Pregenerated sensors for MRPL28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024181Ensembl transcript IDs: ENSMUST00000025014.10, ENSMUST00000127647.3, ENSMUST00000236166.2, ENSMUST00000237950.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTaGGCCCAGTGCTCAGGCGTGGTCACCGGCTCTCTTCTGCACCAC | + |
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Preference number: 1 (lower is better) Translates to: SAHAKWGSPTAHRGG*AQCSGVVTGSLLHH Trigger: GTGGTGCAGAAGAGAGCCGGTGACCACGCCTGAGCACTGGGCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR GCA 90 bp | CACAGGAACTGTGTGCTCGGCACATGCCAAGTGGGGTTCGCCCACTaGCCACAGGGGAGGCTGAGCCCAGTGCTCAGGCGTGGTCACCGG | + |
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Preference number: 1 (lower is better) Translates to: HRNCVLGTCQVGFAH*PQGRLSPVLRRGHR Trigger: CCGGTGACCACGCCTGAGCACTGGGCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGCACACAGTTCCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR CCA 90 bp | GTGCTCAGGCGTGGTCACCGGCTCTCTTCTGCACCACTGCGGGCCTaGACAGAACCTGCTCCTGAAGCCGCTGGACCAGCTCCTCTACGT | + |
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Preference number: 1 (lower is better) Translates to: VLRRGHRLSSAPLRA*TEPAPEAAGPAPLR Trigger: ACGTAGAGGAGCTGGTCCAGCGGCTTCAGGAGCAGGTTCTGTCCAGGCCCGCAGTGGTGCAGAAGAGAGCCGGTGACCACGCCTGAGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR GCA 90 bp | TTTCTCCAGGGCCTCCTCCAGCGTCAGGCCAACCCACTCGGCCTCTaGCTCGGGGATGACAAAGCTCCTGTACTTGTCATAGATGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: FLQGLLQRQANPLGL*LGDDKAPVLVIDGC Trigger: GCAGCCATCTATGACAAGTACAGGAGCTTTGTCATCCCCGAGGCAGAGGCCGAGTGGGTTGGCCTGACGCTGGAGGAGGCCCTGGAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237950.2 |
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| 3UTR TCA 90 bp | TGCTCCGCTCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTaGAAAGTCTACCACAGGAACTGTGTGCTCGGCACATGCCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: CSAPGFHESWHRRVL*KVYHRNCVLGTCQV Trigger: CACTTGGCATGTGCCGAGCACACAGTTCCTGTGGTAGACTTTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGAGCGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGGCTGAGCCCAGTGCTCAGGCGTGGTCACCGGCTCTCTTCTGCACCACTGTGGGGTTCGCCCACTaGCCACAGGGGAGGCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: GEAEPSAQAWSPALFCTTVGFAH*PQGRLS Trigger: GCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCAC...AGTGGTGCAGAAGAGAGCCGGTGACCACGCCTGAGCACTGGGCTCAGCCTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTCAGGCGTGGTCACCGGCTCTCTTCTGCACCACTGCGGGCCTGGACAGAGTGGGGTTCGCCCACTaGCCACAGGGGAGGCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: SAQAWSPALFCTTAGLDRVGFAH*PQGRLS Trigger: GCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCAC...TCTGTCCAGGCCCGCAGTGGTGCAGAAGAGAGCCGGTGACCACGCCTGAGCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCACAGGGGAGGCTGAGCCCAGTGCTCAGGCGTGGTCACCGGCTCTCTTCGCACCACTGCGGGCCTaGACAGAACCTGCTCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LPTGEAEPSAQAWSPALFAPLRA*TEPAPE Trigger: TTCAGGAGCAGGTTCTGTCCAGGCCCGCAGTGGTGC...GAAGAGAGCCGGTGACCACGCCTGAGCACTGGGCTCAGCCTCCCCTGTGGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR-3UTR TCA 90 bp | CGGGCCTGGACAGAACCTGCTCCTGAAGCCGCTGGACCAGCTCCTCTACGTAGACCTCTACGTAGACCTTaGACAGGGGTACAGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: RAWTEPAPEAAGPAPLRRPLRRP*TGVQGP Trigger: AGGACCCTGTACCCCTGTTCAAGGTCTACGTAGAGG...TCTACGTAGAGGAGCTGGTCCAGCGGCTTCAGGAGCAGGTTCTGTCCAGGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGACCAGCTTGGACAGGCATCTGCTCCGCTCCAGGCTTCCACGAGTCCTGGCCCTCTGCCTCGGGGATaGCAAAGCTCCTGTACTTGT | + |
