Pregenerated sensors for MRPL33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000106918Ensembl transcript IDs: ENSMUST00000031024.14, ENSMUST00000201910.4
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCTTGTCAGACTCAAGGCATGGCTGAGCTAGCTGCATGTCCATaGCTGCTTTTGTCTGTGGACAGCCTTGGTCTTCGGCTTGTTGTT | + |
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Preference number: 1 (lower is better) Translates to: PACQTQGMAELAACP*LLLSVDSLGLRLVV Trigger: AACAACAAGCCGAAGACCAAGGCTGTCCACAGACAAAAGCAGCCATGGACATGCAGCTAGCTCAGCCATGCCTTGAGTCTGACAAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR GCA 90 bp | CACAAATCTATAATCCCAACACTCAAGAGACTCACACAGGAGGATTaGAAGGAGCTCAAGGCCAGGCTAGGCTACGGACTGAGACTGTCT | + |
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Preference number: 1 (lower is better) Translates to: HKSIIPTLKRLTQED*KELKARLGYGLRLS Trigger: AGACAGTCTCAGTCCGTAGCCTAGCCTGGCCTTGAGCTCCTTGCAATCCTCCTGTGTGAGTCTCTTGAGTGTTGGGATTATAGATTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR TCA 90 bp | ATTAAGGCCTATAAAGCATCCAGGGAGATAAATATGTGGTCTCTGTaGAGGACTCTTTCGGCTCTGTCCCTTAGCCAACATCCCCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: IKAYKASREINMWSL*RTLSALSLSQHPPR Trigger: CCTCGGGGGATGTTGGCTAAGGGACAGAGCCGAAAGAGTCCTTCACAGAGACCACATATTTATCTCCCTGGATGCTTTATAGGCCTTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031024.14 |
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| 3UTR TCA 90 bp | TGGTTGTTTATTTGTCTCATAGATTCCAGGATGGCTTTGAATTTCTaGTCCTCTTGCCTACATCTTTCAGGGACAGGGGTCACAGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: WLFICLIDSRMALNF*SSCLHLSGTGVTGV Trigger: CACACCTGTGACCCCTGTCCCTGAAAGATGTAGGCAAGAGGATCAGAAATTCAAAGCCATCCTGGAATCTATGAGACAAATAAACAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CAA 90 bp | GCACAAATCTATAATCCCAACACTCAAGAGACTCACACAGGAGGATaGCAAGGAGCTCAAGGCCAGGCTAGGCTACGGACTGAGACTGTC | + |
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Preference number: 2 (lower is better) Translates to: AQIYNPNTQETHTGG*QGAQGQARLRTETV Trigger: GACAGTCTCAGTCCGTAGCCTAGCCTGGCCTTGAGCTCCTTGCAATCCTCCTGTGTGAGTCTCTTGAGTGTTGGGATTATAGATTTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCCAACTTAAGCCTCACTCATCTCAAGCCCCTTACAGTGCACTTCTGCATCTGCATGTCCATGGCTaGTTTTGTCTGTGGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: VCQLKPHSSQAPYSALLHLHVHG*FCLWTA Trigger: GGCTGTCCACAGACAAAAGCAGCCATGGACATGCAG...ATGCAGAAGTGCACTGTAAGGGGCTTGAGATGAGTGAGGCTTAAGTTGGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CAA 90 bp | TACGTTATGCTACAGTTGACTCCAGCTGGGAATGAGCTCACTGTGTaGTGTCCTGTCATCCTCTCTGTGGCTCCACATCTCTGGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: YVMLQLTPAGNELTV*CPVILSVAPHLWFC Trigger: GCAAAACCAGAGATGTGGAGCCACAGAGAGGATGACAGGACACAACACAGTGAGCTCATTCCCAGCTGGAGTCAACTGTAGCATAACGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR TCA 90 bp | TGCCAACTTAAGCCTCACTCATCTCAAGCCCCTTACAGTGCACTTCTGCATGAGACGTTATGCTACAGTTaGCTCCAGCTGGGAATGAGC | + |
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Preference number: 2 (lower is better) Translates to: CQLKPHSSQAPYSALLHETLCYS*LQLGMS Trigger: GCTCATTCCCAGCTGGAGTCAACTGTAGCATAACGT...CTCATGCAGAAGTGCACTGTAAGGGGCTTGAGATGAGTGAGGCTTAAGTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR GCA 90 bp | GTGAAAACAGAATCAGATGGCATGGGGTTTCATTGTGCTACCCAGAGAGACATGCTCACACAGGAGGATTaGAAGGAGCTCAAGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VKTESDGMGFHCATQRDMLTQED*KELKAR Trigger: CCTGGCCTTGAGCTCCTTGCAATCCTCCTGTGTGAG...CATGTCTCTCTGGGTAGCACAATGAAACCCCATGCCATCTGATTCTGTTTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CCA 90 bp | GAATCAGATGGCATGGGGTTTCATTGTGCTACCCAGAGAGACATGCAATGTGAAGGCTGCTTTTGTCTGTaGACAGCCTTGGTCTTCGGC | + |
