Pregenerated sensors for MRPL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003299Ensembl transcript IDs: ENSMUST00000003386.7, ENSMUST00000214124.2, ENSMUST00000216175.2, ENSMUST00000216466.2, ENSMUST00000216818.2, ENSMUST00000216824.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCGCCATAAGGGAGAACGGATGCTGCCATGCCGAGCACGGCCACTaGCTTTCTGTTGCCAGGGCTTGCGGCCACCACCACTCACCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LAIRENGCCHAEHGH*LSVARACGHHHSPQ Trigger: CTGAGGTGAGTGGTGGTGGCCGCAAGCCCTGGCAACAGAAAGGCAGTGGCCGTGCTCGGCATGGCAGCATCCGTTCTCCCTTATGGCGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216466.2 |
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| 3UTR GCA 90 bp | TGGGCTACACCTCCTCCTCGCCATAAGGGAGAACGGATGCTGCCATaGCGAGCACGGCCACTGCCTTTCTGTTGCCAGGGCTTGCGGCCA | + |
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Preference number: 1 (lower is better) Translates to: WATPPPRHKGERMLP*RARPLPFCCQGLRP Trigger: TGGCCGCAAGCCCTGGCAACAGAAAGGCAGTGGCCGTGCTCGGCATGGCAGCATCCGTTCTCCCTTATGGCGAGGAGGAGGTGTAGCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216466.2 |
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| 3UTR GCA 90 bp | GGGGACCATGGGCTACACCTCCTCCTCGCCATAAGGGAGAACGGATaGTGCCATGCCGAGCACGGCCACTGCCTTTCTGTTGCCAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: GDHGLHLLLAIRENG*CHAEHGHCLSVARA Trigger: AGCCCTGGCAACAGAAAGGCAGTGGCCGTGCTCGGCATGGCAGCATCCGTTCTCCCTTATGGCGAGGAGGAGGTGTAGCCCATGGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216466.2 |
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| 3UTR CCA 90 bp | ACGGAACTCCCCCAGTGGCGGTACTGGGCCAACTCTGTCAGGTACTaGGGGTCTGCCGTGGGTAGCTCCAGGGAATCCACAATGTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: TELPQWRYWANSVRY*GSAVGSSRESTMCR Trigger: TCTACACATTGTGGATTCCCTGGAGCTACCCACGGCAGACCCCCAGTACCTGACAGAGTTGGCCCAGTACCGCCACTGGGGGAGTTCCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| 3UTR CCA 90 bp | TGTGTTAAGTCTACAAGGAGCACGGAACTCCCCCAGTGGCGGTACTaGGCCAACTCTGTCAGGTACTGGGGGTCTGCCGTGGGTAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: CVKSTRSTELPQWRY*ANSVRYWGSAVGSS Trigger: GGAGCTACCCACGGCAGACCCCCAGTACCTGACAGAGTTGGCCCAGTACCGCCACTGGGGGAGTTCCGTGCTCCTTGTAGACTTAACACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| 3UTR GCA 90 bp | TCCCAGGCAGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTTaGAACAAGGTCCAACAGCTCCCAGGGAACTGCTGTTTTTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SQAGTHLGSVQLSPP*NKVQQLPGNCCFCR Trigger: CCTGCAAAAACAGCAGTTCCCTGGGAGCTGTTGGACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTGCCTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| 3UTR GCA 90 bp | ATCATCCTGCATGAGCTTGACAGTCAAGGCCACCTTGAGGCCCAGTaGCCGCACTTTCATGGGCAACATGTAGTAGTAACTTGTAGGACC | + |
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Preference number: 1 (lower is better) Translates to: IILHELDSQGHLEAQ*PHFHGQHVVVTCRT Trigger: GGTCCTACAAGTTACTACTACATGTTGCCCATGAAAGTGCGGGCACTGGGCCTCAAGGTGGCCTTGACTGTCAAGCTCATGCAGGATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| 3UTR CAA 90 bp | ATGCTGCCATGCCGAGCACGGCCACTGCCTTTCTGTTGCCAGGGCTaGCGGCCACCACCACTCACCTCAGCCCTGGTCTTGGTGTTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: MLPCRARPLPFCCQG*RPPPLTSALVLVLA Trigger: TGCTAACACCAAGACCAGGGCTGAGGTGAGTGGTGGTGGCCGCAAGCCCTGGCAACAGAAAGGCAGTGGCCGTGCTCGGCATGGCAGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216466.2 |
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| 3UTR-3UTR CCA 90 bp | GCATCTCTTCATGTGTTAAGTCTACAAGGAGCACGGAACTCCCCCAGTGGCGGTGGACCCCGGGGACCATaGGCTACACCTCCTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ASLHVLSLQGARNSPSGGGPRGP*ATPPAG Trigger: CCCTGCAGGAGGTGTAGCCCATGGTCCCCGGGGTCC...ACCGCCACTGGGGGAGTTCCGTGCTCCTTGTAGACTTAACACATGAAGAGATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGATCCCAGGCAGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTTGCGGGAACTGCTGTTTTTaGAGGATGGCTGGGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: KRSQAGTHLGSVQLSPPCGNCCF*RMAGVL Trigger: CAGCACCCCAGCCATCCTGCAAAAACAGCAGTTCCC...GCAAGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTGCCTGGGATCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| 3UTR CAA 90 bp | ATCCCAGGCAGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTaGCAACAAGGTCCAACAGCTCCCAGGGAACTGCTGTTTTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: IPGRHSSWLCAVVPS*QQGPTAPRELLFLQ Trigger: CTGCAAAAACAGCAGTTCCCTGGGAGCTGTTGGACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTGCCTGGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| 3UTR-3UTR CCA 90 bp | CTACAAGGAGCACGGAACTCCCCCAGTGGCGGTACTGGGCCAACTCTGTCAGGTGTGCCCGCACTTTCATaGGCAACATGTAGTAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: LQGARNSPSGGTGPTLSGVPALS*ATCSSN Trigger: GTTACTACTACATGTTGCCCATGAAAGTGCGGGCAC...ACCTGACAGAGTTGGCCCAGTACCGCCACTGGGGGAGTTCCGTGCTCCTTGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| 3UTR CAA 90 bp | GGTAGCTCCAGGGAATCCACAATGTGTAGATCATCCTGCATGAGCTaGACAGTCAAGGCCACCTTGAGGCCCAGTGCCCGCACTTTCATG | + |
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Preference number: 2 (lower is better) Translates to: GSSRESTMCRSSCMS*TVKATLRPSARTFM Trigger: CATGAAAGTGCGGGCACTGGGCCTCAAGGTGGCCTTGACTGTCAAGCTCATGCAGGATGATCTACACATTGTGGATTCCCTGGAGCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| 3UTR GCA 72 bp | AGGGAGAACGGATGCTGCCATGCCGAGCACGGCCACTaGCTTTCTGTTGCCAGGGCTTGCGGCCACCACCAC | + |
