Pregenerated sensors for MRPL45 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018882Ensembl transcript IDs: ENSMUST00000019026.10
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAGGCAGGACAGGAGACAGCACGGGAAGCCTTCGGGGTACAGGTaGGTACAGGTGACTTTGCAGCCCCATCGGAACACCTCAGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: PRQDRRQHGKPSGYR*VQVTLQPHRNTSGV Trigger: GACTCCTGAGGTGTTCCGATGGGGCTGCAAAGTCACCTGTACCCACCTGTACCCCGAAGGCTTCCCGTGCTGTCTCCTGTCCTGCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR GCA 90 bp | AACTGTGTGTTGCCAAGGATGGCATCTAGTTCCTGGTCCTCTTCTTaGCCCAACTTCCCACGTGGCAGGACTGTAGCAGGGTGCCCTAGT | + |
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Preference number: 1 (lower is better) Translates to: NCVLPRMASSSWSSS*PNFPRGRTVAGCPS Trigger: ACTAGGGCACCCTGCTACAGTCCTGCCACGTGGGAAGTTGGGGCAAGAAGAGGACCAGGAACTAGATGCCATCCTTGGCAACACACAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR GCA 90 bp | CTTCTCATTTCACCTCAGAAGCTGAACATGGCTGTAAACAGAAGATaGTCCAAGGCGGGGCACCCCAGCCACCACCTGGCCACACAATCA | + |
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Preference number: 1 (lower is better) Translates to: LLISPQKLNMAVNRR*SKAGHPSHHLATQS Trigger: TGATTGTGTGGCCAGGTGGTGGCTGGGGTGCCCCGCCTTGGAGCATCTTCTGTTTACAGCCATGTTCAGCTTCTGAGGTGAAATGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR TCA 90 bp | CATAAACACAGGTGCAGACAGAACACTCAGGCATATAAGATTAAGTaGCTTTTAAACTGTGTGTTGCCAAGGATGGCATCTAGTTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: HKHRCRQNTQAYKIK*LLNCVLPRMASSSW Trigger: CCAGGAACTAGATGCCATCCTTGGCAACACACAGTTTAAAAGTCACTTAATCTTATATGCCTGAGTGTTCTGTCTGCACCTGTGTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGGTCCTCTTCTTGCCCCAACTTCCCACGTGGCAGGACTGTAGCAGGGTGTCTGATGCCACAGCTTaGTGCTGCTGGGAAAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: FLVLFLPQLPTWQDCSRVSDATA*CCWEKP Trigger: GGGCTTTTCCCAGCAGCAGCAAGCTGTGGCATCAGA...CACCCTGCTACAGTCCTGCCACGTGGGAAGTTGGGGCAAGAAGAGGACCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR CCA 90 bp | GGATGGCATCTAGTTCCTGGTCCTCTTCTTGCCCCAACTTCCCACGTGGCAGGAACAGCTTGCTGCTGCTaGGAAAAGCCCAGTGTCGCG | + |
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Preference number: 2 (lower is better) Translates to: GWHLVPGPLLAPTSHVAGTACCC*EKPSVA Trigger: CGCGACACTGGGCTTTTCCCAGCAGCAGCAAGCTGT...TCCTGCCACGTGGGAAGTTGGGGCAAGAAGAGGACCAGGAACTAGATGCCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR CCA 90 bp | TCCGTAACTCTAGTTCCAGGGGATCTGACACCCTCTTTGGACCTCCAAGGGCACCCCCAACTTCCCACGTaGCAGGACTGTAGCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SVTLVPGDLTPSLDLQGHPQLPT*QDCSRV Trigger: CACCCTGCTACAGTCCTGCCACGTGGGAAGTTGGGG...GTGCCCTTGGAGGTCCAAAGAGGGTGTCAGATCCCCTGGAACTAGAGTTACGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR TCA 90 bp | GGATGGCATCTAGTTCCTGGTCCTCTTCTTGCCCCAACTTCCCACGTGGCAGGACCTGCCTCTGCCTTCTaGGTGCTGGGATTAAAGATG | + |