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Preference number: 2 (lower is better) Translates to: ESDGMGFHCATQRDMQCEGCFCL*TALVFG Trigger: GCCGAAGACCAAGGCTGTCCACAGACAAAAGCAGCC...TTCACATTGCATGTCTCTCTGGGTAGCACAATGAAACCCCATGCCATCTGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGATCATCAGGAGGGCCACATAGGCCCTCAGTGTGTACATGATATGCTGGATCTAGCTGCATGTCCATaGCTGCTTTTGTCTGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SDHQEGHIGPQCVHDMLDLAACP*LLLSVD Trigger: GTCCACAGACAAAAGCAGCCATGGACATGCAGCTAG...ATCCAGCATATCATGTACACACTGAGGGCCTATGTGGCCCTCCTGATGATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCAACTTAAGCCTCACTCATCTCAAGCCCCTTACAGTGCACTTCTGCATGAGGGACTTGCTGGATCCTaGATCTTTAGTGGGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: CQLKPHSSQAPYSALLHEGLAGS*IFSGME Trigger: TTCCATCCCACTAAAGATCCAGGATCCAGCAAGTCC...CTCATGCAGAAGTGCACTGTAAGGGGCTTGAGATGAGTGAGGCTTAAGTTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGCCCCTTACAGTGCACTTCTGCATGAGCATCTTAAACTCAACCTCAGCGCTGTCATCCTCTCTGTaGCTCCACATCTCTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LKPLTVHFCMSILNSTSALSSSL*LHISGF Trigger: AAAACCAGAGATGTGGAGCCACAGAGAGGATGACAG...CGCTGAGGTTGAGTTTAAGATGCTCATGCAGAAGTGCACTGTAAGGGGCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR GCA 90 bp | TCTGATCATCAGGAGGGCCACATAGGCCCTCAGTGTGTACATGATATGCTGGATTCTTGTTCAGCCTTCTaGATGTTCTTTGGGGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: SDHQEGHIGPQCVHDMLDSCSAF*MFFGGL Trigger: CAAACCCCCAAAGAACATGCAGAAGGCTGAACAAGA...ATCCAGCATATCATGTACACACTGAGGGCCTATGTGGCCCTCCTGATGATCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR GCA 90 bp | GTGAAAACAGAATCAGATGGCATGGGGTTTCATTGTGCTACCCAGAGAGACATGAGGTGTGCCTCATCATaGCCAGTTTATGCAGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: VKTESDGMGFHCATQRDMRCASS*PVYAVL Trigger: TAGCACTGCATAAACTGGGCATGATGAGGCACACCT...CATGTCTCTCTGGGTAGCACAATGAAACCCCATGCCATCTGATTCTGTTTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CAA 90 bp | TATTTGTCTCATAGATTCCAGGATGGCTTTGAATTTCTGATCCTCTaGCCTACATCTTTCAGGGACAGGGGTCACAGGTGTGCCTCATCA | + |
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Preference number: 2 (lower is better) Translates to: YLSHRFQDGFEFLIL*PTSFRDRGHRCASS Trigger: TGATGAGGCACACCTGTGACCCCTGTCCCTGAAAGATGTAGGCAAGAGGATCAGAAATTCAAAGCCATCCTGGAATCTATGAGACAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGCCCCTTACAGTGCACTTCTGCATGAGCATCTTAAACTCAACCTCAGCGGAACTTCTCAAAGAATaGCTTCATCCTGCATCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LKPLTVHFCMSILNSTSAELLKE*LHPASS Trigger: TGAAGATGCAGGATGAAGCCATTCTTTGAGAAGTTC...CGCTGAGGTTGAGTTTAAGATGCTCATGCAGAAGTGCACTGTAAGGGGCTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CCA 90 bp | AGATTGTGCAGAACATGGCAGCACAAATCTATAATCCCAACACTCAAGAGACTCGTGGCTCCACATCTCTaGTTTTGCCTAATCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RLCRTWQHKSIIPTLKRLVAPHL*FCLIPG Trigger: TCCTGGGATTAGGCAAAACCAGAGATGTGGAGCCAC...GAGTCTCTTGAGTGTTGGGATTATAGATTTGTGCTGCCATGTTCTGCACAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR GCA 90 bp | TTGGTTGTTTATTTGTCTCATAGATTCCAGGATGGCTTTGAATTTCTGATCCTCAGCTCAGTGGTAGAGTaGTTGCCTAGCAAGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: LVVYLSHRFQDGFEFLILSSVVE*LPSKHK Trigger: CTTGTGCTTGCTAGGCAAGCACTCTACCACTGAGCT...GAGGATCAGAAATTCAAAGCCATCCTGGAATCTATGAGACAAATAAACAACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CAA 90 bp | TCTTCATCCTGGGAAAGCTTCTGTAAGATGAGTATAGAAAAGGACTaGCTGGATCCTGGATCTTTAGTGGGATGGAACTTCTCAAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: SSSWESFCKMSIEKD*LDPGSLVGWNFSKN Trigger: ATTCTTTGAGAAGTTCCATCCCACTAAAGATCCAGGATCCAGCAAGTCCTTTTCTATACTCATCTTACAGAAGCTTTCCCAGGATGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CAA 90 bp | ATGGTCTTGTTCAGCCTTCTGCATGTTCTTTGGGGGTTTGTTTTCTaGGTTGTTTATTTGTCTCATAGATTCCAGGATGGCTTTGAATTT | + |
