Pregenerated sensors for MRPL32 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015672Ensembl transcript IDs: ENSMUST00000015816.5, ENSMUST00000220621.2, ENSMUST00000221699.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTGGAAGACACCCAGATGTTTGACCAGTGTGCGAGAGCTGGCCTaGTGCAGCACTGGGGAGAGTGACCAGCACCTGGACCATCAAATA | + |
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Preference number: 1 (lower is better) Translates to: RWKTPRCLTSVRELA*CSTGESDQHLDHQI Trigger: TATTTGATGGTCCAGGTGCTGGTCACTCTCCCCAGTGCTGCAGCAGGCCAGCTCTCGCACACTGGTCAAACATCTGGGTGTCTTCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR CCA 90 bp | GAGGTCGGGAGAAAAAGGCTGGGAGAGTGTCACCTGACTCCCAGGTaGGAGAGAGAAGCCCTGAACACAGGGATGCTCGACTTAGTTCTA | + |
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Preference number: 1 (lower is better) Translates to: EVGRKRLGECHLTPR*EREALNTGMLDLVL Trigger: TAGAACTAAGTCGAGCATCCCTGTGTTCAGGGCTTCTCTCTCCCACCTGGGAGTCAGGTGACACTCTCCCAGCCTTTTTCTCCCGACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR GCA 90 bp | TGGAAGACACCCAGATGTTTGACCAGTGTGCGAGAGCTGGCCTGCTaGAGCACTGGGGAGAGTGACCAGCACCTGGACCATCAAATAAAA | + |
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Preference number: 1 (lower is better) Translates to: WKTPRCLTSVRELAC*STGESDQHLDHQIK Trigger: TTTTATTTGATGGTCCAGGTGCTGGTCACTCTCCCCAGTGCTGCAGCAGGCCAGCTCTCGCACACTGGTCAAACATCTGGGTGTCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR TCA 90 bp | ATCCTGGCTGGCCTGAAATTCAAGATATCCTCCTGCTTCTACTCCTaGATACAAATGAGTGTACCACATACCTGTTCTAAATTCTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: ILAGLKFKISSCFYS*IQMSVPHTCSKFFS Trigger: AGAAAAGAATTTAGAACAGGTATGTGGTACACTCATTTGTATTCAGGAGTAGAAGCAGGAGGATATCTTGAATTTCAGGCCAGCCAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
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| 3UTR CAA 90 bp | GGCTGCATTCAACACTGCACACTGCTCTCTTCCCCTGGAGTAACCTaGCCCTCTAGCCACAGGCTGGTGGCTTTGATAGGAGGCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: GCIQHCTLLSSPGVT*PSSHRLVALIGGKC Trigger: ACATTTGCCTCCTATCAAAGCCACCAGCCTGTGGCTAGAGGGCAAGGTTACTCCAGGGGAAGAGAGCAGTGTGCAGTGTTGAATGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGTCCTGGTGACATGGGCACAGGAGCTGGCCCTGAAGGCATGGGTATGAGAGGAGATGAGTGGGACTaGGGTGCATTGAAATTCACA | + |
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Preference number: 2 (lower is better) Translates to: NGPGDMGTGAGPEGMGMRGDEWD*GALKFT Trigger: TGTGAATTTCAATGCACCTCAGTCCCACTCATCTCC...TCTCATACCCATGCCTTCAGGGCCAGCTCCTGTGCCCATGTCACCAGGACCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR CAA 90 bp | CTAACCAACTCAGCTATCATCCAGGCCCAGATTCAGGGCTTTAAGTaGGCCCACCCCAACCACCACCCCATCTATGAACTGTTAATGCAC | + |
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Preference number: 2 (lower is better) Translates to: LTNSAIIQAQIQGFK*AHPNHHPIYELLMH Trigger: GTGCATTAACAGTTCATAGATGGGGTGGTGGTTGGGGTGGGCCAACTTAAAGCCCTGAATCTGGGCCTGGATGATAGCTGAGTTGGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAACGGAAGGAGCTCTGAAAGGACCTCCTTCTTGAGCCCCTATTTGTTGTCTCATGTGCTAGCTCTGTaGGGATGGATGGTCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LNGRSSERTSFLSPYLLSHVLAL*GWMVSG Trigger: TCCAGAGACCATCCATCCTCACAGAGCTAGCACATG...AGACAACAAATAGGGGCTCAAGAAGGAGGTCCTTTCAGAGCTCCTTCCGTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015816.5 ENSMUST00000221699.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAGGAGTCTTGTTCCTGACTTCCACTCAACAGAATCCAGTAGCTCCTGCCCTGGCTGCATTCAACACTaGACACTGCTCTCTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: MRSLVPDFHSTESSSSCPGCIQH*TLLSSP Trigger: AGGGGAAGAGAGCAGTGTGCAGTGTTGAATGCAGCC...AGGGCAGGAGCTACTGGATTCTGTTGAGTGGAAGTCAGGAACAAGACTCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTACCAGCATTGTCGGCAGGTGGAAGACACCCAGATGTTTGACCAGTGTGAGAAGGAGGGACAGGTaGGGTGTAGACATTGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: MATSIVGRWKTPRCLTSVRRRDR*GVDIGN Trigger: ATTTCCAATGTCTACACCCCACCTGTCCCTCCTTCT...CACACTGGTCAAACATCTGGGTGTCTTCCACCTGCCGACAATGCTGGTAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCAAGTACCCAAGAGGTCGGGAGAAAAAGGCTGGGAGAGTGTCACCTGACTAGCTCTGAGTTTAACTaGCTGAGTCTAGGAGACTCA | + |
