Pregenerated sensors for MRPL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032563Ensembl transcript IDs: ENSMUST00000035177.15, ENSMUST00000131655.4, ENSMUST00000142424.2, ENSMUST00000149243.8, ENSMUST00000190492.7, ENSMUST00000214036.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCCGGGGCAGGGCACGCGGCAGCAGAGGCGCTTCTTTAGAAGCTaGAGAACAGAGCGAGCGAGCGAGCGAGCGAGCGGAGAGAATTCA | + |
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Preference number: 1 (lower is better) Translates to: EPGQGTRQQRRFFRS*RTERASERASGENS Trigger: TGAATTCTCTCCGCTCGCTCGCTCGCTCGCTCGCTCTGTTCTGCAGCTTCTAAAGAAGCGCCTCTGCTGCCGCGTGCCCTGCCCCGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
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| 3UTR TCA 90 bp | CCGTGTGCACAAGTCTCAGCCTGGCCGCCCTTGCCCTTGCTGGTTTaGAAGCCATCCACACTGGCCTCAGGTCCTCTGTCTACACTAGTC | + |
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Preference number: 1 (lower is better) Translates to: PCAQVSAWPPLPLLV*KPSTLASGPLSTLV Trigger: GACTAGTGTAGACAGAGGACCTGAGGCCAGTGTGGATGGCTTTCAAACCAGCAAGGGCAAGGGCGGCCAGGCTGAGACTTGTGCACACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
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| 3UTR TCA 90 bp | CTATTTGTTTCTGCTGGGGCATCAGCGACGGGCTCACCTCAGCTATaGGCCCACTCACACGGCAGATCCTCGGAAGCGCCCAGGCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: LFVSAGASATGSPQL*AHSHGRSSEAPRLY Trigger: GTAAAGCCTGGGCGCTTCCGAGGATCTGCCGTGTGAGTGGGCTCATAGCTGAGGTGAGCCCGTCGCTGATGCCCCAGCAGAAACAAATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
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| 3UTR CCA 90 bp | TCCAACCGTGTGCACAAGTCTCAGCCTGGCCGCCCTTGCCCTTGCTaGTTTGAAAGCCATCCACACTGGCCTCAGGTCCTCTGTCTACAC | + |
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Preference number: 1 (lower is better) Translates to: SNRVHKSQPGRPCPC*FESHPHWPQVLCLH Trigger: GTGTAGACAGAGGACCTGAGGCCAGTGTGGATGGCTTTCAAACCAGCAAGGGCAAGGGCGGCCAGGCTGAGACTTGTGCACACGGTTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
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| 3UTR TCA 90 bp | TGCACGAAGCACAGAGTCCTGCCACACCCGGGCATCAGGCAAAGGTaGTGGAAGGTTCACTGGGCTGCCACACGCTCTCGTCAAACAAAT | + |
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Preference number: 1 (lower is better) Translates to: CTKHRVLPHPGIRQR*WKVHWAATRSRQTN Trigger: ATTTGTTTGACGAGAGCGTGTGGCAGCCCAGTGAACCTTCCATCACCTTTGCCTGATGCCCGGGTGTGGCAGGACTCTGTGCTTCGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
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| 3UTR CCA 90 bp | ACAATGATGCAGTCAGTAGCCTCTGCCCAGCTTTTCCTCCCACACTaGCTTCTGCTGACACGGCTGGCAGTGCCTCCCATTGCAATCAGG | + |
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Preference number: 1 (lower is better) Translates to: TMMQSVASAQLFLPH*LLLTRLAVPPIAIR Trigger: CCTGATTGCAATGGGAGGCACTGCCAGCCGTGTCAGCAGAAGCCAGTGTGGGAGGAAAAGCTGGGCAGAGGCTACTGACTGCATCATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR GCA 90 bp | CCCATTCCTGATCTGGTTCATCAAAGTGCACGAAGCACAGAGTCCTaGCACACCCGGGCATCAGGCAAAGGTGATGGAAGGTTCACTGGG | + |
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Preference number: 1 (lower is better) Translates to: PIPDLVHQSARSTES*HTRASGKGDGRFTG Trigger: CCCAGTGAACCTTCCATCACCTTTGCCTGATGCCCGGGTGTGGCAGGACTCTGTGCTTCGTGCACTTTGATGAACCAGATCAGGAATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
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| 3UTR TCA 90 bp | CTCTTTAGTTCTGACAAGGACAGCAGGTGTTTGGGGAGGCAGGTGTaGCTGAGTGGCATGTCAGTAAGACCCTGGCCTCCACTTCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: LFSSDKDSRCLGRQV*LSGMSVRPWPPLQH Trigger: GTGCTGAAGTGGAGGCCAGGGTCTTACTGACATGCCACTCAGTCACACCTGCCTCCCCAAACACCTGCTGTCCTTGTCAGAACTAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
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| 3UTR GCA 90 bp | CTGAAGCCTTCTTTGCCACAGACTGCTGGACTCCTGGCTCCAGTGTaGAGCGTATTATTTCCAGCGCGGCTTTTGTTGTTTCTGAGACGC | + |
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Preference number: 1 (lower is better) Translates to: LKPSLPQTAGLLAPV*SVLFPARLLLFLRR Trigger: GCGTCTCAGAAACAACAAAAGCCGCGCTGGAAATAATACGCTGCACACTGGAGCCAGGAGTCCAGCAGTCTGTGGCAAAGAAGGCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
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| 3UTR CCA 90 bp | AGATGCCAAGATGAGCAATCGCGGCCGTCCCACACCAGGGCACTGTaGCCAGGTGAGTTCATTTCTTACCTTTTATGGTGGTATGGACTC | + |
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Preference number: 1 (lower is better) Translates to: RCQDEQSRPSHTRAL*PGEFISYLLWWYGL Trigger: GAGTCCATACCACCATAAAAGGTAAGAAATGAACTCACCTGGCCACAGTGCCCTGGTGTGGGACGGCCGCGATTGCTCATCTTGGCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR CCA 90 bp | TCTTTCCCCAAATTTCTGGAAAGACAGATGAGGGACACTGGGCAATaGCTCCCCTCCCTGAAGCCTTCTTTGCCACAGACTGCTGGACTC | + |
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Preference number: 1 (lower is better) Translates to: SFPKFLERQMRDTGQ*LPSLKPSLPQTAGL Trigger: GAGTCCAGCAGTCTGTGGCAAAGAAGGCTTCAGGGAGGGGAGCCATTGCCCAGTGTCCCTCATCTGTCTTTCCAGAAATTTGGGGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
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| 3UTR TCA 90 bp | GTTCCCTTCCCTGTCCAGGGAGAAATGTTCTCAGAGTTCAGGCCATaGCAACTGGTATTATCCAGTAAAGCCAGAGCTATCATGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: VPFPVQGEMFSEFRP*QLVLSSKARAIMET Trigger: TGTCTCCATGATAGCTCTGGCTTTACTGGATAATACCAGTTGTCATGGCCTGAACTCTGAGAACATTTCTCCCTGGACAGGGAAGGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR CCA 90 bp | TCCCTGTCCAGGGAGAAATGTTCTCAGAGTTCAGGCCATGACAACTaGTATTATCCAGTAAAGCCAGAGCTATCATGGAGACAGGCTGAT | + |
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Preference number: 1 (lower is better) Translates to: SLSREKCSQSSGHDN*YYPVKPELSWRQAD Trigger: ATCAGCCTGTCTCCATGATAGCTCTGGCTTTACTGGATAATACCAGTTGTCATGGCCTGAACTCTGAGAACATTTCTCCCTGGACAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR TCA 90 bp | GGAAGGTATAGCATTCGTGCGACCAAGAGATGCTCTCACTGTGACTaGTATTCTTTTTCAAAGAGGAGCTCTTTTGACCACCCAGACTGG | + |