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Preference number: 2 (lower is better) Translates to: MVLFSLLHVLWGFVF*VVYLSHRFQDGFEF Trigger: AAATTCAAAGCCATCCTGGAATCTATGAGACAAATAAACAACCAAGAAAACAAACCCCCAAAGAACATGCAGAAGGCTGAACAAGACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTGTTTATTTGTCTCATAGATTCCAGGATGGCTTTGAATTTCTGATCCTCGGATCTTTAGTGGGATaGAACTTCTCAAAGAATGGC | + |
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Preference number: 2 (lower is better) Translates to: LVVYLSHRFQDGFEFLILGSLVG*NFSKNG Trigger: GCCATTCTTTGAGAAGTTCCATCCCACTAAAGATCC...GAGGATCAGAAATTCAAAGCCATCCTGGAATCTATGAGACAAATAAACAACCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTTTTTCCTTTCCTGTGAACCAAAATGTCTGTTATGGTAAGCCGTACCTGAGATTGTGCAGAACATaGCAGCACAAATCTATAATC | + |
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Preference number: 2 (lower is better) Translates to: FSFSFPVNQNVCYGKPYLRLCRT*QHKSII Trigger: GATTATAGATTTGTGCTGCCATGTTCTGCACAATCT...CAGGTACGGCTTACCATAACAGACATTTTGGTTCACAGGAAAGGAAAAACTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR GCA 72 bp | CAGGGGTCACAGGTGTGCCTCATCATGCCCAGTTTATaGAGTGCTAAGGACCAAGCCTGGGTCCGTGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: QGSQVCLIMPSL*SAKDQAWVRVP Trigger: TGGCACACGGACCCAGGCTTGGTCCTTAGCACTGCATAAACTGGGCATGATGAGGCACACCTGTGACCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR TCA 72 bp | CACCCTGCTAGGGCTGCAGTATCTAAACAGCCCATCTaGTCATCAGGAGGGCCACATAGGCCCTCAGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: HPARAAVSKQPI*SSGGPHRPSVC Trigger: ACACACTGAGGGCCTATGTGGCCCTCCTGATGATCAGATGGGCTGTTTAGATACTGCAGCCCTAGCAGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR GCA 72 bp | AGGCCATGCTGGAACTTCCTCGTCTTCATTGCACACTaGAGAGTTCGAAACGGTGCCTCACCCTCGAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: RPCWNFLVFIAH*RVRNGASPSSF Trigger: GAAGCTCGAGGGTGAGGCACCGTTTCGAACTCTGCAGTGTGCAATGAAGACGAGGAAGTTCCAGCATGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031024.14 |
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| 3UTR GCA 72 bp | TCTTTCAGGGACAGGGGTCACAGGTGTGCCTCATCATaGCCAGTTTATGCAGTGCTAAGGACCAAGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SFRDRGHRCASS*PVYAVLRTKPG Trigger: CCCAGGCTTGGTCCTTAGCACTGCATAAACTGGGCATGATGAGGCACACCTGTGACCCCTGTCCCTGAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR GCA 72 bp | ATAATCCCAACACTCAAGAGACTCACACAGGAGGATTaGAAGGAGCTCAAGGCCAGGCTAGGCTACGGACTG | + |
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Preference number: 3 (lower is better) Translates to: IIPTLKRLTQED*KELKARLGYGL Trigger: CAGTCCGTAGCCTAGCCTGGCCTTGAGCTCCTTGCAATCCTCCTGTGTGAGTCTCTTGAGTGTTGGGATTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR GCA 72 bp | GTTTATGCAGTGCTAAGGACCAAGCCTGGGTCCGTGTaGCAACTTAAGCCTCACTCATCTCAAGCCCCTTAC | + |