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Preference number: 2 (lower is better) Translates to: SASTQEVGRKRLGECHLTSSEFN*LSLGDS Trigger: TGAGTCTCCTAGACTCAGGCAGTTAAACTCAGAGCT...AGTCAGGTGACACTCTCCCAGCCTTTTTCTCCCGACCTCTTGGGTACTTGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAACGGAAGGAGCTCTGAAAGGACCTCCTTCTTGAGCCCCTATTTGTTGTCTTGTTTCTGCTTCAGGTaGCCACATTCAGGGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: LNGRSSERTSFLSPYLLSCFCFR*PHSGQM Trigger: CATTTGCCCTGAATGTGGTCACCTGAAGCAGAAACA...AGACAACAAATAGGGGCTCAAGAAGGAGGTCCTTTCAGAGCTCCTTCCGTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015816.5 ENSMUST00000221699.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAGGAGTCTTGTTCCTGACTTCCACTCAACAGAATCCAGTAGCTCCTGCCCTGTATCCTGGCTGGCCTaGAATTCAAGATATCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: MRSLVPDFHSTESSSSCPVSWLA*NSRYPP Trigger: AGGAGGATATCTTGAATTTCAGGCCAGCCAGGATAC...AGGGCAGGAGCTACTGGATTCTGTTGAGTGGAAGTCAGGAACAAGACTCCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGAGTCTTGTTCCTGACTTCCACTCAACAGAATCCAGTAGCTCCTGCCCTCGGCAGTTCCTAATGTaGTTCAAAGGTAGAAACTGT | + |
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Preference number: 2 (lower is better) Translates to: MRSLVPDFHSTESSSSCPRQFLM*FKGRNC Trigger: ACAGTTTCTACCTTTGAACCACATTAGGAACTGCCG...AGGGCAGGAGCTACTGGATTCTGTTGAGTGGAAGTCAGGAACAAGACTCCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR TCA 90 bp | TATCCTGGCTGGCCTGAAATTCAAGATATCCTCCTGCTTCTACTCCTGAATACATGTTTCTGCTTCAGGTaGCCACATTCAGGGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: YPGWPEIQDILLLLLLNTCFCFR*PHSGQM Trigger: CATTTGCCCTGAATGTGGTCACCTGAAGCAGAAACA...TGTATTCAGGAGTAGAAGCAGGAGGATATCTTGAATTTCAGGCCAGCCAGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221699.2 |
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| 3UTR-3UTR TCA 90 bp | TATCCTGGCTGGCCTGAAATTCAAGATATCCTCCTGCTTCTACTCCTGAATACAGCCCTGATCCTTTTCTaGTGGTTTCTCTCCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: YPGWPEIQDILLLLLLNTALILF*WFLSCV Trigger: TACACAGGAGAGAAACCATCAGAAAAGGATCAGGGC...TGTATTCAGGAGTAGAAGCAGGAGGATATCTTGAATTTCAGGCCAGCCAGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221699.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCACAATGTCTATAGATATTGTCAAATATCATGTGGAAGCAGAAAGGAAGTTCAGCACTGGGGAGAGTaGCCAGCACCTGGACCATCA | + |
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Preference number: 2 (lower is better) Translates to: THNVYRYCQISCGSRKEVQHWGE*PAPGPS Trigger: TGATGGTCCAGGTGCTGGTCACTCTCCCCAGTGCTG...AACTTCCTTTCTGCTTCCACATGATATTTGACAATATCTATAGACATTGTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR TCA 90 bp | TATCCTGGCTGGCCTGAAATTCAAGATATCCTCCTGCTTCTACTCCTGAATACAACAATCCTCTTGCCCTaGTCCTTTTCTGATGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: YPGWPEIQDILLLLLLNTTILLP*SFSDGF Trigger: GAAACCATCAGAAAAGGATCAGGGCAAGAGGATTGT...TGTATTCAGGAGTAGAAGCAGGAGGATATCTTGAATTTCAGGCCAGCCAGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221699.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCACAATGTCTATAGATATTGTCAAATATCATGTGGAAGCAGAAAGGAAGTTCACAGGAGCTGGCCCTaGAGGCATGGGTATGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: THNVYRYCQISCGSRKEVHRSWP*RHGYES Trigger: ACTCTCATACCCATGCCTTCAGGGCCAGCTCCTGTG...AACTTCCTTTCTGCTTCCACATGATATTTGACAATATCTATAGACATTGTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCACAATGTCTATAGATATTGTCAAATATCATGTGGAAGCAGAAAGGAAGTTCACCTGACTCCCAGGTaGGAGAGAGAAGCCCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: THNVYRYCQISCGSRKEVHLTPR*EREALN Trigger: GTTCAGGGCTTCTCTCTCCCACCTGGGAGTCAGGTG...AACTTCCTTTCTGCTTCCACATGATATTTGACAATATCTATAGACATTGTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR CCA 90 bp | TATCCTGGCTGGCCTGAAATTCAAGATATCCTCCTGCTTCTACTCCTGAATACACTGGGTGAACCAAGATaGCCTCTTTATGTTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: YPGWPEIQDILLLLLLNTLGEPR*PLYVSF Trigger: GAAAGAAACATAAAGAGGCCATCTTGGTTCACCCAG...TGTATTCAGGAGTAGAAGCAGGAGGATATCTTGAATTTCAGGCCAGCCAGGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221699.2 |