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Preference number: 1 (lower is better) Translates to: GRYSIRATKRCSHCD*YSFSKRSSFDHPDW Trigger: CCAGTCTGGGTGGTCAAAAGAGCTCCTCTTTGAAAAAGAATATCAGTCACAGTGAGAGCATCTCTTGGTCGCACGAATGCTATACCTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR TCA 90 bp | AGTGACTCATTTGTGTCCTTTGATAAAAACAAGAGCATGCTCTCATaGCTAAGCCGCGGGAATGCGATTCCCATTCCTGATCTGGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: SDSFVSFDKNKSMLS*LSRGNAIPIPDLVH Trigger: ATGAACCAGATCAGGAATGGGAATCGCATTCCCGCGGCTTAGTCATGAGAGCATGCTCTTGTTTTTATCAAAGGACACAAATGAGTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035177.15 ENSMUST00000142424.2 |
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| 3UTR GCA 90 bp | AGACATTGTCCGATGCCATTCAACCTAACCTGTGACAGTTGTAAATaGCATTCCCATAGGCTACCCTTCATCTACACCTCAGTACTTAAA | + |
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Preference number: 1 (lower is better) Translates to: RHCPMPFNLTCDSCK*HSHRLPFIYTSVLK Trigger: TTTAAGTACTGAGGTGTAGATGAAGGGTAGCCTATGGGAATGGCATTTACAACTGTCACAGGTTAGGTTGAATGGCATCGGACAATGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR TCA 90 bp | ATGGAGCCACTGAAGGTGCCTGCTTACTTCAGCCTTATAGTATGGTaGCCTACTTTTGTGTCTCCAAATCCTTTCTTAGTTCAGAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: MEPLKVPAYFSLIVW*PTFVSPNPFLVQKF Trigger: AAACTTCTGAACTAAGAAAGGATTTGGAGACACAAAAGTAGGTCACCATACTATAAGGCTGAAGTAAGCAGGCACCTTCAGTGGCTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR CCA 90 bp | GTGACCACTGTCATCTATTGGTCATGGAAGAGGCCTTACAGCAGATaGAAAATTAATGGAAATTCCCCAAAGCAGAAGCAACTAATCTGT | + |
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Preference number: 1 (lower is better) Translates to: VTTVIYWSWKRPYSR*KINGNSPKQKQLIC Trigger: ACAGATTAGTTGCTTCTGCTTTGGGGAATTTCCATTAATTTTCCATCTGCTGTAAGGCCTCTTCCATGACCAATAGATGACAGTGGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR TCA 90 bp | GTACAAATGGCTAATTGGAATGCAGTTTGGTTACAATATGATCCCTaGTTTCAAGAGAAAACAGAAGTGGCATGTCAGGCTCACGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: VQMANWNAVWLQYDP*FQEKTEVACQAHAQ Trigger: TTGAGCGTGAGCCTGACATGCCACTTCTGTTTTCTCTTGAAATCAGGGATCATATTGTAACCAAACTGCATTCCAATTAGCCATTTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR CCA 90 bp | ATATTCGGTATTTTTACCTCCCTCCTCTCCCGACCTCAGATTACCTaGCTTAATTACAGCGTTATCTGTCACATGAAAGATTTTATGTAT | + |
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Preference number: 1 (lower is better) Translates to: IFGIFTSLLSRPQIT*LNYSVICHMKDFMY Trigger: ATACATAAAATCTTTCATGTGACAGATAACGCTGTAATTAAGCCAGGTAATCTGAGGTCGGGAGAGGAGGGAGGTAAAAATACCGAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
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| 3UTR CCA 90 bp | AGAAAGAAACCCACAAGTGTTTACAGAAGCTCTGAGAACATTTTATaGCCTGAAAACTTTCAGATTATGTCTGGATTCACAGCAGATGTC | + |
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Preference number: 1 (lower is better) Translates to: RKKPTSVYRSSENIL*PENFQIMSGFTADV Trigger: GACATCTGCTGTGAATCCAGACATAATCTGAAAGTTTTCAGGCCATAAAATGTTCTCAGAGCTTCTGTAAACACTTGTGGGTTTCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGGGGCATCAGCGACGGGCTCACCTCAGCTATGAGCCCACTCACACGGCATTGGGGAGGCAGGTGTaGCTGAGTGGCATGTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: LLGHQRRAHLSYEPTHTALGRQV*LSGMSV Trigger: TACTGACATGCCACTCAGTCACACCTGCCTCCCCAA...TGCCGTGTGAGTGGGCTCATAGCTGAGGTGAGCCCGTCGCTGATGCCCCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCCAGCTTTTCCTCCCACACTGGCTTCTGCTGACACGGCTGGCAGTGCCTATCATGGAGACAGGCTaGTCCACCTTAGATTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SAQLFLPHWLLLTRLAVPIMETG*STLDSS Trigger: GCTGGAATCTAAGGTGGATCAGCCTGTCTCCATGAT...AGGCACTGCCAGCCGTGTCAGCAGAAGCCAGTGTGGGAGGAAAAGCTGGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCCAGCTTTTCCTCCCACACTGGCTTCTGCTGACACGGCTGGCAGTGCCTAAAGAGGAGCTCTTTTaGCCACCCAGACTGGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: SAQLFLPHWLLLTRLAVPKEELF*PPRLVE Trigger: CTCTACCAGTCTGGGTGGTCAAAAGAGCTCCTCTTT...AGGCACTGCCAGCCGTGTCAGCAGAAGCCAGTGTGGGAGGAAAAGCTGGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR-3UTR TCA 90 bp | CGTCCCACACCAGGGCACTGTGGCCAGGTGAGTTCATTTCTTACCTTTTATGGTCACACTGGCTTCTGCTaGCACGGCTGGCAGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: RPTPGHCGQVSSFLTFYGHTGFC*HGWQCL Trigger: GAGGCACTGCCAGCCGTGTCAGCAGAAGCCAGTGTG...ACCATAAAAGGTAAGAAATGAACTCACCTGGCCACAGTGCCCTGGTGTGGGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCCACACCCGGGCATCAGGCAAAGGTGATGGAAGGTTCACTGGGCTGCCAGCCCACTGTCAGGGCTaGGATTTTTCCATTATGGTC | + |
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Preference number: 2 (lower is better) Translates to: SCHTRASGKGDGRFTGLPAHCQG*DFSIMV Trigger: GACCATAATGGAAAAATCGCAGCCCTGACAGTGGGC...TGGCAGCCCAGTGAACCTTCCATCACCTTTGCCTGATGCCCGGGTGTGGCAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
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| 3UTR-3UTR CCA 90 bp | CACGAAGCACAGAGTCCTGCCACACCCGGGCATCAGGCAAAGGTGATGGAAGGTTTCCAGGCCAGACTCTaGCAATATCCCCAGTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: HEAQSPATPGHQAKVMEGFQARL*QYPQLR Trigger: TCTCAACTGGGGATATTGCCAGAGTCTGGCCTGGAA...ACCTTCCATCACCTTTGCCTGATGCCCGGGTGTGGCAGGACTCTGTGCTTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
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| 3UTR-3UTR GCA 90 bp | CGTCCCACACCAGGGCACTGTGGCCAGGTGAGTTCATTTCTTACCTTTTATGGTAACGTGAATGGCACATaGCAGCTGTCTGGGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: RPTPGHCGQVSSFLTFYGNVNGT*QLSGAA Trigger: GGCTGCCCCAGACAGCTGGCATGTGCCATTCACGTT...ACCATAAAAGGTAAGAAATGAACTCACCTGGCCACAGTGCCCTGGTGTGGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR-3UTR CCA 90 bp | CACGAAGCACAGAGTCCTGCCACACCCGGGCATCAGGCAAAGGTGATGGAAGGTATGTATCTGTTTTGGTaGCAGTCCAAGATCTCGGTA | + |
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Preference number: 2 (lower is better) Translates to: HEAQSPATPGHQAKVMEGMYLFW*QSKISV Trigger: TACCGAGATCTTGGACTGCCACCAAAACAGATACAT...ACCTTCCATCACCTTTGCCTGATGCCCGGGTGTGGCAGGACTCTGTGCTTCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
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| 3UTR-3UTR GCA 90 bp | TATTCGGTATTTTTACCTCCCTCCTCTCCCGACCTCAGATTACCTGGCTTAATTCAGCCTGGCCGCCCTTaGCCTTGCTGGTTTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: YSVFLPPSSPDLRLPGLIQPGRP*PCWFES Trigger: GCTTTCAAACCAGCAAGGGCAAGGGCGGCCAGGCTG...AATTAAGCCAGGTAATCTGAGGTCGGGAGAGGAGGGAGGTAAAAATACCGAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