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Preference number: 3 (lower is better) Translates to: VYAVLRTKPGSV*QLKPHSSQAPY Trigger: GTAAGGGGCTTGAGATGAGTGAGGCTTAAGTTGGCACACGGACCCAGGCTTGGTCCTTAGCACTGCATAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CCA 72 bp | TGCATGTCCATGGCTGCTTTTGTCTGTGGACAGCCTTaGTCTTCGGCTTGTTGTTCAGCCACCAAAGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: CMSMAAFVCGQP*SSACCSATKAH Trigger: ATGGGCTTTGGTGGCTGAACAACAAGCCGAAGACCAAGGCTGTCCACAGACAAAAGCAGCCATGGACATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CAA 90 bp | ATCCCAGGTGAAAACAGAATCAGATGGCATGGGGTTTCATTGTGCTACCCAGAGACTCACACAGGAGGATaGCAAGGAGCTCAAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: IPGENRIRWHGVSLCYPETHTGG*QGAQGQ Trigger: CTGGCCTTGAGCTCCTTGCAATCCTCCTGTGTGAGT...CTCTGGGTAGCACAATGAAACCCCATGCCATCTGATTCTGTTTTCACCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CAA 90 bp | CAACTTAAGCCTCACTCATCTCAAGCCCCTTACAGTGCACTTCTGCATGAGCATTGTCCATGGCTGCTTTaGTCTGTGGACAGCCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: QLKPHSSQAPYSALLHEHCPWLL*SVDSLG Trigger: ACCAAGGCTGTCCACAGACAAAAGCAGCCATGGACA...ATGCTCATGCAGAAGTGCACTGTAAGGGGCTTGAGATGAGTGAGGCTTAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CAA 90 bp | CTCAAGCCCCTTACAGTGCACTTCTGCATGAGCATCTTAAACTCAACCTCAGCGAATGAGCTCACTGTGTaGTGTCCTGTCATCCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LKPLTVHFCMSILNSTSANELTV*CPVILS Trigger: AGAGAGGATGACAGGACACAACACAGTGAGCTCATT...CGCTGAGGTTGAGTTTAAGATGCTCATGCAGAAGTGCACTGTAAGGGGCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CAA 90 bp | GTGTGCCAACTTAAGCCTCACTCATCTCAAGCCCCTTACAGTGCACTTCTGCATCTTAGGAATACAGGCTaGAAGATCACACTAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: VCQLKPHSSQAPYSALLHLRNTG*KITLDV Trigger: CACATCTAGTGTGATCTTCAAGCCTGTATTCCTAAG...ATGCAGAAGTGCACTGTAAGGGGCTTGAGATGAGTGAGGCTTAAGTTGGCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR TCA 72 bp | ATAGTACGTTATGCTACAGTTGACTCCAGCTGGGAATaGGCTCACTGTGTTGTGTCCTGTCATCCTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: IVRYATVDSSWE*AHCVVSCHPLC Trigger: ACAGAGAGGATGACAGGACACAACACAGTGAGCTCATTCCCAGCTGGAGTCAACTGTAGCATAACGTACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CCA 72 bp | GACGAGACTCATATCCCAGGTGAAAACAGAATCAGATaGCATGGGGTTTCATTGTGCTACCCAGAGAGACAT | + |
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Preference number: 3 (lower is better) Translates to: DETHIPGENRIR*HGVSLCYPERH Trigger: ATGTCTCTCTGGGTAGCACAATGAAACCCCATGCCATCTGATTCTGTTTTCACCTGGGATATGAGTCTCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR TCA 72 bp | GAATGGCTTCATCCTGCATCTTCATTACTGGTAGCTTaGTACAGACCTGTGCCCAAGTGCTTAGGAATACAG | + |
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Preference number: 3 (lower is better) Translates to: EWLHPASSLLVA*YRPVPKCLGIQ Trigger: CTGTATTCCTAAGCACTTGGGCACAGGTCTGTATCAAGCTACCAGTAATGAAGATGCAGGATGAAGCCATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR TCA 72 bp | GTGGCTCCACATCTCTGGTTTTGCCTAATCCCAGGATaGCATCAGTTTTCCATCGAGGGTGTTAAACATTTG | + |
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Preference number: 3 (lower is better) Translates to: VAPHLWFCLIPG*HQFSIEGVKHL Trigger: CAAATGTTTAACACCCTCGATGGAAAACTGATGTCATCCTGGGATTAGGCAAAACCAGAGATGTGGAGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR TCA 72 bp | TATAAAGCATCCAGGGAGATAAATATGTGGTCTCTGTaGAGGACTCTTTCGGCTCTGTCCCTTAGCCAACAT | + |
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Preference number: 3 (lower is better) Translates to: YKASREINMWSL*RTLSALSLSQH Trigger: ATGTTGGCTAAGGGACAGAGCCGAAAGAGTCCTTCACAGAGACCACATATTTATCTCCCTGGATGCTTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031024.14 |