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Preference number: 3 (lower is better) Translates to: RENGCCHAEHGH*LSVARACGHHH Trigger: GTGGTGGTGGCCGCAAGCCCTGGCAACAGAAAGGCAGTGGCCGTGCTCGGCATGGCAGCATCCGTTCTCCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216466.2 |
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| 3UTR CCA 72 bp | CCCCAGTGGCGGTACTGGGCCAACTCTGTCAGGTACTaGGGGTCTGCCGTGGGTAGCTCCAGGGAATCCACA | + |
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Preference number: 3 (lower is better) Translates to: PQWRYWANSVRY*GSAVGSSREST Trigger: TGTGGATTCCCTGGAGCTACCCACGGCAGACCCCCAGTACCTGACAGAGTTGGCCCAGTACCGCCACTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGCCAACTCTGTCAGGTACTGGGGGTCTGCCGTGGGTAGCTCCAGGGAATCCACAGTCAAGGCCACCTaGAGGCCCAGTGCCCGCACT | + |
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Preference number: 3 (lower is better) Translates to: WANSVRYWGSAVGSSRESTVKAT*RPSART Trigger: AGTGCGGGCACTGGGCCTCAAGGTGGCCTTGACTGT...GGATTCCCTGGAGCTACCCACGGCAGACCCCCAGTACCTGACAGAGTTGGCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| 3UTR CCA 72 bp | TCTACAAGGAGCACGGAACTCCCCCAGTGGCGGTACTaGGCCAACTCTGTCAGGTACTGGGGGTCTGCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: STRSTELPQWRY*ANSVRYWGSAV Trigger: CACGGCAGACCCCCAGTACCTGACAGAGTTGGCCCAGTACCGCCACTGGGGGAGTTCCGTGCTCCTTGTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| 3UTR GCA 72 bp | CTACACCTCCTCCTCGCCATAAGGGAGAACGGATGCTaGCATGCCGAGCACGGCCACTGCCTTTCTGTTGCC | + |
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Preference number: 3 (lower is better) Translates to: LHLLLAIRENGC*HAEHGHCLSVA Trigger: GGCAACAGAAAGGCAGTGGCCGTGCTCGGCATGGCAGCATCCGTTCTCCCTTATGGCGAGGAGGAGGTGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216466.2 |
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| 3UTR GCA 72 bp | GGGCTACACCTCCTCCTCGCCATAAGGGAGAACGGATaGTGCCATGCCGAGCACGGCCACTGCCTTTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: GLHLLLAIRENG*CHAEHGHCLSV Trigger: AACAGAAAGGCAGTGGCCGTGCTCGGCATGGCAGCATCCGTTCTCCCTTATGGCGAGGAGGAGGTGTAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216466.2 |
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| 3UTR CCA 72 bp | TGTGTTAAGTCTACAAGGAGCACGGAACTCCCCCAGTaGCGGTACTGGGCCAACTCTGTCAGGTACTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: CVKSTRSTELPQ*RYWANSVRYWG Trigger: CCCCCAGTACCTGACAGAGTTGGCCCAGTACCGCCACTGGGGGAGTTCCGTGCTCCTTGTAGACTTAACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCAGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTTGCAACAAGGTAGGGAACTGCTGTTTTaGCAGGATGGCTGGGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: PGRHSSWLCAVVPSLQQGRELLF*QDGWGA Trigger: AGCACCCCAGCCATCCTGCAAAAACAGCAGTTCCCT...ACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| 3UTR GCA 72 bp | CCTCCTTGCAACAAGGTCCAACAGCTCCCAGGGAACTaGTGTTTTTGCAGGATGGCTGGGGTGCTGACTTGG | + |
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Preference number: 3 (lower is better) Translates to: PPCNKVQQLPGN*CFCRMAGVLTW Trigger: CCAAGTCAGCACCCCAGCCATCCTGCAAAAACAGCAGTTCCCTGGGAGCTGTTGGACCTTGTTGCAAGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| 3UTR CCA 72 bp | ACTGGGCCAACTCTGTCAGGTACTGGGGGTCTGCCGTaGGTAGCTCCAGGGAATCCACAATGTGTAGATCAT | + |
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Preference number: 3 (lower is better) Translates to: TGPTLSGTGGLP*VAPGNPQCVDH Trigger: ATGATCTACACATTGTGGATTCCCTGGAGCTACCCACGGCAGACCCCCAGTACCTGACAGAGTTGGCCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| 3UTR GCA 72 bp | AAAAGAGATCCCAGGCAGGCACTCATCTTGGCTCTGTaGAGTTGTCCCCTCCTTGCAACAAGGTCCAACAGC | + |
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Preference number: 3 (lower is better) Translates to: KRDPRQALILAL*SCPLLATRSNS Trigger: GCTGTTGGACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTGCCTGGGATCTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| 3UTR GCA 72 bp | GGTAGCTCCAGGGAATCCACAATGTGTAGATCATCCTaGATGAGCTTGACAGTCAAGGCCACCTTGAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GSSRESTMCRSS*MSLTVKATLRP Trigger: GGGCCTCAAGGTGGCCTTGACTGTCAAGCTCATGCAGGATGATCTACACATTGTGGATTCCCTGGAGCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| 3UTR GCA 72 bp | CATGAGCTTGACAGTCAAGGCCACCTTGAGGCCCAGTaGCCGCACTTTCATGGGCAACATGTAGTAGTAACT | + |
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Preference number: 3 (lower is better) Translates to: HELDSQGHLEAQ*PHFHGQHVVVT Trigger: AGTTACTACTACATGTTGCCCATGAAAGTGCGGGCACTGGGCCTCAAGGTGGCCTTGACTGTCAAGCTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR GCA 90 bp | GGTACTGGGCCAACTCTGTCAGGTACTGGGGGTCTGCCGTGGGTAGCTCCAGGGCCACTGCCTTTCTGTTaGCAGGGCTTGCGGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: GTGPTLSGTGGLPWVAPGPLPFC*QGLRPP Trigger: TGGTGGCCGCAAGCCCTGGCAACAGAAAGGCAGTGG...CCCTGGAGCTACCCACGGCAGACCCCCAGTACCTGACAGAGTTGGCCCAGTACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| CDS-3UTR GCA 90 bp | ATCATCCTGCATGAGCTTGACAGTCAAGGCCACCTTGAGGCCCAGTGCCCGCACGCAAACACGTCGGGGTaGAGCTCCGCCAGGCCGATG | + |