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| 3UTR-3UTR TCA 90 bp | CGTCCCACACCAGGGCACTGTGGCCAGGTGAGTTCATTTCTTACCTTTTATGGTTGCGATTCCCATTCCTaGTCTGGTTCATCAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: RPTPGHCGQVSSFLTFYGCDSHS*SGSSKC Trigger: GCACTTTGATGAACCAGATCAGGAATGGGAATCGCA...ACCATAAAAGGTAAGAAATGAACTCACCTGGCCACAGTGCCCTGGTGTGGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR-3UTR TCA 90 bp | GTGATGGAAGGTTCACTGGGCTGCCACACGCTCTCGTCAAACAAATCTTCTGGATGCGATTCCCATTCCTaGTCTGGTTCATCAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: VMEGSLGCHTLSSNKSSGCDSHS*SGSSKC Trigger: GCACTTTGATGAACCAGATCAGGAATGGGAATCGCA...TCCAGAAGATTTGTTTGACGAGAGCGTGTGGCAGCCCAGTGAACCTTCCATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGTAAATGCCATTCCCATAGGCTACCCTTCATCTACACCTCAGTACTTAAAGAGCAGAGCCCAGCAGTaGCTGCTCCACAGACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: VVNAIPIGYPSSTPQYLKSRAQQ*LLHRQQ Trigger: CTGCTGTCTGTGGAGCAGCCACTGCTGGGCTCTGCT...CTTTAAGTACTGAGGTGTAGATGAAGGGTAGCCTATGGGAATGGCATTTACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR-3UTR CCA 90 bp | CACGAAGCACAGAGTCCTGCCACACCCGGGCATCAGGCAAAGGTGATGGAAGGTAACGCAAACCTAGACTaGGAAATATGTCTAAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: HEAQSPATPGHQAKVMEGNANLD*EICLKN Trigger: ATTCTTTAGACATATTTCCCAGTCTAGGTTTGCGTT...ACCTTCCATCACCTTTGCCTGATGCCCGGGTGTGGCAGGACTCTGTGCTTCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
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| 3UTR-3UTR CCA 90 bp | CACGAAGCACAGAGTCCTGCCACACCCGGGCATCAGGCAAAGGTGATGGAAGGTCATTATGGTCTTCCTTaGGAGTGTATTTTAACACAT | + |
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Preference number: 2 (lower is better) Translates to: HEAQSPATPGHQAKVMEGHYGLP*ECILTH Trigger: ATGTGTTAAAATACACTCCCAAGGAAGACCATAATG...ACCTTCCATCACCTTTGCCTGATGCCCGGGTGTGGCAGGACTCTGTGCTTCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAAACCACATATTCGGTATTTTTACCTCCCTCCTCTCCCGACCTCAGATTATTGCCCTTGCTGGTTTaGAAGCCATCCACACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: KQTTYSVFLPPSSPDLRLLPLLV*KPSTLA Trigger: GGCCAGTGTGGATGGCTTTCAAACCAGCAAGGGCAA...TAATCTGAGGTCGGGAGAGGAGGGAGGTAAAAATACCGAATATGTGGTTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
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| 3UTR-3UTR GCA 90 bp | CTGTCACATGAAAGATTTTATGTATCTGTTTTGGTGGCAGTCCAAGATCTCGGTGGCCGCCCTTGCCCTTaGTGGTTTGAAAGCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: LSHERFYVSVLVAVQDLGGRPCP*WFESHP Trigger: TGGATGGCTTTCAAACCAGCAAGGGCAAGGGCGGCC...ACCGAGATCTTGGACTGCCACCAAAACAGATACATAAAATCTTTCATGTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGCTTTACCTCAGTCTATCTGGTCTACACGTTAGTCTTATTTCCCTTTTCCGCTTCTTTAGAAGCTaGAGAACAGAGCGAGCGAGC | + |
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Preference number: 2 (lower is better) Translates to: PRLYLSLSGLHVSLISLFRFFRS*RTERAS Trigger: GCTCGCTCGCTCTGTTCTGCAGCTTCTAAAGAAGCG...GAAAAGGGAAATAAGACTAACGTGTAGACCAGATAGACTGAGGTAAAGCCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAGTCTGGTTGTATAGCTCCAGCTGGCCTTGAATTCAAATCCACTACCTTCAGGTGTGTACCATGCTaGCTAATAGCTGGCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: RQSGCIAPAGLEFKSTTFRCVPC*LIAGLS Trigger: GGAAAGGCCAGCTATTAGCCAGCATGGTACACACCT...GAAGGTAGTGGATTTGAATTCAAGGCCAGCTGGAGCTATACAACCAGACTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR-3UTR CCA 90 bp | ACTTTCAGATTATGTCTGGATTCACAGCAGATGTCCCTTAGCAGAGGTGCTGATAGCGGAGAGAATTCATaGAAAGGACCGGGCAACGAG | + |
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Preference number: 2 (lower is better) Translates to: TFRLCLDSQQMSLSRGADSGENS*KGPGNE Trigger: CTCGTTGCCCGGTCCTTTCCATGAATTCTCTCCGCT...ATCAGCACCTCTGCTAAGGGACATCTGCTGTGAATCCAGACATAATCTGAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTTTACCTCAGTCTATCTGGTCTACACGTTAGTCTTATTTCCCTTTTCCCTTTTCTGGAAAGACAGATaGGGGACACTGGGCAATGGC | + |
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Preference number: 2 (lower is better) Translates to: GFTSVYLVYTLVLFPFSLFWKDR*GTLGNG Trigger: GCCATTGCCCAGTGTCCCTCATCTGTCTTTCCAGAA...AAGGGAAAAGGGAAATAAGACTAACGTGTAGACCAGATAGACTGAGGTAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
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| 3UTR-3UTR TCA 90 bp | CGTCCCACACCAGGGCACTGTGGCCAGGTGAGTTCATTTCTTACCTTTTATGGTGAGATGCTCTCACTGTaGCTGATATTCTTTTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: RPTPGHCGQVSSFLTFYGEMLSL*LIFFFK Trigger: TTTGAAAAAGAATATCAGTCACAGTGAGAGCATCTC...ACCATAAAAGGTAAGAAATGAACTCACCTGGCCACAGTGCCCTGGTGTGGGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR-3UTR TCA 90 bp | AACCCACAAGTGTTTACAGAAGCTCTGAGAACATTTTATGGCCTGAAAACTTTCAATGGCTCCCCTCCCTaGAGCCTTCTTTGCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: NPQVFTEALRTFYGLKTFNGSPP*SLLCHR Trigger: TCTGTGGCAAAGAAGGCTTCAGGGAGGGGAGCCATT...GAAAGTTTTCAGGCCATAAAATGTTCTCAGAGCTTCTGTAAACACTTGTGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
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| 3UTR-3UTR CCA 90 bp | CGTCCCACACCAGGGCACTGTGGCCAGGTGAGTTCATTTCTTACCTTTTATGGTAGGCCTTACAGCAGATaGAAAATTAATGGAAATTCC | + |
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Preference number: 2 (lower is better) Translates to: RPTPGHCGQVSSFLTFYGRPYSR*KINGNS Trigger: GGAATTTCCATTAATTTTCCATCTGCTGTAAGGCCT...ACCATAAAAGGTAAGAAATGAACTCACCTGGCCACAGTGCCCTGGTGTGGGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR-3UTR GCA 90 bp | GTTGTAAATGCCATTCCCATAGGCTACCCTTCATCTACACCTCAGTACTTAAAGTCTGGTTCATCAAAGTaGACGAAGCACAGAGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: VVNAIPIGYPSSTPQYLKSGSSK*TKHRVL Trigger: CAGGACTCTGTGCTTCGTGCACTTTGATGAACCAGA...CTTTAAGTACTGAGGTGTAGATGAAGGGTAGCCTATGGGAATGGCATTTACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
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| 3UTR-3UTR CCA 90 bp | TTGCTAACCAGGCTGAAGGGAGGGCTCAGTGACTCATTTGTGTCCTTTGATAAAAACCTGCACCAGTGTTaGTACAAATGGCTAATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LLTRLKGGLSDSFVSFDKNLHQC*YKWLIG Trigger: TCCAATTAGCCATTTGTACCAACACTGGTGCAGGTT...TTTATCAAAGGACACAAATGAGTCACTGAGCCCTCCCTTCAGCCTGGTTAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGAGAAAGAAACCCACAAGTGTTTACAGAAGCTCTGAGAACATTTTATGGCGCAGGTGTGACTGAGTaGCATGTCAGTAAGACCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TRERNPQVFTEALRTFYGAGVTE*HVSKTL Trigger: CAGGGTCTTACTGACATGCCACTCAGTCACACCTGC...GCCATAAAATGTTCTCAGAGCTTCTGTAAACACTTGTGGGTTTCTTTCTCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| 3UTR-3UTR GCA 90 bp | CACATGAAAGATTTTATGTATCTGTTTTGGTGGCAGTCCAAGATCTCGGTAAAAGTTTATCCAACCGTGTaGACAAGTCTCAGCCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: HMKDFMYLFWWQSKISVKVYPTV*TSLSLA Trigger: GGCCAGGCTGAGACTTGTGCACACGGTTGGATAAAC...TTTTACCGAGATCTTGGACTGCCACCAAAACAGATACATAAAATCTTTCATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
