Pregenerated sensors for MRPL24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019710Ensembl transcript IDs: ENSMUST00000019854.13, ENSMUST00000119968.8, ENSMUST00000121048.2, ENSMUST00000121920.8, ENSMUST00000137775.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGCCTGAGCTCCCCAAAATaGAAGCACTTGGGAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GPSCSHLQTSGPIPGKASLSSPK*KHLGEA Trigger: TGCCTCTCCCAAGTGCTTGCATTTTGGGGAGCTCAG...GCTAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGCAGACAAGAAGAAAAGCTaGACTGTGCCTGAGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: GLLAPISKHQDLSLGRLADKKKS*TVPELP Trigger: GGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTC...TGCTAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGACAAGAAGAAAAGCTaGACTGTGCCTGAGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: RGLLAPISKHQDLSLGRLDKKKS*TVPELP Trigger: GGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTC...TAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGCACCTCTACCATCAAGGTaGAAACTGGACAGGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GLLAPISKHQDLSLGRLAPLPSR*KLDRQK Trigger: CTTCTGCCTGTCCAGTTTTCACCTTGATGGTAGAGG...TGCTAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTACTACCCAGTCTATCCTaGCAAGAAGAAAAGCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: RGLLAPISKHQDLSLGRLLPSLS*QEEKLH Trigger: GTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAG...TAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGCACATCAAGGTGAAAACTaGACAGGCAGAAGCAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: GLLAPISKHQDLSLGRLAHQGEN*TGRSST Trigger: AGTGCTGCTTCTGCCTGTCCAGTTTTCACCTTGATG...TGCTAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCTGAGCTCCCCAAAATaGAAGCACTTGGGAGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: REKNRGAFLLPSPNIRTYLSSPK*KHLGEA Trigger: TGCCTCTCCCAAGTGCTTGCATTTTGGGGAGCTCAG...ATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR-3UTR CCA 90 bp | CCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCACATCAAGGTGAAAACTaGACAGGCAGAAGCAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: PTQSILTRRKAALCLSSPHQGEN*TGRSST Trigger: AGTGCTGCTTCTGCCTGTCCAGTTTTCACCTTGATG...TGGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCCATCAAGGTGAAAACTaGACAGGCAGAAGCAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: TYPVYPDKKKSCTVPELPHQGEN*TGRSST Trigger: AGTGCTGCTTCTGCCTGTCCAGTTTTCACCTTGATG...GGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTCCTCTACCATCAAGGTaGAAACTGGACAGGCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: IGKRTEGPSCSHLQTSGPPLPSR*KLDRQK Trigger: CTTCTGCCTGTCCAGTTTTCACCTTGATGGTAGAGG...AGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTCCTCTACCATCAAGGTaGAAACTGGACAGGCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: KRTEGPSCSHLQTSGPIPPLPSR*KLDRQK Trigger: CTTCTGCCTGTCCAGTTTTCACCTTGATGGTAGAGG...AGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGAAGGCTAGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGCATCAAGGTGAAAACTaGACAGGCAGAAGCAGCACT | + |
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Preference number: 2 (lower is better) Translates to: LGRLAPTQSILTRRKAALHQGEN*TGRSST Trigger: AGTGCTGCTTCTGCCTGTCCAGTTTTCACCTTGATG...CAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCTAGCCTTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTCTACCCAGTCTATCCTaGCAAGAAGAAAAGCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: IGKRTEGPSCSHLQTSGPLPSLS*QEEKLH Trigger: GTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAG...AGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR CCA 72 bp | AAAATGCAAGCACTTGGGAGAGGCAGAGGGGTAGTGTaGACAACGGCTGCTCTCAAGTCTCTTTATTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: KMQALGRGRGVV*TTAALKSLYWC Trigger: ACACCAATAAAGAGACTTGAGAGCAGCCGTTGTCCACACTACCCCTCTGCCTCTCCCAAGTGCTTGCATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | AGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGGGCTCTACCACTACTaGGCGCCGCCTGCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RGLLAPISKHQDLSLGRLGLYHY*APPAPW