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| 3UTR-3UTR CCA 90 bp | TATTTATTTGAAAGGTTTATCTTGGGTTTGCTTTCTCACAAGCATCTACGACGATTCAGGGCTTTAAGTTaGCCCACCCCAACCACCACC | + |
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Preference number: 2 (lower is better) Translates to: YLFERFILGLLSHKHLRRFRALS*PTPTTT Trigger: GGTGGTGGTTGGGGTGGGCCAACTTAAAGCCCTGAA...TCGTCGTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTATTTATTTGAAAGGTTTATCTTGGGTTTGCTTTCTCACAAGCATCTACGAGGGCATGAGAGCTGGTaGGCTAACCAACTCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: GYLFERFILGLLSHKHLRGHESW*ANQLSY Trigger: ATAGCTGAGTTGGTTAGCCCACCAGCTCTCATGCCC...TCGTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR TCA 90 bp | TATTTATTTGAAAGGTTTATCTTGGGTTTGCTTTCTCACAAGCATCTACGACGACATGTGCTAGCTCTGTaGGGATGGATGGTCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: YLFERFILGLLSHKHLRRHVLAL*GWMVSG Trigger: TCCAGAGACCATCCATCCTCACAGAGCTAGCACATG...TCGTCGTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221699.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCAAGATATCCTCCTGCTTCTACTCCTGAATACAAATGAGTGTACCACATACGTATCCTGGCTGGCCTaGAATTCAAGATATCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: IQDILLLLLLNTNECTTYVSWLA*NSRYPP Trigger: AGGAGGATATCTTGAATTTCAGGCCAGCCAGGATAC...GTATGTGGTACACTCATTTGTATTCAGGAGTAGAAGCAGGAGGATATCTTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
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| 3UTR-3UTR GCA 90 bp | TATCCTGGCTGGCCTGAAATTCAAGATATCCTCCTGCTTCTACTCCTGAATACAGGTTTATCTTGGGTTTaGTTTCTCACAAGCATCTAC | + |
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Preference number: 2 (lower is better) Translates to: YPGWPEIQDILLLLLLNTGLSWV*FLTSIY Trigger: GTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACC...TGTATTCAGGAGTAGAAGCAGGAGGATATCTTGAATTTCAGGCCAGCCAGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTATTTATTTGAAAGGTTTATCTTGGGTTTGCTTTCTCACAAGCATCTACGAGGGACTGAGGTGCATTaGAATTCACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: GYLFERFILGLLSHKHLRGTEVH*NSHTHT Trigger: TGTGTGTGTGTGTGAATTTCAATGCACCTCAGTCCC...TCGTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATACCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGTCCTGCAGACCCAATCTGAAAGAAATACCAGTAAGAATCCAGCATTGATAGGTTTATCTTGGGTTTaGTTTCTCACAAGCATCTAC | + |
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Preference number: 2 (lower is better) Translates to: PVLQTQSERNTSKNPALIGLSWV*FLTSIY Trigger: GTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACC...TATCAATGCTGGATTCTTACTGGTATTTCTTTCAGATTGGGTCTGCAGGACTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAACTTATGTTATCAAATTCAGAGGACCCCTGATGGCTACCAGCATTGTCGGTTGAAAGGTTTATCTTaGGTTTGCTTTCTCACAAGC | + |
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Preference number: 2 (lower is better) Translates to: QNLCYQIQRTPDGYQHCRLKGLS*VCFLTS Trigger: GCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAA...CCGACAATGCTGGTAGCCATCAGGGGTCCTCTGAATTTGATAACATAAGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCAAGATATCCTCCTGCTTCTACTCCTGAATACAAATGAGTGTACCACATACACTTTGTATCCTGGCTaGCCTGAAATTCAAGATATC | + |
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Preference number: 2 (lower is better) Translates to: IQDILLLLLLNTNECTTYTLYPG*PEIQDI Trigger: GATATCTTGAATTTCAGGCCAGCCAGGATACAAAGT...GTATGTGGTACACTCATTTGTATTCAGGAGTAGAAGCAGGAGGATATCTTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
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| 3UTR CAA 90 bp | ATTTTCAACAACTGGTACTTTAAAGGCCCTACTCTGGGTATTTATTaGAAAGGTTTATCTTGGGTTTGCTTTCTCACAAGCATCTACGAC | + |