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Preference number: 4 (lower is better) Translates to: IILHELDSQGHLEAQCPHANTSG*SSARPM Trigger: CATCGGCCTGGCGGAGCTGCACCCCGACGTGTTTGC...GTGCGGGCACTGGGCCTCAAGGTGGCCTTGACTGTCAAGCTCATGCAGGATGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR GCA 90 bp | CCCCGGGGACCATGGGCTACACCTCCTGCAGGGACAGTGGCGTATGAGGTGTTGCTCCTGAAGTTCCTCTaGCAGATGGCGACCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PRGPWATPPAGTVAYEVLLLKFL*QMATWC Trigger: GCACCAGGTCGCCATCTGGCAGAGGAACTTCAGGAG...CAACACCTCATACGCCACTGTCCCTGCAGGAGGTGTAGCCCATGGTCCCCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR TCA 90 bp | CTCCCCCAGTGGCGGTACTGGGCCAACTCTGTCAGGTACTGGGGGTCTGCCGTGAGGTGTTGGAATGGGTaGTGTTCAGTAGCTCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LPQWRYWANSVRYWGSAVRCWNG*CSVAPR Trigger: GCGAGGAGCTACTGAACATCACCCATTCCAACACCT...CACGGCAGACCCCCAGTACCTGACAGAGTTGGCCCAGTACCGCCACTGGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| CDS-3UTR GCA 90 bp | CAAGGAGCACGGAACTCCCCCAGTGGCGGTACTGGGCCAACTCTGTCAGGTACTAGGCCGATGCGCTCCTaGTCAAAGCCTCGGAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: QGARNSPSGGTGPTLSGTRPMRS*SKPRRD Trigger: GTCTCTCCGAGGCTTTGAGCAGGAGCGCATCGGCCT...AGTACCTGACAGAGTTGGCCCAGTACCGCCACTGGGGGAGTTCCGTGCTCCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| CDS-3UTR GCA 90 bp | TGTGTTAAGTCTACAAGGAGCACGGAACTCCCCCAGTGGCGGTACTGGGCCAACGCAAACACGTCGGGGTaGAGCTCCGCCAGGCCGATG | + |
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Preference number: 4 (lower is better) Translates to: CVKSTRSTELPQWRYWANANTSG*SSARPM Trigger: CATCGGCCTGGCGGAGCTGCACCCCGACGTGTTTGC...GTTGGCCCAGTACCGCCACTGGGGGAGTTCCGTGCTCCTTGTAGACTTAACACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| CDS-3UTR TCA 90 bp | GGCAGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTTGCAACAAGGTCCACCGCTAGAGAGTGGATaGCCCGGGAGCCAGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: GRHSSWLCAVVPSLQQGPPLESG*PGSQRV Trigger: GACTCTCTGGCTCCCGGGTCATCCACTCTCTAGCGG...TGGACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR GCA 90 bp | CCCCTCCTTGCAACAAGGTCCAACAGCTCCCAGGGAACTGCTGTTTTTGCAGGAGCTCCGCCAGGCCGATaGGCTCCTGCTCAAAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PLLATRSNSSQGTAVFAGAPPGR*APAQSL Trigger: GAGGCTTTGAGCAGGAGCGCATCGGCCTGGCGGAGC...TCCTGCAAAAACAGCAGTTCCCTGGGAGCTGTTGGACCTTGTTGCAAGGAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR GCA 90 bp | CAGTGCCCGCACTTTCATGGGCAACATGTAGTAGTAACTTGTAGGACCCCGGGGGCTCCGCCAGGCCGATaGGCTCCTGCTCAAAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QCPHFHGQHVVVTCRTPGAPPGR*APAQSL Trigger: GAGGCTTTGAGCAGGAGCGCATCGGCCTGGCGGAGC...CCCCGGGGTCCTACAAGTTACTACTACATGTTGCCCATGAAAGTGCGGGCACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR GCA 90 bp | CTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTTGCAACAAGGTCCAACAGCTCCGCAAACACGTCGGGGTaGAGCTCCGCCAGGCCGATG | + |
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Preference number: 4 (lower is better) Translates to: LILALCSCPLLATRSNSSANTSG*SSARPM Trigger: CATCGGCCTGGCGGAGCTGCACCCCGACGTGTTTGC...GGAGCTGTTGGACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR GCA 90 bp | GTAGTAGTAACTTGTAGGACCCCGGGGACCATGGGCTACACCTCCTCCTCGCCACAGATGGCGACCTGGTaGACAATGTCCAGCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VVVTCRTPGTMGYTSSSPQMATW*TMSSRG Trigger: GCCTCGGCTGGACATTGTGCACCAGGTCGCCATCTG...TGGCGAGGAGGAGGTGTAGCCCATGGTCCCCGGGGTCCTACAAGTTACTACTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216466.2 |
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| CDS-3UTR GCA 90 bp | CCATGGGCTACACCTCCTCCTCGCCATAAGGGAGAACGGATGCTGCCATGCCGACTCCTGAAGTTCCTCTaGCAGATGGCGACCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PWATPPPRHKGERMLPCRLLKFL*QMATWC Trigger: GCACCAGGTCGCCATCTGGCAGAGGAACTTCAGGAG...TCGGCATGGCAGCATCCGTTCTCCCTTATGGCGAGGAGGAGGTGTAGCCCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216466.2 |
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| CDS-3UTR TCA 90 bp | CAGTGCCCGCACTTTCATGGGCAACATGTAGTAGTAACTTGTAGGACCCCGGGGCCGCTAGAGAGTGGATaGCCCGGGAGCCAGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: QCPHFHGQHVVVTCRTPGPLESG*PGSQRV Trigger: GACTCTCTGGCTCCCGGGTCATCCACTCTCTAGCGG...CCCCGGGGTCCTACAAGTTACTACTACATGTTGCCCATGAAAGTGCGGGCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR TCA 90 bp | GCCCAGTGCCCGCACTTTCATGGGCAACATGTAGTAGTAACTTGTAGGACCCCGCCGCTAGAGAGTGGATaGCCCGGGAGCCAGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: AQCPHFHGQHVVVTCRTPPLESG*PGSQRV Trigger: GACTCTCTGGCTCCCGGGTCATCCACTCTCTAGCGG...CGGGGTCCTACAAGTTACTACTACATGTTGCCCATGAAAGTGCGGGCACTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR GCA 90 bp | ACTCTGTCAGGTACTGGGGGTCTGCCGTGGGTAGCTCCAGGGAATCCACAATGTCCACTGCCTTTCTGTTaGCAGGGCTTGCGGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: TLSGTGGLPWVAPGNPQCPLPFC*QGLRPP Trigger: TGGTGGCCGCAAGCCCTGGCAACAGAAAGGCAGTGG...ACATTGTGGATTCCCTGGAGCTACCCACGGCAGACCCCCAGTACCTGACAGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR GCA 90 bp | ACTTGTAGGACCCCGGGGACCATGGGCTACACCTCCTGCAGGGACAGTGGCGTATCCGGAGCTCACACTTaGGCAAAACAGGATCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: TCRTPGTMGYTSCRDSGVSGAHT*AKQDLG Trigger: TCCTAGATCCTGTTTTGCGCAAGTGTGAGCTCCGGA...TACGCCACTGTCCCTGCAGGAGGTGTAGCCCATGGTCCCCGGGGTCCTACAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR GCA 90 bp | CAACAAGGTCCAACAGCTCCCAGGGAACTGCTGTTTTTGCAGGATGGCTGGGGTAGGCCGATGCGCTCCTaGTCAAAGCCTCGGAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: QQGPTAPRELLFLQDGWGRPMRS*SKPRRD Trigger: GTCTCTCCGAGGCTTTGAGCAGGAGCGCATCGGCCT...ACCCCAGCCATCCTGCAAAAACAGCAGTTCCCTGGGAGCTGTTGGACCTTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR GCA 90 bp | CAGTGCCCGCACTTTCATGGGCAACATGTAGTAGTAACTTGTAGGACCCCGGGGCAGATGGCGACCTGGTaGACAATGTCCAGCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QCPHFHGQHVVVTCRTPGQMATW*TMSSRG Trigger: GCCTCGGCTGGACATTGTGCACCAGGTCGCCATCTG...CCCCGGGGTCCTACAAGTTACTACTACATGTTGCCCATGAAAGTGCGGGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR GCA 90 bp | GCCCAGTGCCCGCACTTTCATGGGCAACATGTAGTAGTAACTTGTAGGACCCCGCAGATGGCGACCTGGTaGACAATGTCCAGCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: AQCPHFHGQHVVVTCRTPQMATW*TMSSRG Trigger: GCCTCGGCTGGACATTGTGCACCAGGTCGCCATCTG...CGGGGTCCTACAAGTTACTACTACATGTTGCCCATGAAAGTGCGGGCACTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR GCA 90 bp | CAAAAGAGATCCCAGGCAGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTCCACTGCCTTTCTGTTaGCAGGGCTTGCGGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: QKRSQAGTHLGSVQLSPPPLPFC*QGLRPP Trigger: TGGTGGCCGCAAGCCCTGGCAACAGAAAGGCAGTGG...AGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTGCCTGGGATCTCTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR GCA 90 bp | CTCCCCCAGTGGCGGTACTGGGCCAACTCTGTCAGGTACTGGGGGTCTGCCGTGGGGATCTCAGAAATTTaGTTGATGGCTGGCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPQWRYWANSVRYWGSAVGISEI*LMAGIR Trigger: CCTTATGCCAGCCATCAAGCAAATTTCTGAGATCCC...CACGGCAGACCCCCAGTACCTGACAGAGTTGGCCCAGTACCGCCACTGGGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| CDS-3UTR CCA 90 bp | CATCTTGGCTCTGTGCAGTTGTCCCCTCCTTGCAACAAGGTCCAACAGCTCCCACCCCAGTGGCGGTACTaGGCCAACTCTGTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HLGSVQLSPPCNKVQQLPPQWRY*ANSVRY Trigger: GTACCTGACAGAGTTGGCCCAGTACCGCCACTGGGG...TGGGAGCTGTTGGACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR GCA 90 bp | CCCTCCTTGCAACAAGGTCCAACAGCTCCCAGGGAACTGCTGTTTTTGCAGGATCAGATGGCGACCTGGTaGACAATGTCCAGCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLQQGPTAPRELLFLQDQMATW*TMSSRG Trigger: GCCTCGGCTGGACATTGTGCACCAGGTCGCCATCTG...ATCCTGCAAAAACAGCAGTTCCCTGGGAGCTGTTGGACCTTGTTGCAAGGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR GCA 90 bp | CTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTTGCAACAAGGTCCAACAGCTCCCTCCTGAAGTTCCTCTaGCAGATGGCGACCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LILALCSCPLLATRSNSSLLKFL*QMATWC Trigger: GCACCAGGTCGCCATCTGGCAGAGGAACTTCAGGAG...GGAGCTGTTGGACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR CCA 90 bp | CAAAAGAGATCCCAGGCAGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTAACTCTGTCAGGTACTaGGGGTCTGCCGTGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKRSQAGTHLGSVQLSPPNSVRY*GSAVGS Trigger: GCTACCCACGGCAGACCCCCAGTACCTGACAGAGTT...AGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTGCCTGGGATCTCTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| 3UTR CAA 72 bp | AGATCCCAGGCAGGCACTCATCTTGGCTCTGTGCAGTaGTCCCCTCCTTGCAACAAGGTCCAACAGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSQAGTHLGSVQ*SPPCNKVQQLP Trigger: TGGGAGCTGTTGGACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTGCCTGGGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR GCA 90 bp | TGGGCATCTCTTCATGTGTTAAGTCTACAAGGAGCACGGAACTCCCCCAGTGGCCTCCTGAAGTTCCTCTaGCAGATGGCGACCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WASLHVLSLQGARNSPSGLLKFL*QMATWC Trigger: GCACCAGGTCGCCATCTGGCAGAGGAACTTCAGGAG...GCCACTGGGGGAGTTCCGTGCTCCTTGTAGACTTAACACATGAAGAGATGCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| 3UTR CAA 72 bp | AGATCATCCTGCATGAGCTTGACAGTCAAGGCCACCTaGAGGCCCAGTGCCCGCACTTTCATGGGCAACATG | + |
|
Preference number: 4 (lower is better) Translates to: RSSCMSLTVKAT*RPSARTFMGNM Trigger: CATGTTGCCCATGAAAGTGCGGGCACTGGGCCTCAAGGTGGCCTTGACTGTCAAGCTCATGCAGGATGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| 3UTR CAA 72 bp | AGGGAATCCACAATGTGTAGATCATCCTGCATGAGCTaGACAGTCAAGGCCACCTTGAGGCCCAGTGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RESTMCRSSCMS*TVKATLRPSAR Trigger: GCGGGCACTGGGCCTCAAGGTGGCCTTGACTGTCAAGCTCATGCAGGATGATCTACACATTGTGGATTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR GCA 90 bp | ACAAAAGAGATCCCAGGCAGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTCCGGAGCTCACACTTaGGCAAAACAGGATCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKEIPGRHSSWLCAVVPSSGAHT*AKQDLG Trigger: TCCTAGATCCTGTTTTGCGCAAGTGTGAGCTCCGGA...GGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTGCCTGGGATCTCTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR GCA 90 bp | CATGGGCAACATGTAGTAGTAACTTGTAGGACCCCGGGGACCATGGGCTACACCTCCGGAGCTCACACTTaGGCAAAACAGGATCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGQHVVVTCRTPGTMGYTSGAHT*AKQDLG Trigger: TCCTAGATCCTGTTTTGCGCAAGTGTGAGCTCCGGA...GGTGTAGCCCATGGTCCCCGGGGTCCTACAAGTTACTACTACATGTTGCCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR GCA 90 bp | CAAAAGAGATCCCAGGCAGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTGTGTATCTTGAGTCCTaGCAGAGTAGCTTGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKRSQAGTHLGSVQLSPPVYLES*QSSLSS Trigger: GGAGGACAAGCTACTCTGGCAGGACTCAAGATACAC...AGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTGCCTGGGATCTCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR CCA 90 bp | AGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTTGCAACAAGGTCCAACAGTGAGGACCAGAGTCTaGTGCTTGAGCATGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RHSSWLCAVVPSLQQGPTVRTRV*CLSMLY Trigger: GTACAGCATGCTCAAGCACCAGACTCTGGTCCTCAC...TGTTGGACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR TCA 90 bp | CCTTGCAACAAGGTCCAACAGCTCCCAGGGAACTGCTGTTTTTGCAGGATGGCTCCAGAGTCTGGTGCTTaGGCATGCTGTACACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PCNKVQQLPGNCCFCRMAPESGA*ACCTHS Trigger: TGAATGTGTACAGCATGCTCAAGCACCAGACTCTGG...AGCCATCCTGCAAAAACAGCAGTTCCCTGGGAGCTGTTGGACCTTGTTGCAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR TCA 90 bp | TTTCATGGGCAACATGTAGTAGTAACTTGTAGGACCCCGGGGACCATGGGCTACCACTCACGATTCTCCTaGAGTTCCTCTGCCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: FHGQHVVVTCRTPGTMGYHSRFS*SSSARW Trigger: CCATCTGGCAGAGGAACTTCAGGAGAATCGTGAGTG...GTAGCCCATGGTCCCCGGGGTCCTACAAGTTACTACTACATGTTGCCCATGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216466.2 |
