Pregenerated sensors for MRPL37 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028622Ensembl transcript IDs: ENSMUST00000030365.6
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGACATaGGCTCTTCTGAGGCAGGAAGGTAGTAGGGCACCA | + |
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Preference number: 3 (lower is better) Translates to: GSPRLQHHRPRT*ALLRQEGSRAP Trigger: TGGTGCCCTACTACCTTCCTGCCTCAGAAGAGCTCATGTCCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| 3UTR CCA 72 bp | ATACTAAGACTTTATTTCCATAGAGACACCAGACCGTaGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACCA | + |
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Preference number: 3 (lower is better) Translates to: ILRLYFHRDTRP*ESGRLAQAPAP Trigger: TGGTGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCTGGTGTCTCTATGGAAATAAAGTCTTAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR CCA 90 bp | AGACACCAGACCGTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACCACCGTCGCTCGGGCTTCCGCGTaGAGCGCACGCCCCACTCAT | + |
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Preference number: 4 (lower is better) Translates to: RHQTVGEWKARPGSSTTVARASA*SARPTH Trigger: ATGAGTGGGGCGTGCGCTCCACGCGGAAGCCCGAGC...GACGGTGGTGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCTGGTGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR CCA 90 bp | CCAGACCGTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGCGCGGTTCCAGGTGGTaGCTAAGGTGCAGTTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PDRGRVEGSPRLQHHRPRRGSRW*LRCSFG Trigger: CCCAAAACTGCACCTTAGCCACCACCTGGAACCGCG...CCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR GCA 90 bp | CAGACCGTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGAAGACACGGCCATCAGTaGCCACGCTCTGCACGACTA | + |
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Preference number: 4 (lower is better) Translates to: QTVGEWKARPGSSTTVPGRHGHQ*PRSARL Trigger: TAGTCGTGCAGAGCGTGGGCACTGATGGCCGTGTCT...TCCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR CCA 90 bp | AGGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGACATGAGCTCTTCTGAGGCATCCCATAGAGGAGCCTaGCCTGGGCCAGGGCATTTG | + |
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Preference number: 4 (lower is better) Translates to: RLAQAPAPPSQDMSSSEASHRGA*PGPGHL Trigger: CAAATGCCCTGGCCCAGGCCAGGCTCCTCTATGGGA...TGCCTCAGAAGAGCTCATGTCCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR GCA 90 bp | CAGACCGTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGACTGGGCCAGGGCATTTaGGAAAGCAAACAGGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: QTVGEWKARPGSSTTVPGLGQGI*ESKQEH Trigger: ATGCTCCTGTTTGCTTTCGCAAATGCCCTGGCCCAG...TCCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR TCA 90 bp | AGGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGACATGAGCTCTTCTGAGGCAGCCGGGCATGGGAGATaGTATCCAAAACACGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: RLAQAPAPPSQDMSSSEAAGHGR*YPKHAV Trigger: AACAGCGTGTTTTGGATATCATCTCCCATGCCCGGC...TGCCTCAGAAGAGCTCATGTCCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR GCA 90 bp | TCCATAGAGACACCAGACCGTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACGTAAGCCAGAGAGCCTaGTTCATCCCCTCCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SIETPDRGRVEGSPRLQHVSQRA*FIPSRS Trigger: ACTCCTGGAGGGGATGAAGCAGGCTCTCTGGCTTAC...GTGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCTGGTGTCTCTATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR GCA 90 bp | TCCATAGAGACACCAGACCGTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACAGGTGGTGGCTAAGGTaGAGTTTTGGGCAGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SIETPDRGRVEGSPRLQHRWWLR*SFGQRS Trigger: GGACCTCTGCCCAAAACTGCACCTTAGCCACCACCT...GTGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCTGGTGTCTCTATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR CCA 90 bp | AGGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGACATGAGCTCTTCTGAGGCAGCTCTGCACGACTATTaGCTGCTCCAAGACTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: RLAQAPAPPSQDMSSSEAALHDY*LLQDFG Trigger: GCCAAAGTCTTGGAGCAGCCAATAGTCGTGCAGAGC...TGCCTCAGAAGAGCTCATGTCCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR CCA 90 bp | GGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGACATGAGCTCGCTGTCCACAATGAGTaGGCAGTAAGTCTCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GEWKARPGSSTTVPGHELAVHNE*AVSLSL Trigger: AAGAGAGAGACTTACTGCCCACTCATTGTGGACAGC...GAGCTCATGTCCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCCTTCCACTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR CCA 90 bp | GAGAGTGGAAGGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGACATGAGCTCTAGTAAGTCTCTCTCTTaGGGATGTCCTCAGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: ESGRLAQAPAPPSQDMSSSKSLS*GCPQWS Trigger: ACTCCACTGAGGACATCCCCAAGAGAGAGACTTACT...AGAGCTCATGTCCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCCTTCCACTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR TCA 90 bp | AGGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGACATGAGCTCTTCTGAGGCACTAGAGAAGGGTGCTTaGGAATCTGGGATTTACACA | + |
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Preference number: 4 (lower is better) Translates to: RLAQAPAPPSQDMSSSEALEKGA*ESGIYT Trigger: TGTGTAAATCCCAGATTCTCAAGCACCCTTCTCTAG...TGCCTCAGAAGAGCTCATGTCCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR CCA 90 bp | TTCCATAGAGACACCAGACCGTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCAGCTGCTCCAAGACTTTaGCTGTGTTCCCATAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FHRDTRPWESGRLAQAPAAAPRL*LCSHRG Trigger: TCCTCTATGGGAACACAGCCAAAGTCTTGGAGCAGC...TGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCTGGTGTCTCTATGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR TCA 90 bp | TCCATAGAGACACCAGACCGTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACAAGGTTTCAAGAACATaGCTTCTGGTAGCTTCAACC | + |
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Preference number: 4 (lower is better) Translates to: SIETPDRGRVEGSPRLQHKVSRT*LLVAST Trigger: GGTTGAAGCTACCAGAAGTCATGTTCTTGAAACCTT...GTGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCTGGTGTCTCTATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR TCA 90 bp | TTCCATAGAGACACCAGACCGTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCAGTAAAGGAGCTGGTCTaGGTCTGTCCATACCAAATT | + |
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Preference number: 4 (lower is better) Translates to: FHRDTRPWESGRLAQAPAVKELV*VCPYQI Trigger: AATTTGGTATGGACAGACTCAGACCAGCTCCTTTAC...TGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCTGGTGTCTCTATGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR CCA 90 bp | AGACACCAGACCGTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACCACCGTCCTCTATGTGATTAGCTaGATCATCAACAAGACTAAG | + |
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Preference number: 4 (lower is better) Translates to: RHQTVGEWKARPGSSTTVLYVIS*IINKTK Trigger: CTTAGTCTTGTTGATGATCCAGCTAATCACATAGAG...GACGGTGGTGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCTGGTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR CAA 90 bp | AGACCGTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGACACGGGCAGGGGATCCTaGGCACTCAGTATGGTACTA | + |
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Preference number: 5 (lower is better) Translates to: RPWESGRLAQAPAPPSQDTGRGS*ALSMVL Trigger: TAGTACCATACTGAGTGCCAAGGATCCCCTGCCCGT...GTCCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR CAA 90 bp | GTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGACATGAGCGCTCTGCACGACTATaGGCTGCTCCAAGACTTTGG | + |
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Preference number: 5 (lower is better) Translates to: VGEWKARPGSSTTVPGHERSARL*AAPRLW Trigger: CCAAAGTCTTGGAGCAGCCAATAGTCGTGCAGAGCG...CTCATGTCCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR CAA 90 bp | GACACCAGACCGTGGGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACCACCGTCCAGACTAAGCACTTTCTaGGGGAGGCCTTCTATTAAC | + |
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Preference number: 5 (lower is better) Translates to: DTRPWESGRLAQAPAPPSRLSTF*GRPSIN Trigger: GTTAATAGAAGGCCTCCCCAAGAAAGTGCTTAGTCT...GGACGGTGGTGCTGGAGCCTGGGCGAGCCTTCCACTCTCCCACGGTCTGGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS-3UTR CAA 90 bp | GGAGAGTGGAAGGCTCGCCCAGGCTCCAGCACCACCGTCCCAGGACATGAGCTCGCTAGAGAAGGGTGCTaGAGAATCTGGGATTTACAC | + |