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Preference number: 2 (lower is better) Translates to: GWHLVPGPLLAPTSHVAGPASAF*VLGLKM Trigger: CATCTTTAATCCCAGCACTCAGAAGGCAGAGGCAGG...TCCTGCCACGTGGGAAGTTGGGGCAAGAAGAGGACCAGGAACTAGATGCCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGAGGATGGGAGGCAGATCTCTATAAGGGAGGCTAGCCTGGTATACAAAGCCACAGCTTGCTGCTaGTGGGAAAAGCCCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: GREDGRQISIREASLVYKATACC*WEKPSV Trigger: GACACTGGGCTTTTCCCAGCAGCAGCAAGCTGTGGC...TTTGTATACCAGGCTAGCCTCCCTTATAGAGATCTGCCTCCCATCCTCCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR TCA 90 bp | GGATGGCATCTAGTTCCTGGTCCTCTTCTTGCCCCAACTTCCCACGTGGCAGGAAGACCAGACTGGCCTTaGACTCACAGAAATCCACCT | + |
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Preference number: 2 (lower is better) Translates to: GWHLVPGPLLAPTSHVAGRPDWP*THRNPP Trigger: AGGTGGATTTCTGTGAGTTCAAGGCCAGTCTGGTCT...TCCTGCCACGTGGGAAGTTGGGGCAAGAAGAGGACCAGGAACTAGATGCCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR CAA 90 bp | CTGATGCCACAGCTTGCTGCTGCTGGGAAAAGCCCAGTGTCGCGTTaGTTCTCTCTGCTGCTGCTTCTCATTTCACCTCAGAAGCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: LMPQLAAAGKSPVSR*FSLLLLLISPQKLN Trigger: GTTCAGCTTCTGAGGTGAAATGAGAAGCAGCAGCAGAGAGAACAAACGCGACACTGGGCTTTTCCCAGCAGCAGCAAGCTGTGGCATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR GCA 90 bp | CAAGGATGGCATCTAGTTCCTGGTCCTCTTCTTGCCCCAACTTCCCACGTGGCAAAATCCACCTGCCTCTaGCTTCTGAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: QGWHLVPGPLLAPTSHVAKSTCL*LLSAGI Trigger: AATCCCAGCACTCAGAAGGCAGAGGCAGGTGGATTT...TGCCACGTGGGAAGTTGGGGCAAGAAGAGGACCAGGAACTAGATGCCATCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTCCCATGCCTGACATCACAGAACCGCTCCGTCCCAGTCTGAACCAGGGACGCGTTTGTTCTCTCTaGTGCTGCTTCTCATTTCAC | + |
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Preference number: 2 (lower is better) Translates to: CFPMPDITEPLRPSLNQGRVCSL*CCFSFH Trigger: GTGAAATGAGAAGCAGCAGCAGAGAGAACAAACGCG...TCCCTGGTTCAGACTGGGACGGAGCGGTTCTGTGATGTCAGGCATGGGAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTCCCATGCCTGACATCACAGAACCGCTCCGTCCCAGTCTGAACCAGGGATGTTCTCTCTGCTGCTaGTTCTCATTTCACCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: CFPMPDITEPLRPSLNQGCSLCC*FSFHLR Trigger: TCTGAGGTGAAATGAGAAGCAGCAGCAGAGAGAACA...TCCCTGGTTCAGACTGGGACGGAGCGGTTCTGTGATGTCAGGCATGGGAAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGTTCACAACCATCCGTAACTCTAGTTCCAGGGGATCTGACACCCTCTTTCCTTCGGGGTACAGGTaGGTACAGGTGACTTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: WWFTTIRNSSSRGSDTLFPSGYR*VQVTLQ Trigger: CTGCAAAGTCACCTGTACCCACCTGTACCCCGAAGG...AAAGAGGGTGTCAGATCCCCTGGAACTAGAGTTACGGATGGTTGTGAACCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR GCA 90 bp | CAGTTTATCCAACTCTTTGACAGTATTTTATTCCAAATGCTGACTCGGCCTATATCACAGAAATCCACCTaGCTCTGCCTTCTGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: QFIQLFDSILFQMLTRPISQKST*LCLLSA Trigger: AGCACTCAGAAGGCAGAGGCAGGTGGATTTCTGTGA...TATAGGCCGAGTCAGCATTTGGAATAAAATACTGTCAAAGAGTTGGATAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR CCA 72 bp | GACAGGAGACAGCACGGGAAGCCTTCGGGGTACAGGTaGGTACAGGTGACTTTGCAGCCCCATCGGAACACC | + |
