Pregenerated sensors for MRPL17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030879Ensembl transcript IDs: ENSMUST00000033170.7, ENSMUST00000124482.3, ENSMUST00000176158.2, ENSMUST00000176887.2
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGAGCTGTGGAGGCTTGCGTCCTGGTTATGGTGCAGGTCCTGCTaGAGTCCCAGGAGCAGCTGGTTTAGGAGAGTAAGGTTGCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: QELWRLASWLWCRSC*SPRSSWFRRVRLLS Trigger: AGACAGCAACCTTACTCTCCTAAACCAGCTGCTCCTGGGACTGCAGCAGGACCTGCACCATAACCAGGACGCAAGCCTCCACAGCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| 3UTR GCA 90 bp | CAGTTAAGTCTTTGGTGTTTGAACTGTACAGGAGCTGTGGAGGCTTaGGTCCTGGTTATGGTGCAGGTCCTGCTGCAGTCCCAGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: QLSLWCLNCTGAVEA*VLVMVQVLLQSQEQ Trigger: CTGCTCCTGGGACTGCAGCAGGACCTGCACCATAACCAGGACGCAAGCCTCCACAGCTCCTGTACAGTTCAAACACCAAAGACTTAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| 3UTR CCA 90 bp | CGGGCACCACACCTATGCACCACTCTCCAGCTCCAGTTAAGTCTTTaGTGTTTGAACTGTACAGGAGCTGTGGAGGCTTGCGTCCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: RAPHLCTTLQLQLSL*CLNCTGAVEACVLV Trigger: AACCAGGACGCAAGCCTCCACAGCTCCTGTACAGTTCAAACACCAAAGACTTAACTGGAGCTGGAGAGTGGTGCATAGGTGTGGTGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| 3UTR TCA 90 bp | CCCACACCTAGCTTTTTGTGTGGCTTGGGATGTCACTTCAGGACCTaGTGCTCAAGAGGTGGGCATTTTATCGAGTCATTCCGCCGGTTC | + |
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Preference number: 1 (lower is better) Translates to: PTPSFLCGLGCHFRT*CSRGGHFIESFRRF Trigger: GAACCGGCGGAATGACTCGATAAAATGCCCACCTCTTGAGCATCAGGTCCTGAAGTGACATCCCAAGCCACACAAAAAGCTAGGTGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR TCA 90 bp | TGTCTAAGGGCTCCAGGAAATGGGGTGGCCTTGGCCTTAAGGGCTTaGGGAAGTGGCAACTTTCTTTCTAGCTGGTTGTGTGTTGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: CLRAPGNGVALALRA*GSGNFLSSWLCVVL Trigger: CAGCACAACACACAACCAGCTAGAAAGAAAGTTGCCACTTCCTCAAGCCCTTAAGGCCAAGGCCACCCCATTTCCTGGAGCCCTTAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR GCA 90 bp | ACACTACACGAGCTCCAAGACCCACGAACACGGGCACCACACCTATaGACCACTCTCCAGCTCCAGTTAAGTCTTTGGTGTTTGAACTGT | + |
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Preference number: 1 (lower is better) Translates to: TLHELQDPRTRAPHL*TTLQLQLSLWCLNC Trigger: ACAGTTCAAACACCAAAGACTTAACTGGAGCTGGAGAGTGGTGCATAGGTGTGGTGCCCGTGTTCGTGGGTCTTGGAGCTCGTGTAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| 3UTR CCA 90 bp | GCAGGGGAGGGAGGTAGTTCCCTTTATATTCTATCACCGCCATCTTaGCCCGATCTTGCTCCTTCCGATTCGGGATCTGTAGCATTCTTG | + |
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Preference number: 1 (lower is better) Translates to: AGEGGSSLYILSPPS*PDLAPSDSGSVAFL Trigger: CAAGAATGCTACAGATCCCGAATCGGAAGGAGCAAGATCGGGCCAAGATGGCGGTGATAGAATATAAAGGGAACTACCTCCCTCCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| 3UTR CCA 90 bp | TTTGTGTGGCTTGGGATGTCACTTCAGGACCTGATGCTCAAGAGGTaGGCATTTTATCGAGTCATTCCGCCGGTTCTGGAAGCAGCATTG | + |
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Preference number: 1 (lower is better) Translates to: FVWLGMSLQDLMLKR*AFYRVIPPVLEAAL Trigger: CAATGCTGCTTCCAGAACCGGCGGAATGACTCGATAAAATGCCCACCTCTTGAGCATCAGGTCCTGAAGTGACATCCCAAGCCACACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CCA 90 bp | TTGGGAACACAGGGACAGGAGGACTGCTGCATGGTGGATATAGTCTaGATTACACAGCAAGATCCCCTCCCCTCCAACAAACAAGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: LGTQGQEDCCMVDIV*ITQQDPLPSNKQAK Trigger: TTTTGCTTGTTTGTTGGAGGGGAGGGGATCTTGCTGTGTAATCCAGACTATATCCACCATGCAGCAGTCCTCCTGTCCCTGTGTTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CCA 90 bp | TCACACCCTCTAAGAGGAAGGAACTTATCCGGAAGGCCAACATCCTaGCAGATGCCTACAGCCCTATCTATGATCAGGGTGGTGATACAT | + |
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Preference number: 1 (lower is better) Translates to: SHPLRGRNLSGRPTS*QMPTALSMIRVVIH Trigger: ATGTATCACCACCCTGATCATAGATAGGGCTGTAGGCATCTGCCAGGATGTTGGCCTTCCGGATAAGTTCCTTCCTCTTAGAGGGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CCA 90 bp | TATAGAAACAAAGCTTGGCTGTCAGTGTCTAAGGGCTCCAGGAAATaGGGTGGCCTTGGCCTTAAGGGCTTGAGGAAGTGGCAACTTTCT | + |
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Preference number: 1 (lower is better) Translates to: YRNKAWLSVSKGSRK*GGLGLKGLRKWQLS Trigger: AGAAAGTTGCCACTTCCTCAAGCCCTTAAGGCCAAGGCCACCCCATTTCCTGGAGCCCTTAGACACTGACAGCCAAGCTTTGTTTCTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CCA 90 bp | TGTTGGAGCAGAAACAGGTGGATCTCTGTGAGTTTGAGGCCAGACTaGTTAACAGAGCAAGCTTCAGGACAAGGCATCCAAGGCTACAGA | + |
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Preference number: 1 (lower is better) Translates to: CWSRNRWISVSLRPD*LTEQASGQGIQGYR Trigger: TCTGTAGCCTTGGATGCCTTGTCCTGAAGCTTGCTCTGTTAACCAGTCTGGCCTCAAACTCACAGAGATCCACCTGTTTCTGCTCCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR TCA 90 bp | GATTCTAGGAGTCAAGTTATCAGGCTTGGCACCATCTTTACGGAATaGACCATCTTCCTGGCCCCACACCTAGCTTTTTGTGTGGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: DSRSQVIRLGTIFTE*TIFLAPHLAFCVAW Trigger: CCAAGCCACACAAAAAGCTAGGTGTGGGGCCAGGAAGATGGTTCATTCCGTAAAGATGGTGCCAAGCCTGATAACTTGACTCCTAGAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CCA 90 bp | ACTGAGGAGGCAGAGGCAGGTGGATCGCTTAGTTCAAGGCCAACCTaGTCTACAAACAGAGTTCTAAGACAGTCAAAGAAACTGTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: TEEAEAGGSLSSRPT*STNRVLRQSKKLSQ Trigger: CTGAGACAGTTTCTTTGACTGTCTTAGAACTCTGTTTGTAGACCAGGTTGGCCTTGAACTAAGCGATCCACCTGCCTCTGCCTCCTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CCA 90 bp | TGGTGGGACACGCTTTTAATTCTAGTGTGTTGGAGCAGAAACAGGTaGATCTCTGTGAGTTTGAGGCCAGACTGGTTAACAGAGCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: WWDTLLILVCWSRNR*ISVSLRPDWLTEQA Trigger: AGCTTGCTCTGTTAACCAGTCTGGCCTCAAACTCACAGAGATCCACCTGTTTCTGCTCCAACACACTAGAATTAAAAGCGTGTCCCACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR GCA 90 bp | CCACAGGTTGGAAGAACTTGGGAAAGCTGTCCTCTGGCCTCTATCTaGATTCTGAGATGCATGTACCCTCCCTACTCAATAAAGAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: PQVGRTWESCPLASI*ILRCMYPPYSIKKY Trigger: ATACTTCTTTATTGAGTAGGGAGGGTACATGCATCTCAGAATGCAGATAGAGGCCAGAGGACAGCTTTCCCAAGTTCTTCCAACCTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR TCA 90 bp | GTGGATATAAATAAGCTCCATGCTTCTCACATACCCTGGCCATTCTaGAACAGGATTTCCTCTTTCTGGGTTCCCACAGAGGTCCACTTT | + |
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Preference number: 1 (lower is better) Translates to: VDINKLHASHIPWPF*NRISSFWVPTEVHF Trigger: AAAGTGGACCTCTGTGGGAACCCAGAAAGAGGAAATCCTGTTTCAGAATGGCCAGGGTATGTGAGAAGCATGGAGCTTATTTATATCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR GCA 90 bp | CTCAGACTTAACTACTGGGTTTATGCTGAAAAGTCAGAGGACATCTaGACCATGCCCATGCATCTAAGAGCATACAGAAAGGAGCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LRLNYWVYAEKSEDI*TMPMHLRAYRKEPS Trigger: TGAAGGCTCCTTTCTGTATGCTCTTAGATGCATGGGCATGGTGCAGATGTCCTCTGACTTTTCAGCATAAACCCAGTAGTTAAGTCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR TCA 90 bp | AATTGTTCAGGAGAACTTCTTTCCATGACTCCCTGGTCAAGTCTCTaGACATACAGAACAGCAGCCAGGATGGGTCATATCCCATATTTA | + |
