RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRPL34 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034880

Ensembl transcript IDs: ENSMUST00000048914.8

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCTTCAAATATATTCACAGAAATGGATGAGGTATCGCAGGTGCTaGTGGTTGGTAAGCAGCCGTCGACGGGGGATGCGTCTAAAAACC +
Preference number: 1 (lower is better)
Translates to: CLQIYSQKWMRYRRC*WLVSSRRRGMRLKT
Trigger: GGTTTTTAGACGCATCCCCCGTCGACGGCTGCTTACCAACCACCAGCACCTGCGATACCTCATCCATTTCTGTGAATATATTTGAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
3UTR GCA 90 bp AGATGCCTTCAAATATATTCACAGAAATGGATGAGGTATCGCAGGTaGTGGTGGTTGGTAAGCAGCCGTCGACGGGGGATGCGTCTAAAA +
Preference number: 1 (lower is better)
Translates to: RCLQIYSQKWMRYRR*WWLVSSRRRGMRLK
Trigger: TTTTAGACGCATCCCCCGTCGACGGCTGCTTACCAACCACCAGCACCTGCGATACCTCATCCATTTCTGTGAATATATTTGAAGGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
3UTR CCA 90 bp CTTCAAATATATTCACAGAAATGGATGAGGTATCGCAGGTGCTGGTaGTTGGTAAGCAGCCGTCGACGGGGGATGCGTCTAAAAACCTAC +
Preference number: 1 (lower is better)
Translates to: LQIYSQKWMRYRRCW*LVSSRRRGMRLKTY
Trigger: GTAGGTTTTTAGACGCATCCCCCGTCGACGGCTGCTTACCAACCACCAGCACCTGCGATACCTCATCCATTTCTGTGAATATATTTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
3UTR CCA 90 bp AATGACCCCGTCTTGCAAAGATGCCTTCAAATATATTCACAGAAATaGATGAGGTATCGCAGGTGCTGGTGGTTGGTAAGCAGCCGTCGA +
Preference number: 1 (lower is better)
Translates to: NDPVLQRCLQIYSQK*MRYRRCWWLVSSRR
Trigger: TCGACGGCTGCTTACCAACCACCAGCACCTGCGATACCTCATCCATTTCTGTGAATATATTTGAAGGCATCTTTGCAAGACGGGGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
3UTR CAA 90 bp CAAATATATTCACAGAAATGGATGAGGTATCGCAGGTGCTGGTGGTaGGTAAGCAGCCGTCGACGGGGGATGCGTCTAAAAACCTACGAA +
Preference number: 2 (lower is better)
Translates to: QIYSQKWMRYRRCWW*VSSRRRGMRLKTYE
Trigger: TTCGTAGGTTTTTAGACGCATCCCCCGTCGACGGCTGCTTACCAACCACCAGCACCTGCGATACCTCATCCATTTCTGTGAATATATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
3UTR-3UTR GCA 90 bp GACCCCGTCTTGCAAAGATGCCTTCAAATATATTCACAGAAATGGATGAGGTATCCCCCACTTTCAGCTTaGCCCAACTTCTCGCCCTCG +
Preference number: 2 (lower is better)
Translates to: DPVLQRCLQIYSQKWMRYPPLSA*PNFSPS
Trigger: CGAGGGCGAGAAGTTGGGGCAAGCTGAAAGTGGGGG...ATACCTCATCCATTTCTGTGAATATATTTGAAGGCATCTTTGCAAGACGGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
3UTR-3UTR CCA 90 bp TGTTTTAATGACCCCGTCTTGCAAAGATGCCTTCAAATATATTCACAGAAATGGAGGTATCGCAGGTGCTaGTGGTTGGTAAGCAGCCGT +
Preference number: 2 (lower is better)
Translates to: CFNDPVLQRCLQIYSQKWRYRRC*WLVSSR
Trigger: ACGGCTGCTTACCAACCACCAGCACCTGCGATACCT...CCATTTCTGTGAATATATTTGAAGGCATCTTTGCAAGACGGGGTCATTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
3UTR-3UTR CCA 90 bp TTTATTAAGTCGGTAATACTTTGGAATGGCTGGAAACGTAGGGGTGGTGTCTGTATATATTCACAGAAATaGATGAGGTATCGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: FIKSVILWNGWKRRGGVCIYSQK*MRYRRC
Trigger: GCACCTGCGATACCTCATCCATTTCTGTGAATATAT...ACAGACACCACCCCTACGTTTCCAGCCATTCCAAAGTATTACCGACTTAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
3UTR GCA 72 bp AAAAACCTACGAAGGGACAGACCCCCACTTTCAGCTTaGCCCAACTTCTCGCCCTCGGGCAACTCTACCGGC +
Preference number: 3 (lower is better)
Translates to: KNLRRDRPPLSA*PNFSPSGNSTG