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Preference number: 2 (lower is better) Translates to: IFNNWYFKGPTLGIY*KGLSWVCFLTSIYD Trigger: GTCGTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATACCCAGAGTAGGGCCTTTAAAGTACCAGTTGTTGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCAAGATATCCTCCTGCTTCTACTCCTGAATACAAATGAGTGTACCACATACTTGAAAGGTTTATCTTaGGTTTGCTTTCTCACAAGC | + |
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Preference number: 2 (lower is better) Translates to: IQDILLLLLLNTNECTTYLKGLS*VCFLTS Trigger: GCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAA...GTATGTGGTACACTCATTTGTATTCAGGAGTAGAAGCAGGAGGATATCTTGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCACAATGTCTATAGATATTGTCAAATATCATGTGGAAGCAGAAAGGAAGTTTACATTTTCAACAACTaGTACTTTAAAGGCCCTACT | + |
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Preference number: 2 (lower is better) Translates to: THNVYRYCQISCGSRKEVYIFNN*YFKGPT Trigger: AGTAGGGCCTTTAAAGTACCAGTTGTTGAAAATGTA...AACTTCCTTTCTGCTTCCACATGATATTTGACAATATCTATAGACATTGTGGGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR GCA 72 bp | CCCAGATGTTTGACCAGTGTGCGAGAGCTGGCCTGCTaGAGCACTGGGGAGAGTGACCAGCACCTGGACCAT | + |
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Preference number: 3 (lower is better) Translates to: PRCLTSVRELAC*STGESDQHLDH Trigger: ATGGTCCAGGTGCTGGTCACTCTCCCCAGTGCTGCAGCAGGCCAGCTCTCGCACACTGGTCAAACATCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR GCA 72 bp | ACACCCAGATGTTTGACCAGTGTGCGAGAGCTGGCCTaGTGCAGCACTGGGGAGAGTGACCAGCACCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: TPRCLTSVRELA*CSTGESDQHLD Trigger: GTCCAGGTGCTGGTCACTCTCCCCAGTGCTGCAGCAGGCCAGCTCTCGCACACTGGTCAAACATCTGGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR CCA 72 bp | AGAGGACCCCTGATGGCTACCAGCATTGTCGGCAGGTaGAAGACACCCAGATGTTTGACCAGTGTGCGAGAG | + |
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Preference number: 3 (lower is better) Translates to: RGPLMATSIVGR*KTPRCLTSVRE Trigger: CTCTCGCACACTGGTCAAACATCTGGGTGTCTTCCACCTGCCGACAATGCTGGTAGCCATCAGGGGTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR CCA 72 bp | AGAAAAAGGCTGGGAGAGTGTCACCTGACTCCCAGGTaGGAGAGAGAAGCCCTGAACACAGGGATGCTCGAC | + |
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Preference number: 3 (lower is better) Translates to: RKRLGECHLTPR*EREALNTGMLD Trigger: GTCGAGCATCCCTGTGTTCAGGGCTTCTCTCTCCCACCTGGGAGTCAGGTGACACTCTCCCAGCCTTTTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR TCA 72 bp | TGTGCGAGAGCTGGCCTGCTGCAGCACTGGGGAGAGTaGCCAGCACCTGGACCATCAAATAAAATAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: CARAGLLQHWGE*PAPGPSNKIEQ Trigger: CTGCTCTATTTTATTTGATGGTCCAGGTGCTGGTCACTCTCCCCAGTGCTGCAGCAGGCCAGCTCTCGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR CCA 72 bp | CAGCTATCATCCAGGCCCAGATTCAGGGCTTTAAGTTaGCCCACCCCAACCACCACCCCATCTATGAACTGT | + |
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Preference number: 3 (lower is better) Translates to: QLSSRPRFRALS*PTPTTTPSMNC Trigger: ACAGTTCATAGATGGGGTGGTGGTTGGGGTGGGCCAACTTAAAGCCCTGAATCTGGGCCTGGATGATAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGCTACCAGCATTGTCGGCAGGTGGAAGACACCCAGATGTTTGACCAGTGTGAGACAGAATCTCACTTaGTATCCTGGCTGGCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: MATSIVGRWKTPRCLTSVRQNLT*YPGWPE Trigger: TTCAGGCCAGCCAGGATACAAAGTGAGATTCTGTCT...CACACTGGTCAAACATCTGGGTGTCTTCCACCTGCCGACAATGCTGGTAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR TCA 72 bp | GTCTCAACGGAAGGAGCTCTGAAAGGACCTCCTTCTTaGGCCCCTATTTGTTGTCTGATTTTTGTCGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: VSTEGALKGPPS*APICCLIFVVS Trigger: GGAGACGACAAAAATCAGACAACAAATAGGGGCTCAAGAAGGAGGTCCTTTCAGAGCTCCTTCCGTTGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015816.5 ENSMUST00000221699.2 |
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| 3UTR TCA 72 bp | GTTGAGGACAGGGAGATGAGTGGGACTGAGGTGCATTaGAATTCACACACACACACACACACACACACACAA | + |