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Preference number: 3 (lower is better) Translates to: DRRQHGKPSGYR*VQVTLQPHRNT Trigger: GGTGTTCCGATGGGGCTGCAAAGTCACCTGTACCCACCTGTACCCCGAAGGCTTCCCGTGCTGTCTCCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR GCA 72 bp | TCACCTCAGAAGCTGAACATGGCTGTAAACAGAAGATaGTCCAAGGCGGGGCACCCCAGCCACCACCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: SPQKLNMAVNRR*SKAGHPSHHLA Trigger: GGCCAGGTGGTGGCTGGGGTGCCCCGCCTTGGAGCATCTTCTGTTTACAGCCATGTTCAGCTTCTGAGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR CAA 90 bp | TTCCTGGTCCTCTTCTTGCCCCAACTTCCCACGTGGCAGGACTGTAGCAGGGTGTGGGTACAGGTGACTTaGCAGCCCCATCGGAACACC | + |
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Preference number: 3 (lower is better) Translates to: FLVLFLPQLPTWQDCSRVWVQVT*QPHRNT Trigger: GGTGTTCCGATGGGGCTGCAAAGTCACCTGTACCCA...CACCCTGCTACAGTCCTGCCACGTGGGAAGTTGGGGCAAGAAGAGGACCAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR GCA 72 bp | TTGCCAAGGATGGCATCTAGTTCCTGGTCCTCTTCTTaGCCCAACTTCCCACGTGGCAGGACTGTAGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: LPRMASSSWSSS*PNFPRGRTVAG Trigger: CCCTGCTACAGTCCTGCCACGTGGGAAGTTGGGGCAAGAAGAGGACCAGGAACTAGATGCCATCCTTGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR CCA 72 bp | GAAAGCTGTGGGTCTGATGCCACAGCTTGCTGCTGCTaGGAAAAGCCCAGTGTCGCGTTTGTTCTCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: ESCGSDATACCC*EKPSVAFVLSA Trigger: AGCAGAGAGAACAAACGCGACACTGGGCTTTTCCCAGCAGCAGCAAGCTGTGGCATCAGACCCACAGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR GCA 72 bp | AAAGAAAGCTGTGGGTCTGATGCCACAGCTTGCTGCTaGTGGGAAAAGCCCAGTGTCGCGTTTGTTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: KESCGSDATACC*WEKPSVAFVLS Trigger: AGAGAGAACAAACGCGACACTGGGCTTTTCCCAGCAGCAGCAAGCTGTGGCATCAGACCCACAGCTTTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR GCA 72 bp | CAGGTTGGAGATGGCTCAGTGGGTAAGAACACTGACTaGTCTTCCAAAGGTCCCGAGTTCAAGTCCCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: QVGDGSVGKNTD*SSKGPEFKSQE Trigger: TTCCTGGGACTTGAACTCGGGACCTTTGGAAGAGCAGTCAGTGTTCTTACCCACTGAGCCATCTCCAACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR CCA 72 bp | TTAAACTGTGTGTTGCCAAGGATGGCATCTAGTTCCTaGTCCTCTTCTTGCCCCAACTTCCCACGTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LNCVLPRMASSS*SSSCPNFPRGR Trigger: CCTGCCACGTGGGAAGTTGGGGCAAGAAGAGGACCAGGAACTAGATGCCATCCTTGGCAACACACAGTTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR-3UTR CAA 90 bp | GGGAGGGAGGATGGGAGGCAGATCTCTATAAGGGAGGCTAGCCTGGTATACAAAAATACTTGTTACAGGTaGGAGATGGCTCAGTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: GREDGRQISIREASLVYKNTCYR*EMAQWV Trigger: TACCCACTGAGCCATCTCCAACCTGTAACAAGTATT...TTTGTATACCAGGCTAGCCTCCCTTATAGAGATCTGCCTCCCATCCTCCCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR TCA 72 bp | CCATGCCTGACATCACAGAACCGCTCCGTCCCAGTCTaGACCAGGGAAAATGTACAGAACACACAGTTTATC | + |
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Preference number: 3 (lower is better) Translates to: PCLTSQNRSVPV*TRENVQNTQFI Trigger: GATAAACTGTGTGTTCTGTACATTTTCCCTGGTTCAGACTGGGACGGAGCGGTTCTGTGATGTCAGGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR GCA 72 bp | AGGGTTTCTCTGTGTAGCTCTGGTTGTCCTGCAACTTaGTCTGTAGACCAGACTGGCCTTGAACTCACAGAA | + |