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Preference number: 2 (lower is better) Translates to: LDQLGQASAPLQASTSPGPLPRG*QSSCTC Trigger: ACAAGTACAGGAGCTTTGTCATCCCCGAGGCAGAGG...GCCAGGACTCGTGGAAGCCTGGAGCGGAGCAGATGCCTGTCCAAGCTGGTCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237950.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTGCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTCACAGAAGGGTTCTCTaGAAAGTCTACCACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: LCARHMPSGVRPLPTGEAHRRVL*KVYHRN Trigger: GTTCCTGTGGTAGACTTTTCAGAGAACCCTTCTGTG...AGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGCACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGCGCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTAGAAGGAGCCCACAGGGGAGGCTaGGCCCAGTGCTCAGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: CGAGCLRLLLISAQELEGAHRGG*AQCSGV Trigger: CACGCCTGAGCACTGGGCTCAGCCTCCCCTGTGGGC...TCCTTCTAGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTCAGGCGTGGTCACCGGCTCTCTTCTGCACCACTGCGGGCCTGGACAGACACAGAAGGGTTCTCTaGAAAGTCTACCACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: SAQAWSPALFCTTAGLDRHRRVL*KVYHRN Trigger: GTTCCTGTGGTAGACTTTTCAGAGAACCCTTCTGTG...TCTGTCCAGGCCCGCAGTGGTGCAGAAGAGAGCCGGTGACCACGCCTGAGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCGCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTAGAAGGACTGTGGGGTTCGCCCACTaGCCACAGGGGAGGCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: WRRLPQTVTYFSPRTRRTVGFAH*PQGRLS Trigger: GCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCAC...AGTCCTTCTAGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| 3UTR-3UTR GCA 90 bp | TTACTGTGGCGCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTAGAGTGGGGTTCGCCCACTaGCCACAGGGGAGGCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LLWRRLPQTVTYFSPRTRVGFAH*PQGRLS Trigger: GCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCAC...TCTAGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCACAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTACTGTGGCGCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTTGTGTGCTCGGCACATaGCAAGTGGGGTTCGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: TLLWRRLPQTVTYFSPRTCVLGT*QVGFAH Trigger: GTGGGCGAACCCCACTTGGCATGTGCCGAGCACACA...AGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCACAGTAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCGCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTAGAAGGACTCACAGAAGGGTTCTCTaGAAAGTCTACCACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: WRRLPQTVTYFSPRTRRTHRRVL*KVYHRN Trigger: GTTCCTGTGGTAGACTTTTCAGAGAACCCTTCTGTG...AGTCCTTCTAGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGCGCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTAGAAGGACACAGAAGGGTTCTCTaGAAAGTCTACCACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: CGAGCLRLLLISAQELEGHRRVL*KVYHRN Trigger: GTTCCTGTGGTAGACTTTTCAGAGAACCCTTCTGTG...TCCTTCTAGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| 3UTR CCA 72 bp | CTGCCCACAGGGGAGGCTGAGCCCAGTGCTCAGGCGTaGTCACCGGCTCTCTTCTGCACCACTGCGGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: LPTGEAEPSAQA*SPALFCTTAGL Trigger: CAGGCCCGCAGTGGTGCAGAAGAGAGCCGGTGACCACGCCTGAGCACTGGGCTCAGCCTCCCCTGTGGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR TCA 72 bp | GCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTaGGCCCAGTGCTCAGGCGTGGTCACCGGCTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: AKWGSPTAHRGG*AQCSGVVTGSL Trigger: AAGAGAGCCGGTGACCACGCCTGAGCACTGGGCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR GCA 72 bp | TGTGTGCTCGGCACATGCCAAGTGGGGTTCGCCCACTaGCCACAGGGGAGGCTGAGCCCAGTGCTCAGGCGT | + |
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Preference number: 3 (lower is better) Translates to: CVLGTCQVGFAH*PQGRLSPVLRR Trigger: ACGCCTGAGCACTGGGCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGCACACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR CCA 72 bp | CGTGGTCACCGGCTCTCTTCTGCACCACTGCGGGCCTaGACAGAACCTGCTCCTGAAGCCGCTGGACCAGCT | + |
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Preference number: 3 (lower is better) Translates to: RGHRLSSAPLRA*TEPAPEAAGPA Trigger: AGCTGGTCCAGCGGCTTCAGGAGCAGGTTCTGTCCAGGCCCGCAGTGGTGCAGAAGAGAGCCGGTGACCACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR GCA 72 bp | GGCCTCCTCCAGCGTCAGGCCAACCCACTCGGCCTCTaGCTCGGGGATGACAAAGCTCCTGTACTTGTCATA | + |
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Preference number: 3 (lower is better) Translates to: GLLQRQANPLGL*LGDDKAPVLVI Trigger: TATGACAAGTACAGGAGCTTTGTCATCCCCGAGGCAGAGGCCGAGTGGGTTGGCCTGACGCTGGAGGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237950.2 |