||
| 3UTR-3UTR CCA 90 bp | CCTTACAGCAGATGGAAAATTAATGGAAATTCCCCAAAGCAGAAGCAACTAATCGACAGCAGGCTATGCTaGGCTCTGTATCCACTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: PYSRWKINGNSPKQKQLIDSRLC*ALYPLS Trigger: ACTTAGTGGATACAGAGCCCAGCATAGCCTGCTGTC...GATTAGTTGCTTCTGCTTTGGGGAATTTCCATTAATTTTCCATCTGCTGTAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CCA 90 bp | CCTTACAGCAGATGGAAAATTAATGGAAATTCCCCAAAGCAGAAGCAACTAATCAAGAGAAAACAGAAGTaGCATGTCAGGCTCACGCTC | + |
|
Preference number: 2 (lower is better) Translates to: PYSRWKINGNSPKQKQLIKRKQK*HVRLTL Trigger: GAGCGTGAGCCTGACATGCCACTTCTGTTTTCTCTT...GATTAGTTGCTTCTGCTTTGGGGAATTTCCATTAATTTTCCATCTGCTGTAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR GCA 90 bp | TATCTGTCACATGAAAGATTTTATGTATCTGTTTTGGTGGCAGTCCAAGATCTCTCTGGTTCATCAAAGTaGACGAAGCACAGAGTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: YLSHERFYVSVLVAVQDLSGSSK*TKHRVL Trigger: CAGGACTCTGTGCTTCGTGCACTTTGATGAACCAGA...GAGATCTTGGACTGCCACCAAAACAGATACATAAAATCTTTCATGTGACAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
||
| 3UTR-3UTR GCA 90 bp | AGACAGTCTGGTTGTATAGCTCCAGCTGGCCTTGAATTCAAATCCACTACCTTCAACAAACTCAGTCTATaGGACTGTTTGTTTAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: RQSGCIAPAGLEFKSTTFNKLSL*DCLFNA Trigger: TGCATTAAACAAACAGTCGCATAGACTGAGTTTGTT...GAAGGTAGTGGATTTGAATTCAAGGCCAGCTGGAGCTATACAACCAGACTGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR GCA 90 bp | TATAGTCAGAACAGAACTGATGGATCCTCTTTCTCCTTAAAACAACAAACCGTCTGTGACAGTTGTAAATaGCATTCCCATAGGCTACCC | + |
|
Preference number: 2 (lower is better) Translates to: YSQNRTDGSSFSLKQQTVCDSCK*HSHRLP Trigger: GGGTAGCCTATGGGAATGGCATTTACAACTGTCACA...GACGGTTTGTTGTTTTAAGGAGAAAGAGGATCCATCAGTTCTGTTCTGACTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR GCA 90 bp | TATAGTCAGAACAGAACTGATGGATCCTCTTTCTCCTTAAAACAACAAACCGTCATTCTCTTCTTCAGATaGCAAGATGAGCAATCGCGG | + |
|
Preference number: 2 (lower is better) Translates to: YSQNRTDGSSFSLKQQTVILFFR*QDEQSR Trigger: CCGCGATTGCTCATCTTGGCATCTGAAGAAGAGAAT...GACGGTTTGTTGTTTTAAGGAGAAAGAGGATCCATCAGTTCTGTTCTGACTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR CAA 90 bp | TCTTCACAAATTGTTAATTTTAACAAACTCAGTCTATGCGACTGTTaGTTTAATGCAGTAACCTTGCTAACCAGGCTGAAGGGAGGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SSQIVNFNKLSLCDC*FNAVTLLTRLKGGL Trigger: GAGCCCTCCCTTCAGCCTGGTTAGCAAGGTTACTGCATTAAACAAACAGTCGCATAGACTGAGTTTGTTAAAATTAACAATTTGTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035177.15 ENSMUST00000142424.2 |
||
| 3UTR-3UTR TCA 90 bp | TATAGTCAGAACAGAACTGATGGATCCTCTTTCTCCTTAAAACAACAAACCGTCAGCCTTATAGTATGGTaGCCTACTTTTGTGTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: YSQNRTDGSSFSLKQQTVSLIVW*PTFVSP Trigger: TGGAGACACAAAAGTAGGTCACCATACTATAAGGCT...GACGGTTTGTTGTTTTAAGGAGAAAGAGGATCCATCAGTTCTGTTCTGACTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CCA 90 bp | GACAGTTGTAAATGCCATTCCCATAGGCTACCCTTCATCTACACCTCAGTACTTGTACAAATGGCTAATTaGAATGCAGTTTGGTTACAA | + |
|
Preference number: 2 (lower is better) Translates to: DSCKCHSHRLPFIYTSVLVQMAN*NAVWLQ Trigger: TTGTAACCAAACTGCATTCCAATTAGCCATTTGTAC...AAGTACTGAGGTGTAGATGAAGGGTAGCCTATGGGAATGGCATTTACAACTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CCA 90 bp | TATAGTCAGAACAGAACTGATGGATCCTCTTTCTCCTTAAAACAACAAACCGTCGTACCCTTGACCGGTTaGTTCCCCTTATGTTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: YSQNRTDGSSFSLKQQTVVPLTG*FPLCFI Trigger: AATAAAACATAAGGGGAACCAACCGGTCAAGGGTAC...GACGGTTTGTTGTTTTAAGGAGAAAGAGGATCCATCAGTTCTGTTCTGACTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CCA 90 bp | CACATGAAAGATTTTATGTATCTGTTTTGGTGGCAGTCCAAGATCTCGGTAAAAATGTATCTGTTTTGGTaGCAGTCCAAGATCTCGGTA | + |
|
Preference number: 2 (lower is better) Translates to: HMKDFMYLFWWQSKISVKMYLFW*QSKISV Trigger: TACCGAGATCTTGGACTGCCACCAAAACAGATACAT...TTTTACCGAGATCTTGGACTGCCACCAAAACAGATACATAAAATCTTTCATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000131655.4 ENSMUST00000142424.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATGGTTTCTTTTATCCAACAGGCAGCAATGTAGTTCCTCCAGGTTCTGTTTCAACGCAAACCTAGACTaGGAAATATGTCTAAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: KWFLLSNRQQCSSSRFCFNANLD*EICLKN Trigger: ATTCTTTAGACATATTTCCCAGTCTAGGTTTGCGTT...GAAACAGAACCTGGAGGAACTACATTGCTGCCTGTTGGATAAAAGAAACCATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CCA 90 bp | CCTTACAGCAGATGGAAAATTAATGGAAATTCCCCAAAGCAGAAGCAACTAATCCAGTGTTGGTACAAATaGCTAATTGGAATGCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PYSRWKINGNSPKQKQLIQCWYK*LIGMQF Trigger: AAACTGCATTCCAATTAGCCATTTGTACCAACACTG...GATTAGTTGCTTCTGCTTTGGGGAATTTCCATTAATTTTCCATCTGCTGTAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR TCA 72 bp | TCTGCTGGGGCATCAGCGACGGGCTCACCTCAGCTATaGGCCCACTCACACGGCAGATCCTCGGAAGCGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SAGASATGSPQL*AHSHGRSSEAP Trigger: GGGCGCTTCCGAGGATCTGCCGTGTGAGTGGGCTCATAGCTGAGGTGAGCCCGTCGCTGATGCCCCAGCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| 3UTR GCA 72 bp | CAGGGCACGCGGCAGCAGAGGCGCTTCTTTAGAAGCTaGAGAACAGAGCGAGCGAGCGAGCGAGCGAGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: QGTRQQRRFFRS*RTERASERASG Trigger: TCCGCTCGCTCGCTCGCTCGCTCGCTCTGTTCTGCAGCTTCTAAAGAAGCGCCTCTGCTGCCGCGTGCCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| 3UTR TCA 72 bp | CACAGAGTCCTGCCACACCCGGGCATCAGGCAAAGGTaGTGGAAGGTTCACTGGGCTGCCACACGCTCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: HRVLPHPGIRQR*WKVHWAATRSR Trigger: ACGAGAGCGTGTGGCAGCCCAGTGAACCTTCCATCACCTTTGCCTGATGCCCGGGTGTGGCAGGACTCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
||
| 3UTR GCA 72 bp | CGTGTGCACAAGTCTCAGCCTGGCCGCCCTTGCCCTTaGTGGTTTGAAAGCCATCCACACTGGCCTCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RVHKSQPGRPCP*WFESHPHWPQV Trigger: GACCTGAGGCCAGTGTGGATGGCTTTCAAACCAGCAAGGGCAAGGGCGGCCAGGCTGAGACTTGTGCACACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