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| CDS-3UTR GCA 90 bp | CCTCCTTGCAACAAGGTCCAACAGCTCCCAGGGAACTGCTGTTTTTGCAGGATGAGGACCAGAGTCTGGTaGTTGAGCATGCTGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: PPCNKVQQLPGNCCFCRMRTRVW*LSMLYT Trigger: TGTGTACAGCATGCTCAAGCACCAGACTCTGGTCCT...CATCCTGCAAAAACAGCAGTTCCCTGGGAGCTGTTGGACCTTGTTGCAAGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR CCA 90 bp | CAAAAGAGATCCCAGGCAGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTGTGCCCGCACTTTCATaGGCAACATGTAGTAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QKRSQAGTHLGSVQLSPPVPALS*ATCSSN Trigger: GTTACTACTACATGTTGCCCATGAAAGTGCGGGCAC...AGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTGCCTGGGATCTCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR CCA 90 bp | ACTCTGTCAGGTACTGGGGGTCTGCCGTGGGTAGCTCCAGGGAATCCACAATGTAATTTGCTTGATGGCTaGCATAAGGTGTTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: TLSGTGGLPWVAPGNPQCNLLDG*HKVLEW Trigger: CCATTCCAACACCTTATGCCAGCCATCAAGCAAATT...ACATTGTGGATTCCCTGGAGCTACCCACGGCAGACCCCCAGTACCTGACAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| CDS-3UTR GCA 90 bp | CTTGAGGCCCAGTGCCCGCACTTTCATGGGCAACATGTAGTAGTAACTTGTAGGGGGATCTCAGAAATTTaGTTGATGGCTCCTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEAQCPHFHGQHVVVTCRGISEI*LMAPRH Trigger: ATGGCGAGGAGCCATCAAGCAAATTTCTGAGATCCC...CCTACAAGTTACTACTACATGTTGCCCATGAAAGTGCGGGCACTGGGCCTCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216824.2 |
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| CDS GCA 90 bp | CCGATGCGCTCCTGCTCAAAGCCTCGGAGAGACTCGACCCAGGCTTaGACCGGACGCCGGTGCACTGGGATCCGGAGCTCACACTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PMRSCSKPRRDSTQA*TGRRCTGIRSSHLR Trigger: GCGCAAGTGTGAGCTCCGGATCCCAGTGCACCGGCGTCCGGTGCAAGCCTGGGTCGAGTCTCTCCGAGGCTTTGAGCAGGAGCGCATCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216818.2 ENSMUST00000216824.2 |
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| CDS GCA 90 bp | GTTGCAAACACGTCGGGGTGCAGCTCCGCCAGGCCGATGCGCTCCTaGTCAAAGCCTCGGAGAGACTCGACCCAGGCTTGCACCGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: VANTSGCSSARPMRS*SKPRRDSTQACTGR Trigger: GCGTCCGGTGCAAGCCTGGGTCGAGTCTCTCCGAGGCTTTGAGCAGGAGCGCATCGGCCTGGCGGAGCTGCACCCCGACGTGTTTGCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216818.2 ENSMUST00000216824.2 |
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| CDS GCA 90 bp | GAGGCGCCGTTGCAAACACGTCGGGGTGCAGCTCCGCCAGGCCGATaGGCTCCTGCTCAAAGCCTCGGAGAGACTCGACCCAGGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EAPLQTRRGAAPPGR*APAQSLGETRPRLA Trigger: TGCAAGCCTGGGTCGAGTCTCTCCGAGGCTTTGAGCAGGAGCGCATCGGCCTGGCGGAGCTGCACCCCGACGTGTTTGCAACGGCGCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216818.2 ENSMUST00000216824.2 |
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| CDS GCA 90 bp | TGGTGCACAATGTCCAGCCGAGGCGCCGTTGCAAACACGTCGGGGTaGAGCTCCGCCAGGCCGATGCGCTCCTGCTCAAAGCCTCGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WCTMSSRGAVANTSG*SSARPMRSCSKPRR Trigger: TCTCCGAGGCTTTGAGCAGGAGCGCATCGGCCTGGCGGAGCTGCACCCCGACGTGTTTGCAACGGCGCCTCGGCTGGACATTGTGCACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS GCA 90 bp | TTCATGGTAAGACTCCACCGAGGCGCCGTTGCAAACACGTCGGGGTaGAGCTCCGCCAGGCCGATGCGCTCCTGCTCAAAGCCTCGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FMVRLHRGAVANTSG*SSARPMRSCSKPRR Trigger: TCTCCGAGGCTTTGAGCAGGAGCGCATCGGCCTGGCGGAGCTGCACCCCGACGTGTTTGCAACGGCGCCTCGGTGGAGTCTTACCATGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216818.2 |
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| CDS GCA 90 bp | AATGTCCAGCCTGTACTTCATGGTAAGACTCCACCGAGGCGCCGTTaGAAACACGTCGGGGTGCAGCTCCGCCAGGCCGATGCGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NVQPVLHGKTPPRRR*KHVGVQLRQADALL Trigger: CAGGAGCGCATCGGCCTGGCGGAGCTGCACCCCGACGTGTTTGCAACGGCGCCTCGGTGGAGTCTTACCATGAAGTACAGGCTGGACATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216818.2 |
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| CDS-3UTR CAA 90 bp | TCCTGCATGAGCTTGACAGTCAAGGCCACCTTGAGGCCCAGTGCCCGCACTTTCGCCACTGCCTTTCTGTaGCCAGGGCTTGCGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: SCMSLTVKATLRPSARTFATAFL*PGLAAT Trigger: GGTGGCCGCAAGCCCTGGCAACAGAAAGGCAGTGGC...GAAAGTGCGGGCACTGGGCCTCAAGGTGGCCTTGACTGTCAAGCTCATGCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS-3UTR CAA 90 bp | ATCATCCTGCATGAGCTTGACAGTCAAGGCCACCTTGAGGCCCAGTGCCCGCACGCCACTGCCTTTCTGTaGCCAGGGCTTGCGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: IILHELDSQGHLEAQCPHATAFL*PGLAAT Trigger: GGTGGCCGCAAGCCCTGGCAACAGAAAGGCAGTGGC...GTGCGGGCACTGGGCCTCAAGGTGGCCTTGACTGTCAAGCTCATGCAGGATGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS GCA 90 bp | TCAAAGCCTCGGAGAGACTCGACCCAGGCTTGCACCGGACGCCGGTaGACTGGGATCCGGAGCTCACACTTGCGCAAAACAGGATCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKPRRDSTQACTGRR*TGIRSSHLRKTGSR Trigger: CCTAGATCCTGTTTTGCGCAAGTGTGAGCTCCGGATCCCAGTGCACCGGCGTCCGGTGCAAGCCTGGGTCGAGTCTCTCCGAGGCTTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216818.2 ENSMUST00000216824.2 |