Trigger: CCATGGAGCAGGCGGCGCCCAGTAGTGGTAGAGCCC...TAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | GGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGCGGGAGGAAGTGGCTTTaGATGCCAAGGCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPSCSHLQTSGPIPGKASGRKWL*MPRPAG Trigger: CCCTGCTGGCCTTGGCATCCAAAGCCACTTCCTCCC...GCTAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | CCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCAGGGCTCTACCACTACTaGGCGCCGCCTGCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PTQSILTRRKAALCLSSPGLYHY*APPAPW Trigger: CCATGGAGCAGGCGGCGCCCAGTAGTGGTAGAGCCC...TGGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | AGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGGGAGGAAGTGGCTTTaGATGCCAAGGCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGLLAPISKHQDLSLGRLGRKWL*MPRPAG Trigger: CCCTGCTGGCCTTGGCATCCAAAGCCACTTCCTCCC...TAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGGCTCTACCACTACTaGGCGCCGCCTGCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KEQRGLLAPISKHQDLSLGLYHY*APPAPW Trigger: CCATGGAGCAGGCGGCGCCCAGTAGTGGTAGAGCCC...CAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | ATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTGGGCTCTACCACTACTaGGCGCCGCCTGCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: IGKRTEGPSCSHLQTSGPGLYHY*APPAPW Trigger: CCATGGAGCAGGCGGCGCCCAGTAGTGGTAGAGCCC...AGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | AGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCTACTGGGCGCCGCCTaGTCCATGGAGGATTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: STYPVYPDKKKSCTVPELLLGAA*SMEDSS Trigger: GGAAGAATCCTCCATGGAGCAGGCGGCGCCCAGTAG...GAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR TCA 90 bp | AGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAAAGAGCATCTTCCACTaGTGTGTCCTTGGGGCCATC | + |
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Preference number: 4 (lower is better) Translates to: RGLLAPISKHQDLSLGRLKSIFH*CVLGAI Trigger: GATGGCCCCAAGGACACATCAGTGGAAGATGCTCTT...TAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | ATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTCTACTGGGCGCCGCCTaGTCCATGGAGGATTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: IGKRTEGPSCSHLQTSGPLLGAA*SMEDSS Trigger: GGAAGAATCCTCCATGGAGCAGGCGGCGCCCAGTAG...AGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | GGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGCGGTGGTCCTTGGTTCTaGCAATGTATCGGTAATGCG | + |
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Preference number: 4 (lower is better) Translates to: GPSCSHLQTSGPIPGKASGGPWF*QCIGNA Trigger: CGCATTACCGATACATTGGCAGAACCAAGGACCACC...GCTAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | ATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTGGGAGGAAGTGGCTTTaGATGCCAAGGCCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IGKRTEGPSCSHLQTSGPGRKWL*MPRPAG Trigger: CCCTGCTGGCCTTGGCATCCAAAGCCACTTCCTCCC...AGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | AAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAGGAAGTGGCTTTaGATGCCAAGGCCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KRTEGPSCSHLQTSGPIPGRKWL*MPRPAG Trigger: CCCTGCTGGCCTTGGCATCCAAAGCCACTTCCTCCC...AGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | GGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGCAAATCTTCGAGTCTCCTaGATCCCCATGGCCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: GLLAPISKHQDLSLGRLANLRVS*IPMASI Trigger: GATGGAGGCCATGGGGATCCAGGAGACTCGAAGATT...TGCTAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR TCA 90 bp | ACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCCAGGATCCACTAGCTTaGCCTGGTGATGAAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: TYPVYPDKKKSCTVPELPQDPLA*PGDEAR Trigger: CCTTGCTTCATCACCAGGTCAAGCTAGTGGATCCTG...GGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR TCA 90 bp | CCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCACAGGATCCACTAGCTTaGCCTGGTGATGAAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: PTQSILTRRKAALCLSSPQDPLA*PGDEAR Trigger: CCTTGCTTCATCACCAGGTCAAGCTAGTGGATCCTG...TGGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | ACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCATCATGGTCCCTCGGTaGTCCTTGGTTCTGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: TYPVYPDKKKSCTVPELPIMVPR*SLVLPM Trigger: CATTGGCAGAACCAAGGACCACCGAGGGACCATGAT...GGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | CCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCAATCATGGTCCCTCGGTaGTCCTTGGTTCTGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: PTQSILTRRKAALCLSSPIMVPR*SLVLPM Trigger: CATTGGCAGAACCAAGGACCACCGAGGGACCATGAT...TGGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR TCA 90 bp | AGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCAGGATCCACTAGCTTaGCCTGGTGATGAAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: STYPVYPDKKKSCTVPELQDPLA*PGDEAR Trigger: CCTTGCTTCATCACCAGGTCAAGCTAGTGGATCCTG...GAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | ACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCTGGACTACTTTGCCTTaGTTCCCAGCATCCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: TYPVYPDKKKSCTVPELPWTTLP*FPASLP Trigger: AGGCAAGGATGCTGGGAAGCAAGGCAAAGTAGTCCA...GGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | ACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCAGTCTTCATCAGAGATaGGCTCTACCACTACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: TYPVYPDKKKSCTVPELPSLHQR*ALPLLG Trigger: GCCCAGTAGTGGTAGAGCCCATCTCTGATGAAGACT...GGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | ACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCTCCACTGGATCTCAGTaGGTTTCCTGTCCACAGGAT | + |
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Preference number: 4 (lower is better) Translates to: TYPVYPDKKKSCTVPELPSTGSQ*VSCPQD Trigger: ATCCTGTGGACAGGAAACCCACTGAGATCCAGTGGA...GGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | GGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGCTCAGTAAATCTCCACTaGATCTCAGTGGGTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: GPSCSHLQTSGPIPGKASSVNLH*ISVGFL Trigger: CAGGAAACCCACTGAGATCCAGTGGAGATTTACTGA...GCTAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | ACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCCCACTGATGTGTCCTTaGGGCCATCAGTCCATGTTT | + |
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Preference number: 4 (lower is better) Translates to: TYPVYPDKKKSCTVPELPPLMCP*GHQSMF Trigger: AAACATGGACTGATGGCCCCAAGGACACATCAGTGG...GGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | AGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAATTCTTCCTTTTGTCTaGTATGGAACCTGGACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLLAPISKHQDLSLGRLILPFV*YGTWTA Trigger: AGCCGTCCAGGTTCCATAGCAGACAAAAGGAAGAAT...TAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | CTGGGAAGGCTAGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGGACTACTTTGCCTTaGTTCCCAGCATCCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LGRLAPTQSILTRRKAALWTTLP*FPASLP Trigger: AGGCAAGGATGCTGGGAAGCAAGGCAAAGTAGTCCA...CAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCTAGCCTTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | AAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGTGGTCCTTGGTTCTaGCAATGTATCGGTAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: KEQRGLLAPISKHQDLSLGGPWF*QCIGNA Trigger: CGCATTACCGATACATTGGCAGAACCAAGGACCACC...CAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGCAGGGACAATGCCATCTaGTCTAGGAAATTCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPSCSHLQTSGPIPGKASRDNAI*SRKFRF Trigger: AAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCT...GCTAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | CCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCATCCTTTTGTCTGCTATaGAACCTGGACGGCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PTQSILTRRKAALCLSSPSFCLL*NLDGSF Trigger: GAATGAGCCGTCCAGGTTCCATAGCAGACAAAAGGA...TGGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCAGTCTTCATCAGAGATaGGCTCTACCACTACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: STYPVYPDKKKSCTVPELSLHQR*ALPLLG Trigger: GCCCAGTAGTGGTAGAGCCCATCTCTGATGAAGACT...GAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | AAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTATCATGGTCCCTCGGTaGTCCTTGGTTCTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: KRTEGPSCSHLQTSGPIPIMVPR*SLVLPM Trigger: CATTGGCAGAACCAAGGACCACCGAGGGACCATGAT...AGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATATCATGGTCCCTCGGTaGTCCTTGGTTCTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: REKNRGAFLLPSPNIRTYIMVPR*SLVLPM Trigger: CATTGGCAGAACCAAGGACCACCGAGGGACCATGAT...ATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCTCCACTGGATCTCAGTaGGTTTCCTGTCCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: STYPVYPDKKKSCTVPELSTGSQ*VSCPQD Trigger: ATCCTGTGGACAGGAAACCCACTGAGATCCAGTGGA...GAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGTCCACTGGATCTCAGTaGGTTTCCTGTCCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KEQRGLLAPISKHQDLSLSTGSQ*VSCPQD Trigger: ATCCTGTGGACAGGAAACCCACTGAGATCCAGTGGA...CAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGCATCAGTAAATCTCCACTaGATCTCAGTGGGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLLAPISKHQDLSLGRLASVNLH*ISVGFL Trigger: CAGGAAACCCACTGAGATCCAGTGGAGATTTACTGA...TGCTAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTATCAGTAAATCTCCACTaGATCTCAGTGGGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGLLAPISKHQDLSLGRLSVNLH*ISVGFL Trigger: CAGGAAACCCACTGAGATCCAGTGGAGATTTACTGA...TAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCACTGATGTGTCCTTaGGGCCATCAGTCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: STYPVYPDKKKSCTVPELPLMCP*GHQSMF Trigger: AAACATGGACTGATGGCCCCAAGGACACATCAGTGG...GAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGCCACTGATGTGTCCTTaGGGCCATCAGTCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KEQRGLLAPISKHQDLSLPLMCP*GHQSMF Trigger: AAACATGGACTGATGGCCCCAAGGACACATCAGTGG...CAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTAATCTTCGAGTCTCCTaGATCCCCATGGCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: IGKRTEGPSCSHLQTSGPNLRVS*IPMASI Trigger: GATGGAGGCCATGGGGATCCAGGAGACTCGAAGATT...AGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | AGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATAATCTTCGAGTCTCCTaGATCCCCATGGCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: REKNRGAFLLPSPNIRTYNLRVS*IPMASI Trigger: GATGGAGGCCATGGGGATCCAGGAGACTCGAAGATT...ATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR GCA 90 bp | ACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCTCTCCACAGAATAGGTaGCAGTCTTCATCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TYPVYPDKKKSCTVPELPSPQNR*QSSSEM Trigger: CATCTCTGATGAAGACTGGCACCTATTCTGTGGAGA...GGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | ATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTTGGACTACTTTGCCTTaGTTCCCAGCATCCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IGKRTEGPSCSHLQTSGPWTTLP*FPASLP Trigger: AGGCAAGGATGCTGGGAAGCAAGGCAAAGTAGTCCA...AGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATAGTCTTCATCAGAGATaGGCTCTACCACTACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: REKNRGAFLLPSPNIRTYSLHQR*ALPLLG Trigger: GCCCAGTAGTGGTAGAGCCCATCTCTGATGAAGACT...ATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTCCACTGATGTGTCCTTaGGGCCATCAGTCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IGKRTEGPSCSHLQTSGPPLMCP*GHQSMF Trigger: AAACATGGACTGATGGCCCCAAGGACACATCAGTGG...AGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | AGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCTCTCCACAGAATAGGTaGCAGTCTTCATCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: STYPVYPDKKKSCTVPELSPQNR*QSSSEM Trigger: CATCTCTGATGAAGACTGGCACCTATTCTGTGGAGA...GAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | CTGGGAAGGCTAGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTCTCCACAGAATAGGTaGCAGTCTTCATCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGRLAPTQSILTRRKAALSPQNR*QSSSEM Trigger: CATCTCTGATGAAGACTGGCACCTATTCTGTGGAGA...CAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCTAGCCTTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR TCA 90 bp | ATTTCTGTAAATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACCAGGATCCACTAGCTTaGCCTGGTGATGAAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVNREKNRGAFLLPSPNQDPLA*PGDEAR Trigger: CCTTGCTTCATCACCAGGTCAAGCTAGTGGATCCTG...GTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTATTTACAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | AGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCAGGGACAATGCCATCTaGTCTAGGAAATTCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: STYPVYPDKKKSCTVPELRDNAI*SRKFRF Trigger: AAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCT...GAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | TCTGTAAATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCTCCACTGGATCTCAGTaGGTTTCCTGTCCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVNREKNRGAFLLPSPNISTGSQ*VSCPQD Trigger: ATCCTGTGGACAGGAAACCCACTGAGATCCAGTGGA...GATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTATTTACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | ATTTCTGTAAATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACGGTGGTCCTTGGTTCTaGCAATGTATCGGTAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: ISVNREKNRGAFLLPSPNGGPWF*QCIGNA Trigger: CGCATTACCGATACATTGGCAGAACCAAGGACCACC...GTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTATTTACAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | GGGGTAGTGTGGACAACGGCTGCTCTCAAGTCTCTTTATTGGTGTTTTAGAAAAAGTCTTCATCAGAGATaGGCTCTACCACTACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVVWTTAALKSLYWCFRKSLHQR*ALPLLG Trigger: GCCCAGTAGTGGTAGAGCCCATCTCTGATGAAGACT...TTTTCTAAAACACCAATAAAGAGACTTGAGAGCAGCCGTTGTCCACACTACCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| 3UTR CAA 72 bp | ATTTCTGTAAATAGGGAAAAGAACAGAGGGGCCTTCTaGCTCCCATCTCCAAACATCAGGACCTATCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVNREKNRGAF*LPSPNIRTYPW Trigger: CCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTATTTACAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | TCTGTAAATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCATTCTTCCTTTTGTCTaGTATGGAACCTGGACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVNREKNRGAFLLPSPNIILPFV*YGTWTA Trigger: AGCCGTCCAGGTTCCATAGCAGACAAAAGGAAGAAT...GATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTATTTACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | GGGGTAGTGTGGACAACGGCTGCTCTCAAGTCTCTTTATTGGTGTTTTAGAAAAATTCTTCCTTTTGTCTaGTATGGAACCTGGACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVVWTTAALKSLYWCFRKILPFV*YGTWTA Trigger: AGCCGTCCAGGTTCCATAGCAGACAAAAGGAAGAAT...TTTTCTAAAACACCAATAAAGAGACTTGAGAGCAGCCGTTGTCCACACTACCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR GCA 90 bp | ATTTCTGTAAATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACTCTCCACAGAATAGGTaGCAGTCTTCATCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ISVNREKNRGAFLLPSPNSPQNR*QSSSEM Trigger: CATCTCTGATGAAGACTGGCACCTATTCTGTGGAGA...GTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTATTTACAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CCA 90 bp | ATTTCTGTAAATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACTCAGTAAATCTCCACTaGATCTCAGTGGGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVNREKNRGAFLLPSPNSVNLH*ISVGFL Trigger: CAGGAAACCCACTGAGATCCAGTGGAGATTTACTGA...GTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTATTTACAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTAGTGTGGACAACGGCTGCTCTCAAGTCTCTTTATTGGTGTTTTAGAAAAAGGGACAATGCCATCTaGTCTAGGAAATTCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVVWTTAALKSLYWCFRKRDNAI*SRKFRF Trigger: AAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCT...TTTTCTAAAACACCAATAAAGAGACTTGAGAGCAGCCGTTGTCCACACTACCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGTAAATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACAGGGACAATGCCATCTaGTCTAGGAAATTCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISVNREKNRGAFLLPSPNRDNAI*SRKFRF Trigger: AAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCT...GTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTATTTACAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS CCA 90 bp | CTGGGCGCCGCCTGCTCCATGGAGGATTCTTCCTTTTGTCTGCTATaGAACCTGGACGGCTCATTCCATAGCGGTAGAAGGGGGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGAACSMEDSSFCLL*NLDGSFHSGRRGRK Trigger: CTTCCTCCCCCTTCTACCGCTATGGAATGAGCCGTCCAGGTTCCATAGCAGACAAAAGGAAGAATCCTCCATGGAGCAGGCGGCGCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 ENSMUST00000137775.2 |
||
| CDS GCA 90 bp | CACTACTGGGCGCCGCCTGCTCCATGGAGGATTCTTCCTTTTGTCTaGTATGGAACCTGGACGGCTCATTCCATAGCGGTAGAAGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HYWAPPAPWRILPFV*YGTWTAHSIAVEGG Trigger: TCCCCCTTCTACCGCTATGGAATGAGCCGTCCAGGTTCCATAGCAGACAAAAGGAAGAATCCTCCATGGAGCAGGCGGCGCCCAGTAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 ENSMUST00000137775.2 |
||
| CDS GCA 90 bp | GCCAGTCTTCATCAGAGATGGGCTCTACCACTACTGGGCGCCGCCTaGTCCATGGAGGATTCTTCCTTTTGTCTGCTATGGAACCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ASLHQRWALPLLGAA*SMEDSSFCLLWNLD Trigger: GTCCAGGTTCCATAGCAGACAAAAGGAAGAATCCTCCATGGAGCAGGCGGCGCCCAGTAGTGGTAGAGCCCATCTCTGATGAAGACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 ENSMUST00000137775.2 |
||
| CDS-3UTR CAA 90 bp | ACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCGTCCCTCGGTGGTCCTaGGTTCTGCCAATGTATCGG | + |
|
Preference number: 5 (lower is better) Translates to: TYPVYPDKKKSCTVPELPVPRWS*VLPMYR Trigger: CCGATACATTGGCAGAACCAAGGACCACCGAGGGAC...GGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS CCA 90 bp | CCGCCTGCTCCATGGAGGATTCTTCCTTTTGTCTGCTATGGAACCTaGACGGCTCATTCCATAGCGGTAGAAGGGGGAGGAAGTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PPAPWRILPFVCYGT*TAHSIAVEGGGSGF Trigger: AAAGCCACTTCCTCCCCCTTCTACCGCTATGGAATGAGCCGTCCAGGTTCCATAGCAGACAAAAGGAAGAATCCTCCATGGAGCAGGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 ENSMUST00000137775.2 |
||
| CDS CCA 90 bp | TTCATCAGAGATGGGCTCTACCACTACTGGGCGCCGCCTGCTCCATaGAGGATTCTTCCTTTTGTCTGCTATGGAACCTGGACGGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FIRDGLYHYWAPPAP*RILPFVCYGTWTAH Trigger: ATGAGCCGTCCAGGTTCCATAGCAGACAAAAGGAAGAATCCTCCATGGAGCAGGCGGCGCCCAGTAGTGGTAGAGCCCATCTCTGATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 ENSMUST00000137775.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGTCCCTCGGTGGTCCTaGGTTCTGCCAATGTATCGG | + |
|
Preference number: 5 (lower is better) Translates to: KEQRGLLAPISKHQDLSLVPRWS*VLPMYR Trigger: CCGATACATTGGCAGAACCAAGGACCACCGAGGGAC...CAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
||
| CDS CCA 90 bp | TTTCTACCATGTCTCCACAGAATAGGTGCCAGTCTTCATCAGAGATaGGCTCTACCACTACTGGGCGCCGCCTGCTCCATGGAGGATTCT | + |
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Preference number: 5 (lower is better) Translates to: FLPCLHRIGASLHQR*ALPLLGAACSMEDS Trigger: AGAATCCTCCATGGAGCAGGCGGCGCCCAGTAGTGGTAGAGCCCATCTCTGATGAAGACTGGCACCTATTCTGTGGAGACATGGTAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS GCA 90 bp | GCATCCTTGCCTTCTAAGATTTCTACCATGTCTCCACAGAATAGGTaGCAGTCTTCATCAGAGATGGGCTCTACCACTACTGGGCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: ASLPSKISTMSPQNR*QSSSEMGSTTTGRR Trigger: GCGGCGCCCAGTAGTGGTAGAGCCCATCTCTGATGAAGACTGGCACCTATTCTGTGGAGACATGGTAGAAATCTTAGAAGGCAAGGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CAA 90 bp | AGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGGAGGATTCTTCCTTTaGTCTGCTATGGAACCTGGA | + |
