Pregenerated sensors for MRPL23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037772Ensembl transcript IDs: ENSMUST00000038675.7, ENSMUST00000210662.2, ENSMUST00000210803.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCCTGCTGTCCTCTTCCAGAGGTTCTaGAGAACGGGGGTCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GLVRTTVLTRVCGPNPAVLFQRF*RTGVLL Trigger: GAGAAGGACCCCCGTTCTCCAGAACCTCTGGAAGAG...GACAGCAGGATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR TCA 90 bp | TTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCCTGCTGCCAGGCCGCACCAGCTaGATGAAGAAGTTAGTTCGA | + |
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Preference number: 4 (lower is better) Translates to: LGLSEPLCSLGSVVQILLPGRTS*MKKLVR Trigger: TCGAACTAACTTCTTCATTCAGCTGGTGCGGCCTGG...CAGCAGGATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 |
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| CDS-3UTR CCA 90 bp | GGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCCTGCTGTCACGGGGGTCCTTCTCTaGAAAAAGATCTGGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: GLVRTTVLTRVCGPNPAVTGVLL*KKIWES Trigger: ACTTTCCCAGATCTTTTTCCAGAGAAGGACCCCCGT...GACAGCAGGATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR CCA 90 bp | CTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCCTGCTGTCATACTGCTTTGCCTCTGCTaGGGTAGCTCCTCTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LVRTTVLTRVCGPNPAVILLCLC*GSSSSR Trigger: TCTGGAAGAGGAGCTACCCCAGCAGAGGCAAAGCAG...TATGACAGCAGGATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR TCA 90 bp | TATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCCTGCCAGGCCGCACCAGCTaGATGAAGAAGTTAGTTCGA | + |
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Preference number: 4 (lower is better) Translates to: YLGLSEPLCSLGSVVQILPGRTS*MKKLVR Trigger: TCGAACTAACTTCTTCATTCAGCTGGTGCGGCCTGG...CAGGATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 |
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| CDS-3UTR GCA 90 bp | GAATTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCATCGCTGCTTTGCCTCTaGTGGGGTAGCTCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: EFLFGLVRTTVLTRVCGPSLLCL*WGSSSS Trigger: GGAAGAGGAGCTACCCCAGCAGAGGCAAAGCAGCGA...TGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR CCA 90 bp | TTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCCTCTGCTTTGCCTCTGCTaGGGTAGCTCCTCTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LFGLVRTTVLTRVCGPNPLLCLC*GSSSSR Trigger: TCTGGAAGAGGAGCTACCCCAGCAGAGGCAAAGCAG...AGGATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR CCA 90 bp | TTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCCTCTTCCAGAGGTTCTaGAGAACGGGGGTCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FYLGLSEPLCSLGSVVQILFQRF*RTGVLL Trigger: GAGAAGGACCCCCGTTCTCCAGAACCTCTGGAAGAG...GATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR TCA 90 bp | GAATTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAAAGATCTGGGAAAGTaGAGGTCTGCCCATGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: EFLFGLVRTTVLTRVCGPKDLGK*RSAHGP Trigger: TGGCCCATGGGCAGACCTTCACTTTCCCAGATCTTT...TGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR GCA 90 bp | GAATTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAATGGGGATCCGGAACTaGACGGTATCTTCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EFLFGLVRTTVLTRVCGPMGIRN*TVSSGC Trigger: ACAGCCTGAAGATACCGTGCAGTTCCGGATCCCCAT...TGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 |