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| 3UTR TCA 72 bp | GCGTCAGGCCAACCCACTCGGCCTCTGCCTCGGGGATaGCAAAGCTCCTGTACTTGTCATAGATGGCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: ASGQPTRPLPRG*QSSCTCHRWLL Trigger: GAGCAGCCATCTATGACAAGTACAGGAGCTTTGTCATCCCCGAGGCAGAGGCCGAGTGGGTTGGCCTGACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237950.2 |
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| 3UTR TCA 72 bp | CCTGAAGCCGCTGGACCAGCTCCTCTACGTAGACCTTaGACAGGGGTACAGGGTCCTTTTCCTCCAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: PEAAGPAPLRRP*TGVQGPFPPEA Trigger: GGCTTCTGGAGGAAAAGGACCCTGTACCCCTGTTCAAGGTCTACGTAGAGGAGCTGGTCCAGCGGCTTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| 3UTR TCA 72 bp | CCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTaGAAAGTCTACCACAGGAACTGTGTGCTCGGCACA | + |
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Preference number: 3 (lower is better) Translates to: PGFHESWHRRVL*KVYHRNCVLGT Trigger: TGTGCCGAGCACACAGTTCCTGTGGTAGACTTTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| 3UTR TCA 72 bp | ACTGTTACTTATTTCAGCCCAAGAACTAGAAGGACTTaGCCAGCTTGGACAGGCATCTGCTCCGCTCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: TVTYFSPRTRRT*PAWTGICSAPG Trigger: GCCTGGAGCGGAGCAGATGCCTGTCCAAGCTGGTCAAGTCCTTCTAGTTCTTGGGCTGAAATAAGTAACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| 3UTR GCA 72 bp | TCCAAGCAAACCAACACACTTTACTGTGGCGCAGGCTaGCTCAGACTGTTACTTATTTCAGCCCAAGAACTA | + |
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Preference number: 3 (lower is better) Translates to: SKQTNTLYCGAG*LRLLLISAQEL Trigger: TAGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCACAGTAAAGTGTGTTGGTTTGCTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CCA 90 bp | GCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGCCCGCACCACTGCGGGCCTaGACAGAACCTGCTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: ARHMPSGVRPLPTGEAEPAPLRA*TEPAPE Trigger: TTCAGGAGCAGGTTCTGTCCAGGCCCGCAGTGGTGC...GGGCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025014.10 ENSMUST00000236166.2 |
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| CDS-3UTR GCA 90 bp | GCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGCCCTCAACGCGCTCGCGCTaGCCATTCTTGGGGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: ARHMPSGVRPLPTGEAEPSTRSR*PFLGLI Trigger: GATCAACCCCAAGAATGGGCAGCGCGAGCGCGTTGA...GGGCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGGGCCTCCTCCAGCGTCAGGCCAACCCACTCGGCCTCTGCCTCGGGGATCTCGCTTCAGGTCCATaGCAAACTTGGAGCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LQGLLQRQANPLGLCLGDLASGP*QTWSPG Trigger: ACCTGGGCTCCAAGTTTGGCATGGACCTGAAGCGAG...ATCCCCGAGGCAGAGGCCGAGTGGGTTGGCCTGACGCTGGAGGAGGCCCTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237950.2 |
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| CDS-3UTR TCA 90 bp | GCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGCCCTGTAAAGCTCCCGAGTaGACAGCTGTGGCTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: ARHMPSGVRPLPTGEAEPCKAPE*TAVAST Trigger: TGTGGAAGCCACAGCTGTTCACTCGGGAGCTTTACA...GGGCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR TCA 90 bp | GTGCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGCCATAGGCCTCATCGATaGGATCCAGGGTCCTCATGG | + |
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Preference number: 4 (lower is better) Translates to: VLGTCQVGFAHCPQGRLSHRPHR*DPGSSW Trigger: CCATGAGGACCCTGGATCTCATCGATGAGGCCTATG...GCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR TCA 90 bp | GTGCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGCCCTCTACGTAGACCTTaGACAGGGGTACAGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VLGTCQVGFAHCPQGRLSPLRRP*TGVQGP Trigger: AGGACCCTGTACCCCTGTTCAAGGTCTACGTAGAGG...GCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025014.10 |