||
| 3UTR TCA 72 bp | CCTCTGCCCAGCTTTTCCTCCCACACTGGCTTCTGCTaGCACGGCTGGCAGTGCCTCCCATTGCAATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PLPSFSSHTGFC*HGWQCLPLQSG Trigger: TCCTGATTGCAATGGGAGGCACTGCCAGCCGTGTCAGCAGAAGCCAGTGTGGGAGGAAAAGCTGGGCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR CCA 72 bp | CAGTCAGTAGCCTCTGCCCAGCTTTTCCTCCCACACTaGCTTCTGCTGACACGGCTGGCAGTGCCTCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: QSVASAQLFLPH*LLLTRLAVPPI Trigger: AATGGGAGGCACTGCCAGCCGTGTCAGCAGAAGCCAGTGTGGGAGGAAAAGCTGGGCAGAGGCTACTGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR CCA 72 bp | GAGCGAGCGAGCGAGCGAGCGAGCGGAGAGAATTCATaGAAAGGACCGGGCAACGAGGAGGAGAATTGTACG | + |
|
Preference number: 3 (lower is better) Translates to: ERASERASGENS*KGPGNEEENCT Trigger: CGTACAATTCTCCTCCTCGTTGCCCGGTCCTTTCCATGAATTCTCTCCGCTCGCTCGCTCGCTCGCTCGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| 3UTR CCA 72 bp | GGACAGCAGGTGTTTGGGGAGGCAGGTGTGACTGAGTaGCATGTCAGTAAGACCCTGGCCTCCACTTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GQQVFGEAGVTE*HVSKTLASTSA Trigger: TGCTGAAGTGGAGGCCAGGGTCTTACTGACATGCCACTCAGTCACACCTGCCTCCCCAAACACCTGCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| 3UTR TCA 72 bp | CTTCAGGGAATCCTAGGCAGCTGTGGAGATAGAACGTaGATGGCACATGCCAGCTGTCTGGGGCAGCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: LQGILGSCGDRT*MAHASCLGQPT Trigger: TGTGGGCTGCCCCAGACAGCTGGCATGTGCCATTCACGTTCTATCTCCACAGCTGCCTAGGATTCCCTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR TCA 72 bp | GAATGGCACATGCCAGCTGTCTGGGGCAGCCCACACTaGGTGACCACTGTCATCTATTGGTCATGGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EWHMPAVWGSPH*VTTVIYWSWKR Trigger: CCTCTTCCATGACCAATAGATGACAGTGGTCACTCAGTGTGGGCTGCCCCAGACAGCTGGCATGTGCCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR TCA 72 bp | GCAGCGTATTATTTCCAGCGCGGCTTTTGTTGTTTCTaGGACGCTCCTACAAAGAGAGCCGGGGCAGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AAYYFQRGFCCF*DAPTKRAGAGH Trigger: GTGCCCTGCCCCGGCTCTCTTTGTAGGAGCGTCTCAGAAACAACAAAAGCCGCGCTGGAAATAATACGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| 3UTR GCA 72 bp | CTGGCTTCTGCTGACACGGCTGGCAGTGCCTCCCATTaGAATCAGGAAGGTATAGCATTCGTGCGACCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LASADTAGSASH*NQEGIAFVRPR Trigger: TCTTGGTCGCACGAATGCTATACCTTCCTGATTGCAATGGGAGGCACTGCCAGCCGTGTCAGCAGAAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR GCA 72 bp | GATCTGGTTCATCAAAGTGCACGAAGCACAGAGTCCTaGCACACCCGGGCATCAGGCAAAGGTGATGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DLVHQSARSTES*HTRASGKGDGR Trigger: CCTTCCATCACCTTTGCCTGATGCCCGGGTGTGGCAGGACTCTGTGCTTCGTGCACTTTGATGAACCAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
||
| 3UTR GCA 72 bp | ATGGCTCCCCTCCCTGAAGCCTTCTTTGCCACAGACTaGTGGACTCCTGGCTCCAGTGTGCAGCGTATTATT | + |
|
Preference number: 3 (lower is better) Translates to: MAPLPEAFFATD*WTPGSSVQRII Trigger: AATAATACGCTGCACACTGGAGCCAGGAGTCCAGCAGTCTGTGGCAAAGAAGGCTTCAGGGAGGGGAGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| 3UTR-3UTR CAA 90 bp | CACGAAGCACAGAGTCCTGCCACACCCGGGCATCAGGCAAAGGTGATGGAAGGTTTCTTGCAGGAATCCTaGTATGCAGGCAGTGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HEAQSPATPGHQAKVMEGFLQES*YAGSVE Trigger: CTCTACACTGCCTGCATACAAGGATTCCTGCAAGAA...ACCTTCCATCACCTTTGCCTGATGCCCGGGTGTGGCAGGACTCTGTGCTTCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCAAAGTGCACGAAGCACAGAGTCCTGCCACACCCGGGCATCAGGCAAAGGTGGGAAAGGCAGGTTCTaGCAGGAATCCTTGTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: HQSARSTESCHTRASGKGGKGRF*QESLYA Trigger: TGCATACAAGGATTCCTGCAAGAACCTGCCTTTCCC...ACCTTTGCCTGATGCCCGGGTGTGGCAGGACTCTGTGCTTCGTGCACTTTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
||
| 3UTR TCA 72 bp | ATCGCGGCCGTCCCACACCAGGGCACTGTGGCCAGGTaGGTTCATTTCTTACCTTTTATGGTGGTATGGACT | + |
|
Preference number: 3 (lower is better) Translates to: IAAVPHQGTVAR*VHFLPFMVVWT Trigger: AGTCCATACCACCATAAAAGGTAAGAAATGAACTCACCTGGCCACAGTGCCCTGGTGTGGGACGGCCGCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR GCA 72 bp | GAGCCCAGCAGTGGCTGCTCCACAGACAGCAGGCTATaGTGGGCTCTGTATCCACTAAGTCCTCATTTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: EPSSGCSTDSRL*WALYPLSPHFN Trigger: GTTAAAATGAGGACTTAGTGGATACAGAGCCCAGCATAGCCTGCTGTCTGTGGAGCAGCCACTGCTGGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR CCA 72 bp | CCCAGCAGTGGCTGCTCCACAGACAGCAGGCTATGCTaGGCTCTGTATCCACTAAGTCCTCATTTTAACACG | + |
|
Preference number: 3 (lower is better) Translates to: PSSGCSTDSRLC*ALYPLSPHFNT Trigger: CGTGTTAAAATGAGGACTTAGTGGATACAGAGCCCAGCATAGCCTGCTGTCTGTGGAGCAGCCACTGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR GCA 72 bp | CTCAGCTTCTCTAGGGCTGGGATAAGGTGTGTACCATaGTGGCTAATAGCTGGCCTTTCCGAGGCTTACACA | + |
|
Preference number: 3 (lower is better) Translates to: LSFSRAGIRCVP*WLIAGLSEAYT Trigger: TGTGTAAGCCTCGGAAAGGCCAGCTATTAGCCAGCATGGTACACACCTTATCCCAGCCCTAGAGAAGCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR GCA 72 bp | GGGCATCAGGCAAAGGTGATGGAAGGTTCACTGGGCTaGCACACGCTCTCGTCAAACAAATCTTCTGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GHQAKVMEGSLG*HTLSSNKSSGS Trigger: ACTTCCAGAAGATTTGTTTGACGAGAGCGTGTGGCAGCCCAGTGAACCTTCCATCACCTTTGCCTGATGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCCAGCTTTTCCTCCCACACTGGCTTCTGCTGACACGGCTGGCAGTGCCTGGCTCAGTGACTCATTaGTGTCCTTTGATAAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SAQLFLPHWLLLTRLAVPGSVTH*CPLIKT Trigger: TGTTTTTATCAAAGGACACAAATGAGTCACTGAGCC...AGGCACTGCCAGCCGTGTCAGCAGAAGCCAGTGTGGGAGGAAAAGCTGGGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCCAGCTTTTCCTCCCACACTGGCTTCTGCTGACACGGCTGGCAGTGCCTACTCATTTGTGTCCTTaGATAAAAACAAGAGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: SAQLFLPHWLLLTRLAVPTHLCP*IKTRAC Trigger: GCATGCTCTTGTTTTTATCAAAGGACACAAATGAGT...AGGCACTGCCAGCCGTGTCAGCAGAAGCCAGTGTGGGAGGAAAAGCTGGGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CAA 90 bp | CATCAAAGTGCACGAAGCACAGAGTCCTGCCACACCCGGGCATCAGGCAAAGGTCCTTTACCAATAGTTTaGGCTGTGACATCCACATAC | + |
|
Preference number: 3 (lower is better) Translates to: HQSARSTESCHTRASGKGPLPIV*AVTSTY Trigger: GTATGTGGATGTCACAGCCAAAACTATTGGTAAAGG...ACCTTTGCCTGATGCCCGGGTGTGGCAGGACTCTGTGCTTCGTGCACTTTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