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| CDS-3UTR GCA 90 bp | TTCTCCACAAAGAATTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCGCTGCTTTGCCTCTaGTGGGGTAGCTCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: FSTKNFYLGLSEPLCSLGSLLCL*WGSSSS Trigger: GGAAGAGGAGCTACCCCAGCAGAGGCAAAGCAGCGA...CCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAATTCTTTGTGGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR CCA 90 bp | CTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCCTGCTGTCATACTCTGGAAAAAGATCTaGGAAAGTGAAGGTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LVRTTVLTRVCGPNPAVILWKKI*ESEGLP Trigger: GGGCAGACCTTCACTTTCCCAGATCTTTTTCCAGAG...TATGACAGCAGGATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR CCA 90 bp | TTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCCTGCTGGCCACTTTGTAGTCTaGTTTCTTGATCCTCACATT | + |
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Preference number: 4 (lower is better) Translates to: FGLVRTTVLTRVCGPNPAGHFVV*FLDPHI Trigger: AATGTGAGGATCAAGAAACCAGACTACAAAGTGGCC...AGCAGGATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR TCA 90 bp | TTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCCTGCTTGTAGTCTGGTTTCTTaGTCCTCACATTCTTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FGLVRTTVLTRVCGPNPACSLVS*SSHSCD Trigger: ATCACAAGAATGTGAGGATCAAGAAACCAGACTACA...AGCAGGATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR GCA 90 bp | TTCTCCACAAAGAATTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGATGGGGATCCGGAACTaGACGGTATCTTCAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FSTKNFYLGLSEPLCSLGMGIRN*TVSSGC Trigger: ACAGCCTGAAGATACCGTGCAGTTCCGGATCCCCAT...CCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAATTCTTTGTGGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCCACAAAGAATTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGCTCTTCCAGAGGTTCTaGAGAACGGGGGTCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FLHKEFLFGLVRTTVLTRLFQRF*RTGVLL Trigger: GAGAAGGACCCCCGTTCTCCAGAACCTCTGGAAGAG...CCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAATTCTTTGTGGAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR TCA 90 bp | TTTCTCCACAAAGAATTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGAAAGATCTGGGAAAGTaGAGGTCTGCCCATGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FLHKEFLFGLVRTTVLTRKDLGK*RSAHGP Trigger: TGGCCCATGGGCAGACCTTCACTTTCCCAGATCTTT...CCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAATTCTTTGTGGAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR CCA 90 bp | TTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCTCTGGAAAAAGATCTaGGAAAGTGAAGGTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: FLFGLVRTTVLTRVCGPNLWKKI*ESEGLP Trigger: GGGCAGACCTTCACTTTCCCAGATCTTTTTCCAGAG...ATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR TCA 90 bp | TCTTTCTCCACAAAGAATTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAAAAGATCTGGGAAAGTaGAGGTCTGCCCATGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFSTKNFYLGLSEPLCSLKDLGK*RSAHGP Trigger: TGGCCCATGGGCAGACCTTCACTTTCCCAGATCTTT...TAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAATTCTTTGTGGAGAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR CCA 90 bp | GAATTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAGGCCACTTTGTAGTCTaGTTTCTTGATCCTCACATT | + |
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Preference number: 4 (lower is better) Translates to: EFLFGLVRTTVLTRVCGPGHFVV*FLDPHI Trigger: AATGTGAGGATCAAGAAACCAGACTACAAAGTGGCC...TGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR TCA 90 bp | TTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCTGTAGTCTGGTTTCTTaGTCCTCACATTCTTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: FYLGLSEPLCSLGSVVQICSLVS*SSHSCD Trigger: ATCACAAGAATGTGAGGATCAAGAAACCAGACTACA...GATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR CCA 90 bp | TTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATGGCCACTTTGTAGTCTaGTTTCTTGATCCTCACATT | + |