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Preference number: 3 (lower is better) Translates to: VEDREMSGTEVH*NSHTHTHTHTQ Trigger: TTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATTTCAATGCACCTCAGTCCCACTCATCTCCCTGTCCTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTATTTATTTGAAAGGTTTATCTTGGGTTTGCTTTCTCACAAGCATCTACGATCCAGCATTGATAGGTaGCTAGGGTTGAGGACAGGG | + |
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Preference number: 3 (lower is better) Translates to: GYLFERFILGLLSHKHLRSSIDR*LGLRTG Trigger: CCCTGTCCTCAACCCTAGCAACCTATCAATGCTGGA...TCGTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR TCA 72 bp | TTTGAGACAGAATCTCACTTTGTATCCTGGCTGGCCTaGAATTCAAGATATCCTCCTGCTTCTACTCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: FETESHFVSWLA*NSRYPPASTPE Trigger: TTCAGGAGTAGAAGCAGGAGGATATCTTGAATTTCAGGCCAGCCAGGATACAAAGTGAGATTCTGTCTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAACTTATGTTATCAAATTCAGAGGACCCCTGATGGCTACCAGCATTGTCGGAGGTTTATCTTGGGTTaGCTTTCTCACAAGCATCTA | + |
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Preference number: 3 (lower is better) Translates to: QNLCYQIQRTPDGYQHCRRFILG*LSHKHL Trigger: TAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCT...CCGACAATGCTGGTAGCCATCAGGGGTCCTCTGAATTTGATAACATAAGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAACTTATGTTATCAAATTCAGAGGACCCCTGATGGCTACCAGCATTGTCGGTTTGAAAGGTTTATCTaGGGTTTGCTTTCTCACAAG | + |
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Preference number: 3 (lower is better) Translates to: QNLCYQIQRTPDGYQHCRFERFI*GLLSHK Trigger: CTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAA...CCGACAATGCTGGTAGCCATCAGGGGTCCTCTGAATTTGATAACATAAGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
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| 3UTR-3UTR CAA 90 bp | TATTTATTTGAAAGGTTTATCTTGGGTTTGCTTTCTCACAAGCATCTACGACGAGAAAGGACCTCCTTCTaGAGCCCCTATTTGTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: YLFERFILGLLSHKHLRRERTSF*SPYLLS Trigger: AGACAACAAATAGGGGCTCAAGAAGGAGGTCCTTTC...TCGTCGTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221699.2 |
||
| 3UTR TCA 72 bp | GGCCTGAAATTCAAGATATCCTCCTGCTTCTACTCCTaGATACAAATGAGTGTACCACATACCTGTTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLKFKISSCFYS*IQMSVPHTCSK Trigger: TTTAGAACAGGTATGTGGTACACTCATTTGTATTCAGGAGTAGAAGCAGGAGGATATCTTGAATTTCAGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
||
| 3UTR TCA 72 bp | ACTGGTACTTTAAAGGCCCTACTCTGGGTATTTATTTaGAAGGTTTATCTTGGGTTTGCTTTCTCACAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TGTLKALLWVFI*KVYLGFAFSQA Trigger: TGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATACCCAGAGTAGGGCCTTTAAAGTACCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| 3UTR GCA 72 bp | ACTCTGGGTATTTATTTGAAAGGTTTATCTTGGGTTTaGTTTCTCACAAGCATCTACGACGACAATGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: TLGIYLKGLSWV*FLTSIYDDNGM Trigger: CATTCCATTGTCGTCGTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATACCCAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
||
| 3UTR CCA 72 bp | GCTGGTGGCTTTGATAGGAGGCAAATGTCTATAGTATaGCTAGGTCTGATAGTTTATTACTTAAGAAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: AGGFDRRQMSIV*LGLIVYYLRKV Trigger: GACTTTTCTTAAGTAATAAACTATCAGACCTAGCCATACTATAGACATTTGCCTCCTATCAAAGCCACCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| 3UTR-3UTR CAA 90 bp | TATTTATTTGAAAGGTTTATCTTGGGTTTGCTTTCTCACAAGCATCTACGACGATTGAGCCCCTATTTGTaGTCTGATTTTTGTCGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: YLFERFILGLLSHKHLRRLSPYL*SDFCRL Trigger: GAGACGACAAAAATCAGACAACAAATAGGGGCTCAA...TCGTCGTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221699.2 |
||
| 3UTR TCA 72 bp | TCAAGATATCCTCCTGCTTCTACTCCTGAATACAAATaGGTGTACCACATACCTGTTCTAAATTCTTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SRYPPASTPEYK*VYHIPVLNSFL Trigger: GAGAAAAGAATTTAGAACAGGTATGTGGTACACTCATTTGTATTCAGGAGTAGAAGCAGGAGGATATCTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