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Preference number: 5 (lower is better) Translates to: RGLLAPISKHQDLSLGRLGGFFL*SAMEPG Trigger: TCCAGGTTCCATAGCAGACAAAAGGAAGAATCCTCC...TAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CAA 90 bp | GGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGCAGGAGGATTCTTCCTTTaGTCTGCTATGGAACCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GLLAPISKHQDLSLGRLAGGFFL*SAMEPG Trigger: TCCAGGTTCCATAGCAGACAAAAGGAAGAATCCTCC...TGCTAGCCTTCCCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS CCA 90 bp | CTTGTAGAGACTCGAACACGTTCTCCTGCCTCAGTAAATCTCCACTaGATCTCAGTGGGTTTCCTGTCCACAGGATCCACTAGCTTGACC | + |
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Preference number: 5 (lower is better) Translates to: LVETRTRSPASVNLH*ISVGFLSTGSTSLT Trigger: GGTCAAGCTAGTGGATCCTGTGGACAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGGAGAACGTGTTCGAGTCTCTACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS GCA 90 bp | AGGACAACCCAGTTTCGCTGCCGAACGACTTGGACTACTTTGCCTTaGTTCCCAGCATCCTTGCCTTCTAAGATTTCTACCATGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RTTQFRCRTTWTTLP*FPASLPSKISTMSP Trigger: TGGAGACATGGTAGAAATCTTAGAAGGCAAGGATGCTGGGAAGCAAGGCAAAGTAGTCCAAGTCGTTCGGCAGCGAAACTGGGTTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS GCA 90 bp | GGGGATAATTCTGCCAGATCTTGTAGAGACTCGAACACGTTCTCCTaGCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: GDNSARSCRDSNTFS*LSKSPLDLSGFPVH Trigger: GTGGACAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGGAGAACGTGTTCGAGTCTCTACAAGATCTGGCAGAATTATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CAA 90 bp | ATAGGGAAAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTGGAGGATTCTTCCTTTaGTCTGCTATGGAACCTGGA | + |
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Preference number: 5 (lower is better) Translates to: IGKRTEGPSCSHLQTSGPGGFFL*SAMEPG Trigger: TCCAGGTTCCATAGCAGACAAAAGGAAGAATCCTCC...AGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTTTCCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CAA 90 bp | CCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCCCACTAGGAAATTCAGGTTaGGGGATAATTCTGCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: PTQSILTRRKAALCLSSPLGNSG*GIILPD Trigger: ATCTGGCAGAATTATCCCCAAACCTGAATTTCCTAG...TGGGGAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CAA 90 bp | AAAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGCTAGGAAATTCAGGTTaGGGGATAATTCTGCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: KEQRGLLAPISKHQDLSLLGNSG*GIILPD Trigger: ATCTGGCAGAATTATCCCCAAACCTGAATTTCCTAG...CAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS-3UTR CAA 90 bp | AGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCCTAGGAAATTCAGGTTaGGGGATAATTCTGCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: STYPVYPDKKKSCTVPELLGNSG*GIILPD Trigger: ATCTGGCAGAATTATCCCCAAACCTGAATTTCCTAG...GAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS CCA 72 bp | GATGGGCTCTACCACTACTGGGCGCCGCCTGCTCCATaGAGGATTCTTCCTTTTGTCTGCTATGGAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: DGLYHYWAPPAP*RILPFVCYGTW Trigger: CCAGGTTCCATAGCAGACAAAAGGAAGAATCCTCCATGGAGCAGGCGGCGCCCAGTAGTGGTAGAGCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 ENSMUST00000137775.2 |
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| CDS CCA 72 bp | TGTCTCCACAGAATAGGTGCCAGTCTTCATCAGAGATaGGCTCTACCACTACTGGGCGCCGCCTGCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: CLHRIGASLHQR*ALPLLGAACSM Trigger: CATGGAGCAGGCGGCGCCCAGTAGTGGTAGAGCCCATCTCTGATGAAGACTGGCACCTATTCTGTGGAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 ENSMUST00000137775.2 |