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| CDS GCA 90 bp | ATTTGCTTGATGGCTCCTCGCCATAAGGGAGAACGGATGCTGCCATaGCGAGCACGGCCACTGCCTTTCTGTTGCCAGGGCTTGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ICLMAPRHKGERMLP*RARPLPFCCQGLRP Trigger: TGGCCGCAAGCCCTGGCAACAGAAAGGCAGTGGCCGTGCTCGGCATGGCAGCATCCGTTCTCCCTTATGGCGAGGAGCCATCAAGCAAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216824.2 |
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| CDS TCA 90 bp | ACCCCGGGGACCATGGGCTACACCTCCTGCAGGGACAGTGGCGTATaGGGTGTTGGTGTCACCGCTGGTCTGGGATCTCAGAAATTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TPGTMGYTSCRDSGV*GVGVTAGLGSQKFA Trigger: AGCAAATTTCTGAGATCCCAGACCAGCGGTGACACCAACACCTCATACGCCACTGTCCCTGCAGGAGGTGTAGCCCATGGTCCCCGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214124.2 |
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| CDS CCA 90 bp | TTGTCCTCCAGGAAGGCGACGGAAGGCAGGGTGAGGACCAGAGTCTaGTGCTTGAGCATGCTGTACACATTCAGGCCAACTGCGGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LSSRKATEGRVRTRV*CLSMLYTFRPTAGI Trigger: GATCCCCGCAGTTGGCCTGAATGTGTACAGCATGCTCAAGCACCAGACTCTGGTCCTCACCCTGCCTTCCGTCGCCTTCCTGGAGGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR CAA 90 bp | TGTGACAAAAGAGATCCCAGGCAGGCACTCATCTTGGCTCTGTGCAGTTGTCCCGCCACTGCCTTTCTGTaGCCAGGGCTTGCGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: CDKRDPRQALILALCSCPATAFL*PGLAAT Trigger: GGTGGCCGCAAGCCCTGGCAACAGAAAGGCAGTGGC...GGGACAACTGCACAGAGCCAAGATGAGTGCCTGCCTGGGATCTCTTTTGTCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR CAA 90 bp | ATCTTGGCTCTGTGCAGTTGTCCCCTCCTTGCAACAAGGTCCAACAGCTCCCAGACAGTCAAGGCCACCTaGAGGCCCAGTGCCCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ILALCSCPLLATRSNSSQTVKAT*RPSART Trigger: AGTGCGGGCACTGGGCCTCAAGGTGGCCTTGACTGT...CTGGGAGCTGTTGGACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR CAA 90 bp | CCCCAGTGGCGGTACTGGGCCAACTCTGTCAGGTACTGGGGGTCTGCCGTGGGTTGGGATCTCAGAAATTaGCTTGATGGCTGGCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: PQWRYWANSVRYWGSAVGWDLRN*LDGWHK Trigger: CTTATGCCAGCCATCAAGCAAATTTCTGAGATCCCA...ACCCACGGCAGACCCCCAGTACCTGACAGAGTTGGCCCAGTACCGCCACTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| CDS-3UTR CAA 90 bp | AGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTTGCAACAAGGTCCAACATCCTGCCAGAGTAGCTaGTCCTCCAGGAAGGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: RHSSWLCAVVPSLQQGPTSCQSS*SSRKAT Trigger: CGTCGCCTTCCTGGAGGACAAGCTACTCTGGCAGGA...TGTTGGACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS CCA 90 bp | GACCATGGGCTACACCTCCTGCAGGGACAGTGGCGTATGAGGTGTTaGTGTCACCGCTGGTCTGGGATCTCAGAAATTTGCTTGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DHGLHLLQGQWRMRC*CHRWSGISEICLMA Trigger: AGCCATCAAGCAAATTTCTGAGATCCCAGACCAGCGGTGACACCAACACCTCATACGCCACTGTCCCTGCAGGAGGTGTAGCCCATGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214124.2 |
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| CDS CCA 90 bp | CCTGCAGGGACAGTGGCGTATGAGGTGTTGGTGTCACCGCTGGTCTaGGATCTCAGAAATTTGCTTGATGGCTGGCATAAGGTGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PAGTVAYEVLVSPLV*DLRNLLDGWHKVLE Trigger: TTCCAACACCTTATGCCAGCCATCAAGCAAATTTCTGAGATCCCAGACCAGCGGTGACACCAACACCTCATACGCCACTGTCCCTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214124.2 |
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| CDS-3UTR CAA 90 bp | CAGGCACTCATCTTGGCTCTGTGCAGTTGTCCCCTCCTTGCAACAAGGTCCAACACCAGAGTCTGGTGCTaGAGCATGCTGTACACATTC | + |
|
Preference number: 5 (lower is better) Translates to: QALILALCSCPLLATRSNTRVWC*SMLYTF Trigger: GAATGTGTACAGCATGCTCAAGCACCAGACTCTGGT...GTTGGACCTTGTTGCAAGGAGGGGACAACTGCACAGAGCCAAGATGAGTGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS-3UTR CAA 90 bp | CATGGGCAACATGTAGTAGTAACTTGTAGGACCCCGGGGACCATGGGCTACACCTGGGATCTCAGAAATTaGCTTGATGGCTCCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HGQHVVVTCRTPGTMGYTWDLRN*LDGSSP Trigger: TGGCGAGGAGCCATCAAGCAAATTTCTGAGATCCCA...GGTGTAGCCCATGGTCCCCGGGGTCCTACAAGTTACTACTACATGTTGCCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216824.2 |
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| CDS TCA 90 bp | ATCTCAGAAATTTGCTTGATGGCTGGCATAAGGTGTTGGAATGGGTaGTGTTCAGTAGCTCCTCGCCATAAGGGAGAACGGATGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ISEICLMAGIRCWNG*CSVAPRHKGERMLP Trigger: TGGCAGCATCCGTTCTCCCTTATGGCGAGGAGCTACTGAACATCACCCATTCCAACACCTTATGCCAGCCATCAAGCAAATTTCTGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| CDS CAA 72 bp | TGGCGACCTGGTGCACAATGTCCAGCCGAGGCGCCGTaGCAAACACGTCGGGGTGCAGCTCCGCCAGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: WRPGAQCPAEAP*QTRRGAAPPGR Trigger: TCGGCCTGGCGGAGCTGCACCCCGACGTGTTTGCAACGGCGCCTCGGCTGGACATTGTGCACCAGGTCGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS CAA 90 bp | GCCGATGCGCTCCTGCTCAAAGCCTCGGAGAGACTCGACCCAGGCTaGCACCGGACGCCGGTGCACTGGGATCCGGAGCTCACACTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: ADALLLKASERLDPG*HRTPVHWDPELTLA Trigger: CGCAAGTGTGAGCTCCGGATCCCAGTGCACCGGCGTCCGGTGCAAGCCTGGGTCGAGTCTCTCCGAGGCTTTGAGCAGGAGCGCATCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216818.2 ENSMUST00000216824.2 |
