAAGGCTAGCAGCAAAGTCAGTTTGGAAATGCTGTTCTCACTAGTGTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR TCA 90 bp | GGTGCACTGCATTTATCGATGAGCCATTTCTTGAGTTCAGTTGTTTCCCACCTCACTGGAGAAAAGATGTaGCATGTGGTGTGTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GALHLSMSHFLSSVVSHLTGEKM*HVVCSY Trigger: ATAAGAACACACCACATGTCACATCTTTTCTCCAGT...GAGGTGGGAAACAACTGAACTCAAGAAATGGCTCATCGATAAATGCAGTGCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAACTAAATAAAAATCACTACTGTCCTAGAAGCGTGCTGGATTTGTCTGTGTGTCGCTTGGCCTCCTaGTCCAGAGTTAGAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TKLNKNHYCPRSVLDLSVCRLAS*SRVRSM Trigger: CATGCTTCTAACTCTGGAGCAGGAGGCCAAGCGACA...CACAGACAAATCCAGCACGCTTCTAGGACAGTAGTGATTTTTATTTAGTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTGGAGGAGGGGTTTAACAGTTTAGCAGCTAAGGACCTTTATGAGTACAAACACTGCTTGAATTTGTaGCAGACAATTCGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLEEGFNSLAAKDLYEYKHCLNL*QTIRPK Trigger: CTTTGGACGAATTGTCTGGCACAAATTCAAGCAGTG...TTTGTACTCATAAAGGTCCTTAGCTGCTAAACTGTTAAACCCCTCCTCCAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGTTGGTTTCCTACAAACTGGAGTTACAGAGGTTATGAGCTTTTCTATCGCATCTTCCCTCTCCTaGACAACTTTATCTACGTTA | + |
|
Preference number: 4 (lower is better) Translates to: EGVGFLQTGVTEVMSFSIASSLS*TTLSTL Trigger: TAACGTAGATAAAGTTGTCCAGGAGAGGGAAGATGC...GATAGAAAAGCTCATAACCTCTGTAACTCCAGTTTGTAGGAAACCAACACCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCATGCCTTTGCCAGCCACGTTCTCATTTCTTTTTGATGTAACAGGTATATCTTTCTTGCTTCAATaGGGGCGTGTTTCTCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FLMPLPATFSFLFDVTGISFLLQ*GRVSQF Trigger: GAATTGAGAAACACGCCCGCATTGAAGCAAGAAAGA...TATACCTGTTACATCAAAAAGAAATGAGAACGTGGCTGGCAAAGGCATGAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTCTTTGGCCTGTCTCAGAAGAAGGAGCGGAATAGGGGACAGTACTGTGGCTCCGGACTTGGCATaGGCAACCTCTGTCGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVSLACLRRRSGIGDSTVAPDLA*ATSVAW Trigger: CCAAGCGACAGAGGTTGCCAATGCCAAGTCCGGAGC...CACAGTACTGTCCCCTATTCCGCTCCTTCTTCTGAGACAGGCCAAAGACACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CAA 90 bp | CTACAGGTCTACACCACTGCACTTGGCTCTGTTGGGTACATCAGATGCATCATCGGCAACCTCTGTCGCTaGGCCTCCTGCTCCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQVYTTALGSVGYIRCIIGNLCR*ASCSRV Trigger: AACTCTGGAGCAGGAGGCCAAGCGACAGAGGTTGCC...GATGATGCATCTGATGTACCCAACAGAGCCAAGTGCAGTGGTGTAGACCTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CAA 90 bp | CACTACTGCCCTAGGACCCTTCCTCATGCCTTTGCCAGCCACGTTCTCATTTCTGGGTCTGGGCTTTTCTaGACCGGTCTGAAGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HYCPRTLPHAFASHVLISGSGLF*TGLKKP Trigger: AGGCTTCTTCAGACCGGTCAAGAAAAGCCCAGACCC...AGAAATGAGAACGTGGCTGGCAAAGGCATGAGGAAGGGTCCTAGGGCAGTAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS CCA 90 bp | GCCAGACAATTCGTCCAAAGATGTCCCTTCTCCAAGCACCGGGTCTaGGCTTTTCTTGACCGGTCTGAAGAAGCCTTAGAGCATCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARQFVQRCPFSKHRV*AFLDRSEEALEHLP Trigger: GGGAAGATGCTCTAAGGCTTCTTCAGACCGGTCAAGAAAAGCCCAGACCCGGTGCTTGGAGAAGGGACATCTTTGGACGAATTGTCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CAA 90 bp | CACTACTGCCCTAGGACCCTTCCTCATGCCTTTGCCAGCCACGTTCTCATTTCTCTTCCAGTCCTTTCCTaGACAACGTGGTATGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HYCPRTLPHAFASHVLISLPVLS*TTWYEV Trigger: TACTTCATACCACGTTGTCAAGGAAAGGACTGGAAG...AGAAATGAGAACGTGGCTGGCAAAGGCATGAGGAAGGGTCCTAGGGCAGTAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGGGCAGGCTTAGGTGCACTGCATTTATCGATGAGCCATTTCTTGAGTTCAGGCCACTGCTTGAATTaGTGCCAGACAATTCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PWAGLGALHLSMSHFLSSGHCLN*CQTIRP Trigger: TGGACGAATTGTCTGGCACAAATTCAAGCAGTGGCC...TGAACTCAAGAAATGGCTCATCGATAAATGCAGTGCACCTAAGCCTGCCCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS TCA 90 bp | GGTGTGTTCTTATGTAACAAACTAAGAGAAGACCTGCAACCCGAGTaGGCAGCGTCCTTGGGATTTACTAGGGAACAAGCTGCCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVFLCNKLREDLQPE*AASLGFTREQAAFR Trigger: CCTGAAGGCAGCTTGTTCCCTAGTAAATCCCAAGGACGCTGCTCACTCGGGTTGCAGGTCTTCTCTTAGTTTGTTACATAAGAACACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGTGTTCTCTCAGACCTGAAAGGCCAGGCTAAACAGTGTCTTTGGCCTGTCGTAAACTTCTCTTTCTaGCTTCAATGCGGGCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSVLSDLKGQAKQCLWPVVNFSF*LQCGRV Trigger: AACACGCCCGCATTGAAGCAAGAAAGAGAAGTTTAC...GACAGGCCAAAGACACTGTTTAGCCTGGCCTTTCAGGTCTGAGAGAACACTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAACTAAATAAAAATCACTACTGTCCTAGAAGCGTGCTGGATTTGTCTGTGCTAAGCGCTCCGGACTaGGCATTGGCAACCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TKLNKNHYCPRSVLDLSVLSAPD*ALATSV Trigger: GACAGAGGTTGCCAATGCCAAGTCCGGAGCGCTTAG...CACAGACAAATCCAGCACGCTTCTAGGACAGTAGTGATTTTTATTTAGTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS-3UTR CAA 90 bp | GGTGCACTGCATTTATCGATGAGCCATTTCTTGAGTTCAGTTGTTTCCCACCTCGGTATAGGCCACTGCTaGAATTTGTGCCAGACAATT | + |
|
Preference number: 5 (lower is better) Translates to: GALHLSMSHFLSSVVSHLGIGHC*NLCQTI Trigger: AATTGTCTGGCACAAATTCAAGCAGTGGCCTATACC...GAGGTGGGAAACAACTGAACTCAAGAAATGGCTCATCGATAAATGCAGTGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS CAA 72 bp | AATCAACGACCTTTTCTAAGCGCTCCGGACTTGGCATaGGCAACCTCTGTCGCTTGGCCTCCTGCTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: NQRPFLSAPDLA*ATSVAWPPAPE Trigger: CTCTGGAGCAGGAGGCCAAGCGACAGAGGTTGCCAATGCCAAGTCCGGAGCGCTTAGAAAAGGTCGTTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS CAA 72 bp | CCATGGAATCAACGACCTTTTCTAAGCGCTCCGGACTaGGCATTGGCAACCTCTGTCGCTTGGCCTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PWNQRPFLSAPD*ALATSVAWPPA Trigger: AGCAGGAGGCCAAGCGACAGAGGTTGCCAATGCCAAGTCCGGAGCGCTTAGAAAAGGTCGTTGATTCCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS CCA 72 bp | AGCGCTCCGGACTTGGCATTGGCAACCTCTGTCGCTTaGCCTCCTGCTCCAGAGTTAGAAGCATGTTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SAPDLALATSVA*PPAPELEACFF Trigger: AAAGAAACATGCTTCTAACTCTGGAGCAGGAGGCCAAGCGACAGAGGTTGCCAATGCCAAGTCCGGAGCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS CAA 72 bp | AAGCGCTCCGGACTTGGCATTGGCAACCTCTGTCGCTaGGCCTCCTGCTCCAGAGTTAGAAGCATGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KRSGLGIGNLCR*ASCSRVRSMFL Trigger: AAGAAACATGCTTCTAACTCTGGAGCAGGAGGCCAAGCGACAGAGGTTGCCAATGCCAAGTCCGGAGCGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS CAA 90 bp | TATCCATGGAATCAACGACCTTTTCTAAGCGCTCCGGACTTGGCATaGGCAACCTCTGTCGCTTGGCCTCCTGCTCCAGAGTTAGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YPWNQRPFLSAPDLA*ATSVAWPPAPELEA Trigger: TGCTTCTAACTCTGGAGCAGGAGGCCAAGCGACAGAGGTTGCCAATGCCAAGTCCGGAGCGCTTAGAAAAGGTCGTTGATTCCATGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS CAA 90 bp | CTACGTTATCCATGGAATCAACGACCTTTTCTAAGCGCTCCGGACTaGGCATTGGCAACCTCTGTCGCTTGGCCTCCTGCTCCAGAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LRYPWNQRPFLSAPD*ALATSVAWPPAPEL Trigger: TAACTCTGGAGCAGGAGGCCAAGCGACAGAGGTTGCCAATGCCAAGTCCGGAGCGCTTAGAAAAGGTCGTTGATTCCATGGATAACGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS CCA 72 bp | CTTCCCTCTCCTGGACAACTTTATCTACGTTATCCATaGAATCAACGACCTTTTCTAAGCGCTCCGGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPSPGQLYLRYP*NQRPFLSAPDL Trigger: CAAGTCCGGAGCGCTTAGAAAAGGTCGTTGATTCCATGGATAACGTAGATAAAGTTGTCCAGGAGAGGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS TCA 72 bp | TTATGTAACAAACTAAGAGAAGACCTGCAACCCGAGTaGGCAGCGTCCTTGGGATTTACTAGGGAACAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LCNKLREDLQPE*AASLGFTREQA Trigger: AGCTTGTTCCCTAGTAAATCCCAAGGACGCTGCTCACTCGGGTTGCAGGTCTTCTCTTAGTTTGTTACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS CAA 72 bp | AGGACATACCAAAGCTTATGTAAGTCTTCGTTACTTTaGTTCCTCAGCTGCTGGCAGGTCCATGAAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RTYQSLCKSSLL*FLSCWQVHEAP Trigger: TGGAGCTTCATGGACCTGCCAGCAGCTGAGGAACAAAAGTAACGAAGACTTACATAAGCTTTGGTATGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
||
| CDS GCA 72 bp | TTGTATCTTTTATTTAGGTACCAAGGTATAGGCCACTaGTTGAATTTGTGCCAGACAATTCGTCCAAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LYLLFRYQGIGH*LNLCQTIRPKM Trigger: CATCTTTGGACGAATTGTCTGGCACAAATTCAAGCAGTGGCCTATACCTTGGTACCTAAATAAAAGATACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043966.8 |
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