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Preference number: 1 (lower is better) Translates to: NCSGELLSMTPWSSL*TYRTAARMGHIPYL Trigger: TAAATATGGGATATGACCCATCCTGGCTGCTGTTCTGTATGTTCAGAGACTTGACCAGGGAGTCATGGAAAGAAGTTCTCCTGAACAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR GCA 90 bp | AGGGCAAAGAGTCTTAGAATAGTGTCACTGAAGCTAATGTCTTTCTaGTTCCACAGTGACCTTCTACCTTCAGGTGCTGCACTAATTGTT | + |
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Preference number: 1 (lower is better) Translates to: RAKSLRIVSLKLMSF*FHSDLLPSGAALIV Trigger: AACAATTAGTGCAGCACCTGAAGGTAGAAGGTCACTGTGGAAGCAGAAAGACATTAGCTTCAGTGACACTATTCTAAGACTCTTTGCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR GCA 90 bp | ATAGAGCCCAGAAATAAACACAAGCACGCAGAGTCAACTGATTTTTaGCAAATGAGTATACACTGGAGGAAATCACTCCAAAAACTGTTG | + |
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Preference number: 1 (lower is better) Translates to: IEPRNKHKHAESTDF*QMSIHWRKSLQKLL Trigger: CAACAGTTTTTGGAGTGATTTCCTCCAGTGTATACTCATTTGGCAAAAATCAGTTGACTCTGCGTGCTTGTGTTTATTTCTGGGCTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CCA 90 bp | CACAAGCACGCAGAGTCAACTGATTTTTGCCAAATGAGTATACACTaGAGGAAATCACTCCAAAAACTGTTGTTGAGAAACCATATATCC | + |
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Preference number: 1 (lower is better) Translates to: HKHAESTDFCQMSIH*RKSLQKLLLRNHIS Trigger: GGATATATGGTTTCTCAACAACAGTTTTTGGAGTGATTTCCTCCAGTGTATACTCATTTGGCAAAAATCAGTTGACTCTGCGTGCTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR TCA 90 bp | ATTCCGCCGGTTCTGGAAGCAGCATTGTTAAAGGTAATGCAAATGTaGAGGAAAATGTCTTGTGAGGATATGCAATTTATATACATATTG | + |
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Preference number: 1 (lower is better) Translates to: IPPVLEAALLKVMQM*RKMSCEDMQFIYIL Trigger: CAATATGTATATAAATTGCATATCCTCACAAGACATTTTCCTTCACATTTGCATTACCTTTAACAATGCTGCTTCCAGAACCGGCGGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR GCA 90 bp | GTGCAAAGAGGATCGTGTGAGTCAGCAGGGAGGTCTGGGTCTCATTATGAGGGGTTATGGTGCAGGTCCTaGTGCAGTCCCAGGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VQRGSCESAGRSGSHYEGLWCRS*CSPRSS Trigger: GCTGCTCCTGGGACTGCAGCAGGACCTGCACCATAA...CCCCTCATAATGAGACCCAGACCTCCCTGCTGACTCACACGATCCTCTTTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| 3UTR-3UTR CCA 90 bp | CCACGAACACGGGCACCACACCTATGCACCACTCTCCAGCTCCAGTTAAGTCTTCTTGCGTCCTGGTTATaGTGCAGGTCCTGCTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PRTRAPHLCTTLQLQLSLLASWL*CRSCCS Trigger: ACTGCAGCAGGACCTGCACCATAACCAGGACGCAAG...AAGACTTAACTGGAGCTGGAGAGTGGTGCATAGGTGTGGTGCCCGTGTTCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| 3UTR CAA 90 bp | CCAGTTAAGTCTTTGGTGTTTGAACTGTACAGGAGCTGTGGAGGCTaGCGTCCTGGTTATGGTGCAGGTCCTGCTGCAGTCCCAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: PVKSLVFELYRSCGG*RPGYGAGPAAVPGA Trigger: TGCTCCTGGGACTGCAGCAGGACCTGCACCATAACCAGGACGCAAGCCTCCACAGCTCCTGTACAGTTCAAACACCAAAGACTTAACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| 3UTR CAA 90 bp | ACGGGCACCACACCTATGCACCACTCTCCAGCTCCAGTTAAGTCTTaGGTGTTTGAACTGTACAGGAGCTGTGGAGGCTTGCGTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: TGTTPMHHSPAPVKS*VFELYRSCGGLRPG Trigger: ACCAGGACGCAAGCCTCCACAGCTCCTGTACAGTTCAAACACCAAAGACTTAACTGGAGCTGGAGAGTGGTGCATAGGTGTGGTGCCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTTGCGTCCTGGTTATGGTGCAGGTCCTGCTGCAGTCCCAGGAGCAGCTGCACTTTAAACAGCTTTaGGATCAAGTCCTTCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: EACVLVMVQVLLQSQEQLHFKQL*DQVLLL Trigger: TAGGAGAAGGACTTGATCCCAAAGCTGTTTAAAGTG...CAGCTGCTCCTGGGACTGCAGCAGGACCTGCACCATAACCAGGACGCAAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033170.7 |
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| 3UTR CAA 90 bp | CCACACCTATGCACCACTCTCCAGCTCCAGTTAAGTCTTTGGTGTTaGAACTGTACAGGAGCTGTGGAGGCTTGCGTCCTGGTTATGGTG | + |
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Preference number: 2 (lower is better) Translates to: PHLCTTLQLQLSLWC*NCTGAVEACVLVMV Trigger: CACCATAACCAGGACGCAAGCCTCCACAGCTCCTGTACAGTTCAAACACCAAAGACTTAACTGGAGCTGGAGAGTGGTGCATAGGTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| 3UTR CAA 90 bp | GTACCCAGCTGGGCAGTGGTGGGACACGCTTTTAATTCTAGTGTGTaGGAGCAGAAACAGGTGGATCTCTGTGAGTTTGAGGCCAGACTG | + |
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Preference number: 2 (lower is better) Translates to: VPSWAVVGHAFNSSV*EQKQVDLCEFEARL Trigger: CAGTCTGGCCTCAAACTCACAGAGATCCACCTGTTTCTGCTCCAACACACTAGAATTAAAAGCGTGTCCCACCACTGCCCAGCTGGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR GCA 90 bp | ATGAGGGGGCTTTACAATGCTACTTCCAGGCCTCACACACTACACGAGCTCCAACAGGGACAGGAGGACTaGTGCATGGTGGATATAGTC | + |
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Preference number: 2 (lower is better) Translates to: MRGLYNATSRPHTLHELQQGQED*CMVDIV Trigger: GACTATATCCACCATGCAGCAGTCCTCCTGTCCCTG...TTGGAGCTCGTGTAGTGTGTGAGGCCTGGAAGTAGCATTGTAAAGCCCCCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR CCA 90 bp | ACCACAGGTTGGAAGAACTTGGGAAAGCTGTCCTCTGGCCTCTATCTGCATTCTGGAAGGCCAACATCCTaGCAGATGCCTACAGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: TTGWKNLGKLSSGLYLHSGRPTS*QMPTAL Trigger: TAGGGCTGTAGGCATCTGCCAGGATGTTGGCCTTCC...AGAATGCAGATAGAGGCCAGAGGACAGCTTTCCCAAGTTCTTCCAACCTGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR GCA 90 bp | CACCTATGCACCACTCTCCAGCTCCAGTTAAGTCTTTGGTGTTTGAACTGTACATTATGGTGCAGGTCCTaGTGCAGTCCCAGGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: HLCTTLQLQLSLWCLNCTLWCRS*CSPRSS Trigger: GCTGCTCCTGGGACTGCAGCAGGACCTGCACCATAA...TGTACAGTTCAAACACCAAAGACTTAACTGGAGCTGGAGAGTGGTGCATAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTCTCATTATGAGGGGGCTTTACAATGCTACTTCCAGGCCTCACACACTAACTGTCTTAGGAGGCTaGGCATCTGGATGCCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: LGLIMRGLYNATSRPHTLTVLGG*ASGCLL Trigger: TAAGAGGCATCCAGATGCTCAGCCTCCTAAGACAGT...TAGTGTGTGAGGCCTGGAAGTAGCATTGTAAAGCCCCCTCATAATGAGACCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR GCA 90 bp | AGAAACAGGTGGATCTCTGTGAGTTTGAGGCCAGACTGGTTAACAGAGCAAGCTAAGCAAATGCGGCTGTaGGGCATAACAGACACAGGC | + |
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Preference number: 2 (lower is better) Translates to: RNRWISVSLRPDWLTEQAKQMRL*GITDTG Trigger: GCCTGTGTCTGTTATGCCGCACAGCCGCATTTGCTT...AGCTTGCTCTGTTAACCAGTCTGGCCTCAAACTCACAGAGATCCACCTGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR CCA 90 bp | AGAAACAGGTGGATCTCTGTGAGTTTGAGGCCAGACTGGTTAACAGAGCAAGCTCTGCACCCTCCTTTGTaGATGGACAGACAGTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: RNRWISVSLRPDWLTEQALHPPL*MDRQWY Trigger: GTACCACTGTCTGTCCATCCACAAAGGAGGGTGCAG...AGCTTGCTCTGTTAACCAGTCTGGCCTCAAACTCACAGAGATCCACCTGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAAGAGCATACAGAAAGGAGCCTTCAGGGTACAGACATTATCCAGGGTGAACAAGGGCTCCAGGAAATaGGGTGGCCTTGGCCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: SKSIQKGAFRVQTLSRVNKGSRK*GGLGLK Trigger: CTTAAGGCCAAGGCCACCCCATTTCCTGGAGCCCTT...GTTCACCCTGGATAATGTCTGTACCCTGAAGGCTCCTTTCTGTATGCTCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CAA 90 bp | GCTACTAAGTCTGATGACCTGTCTTCCATACCTAGGAACCACAGGTaGGAAGAACTTGGGAAAGCTGTCCTCTGGCCTCTATCTGCATTC | + |
