Pregenerated sensors for MRPL30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026087Ensembl transcript IDs: ENSMUST00000027256.12, ENSMUST00000193673.6, ENSMUST00000194857.6, ENSMUST00000195373.2
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAAATTCTCAAGGGACAAAGGGAGAGAACTGAACGAAGTGATAGCATCAGGACTGCGGAGATGACTGGATaGACATACACTTTAATGAGA | + |
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Preference number: 2 (lower is better) Translates to: KILKGQRERTERSDSIRTAEMTG*TYTLMR Trigger: TCTCATTAAAGTGTATGTTCATCCAGTCATCTCCGC...AGTCCTGATGCTATCACTTCGTTCAGTTCTCTCCCTTTGTCCCTTGAGAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027256.12 |
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| 3UTR-3UTR CCA 90 bp | GGTAGATATCTGAATAATTCAGTTATTGCCCACTGTGGAGTAAAATTCTCAAGGATCAGCGGAGATGACTaGATGAACATACACTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: GRYLNNSVIAHCGVKFSRISGDD*MNIHFN Trigger: ATTAAAGTGTATGTTCATCCAGTCATCTCCGCTGAT...CCTTGAGAATTTTACTCCACAGTGGGCAATAACTGAATTATTCAGATATCTACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027256.12 |
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| CDS-3UTR CCA 90 bp | CACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTGAAGCTGTGTTGTGGGAAGTCCCTGTaGCAGCTTCAGAGGCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: HFNENGFLSKCICELKLCCGKSL*QLQRLD Trigger: ATCCAGCCTCTGAAGCTGCCACAGGGACTTCCCACA...ACACAGCTTCAGCTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR CCA 90 bp | TTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTGAAGCTGTGTGGCGGCATGTGCTGGACATaGTCTCTTCTGTGGGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: FNENGFLSKCICELKLCGGMCWT*SLLWEV Trigger: GACTTCCCACAGAAGAGACCATGTCCAGCACATGCC...GCCACACAGCTTCAGCTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR CCA 90 bp | CACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTGAAGCTGTGTACATGGTCTCTTCTGTaGGAAGTCCCTGTGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HFNENGFLSKCICELKLCTWSLL*EVPVAA Trigger: AGCTGCCACAGGGACTTCCCACAGAAGAGACCATGT...ACACAGCTTCAGCTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR CCA 90 bp | GGAGATGACTGGATGAACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCGGCATGTGCTGGACATaGTCTCTTCTGTGGGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: GDDWMNIHFNENGFLSKCGMCWT*SLLWEV Trigger: GACTTCCCACAGAAGAGACCATGTCCAGCACATGCC...GCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTTCATCCAGTCATCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 |
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| CDS-3UTR GCA 90 bp | GATGACTGGATGAACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCCCTTTCTTCACAGTCTaGAGTCTGCATGGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: DDWMNIHFNENGFLSKCIPFFTV*SLHGGL Trigger: GAGGCCTCCATGCAGACTGCAGACTGTGAAGAAAGG...GATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTTCATCCAGTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 |
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| CDS-3UTR GCA 90 bp | AACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTGAAGCCTTTCTTCACAGTCTaGAGTCTGCATGGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: NIHFNENGFLSKCICELKPFFTV*SLHGGL Trigger: GAGGCCTCCATGCAGACTGCAGACTGTGAAGAAAGG...CTTCAGCTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR CCA 90 bp | AACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTGAAGGGCATGTGCTGGACATaGTCTCTTCTGTGGGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: NIHFNENGFLSKCICELKGMCWT*SLLWEV Trigger: GACTTCCCACAGAAGAGACCATGTCCAGCACATGCC...CTTCAGCTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR TCA 90 bp | AGCGGAGATGACTGGATGAACATACACTTTAATGAGAACGGTTTCCTTAGTAAGGTAGTCCAAGCATCTTaGTGGTATCTTTTTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SGDDWMNIHFNENGFLSKVVQAS*WYLFPS Trigger: ACTGGGAAAAAGATACCATCAAGATGCTTGGACTAC...CTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTTCATCCAGTCATCTCCGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 |