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Preference number: 4 (lower is better) Translates to: FLFGLVRTTVLTRVCGPNGHFVV*FLDPHI Trigger: AATGTGAGGATCAAGAAACCAGACTACAAAGTGGCC...ATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR TCA 90 bp | AATTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAATGTAGTCTGGTTTCTTaGTCCTCACATTCTTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: NFYLGLSEPLCSLGSVVQCSLVS*SSHSCD Trigger: ATCACAAGAATGTGAGGATCAAGAAACCAGACTACA...TTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR CCA 90 bp | TCTTTCTCCACAAAGAATTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTAACGGGGGTCCTTCTCTaGAAAAAGATCTGGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: SFSTKNFYLGLSEPLCSLTGVLL*KKIWES Trigger: ACTTTCCCAGATCTTTTTCCAGAGAAGGACCCCCGT...TAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAATTCTTTGTGGAGAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS CCA 90 bp | TTCCAGAGGTTCTGGAGAACGGGGGTCCTTCTCTGGAAAAAGATCTaGGAAAGTGAAGGTCTGCCCATGGGCCAGCTGCACGTAGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: FQRFWRTGVLLWKKI*ESEGLPMGQLHVGH Trigger: GTGGCCTACGTGCAGCTGGCCCATGGGCAGACCTTCACTTTCCCAGATCTTTTTCCAGAGAAGGACCCCCGTTCTCCAGAACCTCTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS TCA 90 bp | AACTGCACGGTATCTTCAGGCTGTGCAGTACCAGGCCGCACCAGCTaGATGAAGAAGTTAGTTCGAAATACACGGAGCTGGGGGCCACCC | + |
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Preference number: 5 (lower is better) Translates to: NCTVSSGCAVPGRTS*MKKLVRNTRSWGPP Trigger: GGGTGGCCCCCAGCTCCGTGTATTTCGAACTAACTTCTTCATTCAGCTGGTGCGGCCTGGTACTGCACAGCCTGAAGATACCGTGCAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 |
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| CDS GCA 90 bp | CATTCTTGTGATCCCTCCTCCTGTTGGAGCCATGCTGCACCCGTGTaGGCACGGCAGCCACGGGAACATTGTAAATCTGCTCAAGGTAAT | + |
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Preference number: 5 (lower is better) Translates to: HSCDPSSCWSHAAPV*ARQPREHCKSAQGN Trigger: ATTACCTTGAGCAGATTTACAATGTTCCCGTGGCTGCCGTGCGCACACGGGTGCAGCATGGCTCCAACAGGAGGAGGGATCACAAGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS GCA 90 bp | GGTCATCTCCATGGGGATCCGGAACTGCACGGTATCTTCAGGCTGTaGAGTACCAGGCCGCACCAGCTGAATGAAGAAGTTAGTTCGAAA | + |
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Preference number: 5 (lower is better) Translates to: GHLHGDPELHGIFRL*STRPHQLNEEVSSK Trigger: TTTCGAACTAACTTCTTCATTCAGCTGGTGCGGCCTGGTACTGCACAGCCTGAAGATACCGTGCAGTTCCGGATCCCCATGGAGATGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 |
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| CDS CCA 90 bp | GAAGGTCTGCCCATGGGCCAGCTGCACGTAGGCCACTTTGTAGTCTaGTTTCTTGATCCTCACATTCTTGTGATCCCTCCTCCTGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: EGLPMGQLHVGHFVV*FLDPHILVIPPPVG Trigger: TCCAACAGGAGGAGGGATCACAAGAATGTGAGGATCAAGAAACCAGACTACAAAGTGGCCTACGTGCAGCTGGCCCATGGGCAGACCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS-3UTR CAA 90 bp | TTATTTGGGCTTGTCAGAACCACTGTGCTCACTAGGGTCTGTGGTCCAAATCCTCTGGGGGCCACCCAGTaGGTAAAGGGGGTACAACAC | + |
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Preference number: 5 (lower is better) Translates to: LFGLVRTTVLTRVCGPNPLGATQ*VKGVQH Trigger: GTGTTGTACCCCCTTTACCAACTGGGTGGCCCCCAG...AGGATTTGGACCACAGACCCTAGTGAGCACAGTGGTTCTGACAAGCCCAAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038675.7 |
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| CDS-3UTR CAA 90 bp | TCTTTCTCCACAAAGAATTTTTATTTGGGCTTGTCAGAACCACTGTGCTCACTACTGGGGGCCACCCAGTaGGTAAAGGGGGTACCTAAT | + |