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Preference number: 2 (lower is better) Translates to: ATKSDDLSSIPRNHR*EELGKAVLWPLSAF Trigger: GAATGCAGATAGAGGCCAGAGGACAGCTTTCCCAAGTTCTTCCAACCTGTGGTTCCTAGGTATGGAAGACAGGTCATCAGACTTAGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CAA 90 bp | GCATTTCCACACAAAGCACAGTTGTTTCATAAACTTCGGCCAGGGTaGAATATGGCAGGCTTGAGATGTGGCTGGACCAGGCTGTCAATG | + |
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Preference number: 2 (lower is better) Translates to: AFPHKAQLFHKLRPG*NMAGLRCGWTRLSM Trigger: CATTGACAGCCTGGTCCAGCCACATCTCAAGCCTGCCATATTCAACCCTGGCCGAAGTTTATGAAACAACTGTGCTTTGTGTGGAAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAAGAGCATACAGAAAGGAGCCTTCAGGGTACAGACATTATCCAGGGTGAACACCCTCCTTTGTGGATaGACAGACAGTGGTACAGCC | + |
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Preference number: 2 (lower is better) Translates to: SKSIQKGAFRVQTLSRVNTLLCG*TDSGTA Trigger: GGCTGTACCACTGTCTGTCCATCCACAAAGGAGGGT...GTTCACCCTGGATAATGTCTGTACCCTGAAGGCTCCTTTCTGTATGCTCTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR TCA 90 bp | TCTAAGAGCATACAGAAAGGAGCCTTCAGGGTACAGACATTATCCAGGGTGAACTTTCTGCTTCCACAGTaGCCTTCTACCTTCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SKSIQKGAFRVQTLSRVNFLLPQ*PSTFRC Trigger: GCACCTGAAGGTAGAAGGTCACTGTGGAAGCAGAAA...GTTCACCCTGGATAATGTCTGTACCCTGAAGGCTCCTTTCTGTATGCTCTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR TCA 90 bp | AGAAACAGGTGGATCTCTGTGAGTTTGAGGCCAGACTGGTTAACAGAGCAAGCTTTGGCCTTAAGGGCTTaGGGAAGTGGCAACTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: RNRWISVSLRPDWLTEQALALRA*GSGNFL Trigger: AAGAAAGTTGCCACTTCCTCAAGCCCTTAAGGCCAA...AGCTTGCTCTGTTAACCAGTCTGGCCTCAAACTCACAGAGATCCACCTGTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR GCA 90 bp | AGAAACAGGTGGATCTCTGTGAGTTTGAGGCCAGACTGGTTAACAGAGCAAGCTCCTCTGGCCTCTATCTaGATTCTGAGATGCATGTAC | + |
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Preference number: 2 (lower is better) Translates to: RNRWISVSLRPDWLTEQAPLASI*ILRCMY Trigger: GTACATGCATCTCAGAATGCAGATAGAGGCCAGAGG...AGCTTGCTCTGTTAACCAGTCTGGCCTCAAACTCACAGAGATCCACCTGTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGAAGATTCCTGTACAGAGGCTCACACAGCTAGTTATCAGGAAGCAATCTCTGTGGTGGTGAACACTTaGGAACACAGGGACAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: FEDSCTEAHTASYQEAISVVVNT*EHRDRR Trigger: CCTCCTGTCCCTGTGTTCCCAAGTGTTCACCACCAC...AGAGATTGCTTCCTGATAACTAGCTGTGTGAGCCTCTGTACAGGAATCTTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAAGAGCATACAGAAAGGAGCCTTCAGGGTACAGACATTATCCAGGGTGAACAGGATTTCCTCTTTCTaGGTTCCCACAGAGGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SKSIQKGAFRVQTLSRVNRISSF*VPTEVH Trigger: GTGGACCTCTGTGGGAACCCAGAAAGAGGAAATCCT...GTTCACCCTGGATAATGTCTGTACCCTGAAGGCTCCTTTCTGTATGCTCTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CAA 90 bp | CTGAAACAGGATTTCCTCTTTCTGGGTTCCCACAGAGGTCCACTTTaGGCAACAAAAGCTTCCAGGAAATTCCCAGCAGGCTTAACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LKQDFLFLGSHRGPL*ATKASRKFPAGLTF Trigger: GAAAGTTAAGCCTGCTGGGAATTTCCTGGAAGCTTTTGTTGCCAAAAGTGGACCTCTGTGGGAACCCAGAAAGAGGAAATCCTGTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAAACAGGTGGATCTCTGTGAGTTTGAGGCCAGACTGGTTAACAGAGCAAGCTATACCCTGGCCATTCTaGAACAGGATTTCCTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: RNRWISVSLRPDWLTEQAIPWPF*NRISSF Trigger: GAAAGAGGAAATCCTGTTTCAGAATGGCCAGGGTAT...AGCTTGCTCTGTTAACCAGTCTGGCCTCAAACTCACAGAGATCCACCTGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTAAGAGCATACAGAAAGGAGCCTTCAGGGTACAGACATTATCCAGGGTGAACATGACAGGGACTGTGTaGACAAAGTGTAAAGGGACC | + |
|
Preference number: 2 (lower is better) Translates to: SKSIQKGAFRVQTLSRVNMTGTV*TKCKGT Trigger: GGTCCCTTTACACTTTGTTCACACAGTCCCTGTCAT...GTTCACCCTGGATAATGTCTGTACCCTGAAGGCTCCTTTCTGTATGCTCTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR GCA 90 bp | GGGGAGGGAGGTAGTTCCCTTTATATTCTATCACCGCCATCTTGGCCCGATCTTACTTACAGGAAGTTATaGGGATGCTCATTTTACCCA | + |
|
Preference number: 2 (lower is better) Translates to: GEGGSSLYILSPPSWPDLTYRKL*GCSFYP Trigger: TGGGTAAAATGAGCATCCGCATAACTTCCTGTAAGT...AAGATCGGGCCAAGATGGCGGTGATAGAATATAAAGGGAACTACCTCCCTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033170.7 |
||
| 3UTR-3UTR GCA 90 bp | AGAAACAGGTGGATCTCTGTGAGTTTGAGGCCAGACTGGTTAACAGAGCAAGCTTCTATCAGTAGTGTGTaGCACAGCATGTGTAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: RNRWISVSLRPDWLTEQASISSV*HSMCSQ Trigger: CTGACTACACATGCTGTGGCACACACTACTGATAGA...AGCTTGCTCTGTTAACCAGTCTGGCCTCAAACTCACAGAGATCCACCTGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGGGGGCTTTACAATGCTACTTCCAGGCCTCACACACTACACGAGCTCCAAAGTCCTTCTCCTAGATaGGGAGAGTTAATCAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: MRGLYNATSRPHTLHELQSPSPR*GELIRK Trigger: TTTTCTGATTAACTCTCCCCATCTAGGAGAAGGACT...TTGGAGCTCGTGTAGTGTGTGAGGCCTGGAAGTAGCATTGTAAAGCCCCCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033170.7 |
||
| 3UTR CAA 90 bp | CAGAGTGAGTTCCAGGACAGCCAAGACTACACAGAGGATCCATGTTaGTGTAGATCAAAATCTGGAACTCGATGTGGAGAACCACTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: QSEFQDSQDYTEDPC*CRSKSGTRCGEPLF Trigger: AAAGAGTGGTTCTCCACATCGAGTTCCAGATTTTGATCTACACAAACATGGATCCTCTGTGTAGTCTTGGCTGTCCTGGAACTCACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGGGGGCTTTACAATGCTACTTCCAGGCCTCACACACTACACGAGCTCCAATTAGAACCTAAGTTGTaGATTTACTGTCTTAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: MRGLYNATSRPHTLHELQLEPKL*IYCLRR Trigger: CCTCCTAAGACAGTAAATTCACAACTTAGGTTCTAA...TTGGAGCTCGTGTAGTGTGTGAGGCCTGGAAGTAGCATTGTAAAGCCCCCTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR TCA 90 bp | CCCAATCCTTACCATGAGTATGGCAATATGTACCTTCAATCTCAGCACAAGGGAGAGAACTTCTTTCCATaGCTCCCTGGTCAAGTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PNPYHEYGNMYLQSQHKGENFFP*LPGQVS Trigger: AGAGACTTGACCAGGGAGTCATGGAAAGAAGTTCTC...TCCCTTGTGCTGAGATTGAAGGTACATATTGCCATACTCATGGTAAGGATTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCCCAATCCTTACCATGAGTATGGCAATATGTACCTTCAATCTCAGCACAAGGCATAGGAAGATGGTTTaGAATCAAGAGGTACAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: PPILTMSMAICTFNLSTRHRKMV*NQEVQG Trigger: GCCCTGTACCTCTTGATTCCAAACCATCTTCCTATG...CCTTGTGCTGAGATTGAAGGTACATATTGCCATACTCATGGTAAGGATTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCAATCCTTACCATGAGTATGGCAATATGTACCTTCAATCTCAGCACAAGGGACTAGGAACCACAGGTTaGAAGAACTTGGGAAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PNPYHEYGNMYLQSQHKGLGTTG*KNLGKL Trigger: CAGCTTTCCCAAGTTCTTCCAACCTGTGGTTCCTAG...TCCCTTGTGCTGAGATTGAAGGTACATATTGCCATACTCATGGTAAGGATTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTAAGAGCATACAGAAAGGAGCCTTCAGGGTACAGACATTATCCAGGGTGAACGTCACCATAGGAAGATaGTTTGGAATCAAGAGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: SKSIQKGAFRVQTLSRVNVTIGR*FGIKRY Trigger: GTACCTCTTGATTCCAAACCATCTTCCTATGGTGAC...GTTCACCCTGGATAATGTCTGTACCCTGAAGGCTCCTTTCTGTATGCTCTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTAAGAGCATACAGAAAGGAGCCTTCAGGGTACAGACATTATCCAGGGTGAACATCAGAAGAGCCACGTaGAAGTTTGTGTACAAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: SKSIQKGAFRVQTLSRVNIRRAT*KFVYKL Trigger: TAACTTGTACACAAACTTTCACGTGGCTCTTCTGAT...GTTCACCCTGGATAATGTCTGTACCCTGAAGGCTCCTTTCTGTATGCTCTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR GCA 90 bp | GATCTTGCTCCTTCCGATTCGGGATCTGTAGCATTCTTGTGTAGTTCCCATTCTAGGAAGTTATGCGGATaGTCATTTTACCCAAGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: DLAPSDSGSVAFLCSSHSRKLCG*SFYPSQ Trigger: TTGACTTGGGTAAAATGAGCATCCGCATAACTTCCT...AGAATGGGAACTACACAAGAATGCTACAGATCCCGAATCGGAAGGAGCAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| 3UTR CAA 90 bp | GACAATAGGGTGCATGCATGTGGTGGTAAGCATGGTCAAAAGACATaGGTAGATATGTATGAAGATGCCAAGGTGAAACCTAGTCTCATA | + |