||
| 3UTR TCA 72 bp | TCAAATATCATGTGGAAGCAGAAAGGAAGTTATTCCTaGTTAGAACCATGGAACTCAAATAGTATCAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SNIMWKQKGSYS*LEPWNSNSIKV Trigger: GACCTTGATACTATTTGAGTTCCATGGTTCTAATCAGGAATAACTTCCTTTCTGCTTCCACATGATATTTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| 3UTR TCA 72 bp | AGTGTACCACATACCTGTTCTAAATTCTTTTCTCACTaGCACAACTGCTTAATTAAAACCCAACAGCATTAT | + |
|
Preference number: 3 (lower is better) Translates to: SVPHTCSKFFSH*HNCLIKTQQHY Trigger: ATAATGCTGTTGGGTTTTAATTAAGCAGTTGTGTCAGTGAGAAAAGAATTTAGAACAGGTATGTGGTACACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
||
| CDS-3UTR CCA 90 bp | CTCAACGGAAGGAGCTCTGAAAGGACCTCCTTCTTGAGCCCCTATTTGTTGTCTAGCTCCCAGCACCTCTaGAGCGGTCCGGGACGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LNGRSSERTSFLSPYLLSSSQHL*SGPGRT Trigger: GGTGCGTCCCGGACCGCTCCAGAGGTGCTGGGAGCT...AGACAACAAATAGGGGCTCAAGAAGGAGGTCCTTTCAGAGCTCCTTCCGTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015816.5 ENSMUST00000221699.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGAGTCTTGTTCCTGACTTCCACTCAACAGAATCCAGTAGCTCCTGCCCTAGCTCCCAGCACCTCTaGAGCGGTCCGGGACGCACC | + |
|
Preference number: 4 (lower is better) Translates to: MRSLVPDFHSTESSSSCPSSQHL*SGPGRT Trigger: GGTGCGTCCCGGACCGCTCCAGAGGTGCTGGGAGCT...AGGGCAGGAGCTACTGGATTCTGTTGAGTGGAAGTCAGGAACAAGACTCCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| 3UTR CAA 72 bp | ACCAGCATTGTCGGCAGGTGGAAGACACCCAGATGTTaGACCAGTGTGCGAGAGCTGGCCTGCTGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TSIVGRWKTPRC*TSVRELACCST Trigger: AGTGCTGCAGCAGGCCAGCTCTCGCACACTGGTCAAACATCTGGGTGTCTTCCACCTGCCGACAATGCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| 3UTR CAA 72 bp | CAACACTGCACACTGCTCTCTTCCCCTGGAGTAACCTaGCCCTCTAGCCACAGGCTGGTGGCTTTGATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QHCTLLSSPGVT*PSSHRLVALIG Trigger: TCCTATCAAAGCCACCAGCCTGTGGCTAGAGGGCAAGGTTACTCCAGGGGAAGAGAGCAGTGTGCAGTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| 3UTR CAA 72 bp | TCAGCTATCATCCAGGCCCAGATTCAGGGCTTTAAGTaGGCCCACCCCAACCACCACCCCATCTATGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SAIIQAQIQGFK*AHPNHHPIYEL Trigger: CAGTTCATAGATGGGGTGGTGGTTGGGGTGGGCCAACTTAAAGCCCTGAATCTGGGCCTGGATGATAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| CDS-3UTR GCA 90 bp | CTCAACGGAAGGAGCTCTGAAAGGACCTCCTTCTTGAGCCCCTATTTGTTGTCTAAGCGACTCCAGCTCTaGTGCAGTTGCCGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNGRSSERTSFLSPYLLSKRLQL*CSCRCS Trigger: GCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTT...AGACAACAAATAGGGGCTCAAGAAGGAGGTCCTTTCAGAGCTCCTTCCGTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015816.5 ENSMUST00000221699.2 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGATATCCTCCTGCTTCTACTCCTGAATACAAATGAGTGTACCACATACAGCTCCCAGCACCTCTaGAGCGGTCCGGGACGCACC | + |
|
Preference number: 4 (lower is better) Translates to: IQDILLLLLLNTNECTTYSSQHL*SGPGRT Trigger: GGTGCGTCCCGGACCGCTCCAGAGGTGCTGGGAGCT...GTATGTGGTACACTCATTTGTATTCAGGAGTAGAAGCAGGAGGATATCTTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
||
| CDS-3UTR TCA 90 bp | CAAAACTTATGTTATCAAATTCAGAGGACCCCTGATGGCTACCAGCATTGTCGGCATGTGCTAGCTCTGTaGGGATGGATGGTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QNLCYQIQRTPDGYQHCRHVLAL*GWMVSG Trigger: TCCAGAGACCATCCATCCTCACAGAGCTAGCACATG...CCGACAATGCTGGTAGCCATCAGGGGTCCTCTGAATTTGATAACATAAGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| CDS-3UTR GCA 90 bp | CTGCAGACCCAATCTGAAAGAAATACCAGTAAGAATCCAGCATTGATAGGTTGCAAGCGACTCCAGCTCTaGTGCAGTTGCCGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQTQSERNTSKNPALIGCKRLQL*CSCRCS Trigger: GCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTT...GCAACCTATCAATGCTGGATTCTTACTGGTATTTCTTTCAGATTGGGTCTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| 3UTR CAA 72 bp | AGCTCTGAAAGGACCTCCTTCTTGAGCCCCTATTTGTaGTCTGATTTTTGTCGTCTCCTGGCGTACTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSERTSFLSPYL*SDFCRLLAYFL Trigger: GAGAAAGTACGCCAGGAGACGACAAAAATCAGACAACAAATAGGGGCTCAAGAAGGAGGTCCTTTCAGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015816.5 ENSMUST00000221699.2 |