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Preference number: 3 (lower is better) Translates to: RVSLCSSGCPAT*SVDQTGLELTE Trigger: TTCTGTGAGTTCAAGGCCAGTCTGGTCTACAGAGCAAGTTGCAGGACAACCAGAGCTACACAGAGAAACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| 3UTR TCA 72 bp | AGGTGCAGACAGAACACTCAGGCATATAAGATTAAGTaGCTTTTAAACTGTGTGTTGCCAAGGATGGCATCT | + |
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Preference number: 3 (lower is better) Translates to: RCRQNTQAYKIK*LLNCVLPRMAS Trigger: AGATGCCATCCTTGGCAACACACAGTTTAAAAGTCACTTAATCTTATATGCCTGAGTGTTCTGTCTGCACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS-3UTR GCA 90 bp | TTCCTGGTCCTCTTCTTGCCCCAACTTCCCACGTGGCAGGACTGTAGCAGGGTGGGGCTGCTTAGGGGGTaGCCACGCGGGCACAATCTT | + |
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Preference number: 4 (lower is better) Translates to: FLVLFLPQLPTWQDCSRVGLLRG*PRGHNL Trigger: AAGATTGTGCCCGCGTGGGCACCCCCTAAGCAGCCC...CACCCTGCTACAGTCCTGCCACGTGGGAAGTTGGGGCAAGAAGAGGACCAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS-3UTR GCA 90 bp | TGGTGGTTCACAACCATCCGTAACTCTAGTTCCAGGGGATCTGACACCCTCTTTGTCTTGAGGATGGGCTaGTTAGGGGGTGCCCACGCG | + |
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Preference number: 4 (lower is better) Translates to: WWFTTIRNSSSRGSDTLFVLRMG*LGGAHA Trigger: CGCGTGGGCACCCCCTAAGCAGCCCATCCTCAAGAC...AAAGAGGGTGTCAGATCCCCTGGAACTAGAGTTACGGATGGTTGTGAACCACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS-3UTR TCA 90 bp | TGCTTTCCCATGCCTGACATCACAGAACCGCTCCGTCCCAGTCTGAACCAGGGATCGGATTGCCAGCTGTaGTGCCGCATTCTTTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: CFPMPDITEPLRPSLNQGSDCQL*CRILSQ Trigger: TTGAGAAAGAATGCGGCATCACAGCTGGCAATCCGA...TCCCTGGTTCAGACTGGGACGGAGCGGTTCTGTGATGTCAGGCATGGGAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS-3UTR GCA 90 bp | CTAGTTCCAGGGGATCTGACACCCTCTTTGGACCTCCAAGGGCACCAGCCATGCAATCGCTCAGTTCTCTaGGTCAATCCTTCCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: LVPGDLTPSLDLQGHQPCNRSVL*VNPSFE Trigger: TTCAAAGGAAGGATTGACGCAGAGAACTGAGCGATT...GCATGGCTGGTGCCCTTGGAGGTCCAAAGAGGGTGTCAGATCCCCTGGAACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS-3UTR GCA 90 bp | GTTGCTCTTGCAGAAGACACAGATCCAGTTCCTAGCACCTGTGGTGGTTCACAACCTGGCCATACATGTTaGTCTGGTTCACCAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VALAEDTDPVPSTCGGSQPGHTC*SGSPGL Trigger: CAGGCCTGGTGAACCAGAGCAACATGTATGGCCAGG...TTGTGAACCACCACAGGTGCTAGGAACTGGATCTGTGTCTTCTGCAAGAGCAAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS-3UTR TCA 90 bp | AAAAGCCCAGTGTCGCGTTTGTTCTCTCTGCTGCTGCTTCTCATTTCACCTCAGACTACAGTTGTGGACTaGGTCACCAGAATGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KSPVSRLFSLLLLLISPQTTVVD*VTRMGC Trigger: GCAGCCCATTCTGGTGACTCAGTCCACAACTGTAGT...CTGAGGTGAAATGAGAAGCAGCAGCAGAGAGAACAAACGCGACACTGGGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS-3UTR GCA 90 bp | CAAGGATGGCATCTAGTTCCTGGTCCTCTTCTTGCCCCAACTTCCCACGTGGCAGTCCATACATCAATCTaGCAAACCGATCATAAATGG | + |