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| 3UTR TCA 72 bp | ATTTGTCTCATAGATTCCAGGATGGCTTTGAATTTCTaGTCCTCTTGCCTACATCTTTCAGGGACAGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: ICLIDSRMALNF*SSCLHLSGTGV Trigger: GACCCCTGTCCCTGAAAGATGTAGGCAAGAGGATCAGAAATTCAAAGCCATCCTGGAATCTATGAGACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CCA 72 bp | GAAAAGGACTTGCTGGATCCTGGATCTTTAGTGGGATaGAACTTCTCAAAGAATGGCTTCATCCTGCATCTT | + |
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Preference number: 3 (lower is better) Translates to: EKDLLDPGSLVG*NFSKNGFILHL Trigger: AAGATGCAGGATGAAGCCATTCTTTGAGAAGTTCCATCCCACTAAAGATCCAGGATCCAGCAAGTCCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CAA 90 bp | ATCCCAGGTGAAAACAGAATCAGATGGCATGGGGTTTCATTGTGCTACCCAGAGGAGGGTGTTAAACATTaGTACTTCTCTTTAACTACC | + |
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Preference number: 3 (lower is better) Translates to: IPGENRIRWHGVSLCYPEEGVKH*YFSLTT Trigger: GGTAGTTAAAGAGAAGTACAAATGTTTAACACCCTC...CTCTGGGTAGCACAATGAAACCCCATGCCATCTGATTCTGTTTTCACCTGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CAA 90 bp | CAAAGGCAGGTCATTTCTGACCTTAAACCTCATGTTCTAGAAATGACTTCAGTTTCCACATCTCTGGTTTaGCCTAATCCCAGGATGACA | + |
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Preference number: 3 (lower is better) Translates to: QRQVISDLKPHVLEMTSVSTSLV*PNPRMT Trigger: TGTCATCCTGGGATTAGGCAAAACCAGAGATGTGGA...AACTGAAGTCATTTCTAGAACATGAGGTTTAAGGTCAGAAATGACCTGCCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTGTTTATTTGTCTCATAGATTCCAGGATGGCTTTGAATTTCTGATCCTCTACGTTATGCTACAGTaGACTCCAGCTGGGAATGAG | + |
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Preference number: 3 (lower is better) Translates to: LVVYLSHRFQDGFEFLILYVMLQ*TPAGNE Trigger: CTCATTCCCAGCTGGAGTCAACTGTAGCATAACGTA...GAGGATCAGAAATTCAAAGCCATCCTGGAATCTATGAGACAAATAAACAACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CAA 72 bp | CTGCATGTCCATGGCTGCTTTTGTCTGTGGACAGCCTaGGTCTTCGGCTTGTTGTTCAGCCACCAAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LHVHGCFCLWTA*VFGLLFSHQSP Trigger: TGGGCTTTGGTGGCTGAACAACAAGCCGAAGACCAAGGCTGTCCACAGACAAAAGCAGCCATGGACATGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS-3UTR TCA 90 bp | CCATGCTGGAACTTCCTCGTCTTCATTGCACACTGCAGAGTTCGAAACGGTGCCGGCTTCTCTTGTGGTTaGAGGAGAAACCTGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PCWNFLVFIAHCRVRNGAGFSCG*RRNLSQ Trigger: CTGGGACAGGTTTCTCCTTCAACCACAAGAGAAGCC...GGCACCGTTTCGAACTCTGCAGTGTGCAATGAAGACGAGGAAGTTCCAGCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031024.14 |
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| 3UTR CAA 72 bp | CTACAGTTGACTCCAGCTGGGAATGAGCTCACTGTGTaGTGTCCTGTCATCCTCTCTGTGGCTCCACATCTC | + |
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Preference number: 4 (lower is better) Translates to: LQLTPAGNELTV*CPVILSVAPHL Trigger: GAGATGTGGAGCCACAGAGAGGATGACAGGACACAACACAGTGAGCTCATTCCCAGCTGGAGTCAACTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS-3UTR CCA 90 bp | CCATGCTGGAACTTCCTCGTCTTCATTGCACACTGCAGAGTTCGAAACGGTGCCAGTCGGCTTCTCTTGTaGTTGAAGGAGAAACCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PCWNFLVFIAHCRVRNGASRLLL*LKEKPV Trigger: GACAGGTTTCTCCTTCAACCACAAGAGAAGCCGACT...GGCACCGTTTCGAACTCTGCAGTGTGCAATGAAGACGAGGAAGTTCCAGCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031024.14 |
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| CDS-3UTR TCA 90 bp | CATGCTGGAACTTCCTCGTCTTCATTGCACACTGCAGAGTTCGAAACGGTGCCTCACCAGGATAGTTTTTaGCTTGCTCTTGGCAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: HAGTSSSSLHTAEFETVPHQDSF*LALGKR Trigger: TCTTTTGCCAAGAGCAAGTCAAAAACTATCCTGGTG...AGGCACCGTTTCGAACTCTGCAGTGTGCAATGAAGACGAGGAAGTTCCAGCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031024.14 |