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| CDS GCA 72 bp | ATGTCCAGCCGAGGCGCCGTTGCAAACACGTCGGGGTaGAGCTCCGCCAGGCCGATGCGCTCCTGCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: MSSRGAVANTSG*SSARPMRSCSK Trigger: CTTTGAGCAGGAGCGCATCGGCCTGGCGGAGCTGCACCCCGACGTGTTTGCAACGGCGCCTCGGCTGGACAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216824.2 |
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| CDS GCA 72 bp | AGACTCCACCGAGGCGCCGTTGCAAACACGTCGGGGTaGAGCTCCGCCAGGCCGATGCGCTCCTGCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RLHRGAVANTSG*SSARPMRSCSK Trigger: CTTTGAGCAGGAGCGCATCGGCCTGGCGGAGCTGCACCCCGACGTGTTTGCAACGGCGCCTCGGTGGAGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216818.2 |
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| CDS CAA 72 bp | CTCCTGCTCAAAGCCTCGGAGAGACTCGACCCAGGCTaGCACCGGACGCCGGTGCACTGGGATCCGGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLLKASERLDPG*HRTPVHWDPEL Trigger: GAGCTCCGGATCCCAGTGCACCGGCGTCCGGTGCAAGCCTGGGTCGAGTCTCTCCGAGGCTTTGAGCAGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216818.2 ENSMUST00000216824.2 |
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| CDS GCA 72 bp | TCCTGCTCAAAGCCTCGGAGAGACTCGACCCAGGCTTaGACCGGACGCCGGTGCACTGGGATCCGGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SCSKPRRDSTQA*TGRRCTGIRSS Trigger: TGAGCTCCGGATCCCAGTGCACCGGCGTCCGGTGCAAGCCTGGGTCGAGTCTCTCCGAGGCTTTGAGCAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216818.2 ENSMUST00000216824.2 |
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| CDS CCA 72 bp | CCCGGGGACCATGGGCTACACCTCCTGCAGGGACAGTaGCGTATGAGGTGTTGGTGTCACCGCTGGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PGDHGLHLLQGQ*RMRCWCHRWSG Trigger: CCCAGACCAGCGGTGACACCAACACCTCATACGCCACTGTCCCTGCAGGAGGTGTAGCCCATGGTCCCCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214124.2 |
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| CDS GCA 72 bp | CGGAGAGACTCGACCCAGGCTTGCACCGGACGCCGGTaGACTGGGATCCGGAGCTCACACTTGCGCAAAACA | + |
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Preference number: 6 (lower is better) Translates to: RRDSTQACTGRR*TGIRSSHLRKT Trigger: TGTTTTGCGCAAGTGTGAGCTCCGGATCCCAGTGCACCGGCGTCCGGTGCAAGCCTGGGTCGAGTCTCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216818.2 ENSMUST00000216824.2 |
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| CDS CCA 72 bp | AGACTCGACCCAGGCTTGCACCGGACGCCGGTGCACTaGGATCCGGAGCTCACACTTGCGCAAAACAGGATC | + |
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Preference number: 6 (lower is better) Translates to: RLDPGLHRTPVH*DPELTLAQNRI Trigger: GATCCTGTTTTGCGCAAGTGTGAGCTCCGGATCCCAGTGCACCGGCGTCCGGTGCAAGCCTGGGTCGAGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216818.2 ENSMUST00000216824.2 |
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| CDS GCA 72 bp | CCGGACGCCGGTGCACTGGGATCCGGAGCTCACACTTaGGCAAAACAGGATCTAGGAGACCAGCGCTATCTC | + |
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Preference number: 6 (lower is better) Translates to: PDAGALGSGAHT*AKQDLGDQRYL Trigger: GAGATAGCGCTGGTCTCCTAGATCCTGTTTTGCGCAAGTGTGAGCTCCGGATCCCAGTGCACCGGCGTCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 ENSMUST00000216175.2 ENSMUST00000216818.2 ENSMUST00000216824.2 |
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| CDS TCA 72 bp | ACCATGGGCTACACCTCCTGCAGGGACAGTGGCGTATaGGGTGTTGGTGTCACCGCTGGTCTGGGATCTCAG | + |
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Preference number: 6 (lower is better) Translates to: TMGYTSCRDSGV*GVGVTAGLGSQ Trigger: CTGAGATCCCAGACCAGCGGTGACACCAACACCTCATACGCCACTGTCCCTGCAGGAGGTGTAGCCCATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214124.2 |
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| CDS CAA 90 bp | GGAAGTCACTGTAGGGCAAGCGGAAGGGGTAGAGCGGAGTGTATCTaGAGTCCTGCCAGAGTAGCTTGTCCTCCAGGAAGGCGACGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GSHCRASGRGRAECI*SPARVACPPGRRRK Trigger: CTTCCGTCGCCTTCCTGGAGGACAAGCTACTCTGGCAGGACTCAAGATACACTCCGCTCTACCCCTTCCGCTTGCCCTACAGTGACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS CAA 90 bp | GGACCATGGGCTACACCTCCTGCAGGGACAGTGGCGTATGAGGTGTaGGTGTCACCGCTGGTCTGGGATCTCAGAAATTTGCTTGATGGC | + |
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Preference number: 6 (lower is better) Translates to: GPWATPPAGTVAYEV*VSPLVWDLRNLLDG Trigger: GCCATCAAGCAAATTTCTGAGATCCCAGACCAGCGGTGACACCAACACCTCATACGCCACTGTCCCTGCAGGAGGTGTAGCCCATGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214124.2 |
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| CDS CCA 72 bp | AGGAAGGCGACGGAAGGCAGGGTGAGGACCAGAGTCTaGTGCTTGAGCATGCTGTACACATTCAGGCCAACT | + |
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Preference number: 6 (lower is better) Translates to: RKATEGRVRTRV*CLSMLYTFRPT Trigger: AGTTGGCCTGAATGTGTACAGCATGCTCAAGCACCAGACTCTGGTCCTCACCCTGCCTTCCGTCGCCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS CAA 72 bp | TGTAGGGCAAGCGGAAGGGGTAGAGCGGAGTGTATCTaGAGTCCTGCCAGAGTAGCTTGTCCTCCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: CRASGRGRAECI*SPARVACPPGR Trigger: CCTTCCTGGAGGACAAGCTACTCTGGCAGGACTCAAGATACACTCCGCTCTACCCCTTCCGCTTGCCCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003386.7 |