|
Preference number: 2 (lower is better) Translates to: DNRVHACGGKHGQKT*VDMYEDAKVKPSLI Trigger: TATGAGACTAGGTTTCACCTTGGCATCTTCATACATATCTACCAATGTCTTTTGACCATGCTTACCACCACATGCATGCACCCTATTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CAA 90 bp | GTCTTCAGTCTAATGCCCTATACCATAGGGAACTATAAAGCAATGTaGTATTTCAGTGTACTACATAAACACAGCAGGCATATCTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: VFSLMPYTIGNYKAM*YFSVLHKHSRHILC Trigger: ACACAAGATATGCCTGCTGTGTTTATGTAGTACACTGAAATACAACATTGCTTTATAGTTCCCTATGGTATAGGGCATTAGACTGAAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR TCA 90 bp | GAGGATATGCAATTTATATACATATTGACCGCCACATGTTCTGATGCAAAATGCCAGGCATATCTTGTGTaGCAAAGTTATGAGTTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: EDMQFIYILTATCSDAKCQAYLV*QSYEFR Trigger: CCTAAACTCATAACTTTGTCACACAAGATATGCCTG...GCATTTTGCATCAGAACATGTGGCGGTCAATATGTATATAAATTGCATATCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | ACTGTACAGGAGCTGTGGAGGCTTGCGTCCTGGTTATaGTGCAGGTCCTGCTGCAGTCCCAGGAGCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TVQELWRLASWL*CRSCCSPRSSW Trigger: CCAGCTGCTCCTGGGACTGCAGCAGGACCTGCACCATAACCAGGACGCAAGCCTCCACAGCTCCTGTACAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| 3UTR GCA 72 bp | TGGAGGCTTGCGTCCTGGTTATGGTGCAGGTCCTGCTaGAGTCCCAGGAGCAGCTGGTTTAGGAGAGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: WRLASWLWCRSC*SPRSSWFRRVR Trigger: CCTTACTCTCCTAAACCAGCTGCTCCTGGGACTGCAGCAGGACCTGCACCATAACCAGGACGCAAGCCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| 3UTR GCA 72 bp | CTTTGGTGTTTGAACTGTACAGGAGCTGTGGAGGCTTaGGTCCTGGTTATGGTGCAGGTCCTGCTGCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LWCLNCTGAVEA*VLVMVQVLLQS Trigger: GGACTGCAGCAGGACCTGCACCATAACCAGGACGCAAGCCTCCACAGCTCCTGTACAGTTCAAACACCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| 3UTR GCA 72 bp | GAGCTCCAAGACCCACGAACACGGGCACCACACCTATaGACCACTCTCCAGCTCCAGTTAAGTCTTTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ELQDPRTRAPHL*TTLQLQLSLWC Trigger: ACACCAAAGACTTAACTGGAGCTGGAGAGTGGTGCATAGGTGTGGTGCCCGTGTTCGTGGGTCTTGGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| 3UTR CCA 72 bp | AAAGCTTGGCTGTCAGTGTCTAAGGGCTCCAGGAAATaGGGTGGCCTTGGCCTTAAGGGCTTGAGGAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KAWLSVSKGSRK*GGLGLKGLRKW Trigger: CCACTTCCTCAAGCCCTTAAGGCCAAGGCCACCCCATTTCCTGGAGCCCTTAGACACTGACAGCCAAGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | GTTAGAAGCTCAGGCGGCTGCACCCTCCTTTGTGGATaGACAGACAGTGGTACAGCCATTGGTAAGACACAC | + |
|
Preference number: 3 (lower is better) Translates to: VRSSGGCTLLCG*TDSGTAIGKTH Trigger: GTGTGTCTTACCAATGGCTGTACCACTGTCTGTCCATCCACAAAGGAGGGTGCAGCCGCCTGAGCTTCTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | CAGGGACAGGAGGACTGCTGCATGGTGGATATAGTCTaGATTACACAGCAAGATCCCCTCCCCTCCAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: QGQEDCCMVDIV*ITQQDPLPSNK Trigger: TTTGTTGGAGGGGAGGGGATCTTGCTGTGTAATCCAGACTATATCCACCATGCAGCAGTCCTCCTGTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | GCAAATGCGGCTGTGCGGCATAACAGACACAGGCCATaGCACAGGATAGAGCCCAGAAATAAACACAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: ANAAVRHNRHRP*HRIEPRNKHKH Trigger: GTGCTTGTGTTTATTTCTGGGCTCTATCCTGTGCCATGGCCTGTGTCTGTTATGCCGCACAGCCGCATTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCACAGGTTGGAAGAACTTGGGAAAGCTGTCCTCTGGCCTCTATCTGCATTCTTGTGGTGGTGAACACTaGGGAACACAGGGACAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TTGWKNLGKLSSGLYLHSCGGEH*GTQGQE Trigger: CTCCTGTCCCTGTGTTCCCAAGTGTTCACCACCACA...AGAATGCAGATAGAGGCCAGAGGACAGCTTTCCCAAGTTCTTCCAACCTGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | TGCAGAAGGAAGAGTGACAGCTCTGCCGGGACCAGGTaGTTTAGTGTAAGCAGCTGTAGGGCAAAGAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CRRKSDSSAGTR*FSVSSCRAKSL Trigger: AAGACTCTTTGCCCTACAGCTGCTTACACTAAATCACCTGGTCCCGGCAGAGCTGTCACTCTTCCTTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | CACCTATGCACCACTCTCCAGCTCCAGTTAAGTCTTTaGTGTTTGAACTGTACAGGAGCTGTGGAGGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: HLCTTLQLQLSL*CLNCTGAVEAC Trigger: GCAAGCCTCCACAGCTCCTGTACAGTTCAAACACCAAAGACTTAACTGGAGCTGGAGAGTGGTGCATAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| 3UTR CCA 72 bp | CTAAGAGGAAGGAACTTATCCGGAAGGCCAACATCCTaGCAGATGCCTACAGCCCTATCTATGATCAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LRGRNLSGRPTS*QMPTALSMIRV Trigger: CACCCTGATCATAGATAGGGCTGTAGGCATCTGCCAGGATGTTGGCCTTCCGGATAAGTTCCTTCCTCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | CTTGGGATGTCACTTCAGGACCTGATGCTCAAGAGGTaGGCATTTTATCGAGTCATTCCGCCGGTTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LGMSLQDLMLKR*AFYRVIPPVLE Trigger: TTCCAGAACCGGCGGAATGACTCGATAAAATGCCCACCTCTTGAGCATCAGGTCCTGAAGTGACATCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | AGGTCAAAGTGGAGCCTCTGGATGACAGGGACTGTGTaGACAAAGTGTAAAGGGACCTGTGCCAGAAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: RSKWSLWMTGTV*TKCKGTCARKT Trigger: GGTTTTTCTGGCACAGGTCCCTTTACACTTTGTTCACACAGTCCCTGTCATCCAGAGGCTCCACTTTGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR GCA 72 bp | GGTGAACACTTGGGAACACAGGGACAGGAGGACTGCTaGATGGTGGATATAGTCTGGATTACACAGCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GEHLGTQGQEDC*MVDIVWITQQD Trigger: ATCTTGCTGTGTAATCCAGACTATATCCACCATGCAGCAGTCCTCCTGTCCCTGTGTTCCCAAGTGTTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | GGAGGTAGTTCCCTTTATATTCTATCACCGCCATCTTaGCCCGATCTTGCTCCTTCCGATTCGGGATCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GGSSLYILSPPS*PDLAPSDSGSV Trigger: TACAGATCCCGAATCGGAAGGAGCAAGATCGGGCCAAGATGGCGGTGATAGAATATAAAGGGAACTACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| 3UTR CCA 72 bp | CTGATGACCTGTCTTCCATACCTAGGAACCACAGGTTaGAAGAACTTGGGAAAGCTGTCCTCTGGCCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LMTCLPYLGTTG*KNLGKLSSGLY Trigger: ATAGAGGCCAGAGGACAGCTTTCCCAAGTTCTTCCAACCTGTGGTTCCTAGGTATGGAAGACAGGTCATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAGAGCATACAGAAAGGAGCCTTCAGGGTACAGACATTATCCAGGGTGAACCCCACACCTAGCTTTTaGTGTGGCTTGGGATGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SKSIQKGAFRVQTLSRVNPTPSF*CGLGCH Trigger: GTGACATCCCAAGCCACACAAAAAGCTAGGTGTGGG...GTTCACCCTGGATAATGTCTGTACCCTGAAGGCTCCTTTCTGTATGCTCTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | GGAGAACTTCTTTCCATGACTCCCTGGTCAAGTCTCTaGACATACAGAACAGCAGCCAGGATGGGTCATATC | + |