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| CDS-3UTR GCA 90 bp | GGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGCCCAGTGAGCTTCTGCCACAGGTaGACAGGATACCTGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GTCQVGFAHCPQGRLSPVSFCHR*TGYLCS Trigger: GCTGCACAGGTATCCTGTGCACCTGTGGCAGAAGCT...CACTGGGCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR GCA 90 bp | GGGGAGGCTGAGCCCAGTGCTCAGGCGTGGTCACCGGCTCTCTTCTGCACCACTTCAACGCGCTCGCGCTaGCCATTCTTGGGGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: GEAEPSAQAWSPALFCTTSTRSR*PFLGLI Trigger: GATCAACCCCAAGAATGGGCAGCGCGAGCGCGTTGA...AGTGGTGCAGAAGAGAGCCGGTGACCACGCCTGAGCACTGGGCTCAGCCTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| CDS-3UTR CCA 90 bp | CTGCACCACTGCGGGCCTGGACAGAACCTGCTCCTGAAGCCGCTGGACCAGCTCGGTCCATGCCAAACTTaGAGCCCAGGTCCCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LHHCGPGQNLLLKPLDQLGPCQT*SPGPLL Trigger: AAGCAGGGGACCTGGGCTCCAAGTTTGGCATGGACC...GAGCTGGTCCAGCGGCTTCAGGAGCAGGTTCTGTCCAGGCCCGCAGTGGTGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237950.2 |
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| CDS-3UTR TCA 90 bp | GGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGCCCAGTGTGTAAAGCTCCCGAGTaGACAGCTGTGGCTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: GTCQVGFAHCPQGRLSPVCKAPE*TAVAST Trigger: TGTGGAAGCCACAGCTGTTCACTCGGGAGCTTTACA...CACTGGGCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR GCA 90 bp | TGTGCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGAGCTTCTGCCACAGGTaGACAGGATACCTGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CARHMPSGVRPLPTGEAESFCHR*TGYLCS Trigger: GCTGCACAGGTATCCTGTGCACCTGTGGCAGAAGCT...CTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR GCA 90 bp | CTGCACCACTGCGGGCCTGGACAGAACCTGCTCCTGAAGCCGCTGGACCAGCTCAGCTTCTGCCACAGGTaGACAGGATACCTGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LHHCGPGQNLLLKPLDQLSFCHR*TGYLCS Trigger: GCTGCACAGGTATCCTGTGCACCTGTGGCAGAAGCT...GAGCTGGTCCAGCGGCTTCAGGAGCAGGTTCTGTCCAGGCCCGCAGTGGTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| CDS-3UTR GCA 90 bp | TGTGCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGCTCGCTTCAGGTCCATaGCAAACTTGGAGCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CARHMPSGVRPLPTGEAELASGP*QTWSPG Trigger: ACCTGGGCTCCAAGTTTGGCATGGACCTGAAGCGAG...CTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CCA 90 bp | ACCACAGGAACTGTGTGCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACTTCTCAGGGTGGAGATaGGGGTCCTGGCGAGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: TTGTVCSAHAKWGSPTAHFSGWR*GSWRAS Trigger: GCTTGCTCGCCAGGACCCCCATCTCCACCCTGAGAA...GTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGCACACAGTTCCTGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 |
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| CDS-3UTR CCA 90 bp | CACAGGAACTGTGTGCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGCACCACTGCGGGCCTaGACAGAACCTGCTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: HRNCVLGTCQVGFAHCPQAPLRA*TEPAPE Trigger: TTCAGGAGCAGGTTCTGTCCAGGCCCGCAGTGGTGC...CTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGCACACAGTTCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025014.10 ENSMUST00000236166.2 |
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| CDS-3UTR GCA 90 bp | ACCACAGGAACTGTGTGCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACTCAACGCGCTCGCGCTaGCCATTCTTGGGGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: TTGTVCSAHAKWGSPTAHSTRSR*PFLGLI Trigger: GATCAACCCCAAGAATGGGCAGCGCGAGCGCGTTGA...GTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGCACACAGTTCCTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CCA 90 bp | GGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGCCCAGTGCCTTCTTCACCCTCTTaGAGAGCTTGTCGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTCQVGFAHCPQGRLSPVPSSPS*RACRCW Trigger: CCAACAACGACAAGCTCTCCAAGAGGGTGAAGAAGG...CACTGGGCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR TCA 90 bp | TGCTCAGGCGTGGTCACCGGCTCTCTTCTGCACCACTGCGGGCCTGGACAGAACTGTAAAGCTCCCGAGTaGACAGCTGTGGCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CSGVVTGSLLHHCGPGQNCKAPE*TAVAST Trigger: TGTGGAAGCCACAGCTGTTCACTCGGGAGCTTTACA...GTTCTGTCCAGGCCCGCAGTGGTGCAGAAGAGAGCCGGTGACCACGCCTGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| CDS-3UTR TCA 90 bp | GTTTCTCCAGGGCCTCCTCCAGCGTCAGGCCAACCCACTCGGCCTCTGCCTCGGGTCCCCTGCTTGCCTTaGGAATATAGAAGTCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: VSPGPPPASGQPTRPLPRVPCLP*EYRSQI Trigger: GATTTGACTTCTATATTCTCAAGGCAAGCAGGGGAC...CCGAGGCAGAGGCCGAGTGGGTTGGCCTGACGCTGGAGGAGGCCCTGGAGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237950.2 |
