Pregenerated sensors for MRPL44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026248Ensembl transcript IDs: ENSMUST00000027464.9
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | AAGCACTTGTCTAGTTCTAGGGCCCAGGAAGAGCACTaGGACACTGCTCCCATATTCTGCGCTCTTCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: KHLSSSRAQEEH*DTAPIFCALPL Trigger: GAGGGGAAGAGCGCAGAATATGGGAGCAGTGTCTCAGTGCTCTTCCTGGGCCCTAGAACTAGACAAGTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| 3UTR CCA 72 bp | ATAGCTTTTTATTCATATTACAACGAACTTCACATATaGCATGTATTTGACTACACTTCAAAGCTGGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: IAFYSYYNELHI*HVFDYTSKLEG Trigger: TCCCTCCAGCTTTGAAGTGTAGTCAAATACATGCCATATGTGAAGTTCGTTGTAATATGAATAAAAAGCTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR CCA 90 bp | CCCATATTCTGCGCTCTTCCCCTCTGGCCCTGTCTCACTGCTTTGCTCAGTAGTCCGGAGGAGCCAGCGTaGGGACGGCCGGAGCCAATA | + |
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Preference number: 4 (lower is better) Translates to: PIFCALPLWPCLTALLSSPEEPA*GRPEPI Trigger: TATTGGCTCCGGCCGTCCCCACGCTGGCTCCTCCGG...ACTACTGAGCAAAGCAGTGAGACAGGGCCAGAGGGGAAGAGCGCAGAATATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR CCA 90 bp | ACTGCTCCCATATTCTGCGCTCTTCCCCTCTGGCCCTGTCTCACTGCTTTGCTCCGCTCCAGCTCTTTCTaGAAGCGGAAGGCGGCACGG | + |
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Preference number: 4 (lower is better) Translates to: TAPIFCALPLWPCLTALLRSSSF*KRKAAR Trigger: CCGTGCCGCCTTCCGCTTCCAGAAAGAGCTGGAGCG...GAGCAAAGCAGTGAGACAGGGCCAGAGGGGAAGAGCGCAGAATATGGGAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR CCA 90 bp | TCTGCGCTCTTCCCCTCTGGCCCTGTCTCACTGCTTTGCTCAGTAGTGATGATGGGCTCTCTTTGGGCTTaGAGTAGTCCCAGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SALFPSGPVSLLCSVVMMGSLWA*SSPRAA Trigger: GGCGGCCCTGGGACTACTCCAAGCCCAAAGAGAGCC...CATCATCACTACTGAGCAAAGCAGTGAGACAGGGCCAGAGGGGAAGAGCGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR TCA 90 bp | CCATATTCTGCGCTCTTCCCCTCTGGCCCTGTCTCACTGCTTTGCTCAGTAGTGGCAGCAGGGCTCCAATaGCCGCGAAGAAAGTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: PYSALFPSGPVSLLCSVVAAGLQ*PRRKSD Trigger: GTCAGACTTTCTTCGCGGTCATTGGAGCCCTGCTGC...CACTACTGAGCAAAGCAGTGAGACAGGGCCAGAGGGGAAGAGCGCAGAATATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR TCA 90 bp | CCCAGGAAGAGCACTGAGACACTGCTCCCATATTCTGCGCTCTTCCCCTCTGGCTGTGAGGCACCGATGTaGAAAAGACAGCCCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: PRKSTETLLPYSALFPSGCEAPM*KRQPLF Trigger: GAACAAGGGCTGTCTTTTTCACATCGGTGCCTCACA...GCCAGAGGGGAAGAGCGCAGAATATGGGAGCAGTGTCTCAGTGCTCTTCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR GCA 90 bp | CCCAGGAAGAGCACTGAGACACTGCTCCCATATTCTGCGCTCTTCCCCTCTGGCCAGCTTCTTTCTCTATaGCAAGGCTCTGACGTTTCG | + |
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Preference number: 4 (lower is better) Translates to: PRKSTETLLPYSALFPSGQLLSL*QGSDVS Trigger: CGAAACGTCAGAGCCTTGGCATAGAGAAAGAAGCTG...GCCAGAGGGGAAGAGCGCAGAATATGGGAGCAGTGTCTCAGTGCTCTTCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR GCA 90 bp | TGTCTAGTTCTAGGGCCCAGGAAGAGCACTGAGACACTGCTCCCATATTCTGCGGCACTGAGGGTCAACTaGTCCACAGCCAAGTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: CLVLGPRKSTETLLPYSAALRVN*STAKFL Trigger: CAGGAACTTGGCTGTGGAGCAGTTGACCCTCAGTGC...CGCAGAATATGGGAGCAGTGTCTCAGTGCTCTTCCTGGGCCCTAGAACTAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR GCA 90 bp | CACCTGATGTCACCTGAAAAGCACTTGTCTAGTTCTAGGGCCCAGGAAGAGCACGTCCCTGATGAACAGTaGAGCCCTTTCAGGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: HLMSPEKHLSSSRAQEEHVPDEQ*SPFRAT Trigger: AGTGGCCCTGAAAGGGCTGCACTGTTCATCAGGGAC...GTGCTCTTCCTGGGCCCTAGAACTAGACAAGTGCTTTTCAGGTGACATCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR CCA 90 bp | TCTGCGCTCTTCCCCTCTGGCCCTGTCTCACTGCTTTGCTCAGTAGTGATGATGTTGCTCTGCTCTCTTTaGGCTCTCTTTGGGCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: SALFPSGPVSLLCSVVMMLLCSL*ALFGLG Trigger: TCCAAGCCCAAAGAGAGCCCAAAGAGAGCAGAGCAA...CATCATCACTACTGAGCAAAGCAGTGAGACAGGGCCAGAGGGGAAGAGCGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR TCA 90 bp | CCCATATTCTGCGCTCTTCCCCTCTGGCCCTGTCTCACTGCTTTGCTCAGTAGTCTTCGAGAAACTGTGTaGGGCACCGATGTGAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: PIFCALPLWPCLTALLSSLRETV*GTDVKK Trigger: CTTTTTCACATCGGTGCCTCACACAGTTTCTCGAAG...ACTACTGAGCAAAGCAGTGAGACAGGGCCAGAGGGGAAGAGCGCAGAATATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR GCA 90 bp | CCATATTCTGCGCTCTTCCCCTCTGGCCCTGTCTCACTGCTTTGCTCAGTAGTGAACGCTGGTTTGCTCTaGTCTCTTTGGGCTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: PYSALFPSGPVSLLCSVVNAGLL*SLWALF Trigger: AAAGAGAGCCCAAAGAGAGCAGAGCAAACCAGCGTT...CACTACTGAGCAAAGCAGTGAGACAGGGCCAGAGGGGAAGAGCGCAGAATATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR GCA 90 bp | CACCTGATGTCACCTGAAAAGCACTTGTCTAGTTCTAGGGCCCAGGAAGAGCACTTCCCCAGGTCCCTCTaGAATCAGCTTTCTGTCACA | + |
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Preference number: 4 (lower is better) Translates to: HLMSPEKHLSSSRAQEEHFPRSL*NQLSVT Trigger: TGTGACAGAAAGCTGATTGCAGAGGGACCTGGGGAA...GTGCTCTTCCTGGGCCCTAGAACTAGACAAGTGCTTTTCAGGTGACATCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR GCA 90 bp | CCCAGGAAGAGCACTGAGACACTGCTCCCATATTCTGCGCTCTTCCCCTCTGGCGCAGCTATTGATAAATaGAGTTTTGAGAAGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: PRKSTETLLPYSALFPSGAAIDK*SFEKVQ Trigger: TTGGACCTTCTCAAAACTGCATTTATCAATAGCTGC...GCCAGAGGGGAAGAGCGCAGAATATGGGAGCAGTGTCTCAGTGCTCTTCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR GCA 90 bp | ATTACAACGAACTTCACATATGGCATGTATTTGACTACACTTCAAAGCTGGAGGCACGTGACAGACAACTaGCTCACCAGTGAGAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: ITTNFTYGMYLTTLQSWRHVTDN*LTSEKA Trigger: AGCTTTCTCACTGGTGAGGCAGTTGTCTGTCACGTG...CCTCCAGCTTTGAAGTGTAGTCAAATACATGCCATATGTGAAGTTCGTTGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS CCA 90 bp | CGGCACGGAATCCCTTCTTCACTCCCCGAACCGGAGGAGCCAGCGTaGGGACGGCCGGAGCCAATAGGCGGCGAGGGCCCTGCTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RHGIPSSLPEPEEPA*GRPEPIGGEGPAAA Trigger: TGCTGCAGCAGGGCCCTCGCCGCCTATTGGCTCCGGCCGTCCCCACGCTGGCTCCTCCGGTTCGGGGAGTGAAGAAGGGATTCCGTGCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS CCA 90 bp | GGCGGCGGCGGGCAGCGTAGCAGGCGCCATCGCTCCAGCTCTTTCTaGAAGCGGAAGGCGGCACGGAATCCCTTCTTCACTCCCCGAACC | + |
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Preference number: 5 (lower is better) Translates to: GGGGQRSRRHRSSSF*KRKAARNPFFTPRT Trigger: GGTTCGGGGAGTGAAGAAGGGATTCCGTGCCGCCTTCCGCTTCCAGAAAGAGCTGGAGCGATGGCGCCTGCTACGCTGCCCGCCGCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS GCA 90 bp | GAATCCGTACAGCTTCCTGAGGGCCACGCGCGCAGCTTCTTCCTCTaGAACGAGTACAGTTTCCCCAGGTCCCTCTGCAATCAGCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: ESVQLPEGHARSFFL*NEYSFPRSLCNQLS Trigger: AGAAAGCTGATTGCAGAGGGACCTGGGGAAACTGTACTCGTTGCAGAGGAAGAAGCTGCGCGCGTGGCCCTCAGGAAGCTGTACGGATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS TCA 90 bp | AGAAAGTCTGACGTAAGACAGGCAGGGGGACAGGAAATTCTGCACTaGGGGTCAACTGCTCCACAGCCAAGTTCCTGGCCACGTGACAGA | + |