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| CDS CCA 72 bp | CTACACCTCCTGCAGGGACAGTGGCGTATGAGGTGTTaGTGTCACCGCTGGTCTGGGATCTCAGAAATTTGC | + |
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Preference number: 6 (lower is better) Translates to: LHLLQGQWRMRC*CHRWSGISEIC Trigger: GCAAATTTCTGAGATCCCAGACCAGCGGTGACACCAACACCTCATACGCCACTGTCCCTGCAGGAGGTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214124.2 |
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| CDS CAA 72 bp | ACATTCAGGCCAACTGCGGGGATCAGGTTGAAACTGTaGAGCCCTGAAGTGGCTGCCACGACATTCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: TFRPTAGIRLKL*SPEVAATTFLG Trigger: GCCCAAGAATGTCGTGGCAGCCACTTCAGGGCTCAACAGTTTCAACCTGATCCCCGCAGTTGGCCTGAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 |
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| CDS CAA 72 bp | GCTACACCTCCTGCAGGGACAGTGGCGTATGAGGTGTaGGTGTCACCGCTGGTCTGGGATCTCAGAAATTTG | + |
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Preference number: 6 (lower is better) Translates to: ATPPAGTVAYEV*VSPLVWDLRNL Trigger: CAAATTTCTGAGATCCCAGACCAGCGGTGACACCAACACCTCATACGCCACTGTCCCTGCAGGAGGTGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214124.2 |
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| CDS CAA 90 bp | TGCTTGAGCATGCTGTACACATTCAGGCCAACTGCGGGGATCAGGTaGAAACTGTTGAGCCCTGAAGTGGCTGCCACGACATTCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: CLSMLYTFRPTAGIR*KLLSPEVAATTFLG Trigger: GCCCAAGAATGTCGTGGCAGCCACTTCAGGGCTCAACAGTTTCAACCTGATCCCCGCAGTTGGCCTGAATGTGTACAGCATGCTCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 |
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| CDS GCA 72 bp | ATTCTCCTGAAGTTCCTCTGCCAGATGGCGACCTGGTaGACAATGTCCAGCCTGTACTTCATGGTAAGACTC | + |
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Preference number: 6 (lower is better) Translates to: ILLKFLCQMATW*TMSSLYFMVRL Trigger: GAGTCTTACCATGAAGTACAGGCTGGACATTGTGCACCAGGTCGCCATCTGGCAGAGGAACTTCAGGAGAAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216818.2 |
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| CDS CCA 72 bp | ACAGTGGCGTATGAGGTGTTGGTGTCACCGCTGGTCTaGGATCTCAGAAATTTGCTTGATGGCTGGCATAAG | + |
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Preference number: 6 (lower is better) Translates to: TVAYEVLVSPLV*DLRNLLDGWHK Trigger: CTTATGCCAGCCATCAAGCAAATTTCTGAGATCCCAGACCAGCGGTGACACCAACACCTCATACGCCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214124.2 |
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| CDS CCA 72 bp | CTGATTCTCCTGAAGTTCCTCTGCCAGATGGCGACCTaGTGCACAATGTCCAGCCTGTACTTCATGGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: LILLKFLCQMAT*CTMSSLYFMVR Trigger: TCTTACCATGAAGTACAGGCTGGACATTGTGCACCAGGTCGCCATCTGGCAGAGGAACTTCAGGAGAATCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216818.2 |
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| CDS CAA 72 bp | GTGTTGGTGTCACCGCTGGTCTGGGATCTCAGAAATTaGCTTGATGGCTGGCATAAGGTGTTGGAATGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VLVSPLVWDLRN*LDGWHKVLEWV Trigger: CACCCATTCCAACACCTTATGCCAGCCATCAAGCAAATTTCTGAGATCCCAGACCAGCGGTGACACCAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214124.2 |
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| CDS CAA 90 bp | GCGTATGAGGTGTTGGTGTCACCGCTGGTCTGGGATCTCAGAAATTaGCTTGATGGCTGGCATAAGGTGTTGGAATGGGTGATGTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: AYEVLVSPLVWDLRN*LDGWHKVLEWVMFS Trigger: ACTGAACATCACCCATTCCAACACCTTATGCCAGCCATCAAGCAAATTTCTGAGATCCCAGACCAGCGGTGACACCAACACCTCATACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214124.2 |
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| CDS TCA 72 bp | ATTTGCTTGATGGCTGGCATAAGGTGTTGGAATGGGTaGTGTTCAGTAGCTCCTCGCCATAAGGGAGAACGG | + |
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Preference number: 6 (lower is better) Translates to: ICLMAGIRCWNG*CSVAPRHKGER Trigger: CCGTTCTCCCTTATGGCGAGGAGCTACTGAACATCACCCATTCCAACACCTTATGCCAGCCATCAAGCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216175.2 |
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| CDS CCA 72 bp | CCGCTGGTCTGGGATCTCAGAAATTTGCTTGATGGCTaGCATAAGGTGTTGGAATGGGTGATGTTCAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PLVWDLRNLLDG*HKVLEWVMFSS Trigger: GCTACTGAACATCACCCATTCCAACACCTTATGCCAGCCATCAAGCAAATTTCTGAGATCCCAGACCAGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214124.2 ENSMUST00000216175.2 |
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| CDS CAA 90 bp | ATCAGGTTGAAACTGTTGAGCCCTGAAGTGGCTGCCACGACATTCTaGGGCATCTCTTCATGTGTTAAGTCTACAAGGAGCACGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: IRLKLLSPEVAATTF*GISSCVKSTRSTEL Trigger: GAGTTCCGTGCTCCTTGTAGACTTAACACATGAAGAGATGCCCAAGAATGTCGTGGCAGCCACTTCAGGGCTCAACAGTTTCAACCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 |
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| CDS CAA 72 bp | AAACTGTTGAGCCCTGAAGTGGCTGCCACGACATTCTaGGGCATCTCTTCATGTGTTAAGTCTACAAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: KLLSPEVAATTF*GISSCVKSTRS Trigger: GCTCCTTGTAGACTTAACACATGAAGAGATGCCCAAGAATGTCGTGGCAGCCACTTCAGGGCTCAACAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003386.7 ENSMUST00000214124.2 |
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