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| CDS-3UTR CCA 90 bp | CATCTGCTCCGCTCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTGAAATTCTCAGGGTGGAGATaGGGGTCCTGGCGAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLLRSRLPRVLAQKGSLKFSGWR*GSWRAS Trigger: GCTTGCTCGCCAGGACCCCCATCTCCACCCTGAGAA...TTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGAGCGGAGCAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 |
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| CDS-3UTR CCA 90 bp | CCGCTCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTGAAAAGTCTACCTCAGGGTTCTCAGGGTaGAGATGGGGGTCCTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PLQASTSPGTEGFSEKSTSGFSG*RWGSWR Trigger: TCGCCAGGACCCCCATCTCCACCCTGAGAACCCTGA...GGTAGACTTTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGAGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTCCTGAAGCCGCTGGACCAGCTCCTCTACGTAGACCTTGAACAGGGGTACAGCTTCTGCCACAGGTaGACAGGATACCTGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLKPLDQLLYVDLEQGYSFCHR*TGYLCS Trigger: GCTGCACAGGTATCCTGTGCACCTGTGGCAGAAGCT...GTACCCCTGTTCAAGGTCTACGTAGAGGAGCTGGTCCAGCGGCTTCAGGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| CDS-3UTR GCA 90 bp | CATCTGCTCCGCTCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTGAAATCAACGCGCTCGCGCTaGCCATTCTTGGGGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: HLLRSRLPRVLAQKGSLKSTRSR*PFLGLI Trigger: GATCAACCCCAAGAATGGGCAGCGCGAGCGCGTTGA...TTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGAGCGGAGCAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CCA 90 bp | CGCTCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTGAAAAGTCTACCATCAGGGTTCTCAGGGTaGAGATGGGGGTCCTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RSRLPRVLAQKGSLKSLPSGFSG*RWGSWR Trigger: TCGCCAGGACCCCCATCTCCACCCTGAGAACCCTGA...TGGTAGACTTTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGAGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 |
||
| CDS-3UTR TCA 90 bp | GACCAGCTTGGACAGGCATCTGCTCCGCTCCAGGCTTCCACGAGTCCTGGCACATGGTCACAGTCACGGTaGACTTCTTGTCCAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: DQLGQASAPLQASTSPGTWSQSR*TSCPGF Trigger: AAATCCTGGACAAGAAGTTCACCGTGACTGTGACCA...TGTGCCAGGACTCGTGGAAGCCTGGAGCGGAGCAGATGCCTGTCCAAGCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR TCA 90 bp | GCTCCGCTCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTGAAAAGTCTCCTCTGCCTCGGGGATaGCAAAGCTCCTGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: APLQASTSPGTEGFSEKSPLPRG*QSSCTC Trigger: ACAAGTACAGGAGCTTTGTCATCCCCGAGGCAGAGG...AGACTTTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGAGCGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025014.10 ENSMUST00000236166.2 |
||
| CDS-3UTR TCA 90 bp | CATCTGCTCCGCTCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTGAAACCTCTGCCTCGGGGATaGCAAAGCTCCTGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLLRSRLPRVLAQKGSLKPLPRG*QSSCTC Trigger: ACAAGTACAGGAGCTTTGTCATCCCCGAGGCAGAGG...TTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGAGCGGAGCAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025014.10 ENSMUST00000236166.2 |
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| CDS-3UTR GCA 90 bp | TCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTGAAAAGTCTACCACAGCGCAGCCGCAGCTTCTaGCACAGGTGCACAGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: SRLPRVLAQKGSLKSLPQRSRSF*HRCTGY Trigger: GTATCCTGTGCACCTGTGGCAGAAGCTGCGGCTGCG...CTGTGGTAGACTTTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR GCA 90 bp | CCGCTCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTGAAAAGTCTACCCTCGCTTCAGGTCCATaGCAAACTTGGAGCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLQASTSPGTEGFSEKSTLASGP*QTWSPG Trigger: ACCTGGGCTCCAAGTTTGGCATGGACCTGAAGCGAG...GGTAGACTTTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CCA 90 bp | GCACAGAAGGGTTCTCTGAAAAGTCTACCACAGGAACTGTGTGCTCGGCACATGTGGAGATGGGGGTCCTaGCGAGCAAGCCTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQKGSLKSLPQELCARHMWRWGS*RASLSS