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Preference number: 5 (lower is better) Translates to: SFSTKNFYLGLSEPLCSLLGATQ*VKGVPN Trigger: ATTAGGTACCCCCTTTACCAACTGGGTGGCCCCCAG...TAGTGAGCACAGTGGTTCTGACAAGCCCAAATAAAAATTCTTTGTGGAGAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000210662.2 |
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| CDS GCA 72 bp | AGGTCCACCCTGGTCATCTCCATGGGGATCCGGAACTaGACGGTATCTTCAGGCTGTGCAGTACCAGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RSTLVISMGIRN*TVSSGCAVPGR Trigger: GCGGCCTGGTACTGCACAGCCTGAAGATACCGTGCAGTTCCGGATCCCCATGGAGATGACCAGGGTGGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 |
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| CDS GCA 72 bp | GATCCCTCCTCCTGTTGGAGCCATGCTGCACCCGTGTaGGCACGGCAGCCACGGGAACATTGTAAATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: DPSSCWSHAAPV*ARQPREHCKSA Trigger: AGCAGATTTACAATGTTCCCGTGGCTGCCGTGCGCACACGGGTGCAGCATGGCTCCAACAGGAGGAGGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS GCA 72 bp | CAAACCAGGAAGGGATACCAGGGCACCTCAGGTCGCTaGTTTGCCTCTGCTGGGGTAGCTCCTCTTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: QTRKGYQGTSGR*FASAGVAPLPE Trigger: CTCTGGAAGAGGAGCTACCCCAGCAGAGGCAAAGCAGCGACCTGAGGTGCCCTGGTATCCCTTCCTGGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS TCA 72 bp | AACGGGGGTCCTTCTCTGGAAAAAGATCTGGGAAAGTaGAGGTCTGCCCATGGGCCAGCTGCACGTAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: NGGPSLEKDLGK*RSAHGPAARRP Trigger: TGGCCTACGTGCAGCTGGCCCATGGGCAGACCTTCACTTTCCCAGATCTTTTTCCAGAGAAGGACCCCCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS GCA 72 bp | CATGGGGATCCGGAACTGCACGGTATCTTCAGGCTGTaGAGTACCAGGCCGCACCAGCTGAATGAAGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: HGDPELHGIFRL*STRPHQLNEEV Trigger: AACTTCTTCATTCAGCTGGTGCGGCCTGGTACTGCACAGCCTGAAGATACCGTGCAGTTCCGGATCCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 |
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| CDS CCA 72 bp | TTCTGGAGAACGGGGGTCCTTCTCTGGAAAAAGATCTaGGAAAGTGAAGGTCTGCCCATGGGCCAGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: FWRTGVLLWKKI*ESEGLPMGQLH Trigger: GTGCAGCTGGCCCATGGGCAGACCTTCACTTTCCCAGATCTTTTTCCAGAGAAGGACCCCCGTTCTCCAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS CCA 72 bp | CCCATGGGCCAGCTGCACGTAGGCCACTTTGTAGTCTaGTTTCTTGATCCTCACATTCTTGTGATCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PMGQLHVGHFVV*FLDPHILVIPP Trigger: AGGAGGGATCACAAGAATGTGAGGATCAAGAAACCAGACTACAAAGTGGCCTACGTGCAGCTGGCCCATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 ENSMUST00000210803.2 |
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| CDS TCA 72 bp | GTATCTTCAGGCTGTGCAGTACCAGGCCGCACCAGCTaGATGAAGAAGTTAGTTCGAAATACACGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VSSGCAVPGRTS*MKKLVRNTRSW Trigger: CCAGCTCCGTGTATTTCGAACTAACTTCTTCATTCAGCTGGTGCGGCCTGGTACTGCACAGCCTGAAGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038675.7 ENSMUST00000210662.2 |
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| CDS CAA 72 bp | GTTAGTTCGAAATACACGGAGCTGGGGGCCACCCAGTaGGTAAAGGGGGTACCTAATGGTCAAATTAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: VSSKYTELGATQ*VKGVPNGQIRG Trigger: ACCTCTAATTTGACCATTAGGTACCCCCTTTACCAACTGGGTGGCCCCCAGCTCCGTGTATTTCGAACTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210662.2 |
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| CDS CAA 90 bp | AATGAAGAAGTTAGTTCGAAATACACGGAGCTGGGGGCCACCCAGTaGGTAAAGGGGGTACCTAATGGTCAAATTAGAGGTCTGGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: NEEVSSKYTELGATQ*VKGVPNGQIRGLAF Trigger: AAAGGCCAGACCTCTAATTTGACCATTAGGTACCCCCTTTACCAACTGGGTGGCCCCCAGCTCCGTGTATTTCGAACTAACTTCTTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210662.2 |
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