||
| 3UTR TCA 72 bp | AACTGTCAATTTCATTCTCTTCTTCAGATGCCAAGATaGGCAATCGCGGCCGTCCCACACCAGGGCACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: NCQFHSLLQMPR*AIAAVPHQGTV Trigger: CACAGTGCCCTGGTGTGGGACGGCCGCGATTGCTCATCTTGGCATCTGAAGAAGAGAATGAAATTGACAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR GCA 72 bp | TCTTTGCCACAGACTGCTGGACTCCTGGCTCCAGTGTaGAGCGTATTATTTCCAGCGCGGCTTTTGTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLPQTAGLLAPV*SVLFPARLLLF Trigger: AAACAACAAAAGCCGCGCTGGAAATAATACGCTGCACACTGGAGCCAGGAGTCCAGCAGTCTGTGGCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| 3UTR CCA 72 bp | GGCTGGGATAAGGTGTGTACCATGCTGGCTAATAGCTaGCCTTTCCGAGGCTTACACAATTACTCAAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GWDKVCTMLANS*PFRGLHNYSRL Trigger: GAGCCTTGAGTAATTGTGTAAGCCTCGGAAAGGCCAGCTATTAGCCAGCATGGTACACACCTTATCCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR GCA 72 bp | AAGACCACAACTGTCAATTTCATTCTCTTCTTCAGATaGCAAGATGAGCAATCGCGGCCGTCCCACACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KTTTVNFILFFR*QDEQSRPSHTR Trigger: CCTGGTGTGGGACGGCCGCGATTGCTCATCTTGGCATCTGAAGAAGAGAATGAAATTGACAGTTGTGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR CCA 72 bp | AGCTTCTCTAGGGCTGGGATAAGGTGTGTACCATGCTaGCTAATAGCTGGCCTTTCCGAGGCTTACACAATT | + |
|
Preference number: 3 (lower is better) Translates to: SFSRAGIRCVPC*LIAGLSEAYTI Trigger: AATTGTGTAAGCCTCGGAAAGGCCAGCTATTAGCCAGCATGGTACACACCTTATCCCAGCCCTAGAGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTGAAAACTTTCAGATTATGTCTGGATTCACAGCAGATGTCCCTTAGCAGACCAGCGCGGCTTTTGTaGTTTCTGAGACGCTCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GLKTFRLCLDSQQMSLSRPARLL*FLRRSY Trigger: GTAGGAGCGTCTCAGAAACAACAAAAGCCGCGCTGG...TCTGCTAAGGGACATCTGCTGTGAATCCAGACATAATCTGAAAGTTTTCAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTTACCTCAGTCTATCTGGTCTACACGTTAGTCTTATTTCCCTTTTCCCTTTCCCTGAAGCCTTCTTaGCCACAGACTGCTGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: GFTSVYLVYTLVLFPFSLSLKPS*PQTAGL Trigger: GAGTCCAGCAGTCTGTGGCAAAGAAGGCTTCAGGGA...AAGGGAAAAGGGAAATAAGACTAACGTGTAGACCAGATAGACTGAGGTAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGATGGAAGGTTCACTGGGCTGCCACACGCTCTCGTCAAACAAATCTTCTGGACCATTATGGTCTTCCTaGGGAGTGTATTTTAACACA | + |
|
Preference number: 3 (lower is better) Translates to: VMEGSLGCHTLSSNKSSGPLWSS*GVYFNT Trigger: TGTGTTAAAATACACTCCCAAGGAAGACCATAATGG...TCCAGAAGATTTGTTTGACGAGAGCGTGTGGCAGCCCAGTGAACCTTCCATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
||
| 3UTR TCA 72 bp | CCTGTCCAGGGAGAAATGTTCTCAGAGTTCAGGCCATaGCAACTGGTATTATCCAGTAAAGCCAGAGCTATC | + |
|
Preference number: 3 (lower is better) Translates to: PVQGEMFSEFRP*QLVLSSKARAI Trigger: GATAGCTCTGGCTTTACTGGATAATACCAGTTGTCATGGCCTGAACTCTGAGAACATTTCTCCCTGGACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR GCA 72 bp | CCGATGCCATTCAACCTAACCTGTGACAGTTGTAAATaGCATTCCCATAGGCTACCCTTCATCTACACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PMPFNLTCDSCK*HSHRLPFIYTS Trigger: TGAGGTGTAGATGAAGGGTAGCCTATGGGAATGGCATTTACAACTGTCACAGGTTAGGTTGAATGGCATCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CAA 90 bp | AGACAGTCTGGTTGTATAGCTCCAGCTGGCCTTGAATTCAAATCCACTACCTTCTTTAATGCAGTAACCTaGCTAACCAGGCTGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RQSGCIAPAGLEFKSTTFFNAVT*LTRLKG Trigger: TCCCTTCAGCCTGGTTAGCAAGGTTACTGCATTAAA...GAAGGTAGTGGATTTGAATTCAAGGCCAGCTGGAGCTATACAACCAGACTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR CCA 72 bp | TACAATATGATCCCTGATTTCAAGAGAAAACAGAAGTaGCATGTCAGGCTCACGCTCAAGTCAGGAGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: YNMIPDFKRKQK*HVRLTLKSGAK Trigger: CTTGGCTCCTGACTTGAGCGTGAGCCTGACATGCCACTTCTGTTTTCTCTTGAAATCAGGGATCATATTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CAA 90 bp | GACAGTTGTAAATGCCATTCCCATAGGCTACCCTTCATCTACACCTCAGTACTTAGTACCCTTGACCGGTaGGTTCCCCTTATGTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: DSCKCHSHRLPFIYTSVLSTLDR*VPLMFY Trigger: ATAAAACATAAGGGGAACCAACCGGTCAAGGGTACT...AAGTACTGAGGTGTAGATGAAGGGTAGCCTATGGGAATGGCATTTACAACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR CCA 72 bp | AACACATCTAATGTAGTAAGTATACAGCTCACACTGTaGTCTCTATTTGTTTCTGCTGGGGCATCAGCGACG | + |
|
Preference number: 3 (lower is better) Translates to: NTSNVVSIQLTL*SLFVSAGASAT Trigger: CGTCGCTGATGCCCCAGCAGAAACAAATAGAGACCACAGTGTGAGCTGTATACTTACTACATTAGATGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| 3UTR CCA 72 bp | ATTTTTACCTCCCTCCTCTCCCGACCTCAGATTACCTaGCTTAATTACAGCGTTATCTGTCACATGAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: IFTSLLSRPQIT*LNYSVICHMKD Trigger: ATCTTTCATGTGACAGATAACGCTGTAATTAAGCCAGGTAATCTGAGGTCGGGAGAGGAGGGAGGTAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
||
| 3UTR TCA 72 bp | CTGAAGGTGCCTGCTTACTTCAGCCTTATAGTATGGTaGCCTACTTTTGTGTCTCCAAATCCTTTCTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LKVPAYFSLIVW*PTFVSPNPFLV Trigger: AACTAAGAAAGGATTTGGAGACACAAAAGTAGGTCACCATACTATAAGGCTGAAGTAAGCAGGCACCTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR CCA 72 bp | GTCATCTATTGGTCATGGAAGAGGCCTTACAGCAGATaGAAAATTAATGGAAATTCCCCAAAGCAGAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VIYWSWKRPYSR*KINGNSPKQKQ Trigger: TTGCTTCTGCTTTGGGGAATTTCCATTAATTTTCCATCTGCTGTAAGGCCTCTTCCATGACCAATAGATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CAA 90 bp | AAATGGTTTCTTTTATCCAACAGGCAGCAATGTAGTTCCTCCAGGTTCTGTTTCAGTCTATGCGACTGTTaGTTTAATGCAGTAACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KWFLLSNRQQCSSSRFCFSLCDC*FNAVTL Trigger: CAAGGTTACTGCATTAAACAAACAGTCGCATAGACT...GAAACAGAACCTGGAGGAACTACATTGCTGCCTGTTGGATAAAAGAAACCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGTCACATGAAAGATTTTATGTATCTGTTTTGGTGGCAGTCCAAGATCTCGGGCTCAGTGACTCATTaGTGTCCTTTGATAAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: ICHMKDFMYLFWWQSKISGSVTH*CPLIKT Trigger: TGTTTTTATCAAAGGACACAAATGAGTCACTGAGCC...CGAGATCTTGGACTGCCACCAAAACAGATACATAAAATCTTTCATGTGACAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGTCACATGAAAGATTTTATGTATCTGTTTTGGTGGCAGTCCAAGATCTCGAGTCTATGCGACTGTTaGTTTAATGCAGTAACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ICHMKDFMYLFWWQSKISSLCDC*FNAVTL Trigger: CAAGGTTACTGCATTAAACAAACAGTCGCATAGACT...CGAGATCTTGGACTGCCACCAAAACAGATACATAAAATCTTTCATGTGACAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