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| CDS-3UTR TCA 90 bp | AGATTGTGCAGAACATGGCAGCACAAATCTATAATCCCAACACTCAAGAGACTCGGCTTCTCTTGTGGTTaGAGGAGAAACCTGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RLCRTWQHKSIIPTLKRLGFSCG*RRNLSQ Trigger: CTGGGACAGGTTTCTCCTTCAACCACAAGAGAAGCC...GAGTCTCTTGAGTGTTGGGATTATAGATTTGTGCTGCCATGTTCTGCACAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS-3UTR CCA 90 bp | TGTGCCCAAGTGCTTAGGAATACAGGCTTGAAGATCACACTAGATGTGCAACTGAGTCGGCTTCTCTTGTaGTTGAAGGAGAAACCTGTC | + |
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Preference number: 4 (lower is better) Translates to: CAQVLRNTGLKITLDVQLSRLLL*LKEKPV Trigger: GACAGGTTTCTCCTTCAACCACAAGAGAAGCCGACT...CAGTTGCACATCTAGTGTGATCTTCAAGCCTGTATTCCTAAGCACTTGGGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CAA 72 bp | CATAGATTCCAGGATGGCTTTGAATTTCTGATCCTCTaGCCTACATCTTTCAGGGACAGGGGTCACAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: HRFQDGFEFLIL*PTSFRDRGHRC Trigger: ACACCTGTGACCCCTGTCCCTGAAAGATGTAGGCAAGAGGATCAGAAATTCAAAGCCATCCTGGAATCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CAA 72 bp | AGAATGGCTTCATCCTGCATCTTCATTACTGGTAGCTaGATACAGACCTGTGCCCAAGTGCTTAGGAATACA | + |
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Preference number: 4 (lower is better) Translates to: RMASSCIFITGS*IQTCAQVLRNT Trigger: TGTATTCCTAAGCACTTGGGCACAGGTCTGTATCAAGCTACCAGTAATGAAGATGCAGGATGAAGCCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS-3UTR GCA 90 bp | CAAAGGCAGGTCATTTCTGACCTTAAACCTCATGTTCTAGAAATGACTTCAGTTGTCCTTGCTCTGTGGTaGCTGAGGCAAGAGTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: QRQVISDLKPHVLEMTSVVLALW*LRQELK Trigger: TTTCAACTCTTGCCTCAGGCACCACAGAGCAAGGAC...AACTGAAGTCATTTCTAGAACATGAGGTTTAAGGTCAGAAATGACCTGCCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CAA 72 bp | ATACAGACCTGTGCCCAAGTGCTTAGGAATACAGGCTaGAAGATCACACTAGATGTGCAACTGCATTCAATT | + |
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Preference number: 4 (lower is better) Translates to: IQTCAQVLRNTG*KITLDVQLHSI Trigger: AATTGAATGCAGTTGCACATCTAGTGTGATCTTCAAGCCTGTATTCCTAAGCACTTGGGCACAGGTCTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CAA 72 bp | TGGGAAAGCTTCTGTAAGATGAGTATAGAAAAGGACTaGCTGGATCCTGGATCTTTAGTGGGATGGAACTTC | + |
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Preference number: 4 (lower is better) Translates to: WESFCKMSIEKD*LDPGSLVGWNF Trigger: GAAGTTCCATCCCACTAAAGATCCAGGATCCAGCAAGTCCTTTTCTATACTCATCTTACAGAAGCTTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS-3UTR TCA 90 bp | AGATTGTGCAGAACATGGCAGCACAAATCTATAATCCCAACACTCAAGAGACTCCACCAGGATAGTTTTTaGCTTGCTCTTGGCAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: RLCRTWQHKSIIPTLKRLHQDSF*LALGKR Trigger: TCTTTTGCCAAGAGCAAGTCAAAAACTATCCTGGTG...GAGTCTCTTGAGTGTTGGGATTATAGATTTGTGCTGCCATGTTCTGCACAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| 3UTR CAA 72 bp | TTCAGCCTTCTGCATGTTCTTTGGGGGTTTGTTTTCTaGGTTGTTTATTTGTCTCATAGATTCCAGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: FSLLHVLWGFVF*VVYLSHRFQDG Trigger: GCCATCCTGGAATCTATGAGACAAATAAACAACCAAGAAAACAAACCCCCAAAGAACATGCAGAAGGCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS-3UTR TCA 90 bp | CAAAGGCAGGTCATTTCTGACCTTAAACCTCATGTTCTAGAAATGACTTCAGTTGAAAATTTCCAAGGCTaGGAGATTCTTCACTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: QRQVISDLKPHVLEMTSVENFQG*EILHSG Trigger: ACCCGAGTGAAGAATCTCTCAGCCTTGGAAATTTTC...AACTGAAGTCATTTCTAGAACATGAGGTTTAAGGTCAGAAATGACCTGCCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS-3UTR CAA 90 bp | GTGTGCCAACTTAAGCCTCACTCATCTCAAGCCCCTTACAGTGCACTTCTGCATAGGGCCTGGCATGGCTaGTCCTTGCTCTGTGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: VCQLKPHSSQAPYSALLHRAWHG*SLLCGA Trigger: GGCACCACAGAGCAAGGACAAGCCATGCCAGGCCCT...ATGCAGAAGTGCACTGTAAGGGGCTTGAGATGAGTGAGGCTTAAGTTGGCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS TCA 90 bp | AGTGCAGAAGGCTCAGCTTCTCTCGGAGTCGGCTTCTCTTGTGGTTaGAGGAGAAACCTGTCCCAGCTTGGCTCACTAGTTTCACCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SAEGSASLGVGFSCG*RRNLSQLGSLVSPG Trigger: TCCTGGTGAAACTAGTGAGCCAAGCTGGGACAGGTTTCTCCTTCAACCACAAGAGAAGCCGACTCCGAGAGAAGCTGAGCCTTCTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031024.14 ENSMUST00000201910.4 |
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| CDS-3UTR CAA 90 bp | GGAACTTCCTCGTCTTCATTGCACACTGCAGAGTTCGAAACGGTGCCTCACCCTCGGAGTCGGCTTCTCTaGTGGTTGAAGGAGAAACCT | + |
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Preference number: 5 (lower is better) Translates to: GTSSSSLHTAEFETVPHPRSRLL*WLKEKP Trigger: AGGTTTCTCCTTCAACCACAAGAGAAGCCGACTCCG...AGGGTGAGGCACCGTTTCGAACTCTGCAGTGTGCAATGAAGACGAGGAAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031024.14 |
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| CDS-3UTR CAA 90 bp | CACTGCAGAGTTCGAAACGGTGCCTCACCCTCGAGCTTCTCATTTAGGAATCAACGGCTTCTCTTGTGGTaGAAGGAGAAACCTGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: HCRVRNGASPSSFSFRNQRLLLW*KEKPVP Trigger: TGGGACAGGTTTCTCCTTCAACCACAAGAGAAGCCG...TTGATTCCTAAATGAGAAGCTCGAGGGTGAGGCACCGTTTCGAACTCTGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031024.14 |
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| CDS CCA 90 bp | CGGAGTCGGCTTCTCTTGTGGTTGAAGGAGAAACCTGTCCCAGCTTaGCTCACTAGTTTCACCAGGATAGTTTTTGACTTGCTCTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: RSRLLLWLKEKPVPA*LTSFTRIVFDLLLA Trigger: TGCCAAGAGCAAGTCAAAAACTATCCTGGTGAAACTAGTGAGCCAAGCTGGGACAGGTTTCTCCTTCAACCACAAGAGAAGCCGACTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031024.14 ENSMUST00000201910.4 |
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| CDS-3UTR CAA 90 bp | CAAAGGCAGGTCATTTCTGACCTTAAACCTCATGTTCTAGAAATGACTTCAGTTCGGAGTCGGCTTCTCTaGTGGTTGAAGGAGAAACCT | + |
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Preference number: 5 (lower is better) Translates to: QRQVISDLKPHVLEMTSVRSRLL*WLKEKP Trigger: AGGTTTCTCCTTCAACCACAAGAGAAGCCGACTCCG...AACTGAAGTCATTTCTAGAACATGAGGTTTAAGGTCAGAAATGACCTGCCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS-3UTR CAA 90 bp | GTGCCTCACCCTCGAGCTTCTCATTTAGGAATCAAATTCATTTTCAATCCACTAGTTTTTGACTTGCTCTaGGCAAAAGAGACAGCGGAG | + |
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Preference number: 5 (lower is better) Translates to: VPHPRASHLGIKFIFNPLVFDLL*AKETAE Trigger: CTCCGCTGTCTCTTTTGCCAAGAGCAAGTCAAAAAC...TAGTGGATTGAAAATGAATTTGATTCCTAAATGAGAAGCTCGAGGGTGAGGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031024.14 |
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| CDS-3UTR CAA 90 bp | TTGGTTGTTTATTTGTCTCATAGATTCCAGGATGGCTTTGAATTTCTGATCCTCGTTTTTGACTTGCTCTaGGCAAAAGAGACAGCGGAG | + |
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Preference number: 5 (lower is better) Translates to: LVVYLSHRFQDGFEFLILVFDLL*AKETAE Trigger: CTCCGCTGTCTCTTTTGCCAAGAGCAAGTCAAAAAC...GAGGATCAGAAATTCAAAGCCATCCTGGAATCTATGAGACAAATAAACAACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS-3UTR CAA 90 bp | GTGCCTCACCCTCGAGCTTCTCATTTAGGAATCAAATTCATTTTCAATCCACTAAGGATAGTTTTTGACTaGCTCTTGGCAAAAGAGACA | + |