|
Preference number: 3 (lower is better) Translates to: GELLSMTPWSSL*TYRTAARMGHI Trigger: GATATGACCCATCCTGGCTGCTGTTCTGTATGTTCAGAGACTTGACCAGGGAGTCATGGAAAGAAGTTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | TGTAGTGCCCTGTACAACTGTGAGCTCCTTGACTGCTaGTGCTTCACTTTTAGCCAGGGTCAGATTTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: CSALYNCELLDC*CFTFSQGQIYC Trigger: GCAGTAAATCTGACCCTGGCTAAAAGTGAAGCATCAGCAGTCAAGGAGCTCACAGTTGTACAGGGCACTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR GCA 72 bp | CCTTTATATTCTATCACCGCCATCTTGGCCCGATCTTaGTCCTTCCGATTCGGGATCTGTAGCATTCTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PLYSITAILARS*SFRFGICSILV Trigger: CACAAGAATGCTACAGATCCCGAATCGGAAGGAGCAAGATCGGGCCAAGATGGCGGTGATAGAATATAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| 3UTR GCA 72 bp | GGAAGAACTTGGGAAAGCTGTCCTCTGGCCTCTATCTaGATTCTGAGATGCATGTACCCTCCCTACTCAATA | + |
|
Preference number: 3 (lower is better) Translates to: GRTWESCPLASI*ILRCMYPPYSI Trigger: TATTGAGTAGGGAGGGTACATGCATCTCAGAATGCAGATAGAGGCCAGAGGACAGCTTTCCCAAGTTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | TGCTGGACGTCAGCCAGTCACCATAGGAAGATGGTTTaGAATCAAGAGGTACAGGGCCCATCTAAATTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CWTSASHHRKMV*NQEVQGPSKLV Trigger: CACTAATTTAGATGGGCCCTGTACCTCTTGATTCCAAACCATCTTCCTATGGTGACTGGCTGACGTCCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | CTCTATGCTGGACGTCAGCCAGTCACCATAGGAAGATaGTTTGGAATCAAGAGGTACAGGGCCCATCTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LYAGRQPVTIGR*FGIKRYRAHLN Trigger: ATTTAGATGGGCCCTGTACCTCTTGATTCCAAACCATCTTCCTATGGTGACTGGCTGACGTCCAGCATAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | AGAAACAGGTGGATCTCTGTGAGTTTGAGGCCAGACTaGTTAACAGAGCAAGCTTCAGGACAAGGCATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RNRWISVSLRPD*LTEQASGQGIQ Trigger: TTGGATGCCTTGTCCTGAAGCTTGCTCTGTTAACCAGTCTGGCCTCAAACTCACAGAGATCCACCTGTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCAATCCTTACCATGAGTATGGCAATATGTACCTTCAATCTCAGCACAAGGCACAGAGGTCCACTTTaGGCAACAAAAGCTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PPILTMSMAICTFNLSTRHRGPL*ATKASR Trigger: CCTGGAAGCTTTTGTTGCCAAAAGTGGACCTCTGTG...CCTTGTGCTGAGATTGAAGGTACATATTGCCATACTCATGGTAAGGATTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAGAGCATACAGAAAGGAGCCTTCAGGGTACAGACATTATCCAGGGTGAACCCTAGGAACCACAGGTaGGAAGAACTTGGGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SKSIQKGAFRVQTLSRVNPRNHR*EELGKA Trigger: AGCTTTCCCAAGTTCTTCCAACCTGTGGTTCCTAGG...GTTCACCCTGGATAATGTCTGTACCCTGAAGGCTCCTTTCTGTATGCTCTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACAGGTGGATCTCTGTGAGTTTGAGGCCAGACTGGTTAACAGAGCAAGCTACAACTGTGAGCTCCTaGACTGCTGATGCTTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: RNRWISVSLRPDWLTEQATTVSS*TADASL Trigger: AAGTGAAGCATCAGCAGTCAAGGAGCTCACAGTTGT...AGCTTGCTCTGTTAACCAGTCTGGCCTCAAACTCACAGAGATCCACCTGTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | AATAAGCTCCATGCTTCTCACATACCCTGGCCATTCTaGAACAGGATTTCCTCTTTCTGGGTTCCCACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NKLHASHIPWPF*NRISSFWVPTE Trigger: CTCTGTGGGAACCCAGAAAGAGGAAATCCTGTTTCAGAATGGCCAGGGTATGTGAGAAGCATGGAGCTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | AGCTTTTTGTGTGGCTTGGGATGTCACTTCAGGACCTaGTGCTCAAGAGGTGGGCATTTTATCGAGTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: SFLCGLGCHFRT*CSRGGHFIESF Trigger: GAATGACTCGATAAAATGCCCACCTCTTGAGCATCAGGTCCTGAAGTGACATCCCAAGCCACACAAAAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | AGTCAAGTTATCAGGCTTGGCACCATCTTTACGGAATaGACCATCTTCCTGGCCCCACACCTAGCTTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SQVIRLGTIFTE*TIFLAPHLAFC Trigger: ACAAAAAGCTAGGTGTGGGGCCAGGAAGATGGTTCATTCCGTAAAGATGGTGCCAAGCCTGATAACTTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | AGAAAGGAGCCTTCAGGGTACAGACATTATCCAGGGTaGACAATGGGGAGTCAGCTTTGCAGGAAGTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RKEPSGYRHYPG*TMGSQLCRKFF Trigger: AAAGAACTTCCTGCAAAGCTGACTCCCCATTGTTCACCCTGGATAATGTCTGTACCCTGAAGGCTCCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR GCA 72 bp | GAAGGGGGACTAGTTGAAATAGGCAGGACAATAGGGTaGATGCATGTGGTGGTAAGCATGGTCAAAAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: EGGLVEIGRTIG*MHVVVSMVKRH Trigger: ATGTCTTTTGACCATGCTTACCACCACATGCATGCACCCTATTGTCCTGCCTATTTCAACTAGTCCCCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCACAGGTTGGAAGAACTTGGGAAAGCTGTCCTCTGGCCTCTATCTGCATTCTGAAACAAATGTGACCTaGCCTAGAAACAATTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TTGWKNLGKLSSGLYLHSETNVT*PRNNSQ Trigger: CTGAGAATTGTTTCTAGGCAAGGTCACATTTGTTTC...AGAATGCAGATAGAGGCCAGAGGACAGCTTTCCCAAGTTCTTCCAACCTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACAGGTGGATCTCTGTGAGTTTGAGGCCAGACTGGTTAACAGAGCAAGCTTGGGGCCAAACTTTTTaGCTTTGTAGGATGAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: RNRWISVSLRPDWLTEQAWGQTF*LCRMNK Trigger: CTTGTTCATCCTACAAAGCAAAAAAGTTTGGCCCCA...AGCTTGCTCTGTTAACCAGTCTGGCCTCAAACTCACAGAGATCCACCTGTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | GGTGCTGCACTAATTGTTCAGGAGAACTTCTTTCCATaGCTCCCTGGTCAAGTCTCTGAACATACAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: GAALIVQENFFP*LPGQVSEHTEQ Trigger: CTGTTCTGTATGTTCAGAGACTTGACCAGGGAGTCATGGAAAGAAGTTCTCCTGAACAATTAGTGCAGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | TGTACAAGTTATGTAGGTCAAAGTGGAGCCTCTGGATaGCAGGGACTGTGTGAACAAAGTGTAAAGGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: CTSYVGQSGASG*QGLCEQSVKGP Trigger: AGGTCCCTTTACACTTTGTTCACACAGTCCCTGTCATCCAGAGGCTCCACTTTGACCTACATAACTTGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAGAGCATACAGAAAGGAGCCTTCAGGGTACAGACATTATCCAGGGTGAACAACGCTGAGCTTCACTaGAGGAATTCAGTGACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SKSIQKGAFRVQTLSRVNNAELH*RNSVTF Trigger: AAAAGTCACTGAATTCCTCAAGTGAAGCTCAGCGTT...GTTCACCCTGGATAATGTCTGTACCCTGAAGGCTCCTTTCTGTATGCTCTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | ACACATAAAAAGACATCAAGTGGAAGGGGGACTAGTTaGAATAGGCAGGACAATAGGGTGCATGCATGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: THKKTSSGRGTS*NRQDNRVHACG Trigger: ACCACATGCATGCACCCTATTGTCCTGCCTATTTCAACTAGTCCCCCTTCCACTTGATGTCTTTTTATGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR GCA 72 bp | AGTCTTAGAATAGTGTCACTGAAGCTAATGTCTTTCTaGTTCCACAGTGACCTTCTACCTTCAGGTGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLRIVSLKLMSF*FHSDLLPSGAA Trigger: TGCAGCACCTGAAGGTAGAAGGTCACTGTGGAAGCAGAAAGACATTAGCTTCAGTGACACTATTCTAAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR GCA 72 bp | AACTACTGGGTTTATGCTGAAAAGTCAGAGGACATCTaGACCATGCCCATGCATCTAAGAGCATACAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NYWVYAEKSEDI*TMPMHLRAYRK Trigger: CTTTCTGTATGCTCTTAGATGCATGGGCATGGTGCAGATGTCCTCTGACTTTTCAGCATAAACCCAGTAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | GAACCACTCTTTCGAAGCGATGAGAAGGGCTTGGCTTaGTATTTAGGCAATGTCTACTCAAAGGCAGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: EPLFRSDEKGLA*YLGNVYSKAVI Trigger: AATAACTGCCTTTGAGTAGACATTGCCTAAATACCAAGCCAAGCCCTTCTCATCGCTTCGAAAGAGTGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | ATGAGTTTAGGAATGGGGATGATCAGAAGAGCCACGTaGAAGTTTGTGTACAAGTTATGTAGGTCAAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: MSLGMGMIRRAT*KFVYKLCRSKW Trigger: CCACTTTGACCTACATAACTTGTACACAAACTTTCACGTGGCTCTTCTGATCATCCCCATTCCTAAACTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGGATATGCAATTTATATACATATTGACCGCCACATGTTCTGATGCAAAATGCACAGTGGTACAGCCATaGGTAAGACACACACATGCT | + |