Trigger: GCCGGTAGAGTTGCCCGAGGGCGAGAAGTTGGGGCAAGCTGAAAGTGGGGGTCTGTCCCTTCGTAGGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
3UTR CCA 72 bp ATATATTCACAGAAATGGATGAGGTATCGCAGGTGCTaGTGGTTGGTAAGCAGCCGTCGACGGGGGATGCGT +
Preference number: 3 (lower is better)
Translates to: IYSQKWMRYRRC*WLVSSRRRGMR
Trigger: ACGCATCCCCCGTCGACGGCTGCTTACCAACCACCAGCACCTGCGATACCTCATCCATTTCTGTGAATATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
3UTR GCA 72 bp CAAATATATTCACAGAAATGGATGAGGTATCGCAGGTaGTGGTGGTTGGTAAGCAGCCGTCGACGGGGGATG +
Preference number: 3 (lower is better)
Translates to: QIYSQKWMRYRR*WWLVSSRRRGM
Trigger: CATCCCCCGTCGACGGCTGCTTACCAACCACCAGCACCTGCGATACCTCATCCATTTCTGTGAATATATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS-3UTR TCA 90 bp ATATTTATTAAGTCGGTAATACTTTGGAATGGCTGGAAACGTAGGGGTGGTGTCGCATGCGACGGAGGATaGCCTGCACGCCGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: IFIKSVILWNGWKRRGGVACDGG*PARRQA
Trigger: CGCCTGCCGGCGTGCAGGTCATCCTCCGTCGCATGC...GACACCACCCCTACGTTTCCAGCCATTCCAAAGTATTACCGACTTAATAAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS-3UTR GCA 90 bp TGTGTTTTAATGACCCCGTCTTGCAAAGATGCCTTCAAATATATTCACAGAAATGCGCGGCCGCGAGCCTaGTGCAGGGAGAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CVLMTPSCKDAFKYIHRNARPRA*CRERRG
Trigger: GCCTCTCCTCTCCCTGCAGCAGGCTCGCGGCCGCGC...ATTTCTGTGAATATATTTGAAGGCATCTTTGCAAGACGGGGTCATTAAAACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS-3UTR GCA 90 bp CCCCGTCTTGCAAAGATGCCTTCAAATATATTCACAGAAATGGATGAGGTATCGCGACGGACCCAGCCGTaGTTGTGCTTGCGCTTGATG +
Preference number: 4 (lower is better)
Translates to: PRLAKMPSNIFTEMDEVSRRTQP*LCLRLM
Trigger: CATCAAGCGCAAGCACAAGCACGGCTGGGTCCGTCG...CGATACCTCATCCATTTCTGTGAATATATTTGAAGGCATCTTTGCAAGACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS-3UTR GCA 90 bp ATGCCTTCAAATATATTCACAGAAATGGATGAGGTATCGCAGGTGCTGGTGGTTAGTGGCTCAGGGACTTaGGGCCCTTCAGCATGCGAC +
Preference number: 4 (lower is better)
Translates to: MPSNIFTEMDEVSQVLVVSGSGT*GPSACD
Trigger: GTCGCATGCTGAAGGGCCGCAAGTCCCTGAGCCACT...AACCACCAGCACCTGCGATACCTCATCCATTTCTGTGAATATATTTGAAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS-3UTR TCA 90 bp CCCCGTCTTGCAAAGATGCCTTCAAATATATTCACAGAAATGGATGAGGTATCGTTGATGTTGCTCGGCTaGTACTCGTTTCCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: PRLAKMPSNIFTEMDEVSLMLLG*YSFPRA
Trigger: CGCGCGCGGAAACGAGTATCAGCCGAGCAACATCAA...CGATACCTCATCCATTTCTGTGAATATATTTGAAGGCATCTTTGCAAGACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS-3UTR TCA 90 bp AAGTCGGTAATACTTTGGAATGGCTGGAAACGTAGGGGTGGTGTCTGTGTTTTAGCTTGTGCTTGCGCTTaGTGTTGCTCGGCTGATACT +
Preference number: 4 (lower is better)
Translates to: KSVILWNGWKRRGGVCVLACACA*CCSADT
Trigger: AGTATCAGCCGAGCAACATCAAGCGCAAGCACAAGC...TAAAACACAGACACCACCCCTACGTTTCCAGCCATTCCAAAGTATTACCGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS-3UTR GCA 90 bp TGTGTTTTAATGACCCCGTCTTGCAAAGATGCCTTCAAATATATTCACAGAAATACCCAGCCGTGCTTGTaGTTGCGCTTGATGTTGCTC +
Preference number: 4 (lower is better)
Translates to: CVLMTPSCKDAFKYIHRNTQPCL*LRLMLL
Trigger: GAGCAACATCAAGCGCAAGCACAAGCACGGCTGGGT...ATTTCTGTGAATATATTTGAAGGCATCTTTGCAAGACGGGGTCATTAAAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS GCA 90 bp TGGCTCAGGGACTTGCGGCCCTTCAGCATGCGACGGAGGATGACCTaGACGCCGGCAGGCGTGCTCAGCCGACGGACCCAGCCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: WLRDLRPFSMRRRMT*TPAGVLSRRTQPCL