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| CDS-3UTR TCA 90 bp | ATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTGAAGCTGGTAGTCCAAGCATCTTaGTGGTATCTTTTTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: IHFNENGFLSKCICELKLVVQAS*WYLFPS Trigger: ACTGGGAAAAAGATACCATCAAGATGCTTGGACTAC...CAGCTTCAGCTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR TCA 90 bp | CACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTGAAGCTGTGTTCTTCAGGTTTAGGCTaGAACACTTTATCTGGAATT | + |
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Preference number: 4 (lower is better) Translates to: HFNENGFLSKCICELKLCSSGLG*NTLSGI Trigger: AATTCCAGATAAAGTGTTTCAGCCTAAACCTGAAGA...ACACAGCTTCAGCTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR TCA 90 bp | AACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTGAAGGTAGTCCAAGCATCTTaGTGGTATCTTTTTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: NIHFNENGFLSKCICELKVVQAS*WYLFPS Trigger: ACTGGGAAAAAGATACCATCAAGATGCTTGGACTAC...CTTCAGCTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR GCA 90 bp | TGGATGAACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGACCAATGAGAGATTCTaGACCTTTCTTCACAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: WMNIHFNENGFLSKCICETNERF*TFLHSL Trigger: CAGACTGTGAAGAAAGGTGCAGAATCTCTCATTGGT...CTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTTCATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR GCA 90 bp | ATGAACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTGACCAATGAGAGATTCTaGACCTTTCTTCACAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: MNIHFNENGFLSKCICELTNERF*TFLHSL Trigger: CAGACTGTGAAGAAAGGTGCAGAATCTCTCATTGGT...CAGCTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR GCA 90 bp | GACTGGATGAACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTACCAATGAGAGATTCTaGACCTTTCTTCACAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: DWMNIHFNENGFLSKCICTNERF*TFLHSL Trigger: CAGACTGTGAAGAAAGGTGCAGAATCTCTCATTGGT...ACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTTCATCCAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR CCA 90 bp | AACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTGAAGCTTTGCATTCACCGATaGGATGTTCTTGTGAATTTG | + |
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Preference number: 4 (lower is better) Translates to: NIHFNENGFLSKCICELKLCIHR*DVLVNL Trigger: CAAATTCACAAGAACATCCCATCGGTGAATGCAAAG...CTTCAGCTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR CCA 90 bp | TGGATGAACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTTTGCATTCACCGATaGGATGTTCTTGTGAATTTG | + |
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Preference number: 4 (lower is better) Translates to: WMNIHFNENGFLSKCICELCIHR*DVLVNL Trigger: CAAATTCACAAGAACATCCCATCGGTGAATGCAAAG...CTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTTCATCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR TCA 90 bp | ATGAACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTGTCTTCAGGTTTAGGCTaGAACACTTTATCTGGAATT | + |
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Preference number: 4 (lower is better) Translates to: MNIHFNENGFLSKCICELSSGLG*NTLSGI Trigger: AATTCCAGATAAAGTGTTTCAGCCTAAACCTGAAGA...CAGCTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR CCA 90 bp | CCTAATGGTAGATATCTGAATAATTCAGTTATTGCCCACTGTGGAGTAAAATTCCTTTGCATTCACCGATaGGATGTTCTTGTGAATTTG | + |
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Preference number: 4 (lower is better) Translates to: PNGRYLNNSVIAHCGVKFLCIHR*DVLVNL Trigger: CAAATTCACAAGAACATCCCATCGGTGAATGCAAAG...GAATTTTACTCCACAGTGGGCAATAACTGAATTATTCAGATATCTACCATTAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027256.12 |