|
Preference number: 3 (lower is better) Translates to: EDMQFIYILTATCSDAKCTVVQP*VRHTHA Trigger: AGCATGTGTGTGTCTTACCAATGGCTGTACCACTGT...GCATTTTGCATCAGAACATGTGGCGGTCAATATGTATATAAATTGCATATCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR GCA 72 bp | GGTACCAAGTTACACAGAAACACTTACAGGAAGTTATaGGGATGCTCATTTTACCCAAGTCAAATAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GTKLHRNTYRKL*GCSFYPSQIRE Trigger: TTCTCTTATTTGACTTGGGTAAAATGAGCATCCGCATAACTTCCTGTAAGTGTTTCTGTGTAACTTGGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033170.7 |
||
| 3UTR GCA 72 bp | AGAAATAAACACAAGCACGCAGAGTCAACTGATTTTTaGCAAATGAGTATACACTGGAGGAAATCACTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RNKHKHAESTDF*QMSIHWRKSLQ Trigger: TTGGAGTGATTTCCTCCAGTGTATACTCATTTGGCAAAAATCAGTTGACTCTGCGTGCTTGTGTTTATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | TCATACTGGGGGAACAGTGGATTACCAAGACATATGTaGAGCTACGGAATAAACAGAACTTATCTTCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SYWGNSGLPRHM*SYGINRTYLLK Trigger: TTTAAGAAGATAAGTTCTGTTTATTCCGTAGCTCCACATATGTCTTGGTAATCCACTGTTCCCCCAGTATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | CTTTGTCTCATGTTCTTTATTGGGTGGTGGGAGAAATaGATTAGATGTGTTTTCTCGAGGAACTCACTATTT | + |
|
Preference number: 3 (lower is better) Translates to: LCLMFFIGWWEK*IRCVFSRNSLF Trigger: AAATAGTGAGTTCCTCGAGAAAACACATCTAATTCATTTCTCCCACCACCCAATAAAGAACATGAGACAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | ACATCCAGGCTGAAGAAGTCTGTAAAACACATTGATTaGTTCAATAGACAGTTGATGCCAACTTTGTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TSRLKKSVKHID*FNRQLMPTLSH Trigger: ATGAGACAAAGTTGGCATCAACTGTCTATTGAATCAATCAATGTGTTTTACAGACTTCTTCAGCCTGGATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CCA 72 bp | GGCAGTAATCTCTCTCAAACACACTTCATTACAACTTaGATTGCAGTTTGGAAGCACTTTAACTTGTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GSNLSQTHFITT*IAVWKHFNLLV Trigger: AACTAACAAGTTAAAGTGCTTCCAAACTGCAATCCAAGTTGTAATGAAGTGTGTTTGAGAGAGATTACTGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR GCA 72 bp | AAGTTACACAGAAACACTTACAGGAAGTTATGCGGATaGTCATTTTACCCAAGTCAAATAAGAGAAATACGT | + |
|
Preference number: 3 (lower is better) Translates to: KLHRNTYRKLCG*SFYPSQIREIR Trigger: ACGTATTTCTCTTATTTGACTTGGGTAAAATGAGCATCCGCATAACTTCCTGTAAGTGTTTCTGTGTAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033170.7 |
||
| 3UTR TCA 72 bp | GTTCTGGAAGCAGCATTGTTAAAGGTAATGCAAATGTaGAGGAAAATGTCTTGTGAGGATATGCAATTTATA | + |
|
Preference number: 3 (lower is better) Translates to: VLEAALLKVMQM*RKMSCEDMQFI Trigger: TATAAATTGCATATCCTCACAAGACATTTTCCTTCACATTTGCATTACCTTTAACAATGCTGCTTCCAGAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR TCA 72 bp | GAGTTATTCAGTCACTATAATAAAAGATGTACAGTGTaGAACTGGCCCACTGGTAAAGAAAGTAAAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ELFSHYNKRCTV*NWPTGKESKGN Trigger: ATTTCCTTTACTTTCTTTACCAGTGGGCCAGTTTCACACTGTACATCTTTTATTATAGTGACTGAATAACTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGGAGGTCTGGGTCTCATTATGAGGGGGCTTTACAATGCTACTTCCAGGCCGCCTCGATGCGTTCGTaGCGAACTAGGCCCGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGRSGSHYEGALQCYFQAASMRS*RTRPVS Trigger: GCTCACGGGCCTAGTTCGCCACGAACGCATCGAGGC...GGCCTGGAAGTAGCATTGTAAAGCCCCCTCATAATGAGACCCAGACCTCCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033170.7 ENSMUST00000124482.3 ENSMUST00000176158.2 |
||
| CDS-3UTR GCA 90 bp | CGTGTGAGTCAGCAGGGAGGTCTGGGTCTCATTATGAGGGGGCTTTACAATGCTTGGTGCAGGTCCTGCTaGAGTCCCAGGAGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVSQQGGLGLIMRGLYNAWCRSC*SPRSSW Trigger: CCAGCTGCTCCTGGGACTGCAGCAGGACCTGCACCA...AGCATTGTAAAGCCCCCTCATAATGAGACCCAGACCTCCCTGCTGACTCACACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGCAGGGAGGTCTGGGTCTCATTATGAGGGGGCTTTACAATGCTACTTCGCCTCGATGCGTTCGTaGCGAACTAGGCCCGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESAGRSGSHYEGALQCYFASMRS*RTRPVS Trigger: GCTCACGGGCCTAGTTCGCCACGAACGCATCGAGGC...GAAGTAGCATTGTAAAGCCCCCTCATAATGAGACCCAGACCTCCCTGCTGACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033170.7 ENSMUST00000124482.3 ENSMUST00000176158.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGGGGCTTTACAATGCTACTTCCAGGCCTCACACACTACACGAGCTCCAAAAGTTCCGCAGCAGATaGATGCGGGACTCCGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: MRGLYNATSRPHTLHELQKFRSR*MRDSGP Trigger: GGGTCCGGAGTCCCGCATCCATCTGCTGCGGAACTT...TTGGAGCTCGTGTAGTGTGTGAGGCCTGGAAGTAGCATTGTAAAGCCCCCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033170.7 ENSMUST00000124482.3 ENSMUST00000176158.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTATCACCGCCATCTTGGCCCGATCTTGCTCCTTCCGATTCGGGATCTGTAAAGTTCCGCAGCAGATaGATGCGGGACTCCGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSPPSWPDLAPSDSGSVKFRSR*MRDSGP Trigger: GGGTCCGGAGTCCCGCATCCATCTGCTGCGGAACTT...TACAGATCCCGAATCGGAAGGAGCAAGATCGGGCCAAGATGGCGGTGATAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| CDS-3UTR CCA 90 bp | ACCACAGGTTGGAAGAACTTGGGAAAGCTGTCCTCTGGCCTCTATCTGCATTCTGCCTCGATGCGTTCGTaGCGAACTAGGCCCGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TTGWKNLGKLSSGLYLHSASMRS*RTRPVS Trigger: GCTCACGGGCCTAGTTCGCCACGAACGCATCGAGGC...AGAATGCAGATAGAGGCCAGAGGACAGCTTTCCCAAGTTCTTCCAACCTGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGGGAGGGAGGTAGTTCCCTTTATATTCTATCACCGCCATCTTGGCCCGGCATGGCTCGTTCGTTaGTGTCGCCCAGCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQGREVVPFIFYHRHLGPAWLVR*CRPAFH Trigger: ATGGAAAGCTGGGCGACACCAACGAACGAGCCATGC...CGGGCCAAGATGGCGGTGATAGAATATAAAGGGAACTACCTCCCTCCCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCTTGCGTCCTGGTTATGGTGCAGGTCCTGCTGCAGTCCCAGGAGCAGCTGTGGTACATAAAAGAATaGCCTGCCTTCAATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EACVLVMVQVLLQSQEQLWYIKE*PAFNLP Trigger: TGGCAGATTGAAGGCAGGGCATTCTTTTATGTACCA...CAGCTGCTCCTGGGACTGCAGCAGGACCTGCACCATAACCAGGACGCAAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| 3UTR CAA 72 bp | TCTTTGGTGTTTGAACTGTACAGGAGCTGTGGAGGCTaGCGTCCTGGTTATGGTGCAGGTCCTGCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLVFELYRSCGG*RPGYGAGPAAV