Pregenerated sensors for MRPL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002767Ensembl transcript IDs: ENSMUST00000002844.14, ENSMUST00000113429.8, ENSMUST00000113430.2
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTaGCCCAGCCAGCGGTTCCTTCCTGCCTTGCCGATGACCCGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PAQPPLRCHSPLLGL*PSQRFLPALPMTRW Trigger: CCAGCGGGTCATCGGCAAGGCAGGAAGGAACCGCTGGCTGGGCAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR CCA 90 bp | CTTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGCAGCTCGGATATACTaGGCTCCCCGGCCAGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LSAGPASLALPQPTVRPLAARIY*APRPGS Trigger: CGAGCCTGGCCGGGGAGCCCAGTATATCCGAGCTGC...AAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR GCA 90 bp | CTTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTCGCCCCAAGTGGATGTaGATCCCCCTCCTGCCATCC | + |
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Preference number: 4 (lower is better) Translates to: LSAGPASLALPQPTVRPLRPKWM*IPLLPS Trigger: GGATGGCAGGAGGGGGATGCACATCCACTTGGGGCG...AAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR CCA 90 bp | CTTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTAGGCAGCGCCCCAAGTaGATGTGCATCCCCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSAGPASLALPQPTVRPLRQRPK*MCIPLL Trigger: CAGGAGGGGGATGCACATCCACTTGGGGCGCTGCCT...AAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| 3UTR CAA 72 bp | CCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTaGCCCAGCCAGCGGTTCCTTCCTGCCTTGCCGATG | + |
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Preference number: 4 (lower is better) Translates to: PPLRCHSPLLGL*PSQRFLPALPM Trigger: CATCGGCAAGGCAGGAAGGAACCGCTGGCTGGGCAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR CCA 90 bp | TTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGCGGATGCGGCCTGTATaGTCTCGACCCCCAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: FRPAQPPLRCHSPLLGLLRMRPV*SRPPDF Trigger: GAAGTCTGGGGGTCGAGACCATACAGGCCGCATCCG...CAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR TCA 90 bp | TTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGAAGGCAGGGGGCAGCTaGAGGAGGACATTGCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: FRPAQPPLRCHSPLLGLLKAGGS*RRTLLC Trigger: ACAGAGCAATGTCCTCCTTCAGCTGCCCCCTGCCTT...CAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR GCA 90 bp | TTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGCACACCGCATGTCCCTaGAGCTCGGATATACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: FRPAQPPLRCHSPLLGLLHTACP*SSDILG Trigger: GCCCAGTATATCCGAGCTGCAGGGACATGCGGTGTG...CAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR TCA 90 bp | TTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGTGTTTTCCGTGGCAATaGTCCAGCGCTTCCGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: FRPAQPPLRCHSPLLGLLCFPWQ*SSASGY Trigger: GTAGCCGGAAGCGCTGGATCATTGCCACGGAAAACA...CAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR GCA 90 bp | TTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGGGCCTACAGTTGCAGTaGATGACTCCAGCACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FRPAQPPLRCHSPLLGLLGLQLQ*MTPAPA Trigger: TGCAGGTGCTGGAGTCATGCACTGCAACTGTAGGCC...CAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR CCA 90 bp | TTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGCTCTTCGAGGGCAGCTaGATAATGGCTGTCCCGTTC | + |
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Preference number: 4 (lower is better) Translates to: FRPAQPPLRCHSPLLGLLLFEGS*IMAVPF Trigger: GAACGGGACAGCCATTATCCAGCTGCCCTCGAAGAG...CAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR GCA 90 bp | TTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGGCTGAAGGAGGACATTaGTCTGTATCTGGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: FRPAQPPLRCHSPLLGLLAEGGH*SVSGQQ Trigger: CTGCTGCCCAGATACAGAGCAATGTCCTCCTTCAGC...CAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR GCA 90 bp | TTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGTGTGCATCCCCCTCCTaGCATCCTGCCTATGTGATT | + |
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Preference number: 4 (lower is better) Translates to: FRPAQPPLRCHSPLLGLLCASPS*HPAYVI Trigger: AATCACATAGGCAGGATGGCAGGAGGGGGATGCACA...CAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR TCA 90 bp | CTTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTTACAGTTGCAGTGCATaGCTCCAGCACCTGCATTTG | + |
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Preference number: 4 (lower is better) Translates to: LSAGPASLALPQPTVRPLYSCSA*LQHLHL Trigger: CAAATGCAGGTGCTGGAGTCATGCACTGCAACTGTA...AAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR GCA 90 bp | TTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGCTCAAACGGTTCTGGTaGCTTTTCCTTTTCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: FRPAQPPLRCHSPLLGLLLKRFW*LFLFWP Trigger: CGGCCAGAAAAGGAAAAGGCACCAGAACCGTTTGAG...CAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR CCA 90 bp | CTTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTCTCCTCAAACGGTTCTaGTGCCTTTTCCTTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSAGPASLALPQPTVRPLLLKRF*CLFLFW Trigger: CCAGAAAAGGAAAAGGCACCAGAACCGTTTGAGGAG...AAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR GCA 90 bp | CTTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTAACCAGAGCTATGTCTaGAGACCTACAAGGATCATA | + |