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| CDS GCA 72 bp | CATCAGAGATGGGCTCTACCACTACTGGGCGCCGCCTaGTCCATGGAGGATTCTTCCTTTTGTCTGCTATGG | + |
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Preference number: 6 (lower is better) Translates to: HQRWALPLLGAA*SMEDSSFCLLW Trigger: CCATAGCAGACAAAAGGAAGAATCCTCCATGGAGCAGGCGGCGCCCAGTAGTGGTAGAGCCCATCTCTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 ENSMUST00000137775.2 |
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| CDS GCA 72 bp | TGCGTGTTCAACCCCTCCAGGACAACCCAGTTTCGCTaGCGAACGACTTGGACTACTTTGCCTTGCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: CVFNPSRTTQFR*RTTWTTLPCFP Trigger: TGGGAAGCAAGGCAAAGTAGTCCAAGTCGTTCGGCAGCGAAACTGGGTTGTCCTGGAGGGGTTGAACACGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS CCA 72 bp | GTGCCAGTCTTCATCAGAGATGGGCTCTACCACTACTaGGCGCCGCCTGCTCCATGGAGGATTCTTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: VPVFIRDGLYHY*APPAPWRILPF Trigger: AAAAGGAAGAATCCTCCATGGAGCAGGCGGCGCCCAGTAGTGGTAGAGCCCATCTCTGATGAAGACTGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 ENSMUST00000137775.2 |
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| CDS CCA 72 bp | CCATGGAGGATTCTTCCTTTTGTCTGCTATGGAACCTaGACGGCTCATTCCATAGCGGTAGAAGGGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: PWRILPFVCYGT*TAHSIAVEGGG Trigger: TCCTCCCCCTTCTACCGCTATGGAATGAGCCGTCCAGGTTCCATAGCAGACAAAAGGAAGAATCCTCCATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 ENSMUST00000137775.2 |
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| CDS CCA 72 bp | GCCTGCTCCATGGAGGATTCTTCCTTTTGTCTGCTATaGAACCTGGACGGCTCATTCCATAGCGGTAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: ACSMEDSSFCLL*NLDGSFHSGRR Trigger: CCTTCTACCGCTATGGAATGAGCCGTCCAGGTTCCATAGCAGACAAAAGGAAGAATCCTCCATGGAGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 ENSMUST00000137775.2 |
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| CDS CAA 90 bp | CCCTCCAGGACAACCCAGTTTCGCTGCCGAACGACTTGGACTACTTaGCCTTGCTTCCCAGCATCCTTGCCTTCTAAGATTTCTACCATG | + |
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Preference number: 6 (lower is better) Translates to: PSRTTQFRCRTTWTT*PCFPASLPSKISTM Trigger: CATGGTAGAAATCTTAGAAGGCAAGGATGCTGGGAAGCAAGGCAAAGTAGTCCAAGTCGTTCGGCAGCGAAACTGGGTTGTCCTGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS TCA 72 bp | TCGGGGCACATAAGTTCTTTCAAGAGCATCTTCCACTaGTGTGTCCTTGGGGCCATCAGTCCATGTTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SGHISSFKSIFH*CVLGAISPCFR Trigger: CCTGAAACATGGACTGATGGCCCCAAGGACACATCAGTGGAAGATGCTCTTGAAAGAACTTATGTGCCCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS GCA 72 bp | CAGTTTCGCTGCCGAACGACTTGGACTACTTTGCCTTaGTTCCCAGCATCCTTGCCTTCTAAGATTTCTACC | + |
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Preference number: 6 (lower is better) Translates to: QFRCRTTWTTLP*FPASLPSKIST Trigger: GGTAGAAATCTTAGAAGGCAAGGATGCTGGGAAGCAAGGCAAAGTAGTCCAAGTCGTTCGGCAGCGAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS CAA 90 bp | GTCCATGTTTCAGGGACAATGCCATCTGCTCTAGGAAATTCAGGTTaGGGGATAATTCTGCCAGATCTTGTAGAGACTCGAACACGTTCT | + |
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Preference number: 6 (lower is better) Translates to: VHVSGTMPSALGNSG*GIILPDLVETRTRS Trigger: AGAACGTGTTCGAGTCTCTACAAGATCTGGCAGAATTATCCCCAAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCTGAAACATGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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| CDS GCA 72 bp | CCTTCTAAGATTTCTACCATGTCTCCACAGAATAGGTaGCAGTCTTCATCAGAGATGGGCTCTACCACTACT | + |
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Preference number: 6 (lower is better) Translates to: PSKISTMSPQNR*QSSSEMGSTTT Trigger: AGTAGTGGTAGAGCCCATCTCTGATGAAGACTGGCACCTATTCTGTGGAGACATGGTAGAAATCTTAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019854.13 ENSMUST00000119968.8 ENSMUST00000121048.2 ENSMUST00000121920.8 |
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