Trigger: GCTGCTGAGGCTTGCTCGCCAGGACCCCCATCTCCA...CATGTGCCGAGCACACAGTTCCTGTGGTAGACTTTTCAGAGAACCCTTCTGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR TCA 90 bp | CATCTGCTCCGCTCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTGAAATGTAAAGCTCCCGAGTaGACAGCTGTGGCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HLLRSRLPRVLAQKGSLKCKAPE*TAVAST Trigger: TGTGGAAGCCACAGCTGTTCACTCGGGAGCTTTACA...TTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGAGCGGAGCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR TCA 90 bp | GCACAGAAGGGTTCTCTGAAAAGTCTACCACAGGAACTGTGTGCTCGGCACATGCATAGGCCTCATCGATaGGATCCAGGGTCCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: AQKGSLKSLPQELCARHMHRPHR*DPGSSW Trigger: CCATGAGGACCCTGGATCTCATCGATGAGGCCTATG...CATGTGCCGAGCACACAGTTCCTGTGGTAGACTTTTCAGAGAACCCTTCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CCA 90 bp | GCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTAGAAGGACTTGACTTCTCAGGGTGGAGATaGGGGTCCTGGCGAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGCLRLLLISAQELEGLDFSGWR*GSWRAS Trigger: GCTTGCTCGCCAGGACCCCCATCTCCACCCTGAGAA...GTCAAGTCCTTCTAGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 |
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| CDS-3UTR CCA 90 bp | ACTTTACTGTGGCGCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTTCAGGGTTCTCAGGGTaGAGATGGGGGTCCTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TLLWRRLPQTVTYFSPRTSGFSG*RWGSWR Trigger: TCGCCAGGACCCCCATCTCCACCCTGAGAACCCTGA...AGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCACAGTAAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCGCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTAGAAGGACTCGCTTCAGGTCCATaGCAAACTTGGAGCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CGAGCLRLLLISAQELEGLASGP*QTWSPG Trigger: ACCTGGGCTCCAAGTTTGGCATGGACCTGAAGCGAG...TCCTTCTAGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CCA 90 bp | TCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTGAAAAGTCTACCACAGCCTTCTTCACCCTCTTaGAGAGCTTGTCGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRLPRVLAQKGSLKSLPQPSSPS*RACRCW Trigger: CCAACAACGACAAGCTCTCCAAGAGGGTGAAGAAGG...CTGTGGTAGACTTTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR TCA 90 bp | ACTTTACTGTGGCGCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTCATAGGCCTCATCGATaGGATCCAGGGTCCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLWRRLPQTVTYFSPRTHRPHR*DPGSSW Trigger: CCATGAGGACCCTGGATCTCATCGATGAGGCCTATG...AGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCACAGTAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CCA 90 bp | CTGTGGCGCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTAGAAGGCCTTCTTCACCCTCTTaGAGAGCTTGTCGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWRRLPQTVTYFSPRTRRPSSPS*RACRCW Trigger: CCAACAACGACAAGCTCTCCAAGAGGGTGAAGAAGG...CCTTCTAGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CCA 90 bp | TGGCGCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTAGAAGGACTCCTTCTTCACCCTCTTaGAGAGCTTGTCGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WRRLPQTVTYFSPRTRRTPSSPS*RACRCW Trigger: CCAACAACGACAAGCTCTCCAAGAGGGTGAAGAAGG...AGTCCTTCTAGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR GCA 90 bp | ACTTTACTGTGGCGCAGGCTGCCTCAGACTGTTACTTATTTCAGCCCAAGAACTCCCAGGTCCCCTGCTTaGCTTGAGAATATAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLLWRRLPQTVTYFSPRTPRSPA*LENIEV Trigger: GACTTCTATATTCTCAAGGCAAGCAGGGGACCTGGG...AGTTCTTGGGCTGAAATAAGTAACAGTCTGAGGCAGCCTGCGCCACAGTAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237950.2 |
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| CDS CCA 90 bp | TGTACCGGGGTCGGCGTCCGTTCTTCTTCCAGTGAGCGCAAGAAGTaGGCGGGCAAGCGCGCACAGATGCCCTGCCGCAGCCGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CTGVGVRSSSSERKK*AGKRAQMPCRSRSF Trigger: GAAGCTGCGGCTGCGGCAGGGCATCTGTGCGCGCTTGCCCGCCCACTTCTTGCGCTCACTGGAAGAAGAACGGACGCCGACCCCGGTACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS GCA 90 bp | TCCAGTGAGCGCAAGAAGTGGGCGGGCAAGCGCGCACAGATGCCCTaGCGCAGCCGCAGCTTCTGCCACAGGTGCACAGGATACCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSERKKWAGKRAQMP*RSRSFCHRCTGYLC Trigger: GCACAGGTATCCTGTGCACCTGTGGCAGAAGCTGCGGCTGCGGCAGGGCATCTGTGCGCGCTTGCCCGCCCACTTCTTGCGCTCACTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CAA 90 bp | GCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGCCCAGGTCCATGCCAAACTaGGAGCCCAGGTCCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: ARHMPSGVRPLPTGEAEPRSMPN*EPRSSL Trigger: TAAGGAGGACCTGGGCTCCAAGTTTGGCATGGACCT...GGGCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 |