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Preference number: 4 (lower is better) Translates to: LSAGPASLALPQPTVRPLNQSYV*RPTRII Trigger: TATGATCCTTGTAGGTCTGCAGACATAGCTCTGGTT...AAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS GCA 90 bp | GGCAGCAGGGAGCAGAGTCGGAACCCGGGCGGTAATGGCCGCGGATaGCAGGCTCAAAGAGCGCAGAGCACTCGTCAGCGCACACAGCGC | + |
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Preference number: 5 (lower is better) Translates to: GSREQSRNPGGNGRG*QAQRAQSTRQRTQR Trigger: GCGCTGTGTGCGCTGACGAGTGCTCTGCGCTCTTTGAGCCTGGCATCCGCGGCCATTACCGCCCGGGTTCCGACTCTGCTCCCTGCTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002844.14 ENSMUST00000113429.8 ENSMUST00000113430.2 |
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| CDS-3UTR CAA 90 bp | TTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGTCGCTCTCTACGTTGTaGATGAGGGTCCCCACAGGC | + |
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Preference number: 5 (lower is better) Translates to: FRPAQPPLRCHSPLLGLLSLSTL*MRVPTG Trigger: GCCTGTGGGGACCCTCATCAACAACGTAGAGAGCGA...CAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR CAA 90 bp | CTTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGGCTCGCTCTCTACGTaGTTGATGAGGGTCCCCACA | + |
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Preference number: 5 (lower is better) Translates to: LSAGPASLALPQPTVRPLGSLST*LMRVPT Trigger: TGTGGGGACCCTCATCAACAACGTAGAGAGCGAGCC...AAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS CCA 90 bp | CTTCCAGGACACAAACTTGGCACTGCGGTCCGCAGACATATGCACTaGGCGGTAAGAGGGCGACACCAAGGCAGGGGGCAGCTGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LPGHKLGTAVRRHMH*AVRGRHQGRGQLKE Trigger: CTCCTTCAGCTGCCCCCTGCCTTGGTGTCGCCCTCTTACCGCCCAGTGCATATGTCTGCGGACCGCAGTGCCAAGTTTGTGTCCTGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002844.14 ENSMUST00000113429.8 ENSMUST00000113430.2 |
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| CDS-3UTR CAA 90 bp | TTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGATACTCGGCCTACAGTaGCAGTGCATGACTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: FRPAQPPLRCHSPLLGLLILGLQ*QCMTPA Trigger: TGCTGGAGTCATGCACTGCAACTGTAGGCCGAGTAT...CAAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS-3UTR CAA 90 bp | CTTTCGGCCGGCCCAGCCTCCCTTGCGTTGCCACAGCCCACTGTTAGGCCTCTTGGTTTAACTGTGTACTaGGTACGACTCTTCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: LSAGPASLALPQPTVRPLGLTVY*VRLFQD Trigger: GTCCTGGAAGAGTCGTACCAAGTACACAGTTAAACC...AAGAGGCCTAACAGTGGGCTGTGGCAACGCAAGGGAGGCTGGGCCGGCCGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS GCA 72 bp | GCGACACCAAGGCAGGGGGCAGCTGAAGGAGGACATTaGTCTGGGCAGCAGGGAGCAGAGTCGGAACCCGGG | + |
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Preference number: 6 (lower is better) Translates to: ATPRQGAAEGGH*SGQQGAESEPG Trigger: CCCGGGTTCCGACTCTGCTCCCTGCTGCCCAGAGCAATGTCCTCCTTCAGCTGCCCCCTGCCTTGGTGTCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113430.2 |
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| CDS GCA 72 bp | GCGACACCAAGGCAGGGGGCAGCTGAAGGAGGACATTaGTCTGTATCTGGGCAGCAGGGAGCAGAGTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: ATPRQGAAEGGH*SVSGQQGAESE Trigger: TTCCGACTCTGCTCCCTGCTGCCCAGATACAGAGCAATGTCCTCCTTCAGCTGCCCCCTGCCTTGGTGTCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002844.14 ENSMUST00000113429.8 |
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| CDS GCA 72 bp | ACTTGGTACGACTCTTCCAGGACACAAACTTGGCACTaGGGTCCGCAGACATATGCACTGGGCGGTAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: TWYDSSRTQTWH*GPQTYALGGKR Trigger: CCTCTTACCGCCCAGTGCATATGTCTGCGGACCGCAGTGCCAAGTTTGTGTCCTGGAAGAGTCGTACCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002844.14 ENSMUST00000113429.8 ENSMUST00000113430.2 |
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| CDS GCA 72 bp | ACAGGCAGCGCCCCAAGTGGATGTGCATCCCCCTCCTaGCATCCTGCCTATGTGATTAGAGTTCAGGATTGT | + |
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Preference number: 6 (lower is better) Translates to: TGSAPSGCASPS*HPAYVIRVQDC Trigger: ACAATCCTGAACTCTAATCACATAGGCAGGATGGCAGGAGGGGGATGCACATCCACTTGGGGCGCTGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113429.8 |
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| CDS CAA 72 bp | CCTGCCTTGCCGATGACCCGCTGGTTATGGTTAACGTaGGATACTCGGCCTACAGTTGCAGTGCATGACTCC | + |
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Preference number: 6 (lower is better) Translates to: PALPMTRWLWLT*DTRPTVAVHDS Trigger: GGAGTCATGCACTGCAACTGTAGGCCGAGTATCCAACGTTAACCATAACCAGCGGGTCATCGGCAAGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002844.14 ENSMUST00000113430.2 |
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| CDS GCA 72 bp | TTTCCTTTTCTGGCCGGAACCGTAGAAAGTCAATCATaGGATAATTCTGTTTGTGGCCTCCACCGATACCAT | + |
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Preference number: 6 (lower is better) Translates to: FPFLAGTVESQS*DNSVCGLHRYH Trigger: ATGGTATCGGTGGAGGCCACAAACAGAATTATCGCATGATTGACTTTCTACGGTTCCGGCCAGAAAAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002844.14 ENSMUST00000113429.8 ENSMUST00000113430.2 |
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