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Preference number: 5 (lower is better) Translates to: RKSDVRQAGGQEILH*GSTAPQPSSWPRDR Trigger: TCTGTCACGTGGCCAGGAACTTGGCTGTGGAGCAGTTGACCCTCAGTGCAGAATTTCCTGTCCCCCTGCCTGTCTTACGTCAGACTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR CAA 90 bp | CCATATTCTGCGCTCTTCCCCTCTGGCCCTGTCTCACTGCTTTGCTCAGTAGTGATAAAGGCAGAGCAGTaGTGCTTCCAGACTGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: PYSALFPSGPVSLLCSVVIKAEQ*CFQTAW Trigger: CCAGGCAGTCTGGAAGCACAACTGCTCTGCCTTTAT...CACTACTGAGCAAAGCAGTGAGACAGGGCCAGAGGGGAAGAGCGCAGAATATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS TCA 90 bp | TCTGCACTGAGGGTCAACTGCTCCACAGCCAAGTTCCTGGCCACGTaGCAGACAACTGCCTCACCAGTGAGAAAGCTAACTAGACTCTCA | + |
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Preference number: 5 (lower is better) Translates to: SALRVNCSTAKFLAT*QTTASPVRKLTRLS Trigger: TGAGAGTCTAGTTAGCTTTCTCACTGGTGAGGCAGTTGTCTGTCACGTGGCCAGGAACTTGGCTGTGGAGCAGTTGACCCTCAGTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS TCA 90 bp | TGCCTTCGGCGGGCAAGTCTGGGAATTCGTCTTCGAGAAACTGTGTaGGGCACCGATGTGAAAAAGACAGCCCTTGTTCGAACAGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: CLRRASLGIRLRETV*GTDVKKTALVRTVP Trigger: AGGAACTGTTCGAACAAGGGCTGTCTTTTTCACATCGGTGCCTCACACAGTTTCTCGAAGACGAATTCCCAGACTTGCCCGCCGAAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS-3UTR CAA 90 bp | GGCCCAGGAAGAGCACTGAGACACTGCTCCCATATTCTGCGCTCTTCCCCTCTGTTGATAAATGCAGTTTaGAGAAGGTCCAACGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: GPGRALRHCSHILRSSPLLINAV*RRSNEK Trigger: CTTTTCGTTGGACCTTCTCAAAACTGCATTTATCAA...CAGAGGGGAAGAGCGCAGAATATGGGAGCAGTGTCTCAGTGCTCTTCCTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS TCA 90 bp | CAAGTCTGGGAATTCGTCTTCGAGAAACTGTGTGAGGCACCGATGTaGAAAAGACAGCCCTTGTTCGAACAGTTCCTGATTGTCCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: QVWEFVFEKLCEAPM*KRQPLFEQFLIVLK Trigger: CTTAAGGACAATCAGGAACTGTTCGAACAAGGGCTGTCTTTTTCACATCGGTGCCTCACACAGTTTCTCGAAGACGAATTCCCAGACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS TCA 90 bp | GTGAGGCACCGATGTGAAAAAGACAGCCCTTGTTCGAACAGTTCCTaGTTGTCCTTAAGATTCAGAAGAGCAGCTTCTTTCTCTATGCCA | + |
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Preference number: 5 (lower is better) Translates to: VRHRCEKDSPCSNSS*LSLRFRRAASFSMP Trigger: TGGCATAGAGAAAGAAGCTGCTCTTCTGAATCTTAAGGACAATCAGGAACTGTTCGAACAAGGGCTGTCTTTTTCACATCGGTGCCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS CCA 72 bp | ATCCCTTCTTCACTCCCCGAACCGGAGGAGCCAGCGTaGGGACGGCCGGAGCCAATAGGCGGCGAGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: IPSSLPEPEEPA*GRPEPIGGEGP Trigger: AGGGCCCTCGCCGCCTATTGGCTCCGGCCGTCCCCACGCTGGCTCCTCCGGTTCGGGGAGTGAAGAAGGGAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS CCA 72 bp | GGGCAGCGTAGCAGGCGCCATCGCTCCAGCTCTTTCTaGAAGCGGAAGGCGGCACGGAATCCCTTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: GQRSRRHRSSSF*KRKAARNPFFT Trigger: AGTGAAGAAGGGATTCCGTGCCGCCTTCCGCTTCCAGAAAGAGCTGGAGCGATGGCGCCTGCTACGCTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS CAA 90 bp | GTAAGCGAGATCCAAAGGCTTGTACCTCCGCATGGTAATCCCAGTTaGGCTTCTCTGAGCGTCGCACTGGCGGCGGCGGGCAGCGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: VSEIQRLVPPHGNPS*ASLSVALAAAGSVA Trigger: TGCTACGCTGCCCGCCGCCGCCAGTGCGACGCTCAGAGAAGCCAAACTGGGATTACCATGCGGAGGTACAAGCCTTTGGATCTCGCTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS TCA 72 bp | CCCTTTCAGGGCCACTGCTCTGCAGCAGGGCTCCAATaGCCGCGAAGAAAGTCTGACGTAAGACAGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PFQGHCSAAGLQ*PRRKSDVRQAG Trigger: CCCTGCCTGTCTTACGTCAGACTTTCTTCGCGGTCATTGGAGCCCTGCTGCAGAGCAGTGGCCCTGAAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS GCA 72 bp | CAGCTTCCTGAGGGCCACGCGCGCAGCTTCTTCCTCTaGAACGAGTACAGTTTCCCCAGGTCCCTCTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: QLPEGHARSFFL*NEYSFPRSLCN Trigger: ATTGCAGAGGGACCTGGGGAAACTGTACTCGTTGCAGAGGAAGAAGCTGCGCGCGTGGCCCTCAGGAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS CCA 72 bp | CAACGCTGGTTTGCTCTGCTCTCTTTGGGCTCTCTTTaGGCTTGGAGTAGTCCCAGGGCCGCCTGTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QRWFALLSLGSL*AWSSPRAACSL Trigger: CAGAGAACAGGCGGCCCTGGGACTACTCCAAGCCCAAAGAGAGCCCAAAGAGAGCAGAGCAAACCAGCGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS TCA 72 bp | CTCTGCAGCAGGGCTCCAATGACCGCGAAGAAAGTCTaGCGTAAGACAGGCAGGGGGACAGGAAATTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LCSRAPMTAKKV*RKTGRGTGNSA Trigger: TGCAGAATTTCCTGTCCCCCTGCCTGTCTTACGTCAGACTTTCTTCGCGGTCATTGGAGCCCTGCTGCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS TCA 72 bp | AGGGTCAACTGCTCCACAGCCAAGTTCCTGGCCACGTaGCAGACAACTGCCTCACCAGTGAGAAAGCTAACT | + |
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Preference number: 6 (lower is better) Translates to: RVNCSTAKFLAT*QTTASPVRKLT Trigger: AGTTAGCTTTCTCACTGGTGAGGCAGTTGTCTGTCACGTGGCCAGGAACTTGGCTGTGGAGCAGTTGACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS TCA 72 bp | ATAAAGGCAGAGCAGTTGTGCTTCCAGACTGCCTGGTaGGTCGAGACTCAGGAGCTGAGATGTTTCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: IKAEQLCFQTAW*VETQELRCFSS Trigger: AGAAGAGAAACATCTCAGCTCCTGAGTCTCGACTCACCAGGCAGTCTGGAAGCACAACTGCTCTGCCTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS CCA 72 bp | TGTTTCTCTTCTTCAGCTCCTCTACGAGTAGTCCCATaGGATTTACGACGGTCCACATCTCAAAGAGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: CFSSSAPLRVVP*DLRRSTSQRAL Trigger: AAGAGCTCTTTGAGATGTGGACCGTCGTAAATCCCATGGGACTACTCGTAGAGGAGCTGAAGAAGAGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS TCA 72 bp | GAATTCGTCTTCGAGAAACTGTGTGAGGCACCGATGTaGAAAAGACAGCCCTTGTTCGAACAGTTCCTGATT | + |
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Preference number: 6 (lower is better) Translates to: EFVFEKLCEAPM*KRQPLFEQFLI Trigger: AATCAGGAACTGTTCGAACAAGGGCTGTCTTTTTCACATCGGTGCCTCACACAGTTTCTCGAAGACGAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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| CDS TCA 72 bp | CGATGTGAAAAAGACAGCCCTTGTTCGAACAGTTCCTaGTTGTCCTTAAGATTCAGAAGAGCAGCTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RCEKDSPCSNSS*LSLRFRRAASF Trigger: GAAAGAAGCTGCTCTTCTGAATCTTAAGGACAATCAGGAACTGTTCGAACAAGGGCTGTCTTTTTCACATCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027464.9 |
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