||
| 3UTR CAA 72 bp | AGGAGCTCTGAAAGGACCTCCTTCTTGAGCCCCTATTaGTTGTCTGATTTTTGTCGTCTCCTGGCGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSSERTSFLSPY*LSDFCRLLAYF Trigger: AAAGTACGCCAGGAGACGACAAAAATCAGACAACAAATAGGGGCTCAAGAAGGAGGTCCTTTCAGAGCTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015816.5 ENSMUST00000221699.2 |
||
| CDS-3UTR GCA 90 bp | ATTCAAGATATCCTCCTGCTTCTACTCCTGAATACAAATGAGTGTACCACATACAAGCGACTCCAGCTCTaGTGCAGTTGCCGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQDILLLLLLNTNECTTYKRLQL*CSCRCS Trigger: GCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTT...GTATGTGGTACACTCATTTGTATTCAGGAGTAGAAGCAGGAGGATATCTTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
||
| CDS-3UTR TCA 90 bp | CTGCAGACCCAATCTGAAAGAAATACCAGTAAGAATCCAGCATTGATAGGTTGCTGTTTCTGCTTCAGGTaGCCACATTCAGGGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LQTQSERNTSKNPALIGCCFCFR*PHSGQM Trigger: CATTTGCCCTGAATGTGGTCACCTGAAGCAGAAACA...GCAACCTATCAATGCTGGATTCTTACTGGTATTTCTTTCAGATTGGGTCTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCTGCAGACCCAATCTGAAAGAAATACCAGTAAGAATCCAGCATTGATACTGGGTGAACCAAGATaGCCTCTTTATGTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVLQTQSERNTSKNPALILGEPR*PLYVSF Trigger: GAAAGAAACATAAAGAGGCCATCTTGGTTCACCCAG...TATCAATGCTGGATTCTTACTGGTATTTCTTTCAGATTGGGTCTGCAGGACTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| 3UTR CAA 72 bp | AGGCCCTACTCTGGGTATTTATTTGAAAGGTTTATCTaGGGTTTGCTTTCTCACAAGCATCTACGACGACAA | + |
|
Preference number: 4 (lower is better) Translates to: RPYSGYLFERFI*GLLSHKHLRRQ Trigger: TTGTCGTCGTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATACCCAGAGTAGGGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
||
| CDS-3UTR TCA 90 bp | GGGTATTTATTTGAAAGGTTTATCTTGGGTTTGCTTTCTCACAAGCATCTACGAACAATCCTCTTGCCCTaGTCCTTTTCTGATGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GYLFERFILGLLSHKHLRTILLP*SFSDGF Trigger: GAAACCATCAGAAAAGGATCAGGGCAAGAGGATTGT...TCGTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| 3UTR CAA 72 bp | ACTGTACCTTTAACTCTCACTAGTGACTTCACGAACTaGGAAAAGATGAATGAATACACAGGTCAATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVPLTLTSDFTN*EKMNEYTGQWG Trigger: TCCCCATTGACCTGTGTATTCATTCATCTTTTCCAAGTTCGTGAAGTCACTAGTGAGAGTTAAAGGTACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| 3UTR CAA 72 bp | AACTGGTACTTTAAAGGCCCTACTCTGGGTATTTATTaGAAAGGTTTATCTTGGGTTTGCTTTCTCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NWYFKGPTLGIY*KGLSWVCFLTS Trigger: GCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATACCCAGAGTAGGGCCTTTAAAGTACCAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| 3UTR CAA 72 bp | TACTCTGGGTATTTATTTGAAAGGTTTATCTTGGGTTaGCTTTCTCACAAGCATCTACGACGACAATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSGYLFERFILG*LSHKHLRRQWN Trigger: ATTCCATTGTCGTCGTAGATGCTTGTGAGAAAGCAAACCCAAGATAAACCTTTCAAATAAATACCCAGAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
||
| CDS GCA 90 bp | GGTGCCCACGGAGGACTGACAAAGCGACTCCAGCTCTGCTGCAGTTaGCGTTGTAGCAGCTCCCAGCACCTCTGGAGCGGTCCGGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: GAHGGLTKRLQLCCS*RCSSSQHLWSGPGR Trigger: GCGTCCCGGACCGCTCCAGAGGTGCTGGGAGCTGCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTTTGTCAGTCCTCCGTGGGCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| CDS GCA 90 bp | GGACCCCACGGAGGACTGACAAAGCGACTCCAGCTCTGCTGCAGTTaGCGTTGTAGCAGCTCCCAGCACCTCTGGAGCGGTCCGGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: GPHGGLTKRLQLCCS*RCSSSQHLWSGPGR Trigger: GCGTCCCGGACCGCTCCAGAGGTGCTGGGAGCTGCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTTTGTCAGTCCTCCGTGGGGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221699.2 |