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| CDS TCA 90 bp | GTGAGGTTTGTAGTGTACCGGGGTCGGCGTCCGTTCTTCTTCCAGTaGGCGCAAGAAGTGGGCGGGCAAGCGCGCACAGATGCCCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VRFVVYRGRRPFFFQ*AQEVGGQARTDALP Trigger: CGGCAGGGCATCTGTGCGCGCTTGCCCGCCCACTTCTTGCGCTCACTGGAAGAAGAACGGACGCCGACCCCGGTACACTACAAACCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CAA 90 bp | CTCCAGGGCCTCCTCCAGCGTCAGGCCAACCCACTCGGCCTCTGCCTCGGGGATTGCCCATTCTTGGGGTaGATCTTGAACTTGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LQGLLQRQANPLGLCLGDCPFLG*ILNLVP Trigger: CGGGACCAAGTTCAAGATCAACCCCAAGAATGGGCA...ATCCCCGAGGCAGAGGCCGAGTGGGTTGGCCTGACGCTGGAGGAGGCCCTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237950.2 |
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| CDS-3UTR CAA 90 bp | AGTGCTCAGGCGTGGTCACCGGCTCTCTTCTGCACCACTGCGGGCCTGGACAGAAGGTCCATGCCAAACTaGGAGCCCAGGTCCCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SAQAWSPALFCTTAGLDRRSMPN*EPRSPA Trigger: AGCAGGGGACCTGGGCTCCAAGTTTGGCATGGACCT...TCTGTCCAGGCCCGCAGTGGTGCAGAAGAGAGCCGGTGACCACGCCTGAGCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237950.2 |
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| CDS CCA 90 bp | CTCTCCACCCCACAGTCCCTGCTGGGACTCTGGAGGGTAGTGAACTaGAATGGGTACGTCCTCAACGCGCTCGCGCTGCCCATTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSTPQSLLGLWRVVN*NGYVLNALALPILG Trigger: CCCAAGAATGGGCAGCGCGAGCGCGTTGAGGACGTACCCATTCCAGTTCACTACCCTCCAGAGTCCCAGCAGGGACTGTGGGGTGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CAA 90 bp | GGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGCCCAGTGTCGCGCTGCCCATTCTaGGGGTTGATCTTGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTCQVGFAHCPQGRLSPVSRCPF*GLILNL Trigger: CAAGTTCAAGATCAACCCCAAGAATGGGCAGCGCGA...CACTGGGCTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CAA 90 bp | TGTGCTCGGCACATGCCAAGTGGGGTTCGCCCACTGCCCACAGGGGAGGCTGAGTGCCCATTCTTGGGGTaGATCTTGAACTTGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CARHMPSGVRPLPTGEAECPFLG*ILNLVP Trigger: CGGGACCAAGTTCAAGATCAACCCCAAGAATGGGCA...CTCAGCCTCCCCTGTGGGCAGTGGGCGAACCCCACTTGGCATGTGCCGAGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS-3UTR CAA 90 bp | CTCAGGCGTGGTCACCGGCTCTCTTCTGCACCACTGCGGGCCTGGACAGAACCTTGCCCATTCTTGGGGTaGATCTTGAACTTGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LRRGHRLSSAPLRAWTEPCPFLG*ILNLVP Trigger: CGGGACCAAGTTCAAGATCAACCCCAAGAATGGGCA...AGGTTCTGTCCAGGCCCGCAGTGGTGCAGAAGAGAGCCGGTGACCACGCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127647.3 ENSMUST00000237950.2 |
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| CDS-3UTR CAA 90 bp | CCGCTCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTGAAAAGTCTACCAGGTCCATGCCAAACTaGGAGCCCAGGTCCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PLQASTSPGTEGFSEKSTRSMPN*EPRSSL Trigger: TAAGGAGGACCTGGGCTCCAAGTTTGGCATGGACCT...GGTAGACTTTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 |
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| CDS-3UTR CAA 90 bp | CTGCTCCGCTCCAGGCTTCCACGAGTCCTGGCACAGAAGGGTTCTCTGAAAAGTTGCCCATTCTTGGGGTaGATCTTGAACTTGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLRSRLPRVLAQKGSLKSCPFLG*ILNLVP Trigger: CGGGACCAAGTTCAAGATCAACCCCAAGAATGGGCA...ACTTTTCAGAGAACCCTTCTGTGCCAGGACTCGTGGAAGCCTGGAGCGGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
||
| CDS-3UTR CAA 90 bp | GCACAGAAGGGTTCTCTGAAAAGTCTACCACAGGAACTGTGTGCTCGGCACATGAGGTCCATGCCAAACTaGGAGCCCAGGTCCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: AQKGSLKSLPQELCARHMRSMPN*EPRSSL Trigger: TAAGGAGGACCTGGGCTCCAAGTTTGGCATGGACCT...CATGTGCCGAGCACACAGTTCCTGTGGTAGACTTTTCAGAGAACCCTTCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 |