Trigger: CAAGCACGGCTGGGTCCGTCGGCTGAGCACGCCTGCCGGCGTGCAGGTCATCCTCCGTCGCATGCTGAAGGGCCGCAAGTCCCTGAGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS TCA 90 bp CGACGGACCCAGCCGTGCTTGTGCTTGCGCTTGATGTTGCTCGGCTaGTACTCGTTTCCGCGCGCGCGGCCGCGAGCCTGCTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: RRTQPCLCLRLMLLG*YSFPRARPRACCRE
Trigger: CTCCCTGCAGCAGGCTCGCGGCCGCGCGCGCGGAAACGAGTATCAGCCGAGCAACATCAAGCGCAAGCACAAGCACGGCTGGGTCCGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS TCA 90 bp CAGGCGTGCTCAGCCGACGGACCCAGCCGTGCTTGTGCTTGCGCTTaGTGTTGCTCGGCTGATACTCGTTTCCGCGCGCGCGGCCGCGAG +
Preference number: 5 (lower is better)
Translates to: QACSADGPSRACACA*CCSADTRFRARGRE
Trigger: CTCGCGGCCGCGCGCGCGGAAACGAGTATCAGCCGAGCAACATCAAGCGCAAGCACAAGCACGGCTGGGTCCGTCGGCTGAGCACGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS-3UTR CAA 90 bp CCCCGTCTTGCAAAGATGCCTTCAAATATATTCACAGAAATGGATGAGGTATCGCAGCCGTGCTTGTGCTaGCGCTTGATGTTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: PRLAKMPSNIFTEMDEVSQPCLC*RLMLLG
Trigger: GCCGAGCAACATCAAGCGCAAGCACAAGCACGGCTG...CGATACCTCATCCATTTCTGTGAATATATTTGAAGGCATCTTTGCAAGACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS-3UTR CAA 90 bp CCCCGTCTTGCAAAGATGCCTTCAAATATATTCACAGAAATGGATGAGGTATCGCGGACCCAGCCGTGCTaGTGCTTGCGCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: PRLAKMPSNIFTEMDEVSRTQPC*CLRLML
Trigger: CAACATCAAGCGCAAGCACAAGCACGGCTGGGTCCG...CGATACCTCATCCATTTCTGTGAATATATTTGAAGGCATCTTTGCAAGACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS GCA 72 bp GACTTGCGGCCCTTCAGCATGCGACGGAGGATGACCTaGACGCCGGCAGGCGTGCTCAGCCGACGGACCCAG +
Preference number: 6 (lower is better)
Translates to: DLRPFSMRRRMT*TPAGVLSRRTQ
Trigger: CTGGGTCCGTCGGCTGAGCACGCCTGCCGGCGTGCAGGTCATCCTCCGTCGCATGCTGAAGGGCCGCAAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS TCA 72 bp TCAGGGACTTGCGGCCCTTCAGCATGCGACGGAGGATaGCCTGCACGCCGGCAGGCGTGCTCAGCCGACGGA +
Preference number: 6 (lower is better)
Translates to: SGTCGPSACDGG*PARRQACSADG
Trigger: TCCGTCGGCTGAGCACGCCTGCCGGCGTGCAGGTCATCCTCCGTCGCATGCTGAAGGGCCGCAAGTCCCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS TCA 72 bp CAGCCGTGCTTGTGCTTGCGCTTGATGTTGCTCGGCTaGTACTCGTTTCCGCGCGCGCGGCCGCGAGCCTGC +
Preference number: 6 (lower is better)
Translates to: QPCLCLRLMLLG*YSFPRARPRAC
Trigger: GCAGGCTCGCGGCCGCGCGCGCGGAAACGAGTATCAGCCGAGCAACATCAAGCGCAAGCACAAGCACGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS TCA 72 bp TCAGCCGACGGACCCAGCCGTGCTTGTGCTTGCGCTTaGTGTTGCTCGGCTGATACTCGTTTCCGCGCGCGC +
Preference number: 6 (lower is better)
Translates to: SADGPSRACACA*CCSADTRFRAR
Trigger: GCGCGCGCGGAAACGAGTATCAGCCGAGCAACATCAAGCGCAAGCACAAGCACGGCTGGGTCCGTCGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8
CDS CCA 72 bp GGCCAGGAGTCCGGGAGCCCCATCCAGACTCTGGACTaGAGATACCTGCCACTCAATAGGGCCACCGATCTG +
Preference number: 6 (lower is better)
Translates to: GQESGSPIQTLD*RYLPLNRATDL
Trigger: CAGATCGGTGGCCCTATTGAGTGGCAGGTATCTCCAGTCCAGAGTCTGGATGGGGCTCCCGGACTCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048914.8