||
| CDS CCA 90 bp | CTCCAGCTCTGCTGCAGTTGCCGTTGTAGCAGCTCCCAGCACCTCTaGAGCGGTCCGGGACGCACCGGCCATGGTAGTGAAAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQLCCSCRCSSSQHL*SGPGRTGHGSESSS Trigger: GCTGCTGCTTTCACTACCATGGCCGGTGCGTCCCGGACCGCTCCAGAGGTGCTGGGAGCTGCTACAACGGCAACTGCAGCAGAGCTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015816.5 ENSMUST00000220621.2 ENSMUST00000221699.2 |
||
| CDS GCA 90 bp | AATGCTGGTGCCCACGGAGGACTGACAAAGCGACTCCAGCTCTGCTaGAGTTGCCGTTGTAGCAGCTCCCAGCACCTCTGGAGCGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NAGAHGGLTKRLQLC*SCRCSSSQHLWSGP Trigger: CGGACCGCTCCAGAGGTGCTGGGAGCTGCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTTTGTCAGTCCTCCGTGGGCACCAGCATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| CDS GCA 90 bp | GCTAATGCTGGTGCCCACGGAGGACTGACAAAGCGACTCCAGCTCTaGTGCAGTTGCCGTTGTAGCAGCTCCCAGCACCTCTGGAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: ANAGAHGGLTKRLQL*CSCRCSSSQHLWSG Trigger: ACCGCTCCAGAGGTGCTGGGAGCTGCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTTTGTCAGTCCTCCGTGGGCACCAGCATTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| CDS TCA 90 bp | GGATGGATGGTCTCTGGACGGCTAATGCTGGTGCCCACGGAGGACTaGCAAAGCGACTCCAGCTCTGCTGCAGTTGCCGTTGTAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GWMVSGRLMLVPTED*QSDSSSAAVAVVAA Trigger: AGCTGCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTTTGTCAGTCCTCCGTGGGCACCAGCATTAGCCGTCCAGAGACCATCCATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTCCTGCAGACCCAATCTGAAAGAAATACCAGTAAGAATCCAGCATTGATAGAAAGGACCTCCTTCTaGAGCCCCTATTTGTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PVLQTQSERNTSKNPALIERTSF*SPYLLS Trigger: AGACAACAAATAGGGGCTCAAGAAGGAGGTCCTTTC...TATCAATGCTGGATTCTTACTGGTATTTCTTTCAGATTGGGTCTGCAGGACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTCCTGCAGACCCAATCTGAAAGAAATACCAGTAAGAATCCAGCATTGATATTGAGCCCCTATTTGTaGTCTGATTTTTGTCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PVLQTQSERNTSKNPALILSPYL*SDFCRL Trigger: GAGACGACAAAAATCAGACAACAAATAGGGGCTCAA...TATCAATGCTGGATTCTTACTGGTATTTCTTTCAGATTGGGTCTGCAGGACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| CDS GCA 72 bp | GCCCACGGAGGACTGACAAAGCGACTCCAGCTCTGCTaGAGTTGCCGTTGTAGCAGCTCCCAGCACCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AHGGLTKRLQLC*SCRCSSSQHLW Trigger: CCAGAGGTGCTGGGAGCTGCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTTTGTCAGTCCTCCGTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||
| CDS GCA 72 bp | CCCCACGGAGGACTGACAAAGCGACTCCAGCTCTGCTaGAGTTGCCGTTGTAGCAGCTCCCAGCACCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PHGGLTKRLQLC*SCRCSSSQHLW Trigger: CCAGAGGTGCTGGGAGCTGCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTTTGTCAGTCCTCCGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221699.2 |
||
| CDS GCA 72 bp | GGACCCCACGGAGGACTGACAAAGCGACTCCAGCTCTaGTGCAGTTGCCGTTGTAGCAGCTCCCAGCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPHGGLTKRLQL*CSCRCSSSQHL Trigger: GAGGTGCTGGGAGCTGCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTTTGTCAGTCCTCCGTGGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221699.2 |
||
| CDS GCA 72 bp | GGAGGACTGACAAAGCGACTCCAGCTCTGCTGCAGTTaGCGTTGTAGCAGCTCCCAGCACCTCTGGAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGLTKRLQLCCS*RCSSSQHLWSG Trigger: ACCGCTCCAGAGGTGCTGGGAGCTGCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTTTGTCAGTCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220621.2 ENSMUST00000221699.2 |
||
| CDS TCA 72 bp | GTCTCTGGACGGCTAATGCTGGTGCCCACGGAGGACTaGCAAAGCGACTCCAGCTCTGCTGCAGTTGCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: VSGRLMLVPTED*QSDSSSAAVAV Trigger: AACGGCAACTGCAGCAGAGCTGGAGTCGCTTTGTCAGTCCTCCGTGGGCACCAGCATTAGCCGTCCAGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220621.2 |
||