Trigger: GACTGCAGCAGGACCTGCACCATAACCAGGACGCAAGCCTCCACAGCTCCTGTACAGTTCAAACACCAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGCAGGGAGGTCTGGGTCTCATTATGAGGGGGCTTTACAATGCTACTTCAGGGAGCACTCACTGTaGGCCAGAAGTCAGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: ESAGRSGSHYEGALQCYFREHSL*ARSQPY Trigger: GTATGGCTGACTTCTGGCTCACAGTGAGTGCTCCCT...GAAGTAGCATTGTAAAGCCCCCTCATAATGAGACCCAGACCTCCCTGCTGACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| 3UTR CAA 72 bp | TGCACCACTCTCCAGCTCCAGTTAAGTCTTTGGTGTTaGAACTGTACAGGAGCTGTGGAGGCTTGCGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CTTLQLQLSLWC*NCTGAVEACVL Trigger: CAGGACGCAAGCCTCCACAGCTCCTGTACAGTTCAAACACCAAAGACTTAACTGGAGCTGGAGAGTGGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| CDS-3UTR CCA 90 bp | GTTAAGTCTTTGGTGTTTGAACTGTACAGGAGCTGTGGAGGCTTGCGTCCTGGTGCATGGCTCGTTCGTTaGTGTCGCCCAGCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKSLVFELYRSCGGLRPGAWLVR*CRPAFH Trigger: ATGGAAAGCTGGGCGACACCAACGAACGAGCCATGC...ACCAGGACGCAAGCCTCCACAGCTCCTGTACAGTTCAAACACCAAAGACTTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCAATCCTTACCATGAGTATGGCAATATGTACCTTCAATCTCAGCACAAGGTTATGGTGCAGGTCCTaGTGCAGTCCCAGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPILTMSMAICTFNLSTRLWCRS*CSPRSS Trigger: GCTGCTCCTGGGACTGCAGCAGGACCTGCACCATAA...CCTTGTGCTGAGATTGAAGGTACATATTGCCATACTCATGGTAAGGATTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| CDS-3UTR CCA 90 bp | GCTCCTTCCGATTCGGGATCTGTAGCATTCTTGTGTAGTTCCCATTCTGACCTTAGTCAGCCATACGCATaGCTCGTTCGTTGGTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: APSDSGSVAFLCSSHSDLSQPYA*LVRWCR Trigger: GCGACACCAACGAACGAGCCATGCGTATGGCTGACT...AAGGTCAGAATGGGAACTACACAAGAATGCTACAGATCCCGAATCGGAAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTGGGATCAAGTCCTTCTCAGGAAGTTATGCGGATGCTCATTTTACCCAAGAGTCAGCCATACGCATaGCTCGTTCGTTGGTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ALGSSPSQEVMRMLILPKSQPYA*LVRWCR Trigger: GCGACACCAACGAACGAGCCATGCGTATGGCTGACT...CTTGGGTAAAATGAGCATCCGCATAACTTCCTGAGAAGGACTTGATCCCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176158.2 |
||
| 3UTR CAA 72 bp | ACACCTATGCACCACTCTCCAGCTCCAGTTAAGTCTTaGGTGTTTGAACTGTACAGGAGCTGTGGAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPMHHSPAPVKS*VFELYRSCGGL Trigger: CAAGCCTCCACAGCTCCTGTACAGTTCAAACACCAAAGACTTAACTGGAGCTGGAGAGTGGTGCATAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| 3UTR CAA 72 bp | GATTTCCTCTTTCTGGGTTCCCACAGAGGTCCACTTTaGGCAACAAAAGCTTCCAGGAAATTCCCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DFLFLGSHRGPL*ATKASRKFPAG Trigger: GCCTGCTGGGAATTTCCTGGAAGCTTTTGTTGCCAAAAGTGGACCTCTGTGGGAACCCAGAAAGAGGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CAA 72 bp | TCTGATGACCTGTCTTCCATACCTAGGAACCACAGGTaGGAAGAACTTGGGAAAGCTGTCCTCTGGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SDDLSSIPRNHR*EELGKAVLWPL Trigger: TAGAGGCCAGAGGACAGCTTTCCCAAGTTCTTCCAACCTGTGGTTCCTAGGTATGGAAGACAGGTCATCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| CDS-3UTR CCA 90 bp | CCCAATCCTTACCATGAGTATGGCAATATGTACCTTCAATCTCAGCACAAGGGAAGTCAGCCATACGCATaGCTCGTTCGTTGGTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PNPYHEYGNMYLQSQHKGSQPYA*LVRWCR Trigger: GCGACACCAACGAACGAGCCATGCGTATGGCTGACT...TCCCTTGTGCTGAGATTGAAGGTACATATTGCCATACTCATGGTAAGGATTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| CDS-3UTR CCA 90 bp | GTGCAAAGAGGATCGTGTGAGTCAGCAGGGAGGTCTGGGTCTCATTATGAGGGGCACTTTAAACAGCTTTaGGATCAAGTCCTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQRGSCESAGRSGSHYEGHFKQL*DQVLLC Trigger: ACAGAGAAGGACTTGATCCCAAAGCTGTTTAAAGTG...CCCCTCATAATGAGACCCAGACCTCCCTGCTGACTCACACGATCCTCTTTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CAA 72 bp | TGTCTTCCATACCTAGGAACCACAGGTTGGAAGAACTaGGGAAAGCTGTCCTCTGGCCTCTATCTGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLPYLGTTGWKN*GKLSSGLYLHS Trigger: AGAATGCAGATAGAGGCCAGAGGACAGCTTTCCCAAGTTCTTCCAACCTGTGGTTCCTAGGTATGGAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CAA 72 bp | GAGGAAGTGGCAACTTTCTTTCTAGCTGGTTGTGTGTaGTGCTGGGGACTGAACTCAGGACTTGATGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: EEVATFFLAGCV*CWGLNSGLDEC Trigger: GCATTCATCAAGTCCTGAGTTCAGTCCCCAGCACAACACACAACCAGCTAGAAAGAAAGTTGCCACTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| 3UTR CAA 72 bp | TGGGCAGTGGTGGGACACGCTTTTAATTCTAGTGTGTaGGAGCAGAAACAGGTGGATCTCTGTGAGTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WAVVGHAFNSSV*EQKQVDLCEFE Trigger: CTCAAACTCACAGAGATCCACCTGTTTCTGCTCCAACACACTAGAATTAAAAGCGTGTCCCACCACTGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| CDS-3UTR GCA 90 bp | CCAGTTAAGTCTTTGGTGTTTGAACTGTACAGGAGCTGTGGAGGCTTGCGTCCTCATAAAAGAATGCCCTaGCTTCAATCTGCCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PVKSLVFELYRSCGGLRPHKRMP*LQSARY Trigger: GTACCTGGCAGATTGAAGGCAGGGCATTCTTTTATG...AGGACGCAAGCCTCCACAGCTCCTGTACAGTTCAAACACCAAAGACTTAACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAGGGAGGTAGTTCCCTTTATATTCTATCACCGCCATCTTGGCCCGATCTTTGGTACATAAAAGAATaGCCTGCCTTCAATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEGGSSLYILSPPSWPDLWYIKE*PAFNLP Trigger: TGGCAGATTGAAGGCAGGGCATTCTTTTATGTACCA...AAGATCGGGCCAAGATGGCGGTGATAGAATATAAAGGGAACTACCTCCCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| CDS-3UTR CCA 90 bp | ATATTAAGACTTTTATCTTCTGTGCAAAGAGGATCGTGTGAGTCAGCAGGGAGGCTTGCGTCCTGGTTATaGTGCAGGTCCTGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILRLLSSVQRGSCESAGRLASWL*CRSCCS Trigger: ACTGCAGCAGGACCTGCACCATAACCAGGACGCAAG...CCTCCCTGCTGACTCACACGATCCTCTTTGCACAGAAGATAAAAGTCTTAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
||
| CDS-3UTR TCA 90 bp | TTCATATTAAGACTTTTATCTTCTGTGCAAAGAGGATCGTGTGAGTCAGCAGGGAGGGAGCACTCACTGTaGGCCAGAAGTCAGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: FILRLLSSVQRGSCESAGREHSL*ARSQPY Trigger: GTATGGCTGACTTCTGGCTCACAGTGAGTGCTCCCT...CCCTGCTGACTCACACGATCCTCTTTGCACAGAAGATAAAAGTCTTAATATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
||
| CDS-3UTR CCA 90 bp | TTCATATTAAGACTTTTATCTTCTGTGCAAAGAGGATCGTGTGAGTCAGCAGGGGCATGGCTCGTTCGTTaGTGTCGCCCAGCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FILRLLSSVQRGSCESAGAWLVR*CRPAFH Trigger: ATGGAAAGCTGGGCGACACCAACGAACGAGCCATGC...CCCTGCTGACTCACACGATCCTCTTTGCACAGAAGATAAAAGTCTTAATATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033170.7 ENSMUST00000124482.3 ENSMUST00000176158.2 |
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| 3UTR CAA 72 bp | TGTGGAGAACCACTCTTTCGAAGCGATGAGAAGGGCTaGGCTTGGTATTTAGGCAATGTCTACTCAAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: CGEPLFRSDEKG*AWYLGNVYSKA Trigger: TGCCTTTGAGTAGACATTGCCTAAATACCAAGCCAAGCCCTTCTCATCGCTTCGAAAGAGTGGTTCTCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CAA 72 bp | ATTAGATATGTAGTGCCCTGTACAACTGTGAGCTCCTaGACTGCTGATGCTTCACTTTTAGCCAGGGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: IRYVVPCTTVSS*TADASLLARVR Trigger: TCTGACCCTGGCTAAAAGTGAAGCATCAGCAGTCAAGGAGCTCACAGTTGTACAGGGCACTACATATCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CAA 72 bp | GTGCATGCATGTGGTGGTAAGCATGGTCAAAAGACATaGGTAGATATGTATGAAGATGCCAAGGTGAAACCT | + |