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Preference number: 4 (lower is better) Translates to: QGWHLVPGPLLAPTSHVAVHTSI*QTDHKW Trigger: CCATTTATGATCGGTTTGGCAGATTGATGTATGGAC...TGCCACGTGGGAAGTTGGGGCAAGAAGAGGACCAGGAACTAGATGCCATCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS-3UTR TCA 90 bp | CAGTTTATCCAACTCTTTGACAGTATTTTATTCCAAATGCTGACTCGGCCTATACTGGTTCACCAGGCCTaGGCAACGGACATGAACCAC | + |
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Preference number: 4 (lower is better) Translates to: QFIQLFDSILFQMLTRPILVHQA*ATDMNH Trigger: GTGGTTCATGTCCGTTGCTCAGGCCTGGTGAACCAG...TATAGGCCGAGTCAGCATTTGGAATAAAATACTGTCAAAGAGTTGGATAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS-3UTR CAA 90 bp | TACTGCTTTCCCATGCCTGACATCACAGAACCGCTCCGTCCCAGTCTGAACCAGCCCCAGCGTACAGTCTaGTACTTGAGGTCCCAGACC | + |
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Preference number: 5 (lower is better) Translates to: YCFPMPDITEPLRPSLNQPQRTV*YLRSQT Trigger: GGTCTGGGACCTCAAGTACAAGACTGTACGCTGGGG...CTGGTTCAGACTGGGACGGAGCGGTTCTGTGATGTCAGGCATGGGAAAGCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS TCA 90 bp | TGGCCATACATGTTGCTCTGGTTCACCAGGCCTGAGCAACGGACATaGACCACTTGGGCTGGCTCTAGAGATTCCACAAAGCCCCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: WPYMLLWFTRPEQRT*TTWAGSRDSTKPQR Trigger: ACGCTGGGGCTTTGTGGAATCTCTAGAGCCAGCCCAAGTGGTTCATGTCCGTTGCTCAGGCCTGGTGAACCAGAGCAACATGTATGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS-3UTR CAA 90 bp | TGGGAAAAGCCCAGTGTCGCGTTTGTTCTCTCTGCTGCTGCTTCTCATTTCACCACCTGGCCATACATGTaGCTCTGGTTCACCAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: WEKPSVAFVLSAAASHFTTWPYM*LWFTRP Trigger: AGGCCTGGTGAACCAGAGCAACATGTATGGCCAGGT...GGTGAAATGAGAAGCAGCAGCAGAGAGAACAAACGCGACACTGGGCTTTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS-3UTR CAA 90 bp | GGATGGCATCTAGTTCCTGGTCCTCTTCTTGCCCCAACTTCCCACGTGGCAGGAGCGTCAATCCTTCCTTaGAAAGAGATGACATTCGAG | + |
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Preference number: 5 (lower is better) Translates to: GWHLVPGPLLAPTSHVAGASILP*KEMTFE Trigger: CTCGAATGTCATCTCTTTCAAAGGAAGGATTGACGC...TCCTGCCACGTGGGAAGTTGGGGCAAGAAGAGGACCAGGAACTAGATGCCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS TCA 72 bp | ATGTTGCTCTGGTTCACCAGGCCTGAGCAACGGACATaGACCACTTGGGCTGGCTCTAGAGATTCCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: MLLWFTRPEQRT*TTWAGSRDSTK Trigger: CTTTGTGGAATCTCTAGAGCCAGCCCAAGTGGTTCATGTCCGTTGCTCAGGCCTGGTGAACCAGAGCAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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| CDS CAA 72 bp | GGCTCTAGAGATTCCACAAAGCCCCAGCGTACAGTCTaGTACTTGAGGTCCCAGACCATGTCCGGAAAACAG | + |
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Preference number: 6 (lower is better) Translates to: GSRDSTKPQRTV*YLRSQTMSGKQ Trigger: CTGTTTTCCGGACATGGTCTGGGACCTCAAGTACAAGACTGTACGCTGGGGCTTTGTGGAATCTCTAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019026.10 |
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