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Preference number: 5 (lower is better) Translates to: VPHPRASHLGIKFIFNPLRIVFD*LLAKET Trigger: TGTCTCTTTTGCCAAGAGCAAGTCAAAAACTATCCT...TAGTGGATTGAAAATGAATTTGATTCCTAAATGAGAAGCTCGAGGGTGAGGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031024.14 |
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| CDS-3UTR CAA 90 bp | TTTAGTGGGATGGAACTTCTCAAAGAATGGCTTCATCCTGCATCTTCATTACTGAGGATAGTTTTTGACTaGCTCTTGGCAAAAGAGACA | + |
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Preference number: 5 (lower is better) Translates to: FSGMELLKEWLHPASSLLRIVFD*LLAKET Trigger: TGTCTCTTTTGCCAAGAGCAAGTCAAAAACTATCCT...CAGTAATGAAGATGCAGGATGAAGCCATTCTTTGAGAAGTTCCATCCCACTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS CAA 72 bp | TGCAGAAGGCTCAGCTTCTCTCGGAGTCGGCTTCTCTaGTGGTTGAAGGAGAAACCTGTCCCAGCTTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: CRRLSFSRSRLL*WLKEKPVPAWL Trigger: GAGCCAAGCTGGGACAGGTTTCTCCTTCAACCACAAGAGAAGCCGACTCCGAGAGAAGCTGAGCCTTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031024.14 ENSMUST00000201910.4 |
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| CDS TCA 72 bp | GGCTCAGCTTCTCTCGGAGTCGGCTTCTCTTGTGGTTaGAGGAGAAACCTGTCCCAGCTTGGCTCACTAGTT | + |
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Preference number: 6 (lower is better) Translates to: GSASLGVGFSCG*RRNLSQLGSLV Trigger: AACTAGTGAGCCAAGCTGGGACAGGTTTCTCCTTCAACCACAAGAGAAGCCGACTCCGAGAGAAGCTGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031024.14 ENSMUST00000201910.4 |
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| CDS CCA 72 bp | AGAAGGCTCAGCTTCTCTCGGAGTCGGCTTCTCTTGTaGTTGAAGGAGAAACCTGTCCCAGCTTGGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: RRLSFSRSRLLL*LKEKPVPAWLT Trigger: AGTGAGCCAAGCTGGGACAGGTTTCTCCTTCAACCACAAGAGAAGCCGACTCCGAGAGAAGCTGAGCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031024.14 ENSMUST00000201910.4 |
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| CDS TCA 72 bp | GTGGTGCCTGAGGCAAGAGTTGAAAATTTCCAAGGCTaGGAGATTCTTCACTCGGGTTTGATAGTTGCTACT | + |
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Preference number: 6 (lower is better) Translates to: VVPEARVENFQG*EILHSGLIVAT Trigger: AGTAGCAACTATCAAACCCGAGTGAAGAATCTCTCAGCCTTGGAAATTTTCAACTCTTGCCTCAGGCACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS GCA 72 bp | GATTCTTCACTCGGGTTTGATAGTTGCTACTGGTGTTaGCTATTGGATCATAGTGCAGAAGGCTCAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: DSSLGFDSCYWC*LLDHSAEGSAS Trigger: AGAAGCTGAGCCTTCTGCACTATGATCCAATAGGCAACACCAGTAGCAACTATCAAACCCGAGTGAAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS GCA 72 bp | CCAAGGCTGAGAGATTCTTCACTCGGGTTTGATAGTTaGTACTGGTGTTGCCTATTGGATCATAGTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: PRLRDSSLGFDS*YWCCLLDHSAE Trigger: TTCTGCACTATGATCCAATAGGCAACACCAGTAGCAACTATCAAACCCGAGTGAAGAATCTCTCAGCCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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| CDS CCA 72 bp | CTGAGAGATTCTTCACTCGGGTTTGATAGTTGCTACTaGTGTTGCCTATTGGATCATAGTGCAGAAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LRDSSLGFDSCY*CCLLDHSAEGS Trigger: TGAGCCTTCTGCACTATGATCCAATAGGCAACACCAGTAGCAACTATCAAACCCGAGTGAAGAATCTCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201910.4 |
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