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Preference number: 4 (lower is better) Translates to: VHACGGKHGQKT*VDMYEDAKVKP Trigger: AGGTTTCACCTTGGCATCTTCATACATATCTACCAATGTCTTTTGACCATGCTTACCACCACATGCATGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| CDS-3UTR GCA 90 bp | TTCATATTAAGACTTTTATCTTCTGTGCAAAGAGGATCGTGTGAGTCAGCAGGGCATAAAAGAATGCCCTaGCTTCAATCTGCCAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: FILRLLSSVQRGSCESAGHKRMP*LQSARY Trigger: GTACCTGGCAGATTGAAGGCAGGGCATTCTTTTATG...CCCTGCTGACTCACACGATCCTCTTTGCACAGAAGATAAAAGTCTTAATATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| 3UTR CAA 72 bp | TATTTCAGTGTACTACATAAACACAGCAGGCATATCTaGTGTGACAAAGTTATGAGTTTAGGAATGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: YFSVLHKHSRHI*CDKVMSLGMGM Trigger: CATCCCCATTCCTAAACTCATAACTTTGTCACACAAGATATGCCTGCTGTGTTTATGTAGTACACTGAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| 3UTR CAA 72 bp | ACAGTAAAGAATAGAAAGTCAGTCAATGGGATGATATaGAACCAAGCGGGTTTTAAACATCAAACAAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: TVKNRKSVNGMI*NQAGFKHQTSN Trigger: ATTGCTTGTTTGATGTTTAAAACCCGCTTGGTTCAATATCATCCCATTGACTGACTTTCTATTCTTTACTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| CDS TCA 90 bp | CGCGTGCCCATGTCGCCTCGATGCGTTCGTGGCGAACTAGGCCCGTaGGCAAGTTCCGCAGCAGATGGATGCGGGACTCCGGACCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RVPMSPRCVRGELGP*ASSAADGCGTPDPG Trigger: GCCTGGGTCCGGAGTCCCGCATCCATCTGCTGCGGAACTTGCTCACGGGCCTAGTTCGCCACGAACGCATCGAGGCGACATGGGCACGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033170.7 ENSMUST00000124482.3 ENSMUST00000176158.2 ENSMUST00000176887.2 |
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| CDS CCA 90 bp | CCCCTCATCTCGTCCGCGCGTGCCCATGTCGCCTCGATGCGTTCGTaGCGAACTAGGCCCGTGAGCAAGTTCCGCAGCAGATGGATGCGG | + |
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Preference number: 5 (lower is better) Translates to: PLISSARAHVASMRS*RTRPVSKFRSRWMR Trigger: CCGCATCCATCTGCTGCGGAACTTGCTCACGGGCCTAGTTCGCCACGAACGCATCGAGGCGACATGGGCACGCGCGGACGAGATGAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033170.7 ENSMUST00000124482.3 ENSMUST00000176158.2 ENSMUST00000176887.2 |
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| CDS-3UTR CAA 90 bp | GTGCAAAGAGGATCGTGTGAGTCAGCAGGGAGGTCTGGGTCTCATTATGAGGGGCGCATGGCTCGTTCGTaGGTGTCGCCCAGCTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: VQRGSCESAGRSGSHYEGRMARS*VSPSFP Trigger: TGGAAAGCTGGGCGACACCAACGAACGAGCCATGCG...CCCCTCATAATGAGACCCAGACCTCCCTGCTGACTCACACGATCCTCTTTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033170.7 ENSMUST00000124482.3 ENSMUST00000176158.2 |
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| CDS-3UTR CAA 90 bp | TTTGAACTGTACAGGAGCTGTGGAGGCTTGCGTCCTGGTTATGGTGCAGGTCCTCGCATGGCTCGTTCGTaGGTGTCGCCCAGCTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: FELYRSCGGLRPGYGAGPRMARS*VSPSFP Trigger: TGGAAAGCTGGGCGACACCAACGAACGAGCCATGCG...AGGACCTGCACCATAACCAGGACGCAAGCCTCCACAGCTCCTGTACAGTTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 |
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| CDS TCA 90 bp | TCTCTAAGGATTCCTTCCTCACTAGCAGGTAGGGAGCACTCACTGTaGGCCAGAAGTCAGCCATACGCATGGCTCGTTCGTTGGTGTCGC | + |
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Preference number: 5 (lower is better) Translates to: SLRIPSSLAGREHSL*ARSQPYAWLVRWCR Trigger: GCGACACCAACGAACGAGCCATGCGTATGGCTGACTTCTGGCTCACAGTGAGTGCTCCCTACCTGCTAGTGAGGAAGGAATCCTTAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 ENSMUST00000176887.2 |
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| CDS-3UTR CAA 90 bp | GTAGGGTTCAAAACCATCTTCACAGGCTTTCCCACCACCCATTCAGGTACCAAGCGCATGGCTCGTTCGTaGGTGTCGCCCAGCTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: VGFKTIFTGFPTTHSGTKRMARS*VSPSFP Trigger: TGGAAAGCTGGGCGACACCAACGAACGAGCCATGCG...CTTGGTACCTGAATGGGTGGTGGGAAAGCCTGTGAAGATGGTTTTGAACCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033170.7 |
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| CDS-3UTR CAA 90 bp | CCCCCAATCCTTACCATGAGTATGGCAATATGTACCTTCAATCTCAGCACAAGGTTAAGTCTTTGGTGTTaGAACTGTACAGGAGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: PPILTMSMAICTFNLSTRLSLWC*NCTGAV Trigger: CACAGCTCCTGTACAGTTCAAACACCAAAGACTTAA...CCTTGTGCTGAGATTGAAGGTACATATTGCCATACTCATGGTAAGGATTGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124482.3 |
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| CDS CCA 72 bp | TGGCGAACTAGGCCCGTGAGCAAGTTCCGCAGCAGATaGATGCGGGACTCCGGACCCAGGCCCAGGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: WRTRPVSKFRSR*MRDSGPRPRRR Trigger: CCGCCGCCTGGGCCTGGGTCCGGAGTCCCGCATCCATCTGCTGCGGAACTTGCTCACGGGCCTAGTTCGCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033170.7 ENSMUST00000124482.3 ENSMUST00000176158.2 ENSMUST00000176887.2 |
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| CDS CCA 72 bp | TCGTCCGCGCGTGCCCATGTCGCCTCGATGCGTTCGTaGCGAACTAGGCCCGTGAGCAAGTTCCGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SSARAHVASMRS*RTRPVSKFRSR Trigger: TCTGCTGCGGAACTTGCTCACGGGCCTAGTTCGCCACGAACGCATCGAGGCGACATGGGCACGCGCGGACGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033170.7 ENSMUST00000124482.3 ENSMUST00000176158.2 ENSMUST00000176887.2 |
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| CDS TCA 72 bp | ATGTCGCCTCGATGCGTTCGTGGCGAACTAGGCCCGTaGGCAAGTTCCGCAGCAGATGGATGCGGGACTCCG | + |
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Preference number: 6 (lower is better) Translates to: MSPRCVRGELGP*ASSAADGCGTP Trigger: CGGAGTCCCGCATCCATCTGCTGCGGAACTTGCTCACGGGCCTAGTTCGCCACGAACGCATCGAGGCGACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033170.7 ENSMUST00000124482.3 ENSMUST00000176158.2 ENSMUST00000176887.2 |
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| CDS TCA 72 bp | CTCGTTCGTTGGTGTCGCCCAGCTTTCCATAATCGATaGGCTTCTCCGCGTAGCCCCTCATCTCGTCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: LVRWCRPAFHNR*ASPRSPSSRPR Trigger: GCGCGGACGAGATGAGGGGCTACGCGGAGAAGCTCATCGATTATGGAAAGCTGGGCGACACCAACGAACGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033170.7 ENSMUST00000124482.3 ENSMUST00000176158.2 ENSMUST00000176887.2 |
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| CDS TCA 72 bp | ATTCCTTCCTCACTAGCAGGTAGGGAGCACTCACTGTaGGCCAGAAGTCAGCCATACGCATGGCTCGTTCGT | + |
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Preference number: 6 (lower is better) Translates to: IPSSLAGREHSL*ARSQPYAWLVR Trigger: ACGAACGAGCCATGCGTATGGCTGACTTCTGGCTCACAGTGAGTGCTCCCTACCTGCTAGTGAGGAAGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033170.7 ENSMUST00000176158.2 ENSMUST00000176887.2 |
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