||
| 3UTR CCA 72 bp | ATAGTTAGTCTAACTAAGCTAGTACCCTTGACCGGTTaGTTCCCCTTATGTTTTATTATTAGACAGTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: IVSLTKLVPLTG*FPLCFIIRQSG Trigger: ACCAGACTGTCTAATAATAAAACATAAGGGGAACCAACCGGTCAAGGGTACTAGCTTAGTTAGACTAACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR CCA 72 bp | CCCACAAGTGTTTACAGAAGCTCTGAGAACATTTTATaGCCTGAAAACTTTCAGATTATGTCTGGATTCACA | + |
|
Preference number: 3 (lower is better) Translates to: PTSVYRSSENIL*PENFQIMSGFT Trigger: TGTGAATCCAGACATAATCTGAAAGTTTTCAGGCCATAAAATGTTCTCAGAGCTTCTGTAAACACTTGTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGTCACATGAAAGATTTTATGTATCTGTTTTGGTGGCAGTCCAAGATCTCGACTCATTTGTGTCCTTaGATAAAAACAAGAGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: ICHMKDFMYLFWWQSKISTHLCP*IKTRAC Trigger: GCATGCTCTTGTTTTTATCAAAGGACACAAATGAGT...CGAGATCTTGGACTGCCACCAAAACAGATACATAAAATCTTTCATGTGACAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
||
| 3UTR CCA 72 bp | TTTACAGTTAATAACCTGCACCAGTGTTGGTACAAATaGCTAATTGGAATGCAGTTTGGTTACAATATGATC | + |
|
Preference number: 3 (lower is better) Translates to: FTVNNLHQCWYK*LIGMQFGYNMI Trigger: GATCATATTGTAACCAAACTGCATTCCAATTAGCCATTTGTACCAACACTGGTGCAGGTTATTAACTGTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| 3UTR CAA 72 bp | GACACTGGGCAATGGCTCCCCTCCCTGAAGCCTTCTTaGCCACAGACTGCTGGACTCCTGGCTCCAGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DTGQWLPSLKPS*PQTAGLLAPVC Trigger: GCACACTGGAGCCAGGAGTCCAGCAGTCTGTGGCAAAGAAGGCTTCAGGGAGGGGAGCCATTGCCCAGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTAACCAGGCTGAAGGGAGGGCTCAGTGACTCATTTGTGTCCTTTGATAAAACCCGGGCGCCAGCCTaGGCCAGCAGCCTCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LLTRLKGGLSDSFVSFDKTRAPA*ASSLQP Trigger: GGGTTGGAGGCTGCTGGCGCAGGCTGGCGCCCGGGT...TTTATCAAAGGACACAAATGAGTCACTGAGCCCTCCCTTCAGCCTGGTTAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035177.15 ENSMUST00000142424.2 |
||
| CDS-3UTR GCA 90 bp | AAACCACATATTCGGTATTTTTACCTCCCTCCTCTCCCGACCTCAGATTACCTGACCCGGGCGCCAGCCTaGGCCAGCAGCCTCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: KPHIRYFYLPPLPTSDYLTRAPA*ASSLQP Trigger: GGGTTGGAGGCTGCTGGCGCAGGCTGGCGCCCGGGT...CAGGTAATCTGAGGTCGGGAGAGGAGGGAGGTAAAAATACCGAATATGTGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
||
| CDS-3UTR GCA 90 bp | ACTTTCAGATTATGTCTGGATTCACAGCAGATGTCCCTTAGCAGAGGTGCTGATACCCGGGCGCCAGCCTaGGCCAGCAGCCTCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: TFRLCLDSQQMSLSRGADTRAPA*ASSLQP Trigger: GGGTTGGAGGCTGCTGGCGCAGGCTGGCGCCCGGGT...ATCAGCACCTCTGCTAAGGGACATCTGCTGTGAATCCAGACATAATCTGAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGTCACATGAAAGATTTTATGTATCTGTTTTGGTGGCAGTCCAAGATCTCGACCCGGGCGCCAGCCTaGGCCAGCAGCCTCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: ICHMKDFMYLFWWQSKISTRAPA*ASSLQP Trigger: GGGTTGGAGGCTGCTGGCGCAGGCTGGCGCCCGGGT...CGAGATCTTGGACTGCCACCAAAACAGATACATAAAATCTTTCATGTGACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131655.4 ENSMUST00000142424.2 |
||
| 3UTR CAA 72 bp | CTGGGGCAGCCCACACTGAGTGACCACTGTCATCTATaGGTCATGGAAGAGGCCTTACAGCAGATGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGQPTLSDHCHL*VMEEALQQMEN Trigger: ATTTTCCATCTGCTGTAAGGCCTCTTCCATGACCAATAGATGACAGTGGTCACTCAGTGTGGGCTGCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCAGCTTTTCCTCCCACACTGGCTTCTGCTGACACGGCTGGCAGTGCCTCATTATGGTCTTCCTTaGGAGTGTATTTTAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: SAQLFLPHWLLLTRLAVPHYGLP*ECILTH Trigger: ATGTGTTAAAATACACTCCCAAGGAAGACCATAATG...AGGCACTGCCAGCCGTGTCAGCAGAAGCCAGTGTGGGAGGAAAAGCTGGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR CCA 90 bp | GTGACTGAGTGGCATGTCAGTAAGACCCTGGCCTCCACTTCAGCACTTCTTATTTTCCAGGCCAGACTCTaGCAATATCCCCAGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTEWHVSKTLASTSALLIFQARL*QYPQLR Trigger: TCTCAACTGGGGATATTGCCAGAGTCTGGCCTGGAA...AATAAGAAGTGCTGAAGTGGAGGCCAGGGTCTTACTGACATGCCACTCAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| CDS-3UTR CCA 90 bp | CACTGGGCAATGGCTCCCCTCCCTGAAGCCTTCTTTGCCACAGACTGCTGGACTCATTATGGTCTTCCTTaGGAGTGTATTTTAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: HWAMAPLPEAFFATDCWTHYGLP*ECILTH Trigger: ATGTGTTAAAATACACTCCCAAGGAAGACCATAATG...AGTCCAGCAGTCTGTGGCAAAGAAGGCTTCAGGGAGGGGAGCCATTGCCCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGGGAACCATCACATTCCGTTTTCTCCAATGCCCAACCTTAGGCTCAGCATGTATCTGTTTTGGTaGCAGTCCAAGATCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CPGNHHIPFSPMPNLRLSMYLFW*QSKISV Trigger: TACCGAGATCTTGGACTGCCACCAAAACAGATACAT...GCTGAGCCTAAGGTTGGGCATTGGAGAAAACGGAATGTGATGGTTCCCTGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| CDS-3UTR GCA 90 bp | AAACCACATATTCGGTATTTTTACCTCCCTCCTCTCCCGACCTCAGATTACCTGGCCCACTGTCAGGGCTaGGATTTTTCCATTATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KPHIRYFYLPPLPTSDYLAHCQG*DFSIMV Trigger: GACCATAATGGAAAAATCGCAGCCCTGACAGTGGGC...CAGGTAATCTGAGGTCGGGAGAGGAGGGAGGTAAAAATACCGAATATGTGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTAACCAGGCTGAAGGGAGGGCTCAGTGACTCATTTGTGTCCTTTGATAAACATCAGGAAAGTAGGTaGGGAAAGGCAGGTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLTRLKGGLSDSFVSFDKHQESR*GKAGSC Trigger: GCAAGAACCTGCCTTTCCCCACCTACTTTCCTGATG...TTTATCAAAGGACACAAATGAGTCACTGAGCCCTCCCTTCAGCCTGGTTAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR GCA 90 bp | ACTTTCAGATTATGTCTGGATTCACAGCAGATGTCCCTTAGCAGAGGTGCTGATGCCCACTGTCAGGGCTaGGATTTTTCCATTATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TFRLCLDSQQMSLSRGADAHCQG*DFSIMV Trigger: GACCATAATGGAAAAATCGCAGCCCTGACAGTGGGC...ATCAGCACCTCTGCTAAGGGACATCTGCTGTGAATCCAGACATAATCTGAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| CDS-3UTR CCA 90 bp | CGAGGCTTACACAATTACTCAAGGCTCAGTACTAGCCCCATTTTACAGTTAATATTCCAGGCCAGACTCTaGCAATATCCCCAGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGLHNYSRLSTSPILQLIFQARL*QYPQLR Trigger: TCTCAACTGGGGATATTGCCAGAGTCTGGCCTGGAA...TATTAACTGTAAAATGGGGCTAGTACTGAGCCTTGAGTAATTGTGTAAGCCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR GCA 90 bp | TATAGTCAGAACAGAACTGATGGATCCTCTTTCTCCTTAAAACAACAAACCGTCGCCCACTGTCAGGGCTaGGATTTTTCCATTATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YSQNRTDGSSFSLKQQTVAHCQG*DFSIMV Trigger: GACCATAATGGAAAAATCGCAGCCCTGACAGTGGGC...GACGGTTTGTTGTTTTAAGGAGAAAGAGGATCCATCAGTTCTGTTCTGACTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR CCA 90 bp | AGCGTATTATTTCCAGCGCGGCTTTTGTTGTTTCTGAGACGCTCCTACAAAGAGGTACTACTCTTGCTGTaGAGATTTCTAACAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLFPARLLLFLRRSYKEVLLLL*RFLTKN Trigger: GTTCTTTGTTAGAAATCTCCACAGCAAGAGTAGTAC...CTCTTTGTAGGAGCGTCTCAGAAACAACAAAAGCCGCGCTGGAAATAATACGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACATATTCGGTATTTTTACCTCCCTCCTCTCCCGACCTCAGATTACCTGAGTTTACTTGTCAGCTaGGTTTTATTTTCATCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KPHIRYFYLPPLPTSDYLSLLVS*VLFSSE Trigger: CTCCGATGAAAATAAAACCCAGCTGACAAGTAAACT...CAGGTAATCTGAGGTCGGGAGAGGAGGGAGGTAAAAATACCGAATATGTGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