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Preference number: 5 (lower is better) Translates to: GEWKARPGSSTTVPGHELAREGC*RIWDLH Trigger: GTGTAAATCCCAGATTCTCAAGCACCCTTCTCTAGC...GAGCTCATGTCCTGGGACGGTGGTGCTGGAGCCTGGGCGAGCCTTCCACTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS CCA 90 bp | GAACTGGAAGACACGGCCATCAGTGCCCACGCTCTGCACGACTATTaGCTGCTCCAAGACTTTGGCTGTGTTCCCATAGAGGAGCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: ELEDTAISAHALHDY*LLQDFGCVPIEEPG Trigger: GCCAGGCTCCTCTATGGGAACACAGCCAAAGTCTTGGAGCAGCCAATAGTCGTGCAGAGCGTGGGCACTGATGGCCGTGTCTTCCAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS TCA 90 bp | TTTGATGACTGGGCGACACCAGAAGTGCCGGTAAAGGAGCTGGTCTaGGTCTGTCCATACCAAATTCTTGACGCCCTCGCTAGAAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: FDDWATPEVPVKELV*VCPYQILDALARSQ Trigger: CTGGCTTCTAGCGAGGGCGTCAAGAATTTGGTATGGACAGACTCAGACCAGCTCCTTTACCGGCACTTCTGGTGTCGCCCAGTCATCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS CCA 72 bp | CCACGCTCTGCACGACTATTGGCTGCTCCAAGACTTTaGCTGTGTTCCCATAGAGGAGCCTGGCCTGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PRSARLLAAPRL*LCSHRGAWPGP Trigger: TGGCCCAGGCCAGGCTCCTCTATGGGAACACAGCCAAAGTCTTGGAGCAGCCAATAGTCGTGCAGAGCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS CAA 90 bp | GGAACTGGAAGACACGGCCATCAGTGCCCACGCTCTGCACGACTATaGGCTGCTCCAAGACTTTGGCTGTGTTCCCATAGAGGAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GTGRHGHQCPRSARL*AAPRLWLCSHRGAW Trigger: CCAGGCTCCTCTATGGGAACACAGCCAAAGTCTTGGAGCAGCCAATAGTCGTGCAGAGCGTGGGCACTGATGGCCGTGTCTTCCAGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS CAA 72 bp | ACCTCCTCCCTGGAGGCAATGACGGGCAGGGGATCCTaGGCACTCAGTATGGTACTACTAGTACCTCGGACC | + |
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Preference number: 6 (lower is better) Translates to: TSSLEAMTGRGS*ALSMVLLVPRT Trigger: GGTCCGAGGTACTAGTAGTACCATACTGAGTGCCAAGGATCCCCTGCCCGTCATTGCCTCCAGGGAGGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS GCA 72 bp | AGGAACTGGAAGACACGGCCATCAGTGCCCACGCTCTaGACGACTATTGGCTGCTCCAAGACTTTGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RNWKTRPSVPTL*TTIGCSKTLAV Trigger: CACAGCCAAAGTCTTGGAGCAGCCAATAGTCGTGCAGAGCGTGGGCACTGATGGCCGTGTCTTCCAGTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS CCA 72 bp | GACACGGCCATCAGTGCCCACGCTCTGCACGACTATTaGCTGCTCCAAGACTTTGGCTGTGTTCCCATAGAG | + |
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Preference number: 6 (lower is better) Translates to: DTAISAHALHDY*LLQDFGCVPIE Trigger: CTCTATGGGAACACAGCCAAAGTCTTGGAGCAGCCAATAGTCGTGCAGAGCGTGGGCACTGATGGCCGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS TCA 72 bp | TGGGCGACACCAGAAGTGCCGGTAAAGGAGCTGGTCTaGGTCTGTCCATACCAAATTCTTGACGCCCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: WATPEVPVKELV*VCPYQILDALA Trigger: AGCGAGGGCGTCAAGAATTTGGTATGGACAGACTCAGACCAGCTCCTTTACCGGCACTTCTGGTGTCGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS CAA 72 bp | AGACACGGCCATCAGTGCCCACGCTCTGCACGACTATaGGCTGCTCCAAGACTTTGGCTGTGTTCCCATAGA | + |
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Preference number: 6 (lower is better) Translates to: RHGHQCPRSARL*AAPRLWLCSHR Trigger: TCTATGGGAACACAGCCAAAGTCTTGGAGCAGCCAATAGTCGTGCAGAGCGTGGGCACTGATGGCCGTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS CAA 72 bp | TTTTGGGCAGAGGTCCGCCTGGCTAGAGAAGGGTGCTaGAGAATCTGGGATTTACACAGCTGTATGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FWAEVRLAREGC*RIWDLHSCMRL Trigger: CAGCCTCATACAGCTGTGTAAATCCCAGATTCTCAAGCACCCTTCTCTAGCCAGGCGGACCTCTGCCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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| CDS CCA 72 bp | TTAGTTGTTCTGGAAGAAAGCGTTGTGGCCGTAAATTaGCCTTTTCCAGGAAATACAAGGTGTGGGGATGGG | + |
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Preference number: 6 (lower is better) Translates to: LVVLEESVVAVN*PFPGNTRCGDG Trigger: CCCATCCCCACACCTTGTATTTCCTGGAAAAGGCCAATTTACGGCCACAACGCTTTCTTCCAGAACAACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030365.6 |
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