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| CDS GCA 90 bp | ATCCATTCTGTACCAATGAGAGATTCTGCACCTTTCTTCACAGTCTaGAGTCTGCATGGAGGCCTCGGGAACGCGGAGCGCAGAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: IHSVPMRDSAPFFTV*SLHGGLGNAERRTP Trigger: TGGGGTTCTGCGCTCCGCGTTCCCGAGGCCTCCATGCAGACTGCAGACTGTGAAGAAAGGTGCAGAATCTCTCATTGGTACAGAATGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000194857.6 ENSMUST00000195373.2 |
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| CDS CCA 90 bp | CTTGAGGCATGTGCTGGACATGGTCTCTTCTGTGGGAAGTCCCTGTaGCAGCTTCAGAGGCTGGATGCGTATCAAGTGTTTAACCACTTT | + |
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Preference number: 5 (lower is better) Translates to: LEACAGHGLFCGKSL*QLQRLDAYQVFNHF Trigger: AAAGTGGTTAAACACTTGATACGCATCCAGCCTCTGAAGCTGCCACAGGGACTTCCCACAGAAGAGACCATGTCCAGCACATGCCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR CAA 90 bp | AGCGGAGATGACTGGATGAACATACACTTTAATGAGAACGGTTTCCTTAGTAAGGATGTTCTTGTGAATTaGAGGGCTGTGTGCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: SGDDWMNIHFNENGFLSKDVLVN*RAVCLL Trigger: CAGAAGGCACACAGCCCTCAAATTCACAAGAACATC...CTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTTCATCCAGTCATCTCCGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 |
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| CDS-3UTR CAA 90 bp | AACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGAGCTGAAGGATGTTCTTGTGAATTaGAGGGCTGTGTGCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: NIHFNENGFLSKCICELKDVLVN*RAVCLL Trigger: CAGAAGGCACACAGCCCTCAAATTCACAAGAACATC...CTTCAGCTCACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR CAA 90 bp | GACTGGATGAACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTGATGTTCTTGTGAATTaGAGGGCTGTGTGCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: DWMNIHFNENGFLSKCICDVLVN*RAVCLL Trigger: CAGAAGGCACACAGCCCTCAAATTCACAAGAACATC...ACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTTCATCCAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS-3UTR CAA 90 bp | GATGACTGGATGAACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTAGTCCAAGCATCTaGATGGTATCTTTTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: DDWMNIHFNENGFLSKCICSPSI*MVSFSQ Trigger: CTGGGAAAAAGATACCATCAAGATGCTTGGACTACA...GATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTTCATCCAGTCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 |
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| CDS-3UTR CAA 90 bp | GACTGGATGAACATACACTTTAATGAGAACGGTTTCCTTAGTAAGTGCATCTGTTGTAGTCCAAGCATCTaGATGGTATCTTTTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: DWMNIHFNENGFLSKCICCSPSI*MVSFSQ Trigger: CTGGGAAAAAGATACCATCAAGATGCTTGGACTACA...ACAGATGCACTTACTAAGGAAACCGTTCTCATTAAAGTGTATGTTCATCCAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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| CDS CCA 72 bp | AGATTCTGCACCTTTCTTCACAGTCTGCAGTCTGCATaGAGGCCTCGGGAACGCGGAGCGCAGAACCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RFCTFLHSLQSA*RPRERGAQNPS Trigger: GCTGGGGTTCTGCGCTCCGCGTTCCCGAGGCCTCCATGCAGACTGCAGACTGTGAAGAAAGGTGCAGAATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000194857.6 ENSMUST00000195373.2 |
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| CDS GCA 72 bp | GTACCAATGAGAGATTCTGCACCTTTCTTCACAGTCTaGAGTCTGCATGGAGGCCTCGGGAACGCGGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: VPMRDSAPFFTV*SLHGGLGNAER Trigger: GCGCTCCGCGTTCCCGAGGCCTCCATGCAGACTGCAGACTGTGAAGAAAGGTGCAGAATCTCTCATTGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000194857.6 ENSMUST00000195373.2 |
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| CDS CCA 72 bp | TGTGCTGGACATGGTCTCTTCTGTGGGAAGTCCCTGTaGCAGCTTCAGAGGCTGGATGCGTATCAAGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: CAGHGLFCGKSL*QLQRLDAYQVF Trigger: AAACACTTGATACGCATCCAGCCTCTGAAGCTGCCACAGGGACTTCCCACAGAAGAGACCATGTCCAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027256.12 ENSMUST00000193673.6 ENSMUST00000195373.2 |
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