||
| CDS-3UTR CCA 90 bp | GTTGTAAATGCCATTCCCATAGGCTACCCTTCATCTACACCTCAGTACTTAAAGATGTATCTGTTTTGGTaGCAGTCCAAGATCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VVNAIPIGYPSSTPQYLKMYLFW*QSKISV Trigger: TACCGAGATCTTGGACTGCCACCAAAACAGATACAT...CTTTAAGTACTGAGGTGTAGATGAAGGGTAGCCTATGGGAATGGCATTTACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR CCA 90 bp | GACAGTTGTAAATGCCATTCCCATAGGCTACCCTTCATCTACACCTCAGTACTTGTACTACTCTTGCTGTaGAGATTTCTAACAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSCKCHSHRLPFIYTSVLVLLLL*RFLTKN Trigger: GTTCTTTGTTAGAAATCTCCACAGCAAGAGTAGTAC...AAGTACTGAGGTGTAGATGAAGGGTAGCCTATGGGAATGGCATTTACAACTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR GCA 90 bp | AAATGGTTTCTTTTATCCAACAGGCAGCAATGTAGTTCCTCCAGGTTCTGTTTCTCATCGGAGACCAGTTaGTTAACAAAGGAGAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: KWFLLSNRQQCSSSRFCFSSETS*LTKERF Trigger: AAATCTCTCCTTTGTTAAGCAACTGGTCTCCGATGA...GAAACAGAACCTGGAGGAACTACATTGCTGCCTGTTGGATAAAAGAAACCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR CCA 90 bp | CTGTCACATGAAAGATTTTATGTATCTGTTTTGGTGGCAGTCCAAGATCTCGGTGTACTACTCTTGCTGTaGAGATTTCTAACAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSHERFYVSVLVAVQDLGVLLLL*RFLTKN Trigger: GTTCTTTGTTAGAAATCTCCACAGCAAGAGTAGTAC...ACCGAGATCTTGGACTGCCACCAAAACAGATACATAAAATCTTTCATGTGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
||
| CDS-3UTR CCA 90 bp | AAATGGTTTCTTTTATCCAACAGGCAGCAATGTAGTTCCTCCAGGTTCTGTTTCAGTTTACTTGTCAGCTaGGTTTTATTTTCATCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KWFLLSNRQQCSSSRFCFSLLVS*VLFSSE Trigger: CTCCGATGAAAATAAAACCCAGCTGACAAGTAAACT...GAAACAGAACCTGGAGGAACTACATTGCTGCCTGTTGGATAAAAGAAACCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR CCA 90 bp | TATCTGTCACATGAAAGATTTTATGTATCTGTTTTGGTGGCAGTCCAAGATCTCCATTATGGTCTTCCTTaGGAGTGTATTTTAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: YLSHERFYVSVLVAVQDLHYGLP*ECILTH Trigger: ATGTGTTAAAATACACTCCCAAGGAAGACCATAATG...GAGATCTTGGACTGCCACCAAAACAGATACATAAAATCTTTCATGTGACAGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
||
| CDS-3UTR CAA 90 bp | TCTGCCCAGCTTTTCCTCCCACACTGGCTTCTGCTGACACGGCTGGCAGTGCCTCCTTTACCAATAGTTTaGGCTGTGACATCCACATAC | + |
|
Preference number: 5 (lower is better) Translates to: SAQLFLPHWLLLTRLAVPPLPIV*AVTSTY Trigger: GTATGTGGATGTCACAGCCAAAACTATTGGTAAAGG...AGGCACTGCCAGCCGTGTCAGCAGAAGCCAGTGTGGGAGGAAAAGCTGGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR CAA 90 bp | AGACAGTCTGGTTGTATAGCTCCAGCTGGCCTTGAATTCAAATCCACTACCTTCGGGAAAGGCAGGTTCTaGCAGGAATCCTTGTATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQSGCIAPAGLEFKSTTFGKGRF*QESLYA Trigger: TGCATACAAGGATTCCTGCAAGAACCTGCCTTTCCC...GAAGGTAGTGGATTTGAATTCAAGGCCAGCTGGAGCTATACAACCAGACTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR CAA 90 bp | GACAGTTGTAAATGCCATTCCCATAGGCTACCCTTCATCTACACCTCAGTACTTTTCTTGCAGGAATCCTaGTATGCAGGCAGTGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DSCKCHSHRLPFIYTSVLFLQES*YAGSVE Trigger: CTCTACACTGCCTGCATACAAGGATTCCTGCAAGAA...AAGTACTGAGGTGTAGATGAAGGGTAGCCTATGGGAATGGCATTTACAACTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR CAA 90 bp | AGCGTATTATTTCCAGCGCGGCTTTTGTTGTTTCTGAGACGCTCCTACAAAGAGCCATTATGGTCTTCCTaGGGAGTGTATTTTAACACA | + |
|
Preference number: 5 (lower is better) Translates to: SVLFPARLLLFLRRSYKEPLWSS*GVYFNT Trigger: TGTGTTAAAATACACTCCCAAGGAAGACCATAATGG...CTCTTTGTAGGAGCGTCTCAGAAACAACAAAAGCCGCGCTGGAAATAATACGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| CDS-3UTR CAA 90 bp | AAATGGTTTCTTTTATCCAACAGGCAGCAATGTAGTTCCTCCAGGTTCTGTTTCCCATTATGGTCTTCCTaGGGAGTGTATTTTAACACA | + |
|
Preference number: 5 (lower is better) Translates to: KWFLLSNRQQCSSSRFCFPLWSS*GVYFNT Trigger: TGTGTTAAAATACACTCCCAAGGAAGACCATAATGG...GAAACAGAACCTGGAGGAACTACATTGCTGCCTGTTGGATAAAAGAAACCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035177.15 |
||
| CDS-3UTR CAA 90 bp | AACCCACAAGTGTTTACAGAAGCTCTGAGAACATTTTATGGCCTGAAAACTTTCCCTTTACCAATAGTTTaGGCTGTGACATCCACATAC | + |
|
Preference number: 5 (lower is better) Translates to: NPQVFTEALRTFYGLKTFPLPIV*AVTSTY Trigger: GTATGTGGATGTCACAGCCAAAACTATTGGTAAAGG...GAAAGTTTTCAGGCCATAAAATGTTCTCAGAGCTTCTGTAAACACTTGTGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149243.8 |
||
| CDS-3UTR CAA 90 bp | AAAATACATGTTTGGGACTTTGTGTTTTGTTTAGCTTTACTGAAAGGGCTGACACCATTATGGTCTTCCTaGGGAGTGTATTTTAACACA | + |
|
Preference number: 5 (lower is better) Translates to: KIHVWDFVFCLALLKGLTPLWSS*GVYFNT Trigger: TGTGTTAAAATACACTCCCAAGGAAGACCATAATGG...TGTCAGCCCTTTCAGTAAAGCTAAACAAAACACAAAGTCCCAAACATGTATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131655.4 |
||
| CDS CCA 72 bp | TGCTTCTCTCTAAGCCGGGGTCAGCACCTAGGCCTCTaGCGCCACAGCCCAGCACCCGGGCGCCAGCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: CFSLSRGQHLGL*RHSPAPGRQPA Trigger: CGCAGGCTGGCGCCCGGGTGCTGGGCTGTGGCGCCAGAGGCCTAGGTGCTGACCCCGGCTTAGAGAGAAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142424.2 |
||
| CDS CCA 72 bp | TTCTTCTCTCTAAGCCGGGGTCAGCACCTAGGCCTCTaGCGCCACAGCCCAGCACCCGGGCGCCAGCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: FFSLSRGQHLGL*RHSPAPGRQPA Trigger: CGCAGGCTGGCGCCCGGGTGCTGGGCTGTGGCGCCAGAGGCCTAGGTGCTGACCCCGGCTTAGAGAGAAGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035177.15 ENSMUST00000131655.4 ENSMUST00000149243.8 ENSMUST00000190492.7 ENSMUST00000214036.2 |
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