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| CDS CCA 90 bp | CTTCTTGTCCAGGATTTCACTGTAAAGCTCCCGAGTGAACAGCTGTaGCTTCCACACCTTCTTCACCCTCTTGGAGAGCTTGTCGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLVQDFTVKLPSEQL*LPHLLHPLGELVVV Trigger: AACAACGACAAGCTCTCCAAGAGGGTGAAGAAGGTGTGGAAGCCACAGCTGTTCACTCGGGAGCTTTACAGTGAAATCCTGGACAAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
||
| CDS GCA 72 bp | CGCAAGAAGTGGGCGGGCAAGCGCGCACAGATGCCCTaGCGCAGCCGCAGCTTCTGCCACAGGTGCACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RKKWAGKRAQMP*RSRSFCHRCTG Trigger: TCCTGTGCACCTGTGGCAGAAGCTGCGGCTGCGGCAGGGCATCTGTGCGCGCTTGCCCGCCCACTTCTTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS CCA 72 bp | GTCGGCGTCCGTTCTTCTTCCAGTGAGCGCAAGAAGTaGGCGGGCAAGCGCGCACAGATGCCCTGCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VGVRSSSSERKK*AGKRAQMPCRS Trigger: GCTGCGGCAGGGCATCTGTGCGCGCTTGCCCGCCCACTTCTTGCGCTCACTGGAAGAAGAACGGACGCCGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS CCA 72 bp | CCACAGTCCCTGCTGGGACTCTGGAGGGTAGTGAACTaGAATGGGTACGTCCTCAACGCGCTCGCGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: PQSLLGLWRVVN*NGYVLNALALP Trigger: GGGCAGCGCGAGCGCGTTGAGGACGTACCCATTCCAGTTCACTACCCTCCAGAGTCCCAGCAGGGACTGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS GCA 72 bp | GAGCAAGCCTCAGCAGCATCCCTCGCTTCAGGTCCATaGCAAACTTGGAGCCCAGGTCCCCTGCTTGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: EQASAASLASGP*QTWSPGPLLAL Trigger: CAAGGCAAGCAGGGGACCTGGGCTCCAAGTTTGGCATGGACCTGAAGCGAGGGATGCTGCTGAGGCTTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237950.2 |
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| CDS CCA 72 bp | GTCCCTGCTGGGACTCTGGAGGGTAGTGAACTGGAATaGGTACGTCCTCAACGCGCTCGCGCTGCCCATTCT | + |
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Preference number: 6 (lower is better) Translates to: VPAGTLEGSELE*VRPQRARAAHS Trigger: AGAATGGGCAGCGCGAGCGCGTTGAGGACGTACCCATTCCAGTTCACTACCCTCCAGAGTCCCAGCAGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS GCA 72 bp | CAACCCACTCGGCCTCCTGTACTTGTCATAGATGGCTaGTCTCCGCTCAGGGTTCTCAGGGTGGAGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: QPTRPPVLVIDG*SPLRVLRVEMG Trigger: CCCCATCTCCACCCTGAGAACCCTGAGCGGAGAGCAGCCATCTATGACAAGTACAGGAGGCCGAGTGGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127647.3 |
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| CDS GCA 72 bp | GGGGATGACAAAGCTCCTGTACTTGTCATAGATGGCTaGTCTCCGCTCAGGGTTCTCAGGGTGGAGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: GDDKAPVLVIDG*SPLRVLRVEMG Trigger: CCCCATCTCCACCCTGAGAACCCTGAGCGGAGAGCAGCCATCTATGACAAGTACAGGAGCTTTGTCATCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025014.10 ENSMUST00000236166.2 |
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| CDS CAA 72 bp | CTCAGCAGCATCCCTCGCTTCAGGTCCATGCCAAACTaGGAGCCCAGGTCCTCCTTAGGGGTCTTGAGAATA | + |
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Preference number: 6 (lower is better) Translates to: LSSIPRFRSMPN*EPRSSLGVLRI Trigger: TATTCTCAAGACCCCTAAGGAGGACCTGGGCTCCAAGTTTGGCATGGACCTGAAGCGAGGGATGCTGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 |
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| CDS TCA 72 bp | ACTTCTTGTCCAGGATTTCACTGTAAAGCTCCCGAGTaGACAGCTGTGGCTTCCACACCTTCTTCACCCTCT | + |
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Preference number: 6 (lower is better) Translates to: TSCPGFHCKAPE*TAVASTPSSPS Trigger: AGAGGGTGAAGAAGGTGTGGAAGCCACAGCTGTTCACTCGGGAGCTTTACAGTGAAATCCTGGACAAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025014.10 ENSMUST00000127647.3 ENSMUST00000236166.2 ENSMUST00000237950.2 |
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| CDS TCA 72 bp | CATGCCAAACTTGGAGCCCAGGTCCCCTGCTTGCCTTaGGAATATAGAAGTCAAATCCATAGGCCTCATCGA | + |
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Preference number: 6 (lower is better) Translates to: HAKLGAQVPCLP*EYRSQIHRPHR Trigger: TCGATGAGGCCTATGGATTTGACTTCTATATTCTCAAGGCAAGCAGGGGACCTGGGCTCCAAGTTTGGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237950.2 |
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