Pregenerated sensors for MRPL16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024683Ensembl transcript IDs: ENSMUST00000167199.3
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAATCAACCAGGTGACACAGTTTTTCAGAAGTCACTCACTCATGTaGTTAGTTAGGATCCAAGAACCAGCAAAGACCCTCAGGACAGTA | + |
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Preference number: 1 (lower is better) Translates to: RINQVTQFFRSHSLM*LVRIQEPAKTLRTV Trigger: TACTGTCCTGAGGGTCTTTGCTGGTTCTTGGATCCTAACTAAGCACATGAGTGAGTGACTTCTGAAAAACTGTGTCACCTGGTTGATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGCCTTGAACACAAATGAGATCCACCCATCTTTGCCTCCTGAGTGCTGGGACTGTCGCTCAGGAGGCTaGGCACATGTTCCTCGCGCT | + |
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Preference number: 2 (lower is better) Translates to: LALNTNEIHPSLPPECWDCRSGG*AHVPRA Trigger: AGCGCGAGGAACATGTGCGCAGCCTCCTGAGCGACA...GTCCCAGCACTCAGGAGGCAAAGATGGGTGGATCTCATTTGTGTTCAAGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| 3UTR TCA 72 bp | TTGAGACAGGATCTTGCTTGTAGATGTGACTGGCCTTaGACACAAATGAGATCCACCCATCTTTGCCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LRQDLACRCDWP*TQMRSTHLCLL Trigger: CAGGAGGCAAAGATGGGTGGATCTCATTTGTGTTCAAGGCCAGTCACATCTACAAGCAAGATCCTGTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| 3UTR GCA 72 bp | CAGGTGACACAGTTTTTCAGAAGTCACTCACTCATGTaGTTAGTTAGGATCCAAGAACCAGCAAAGACCCTC | + |
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Preference number: 3 (lower is better) Translates to: QVTQFFRSHSLM*LVRIQEPAKTL Trigger: GAGGGTCTTTGCTGGTTCTTGGATCCTAACTAAGCACATGAGTGAGTGACTTCTGAAAAACTGTGTCACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CCA 90 bp | CAAGAACCAGCAAAGACCCTCAGGACAGTAAAGGCGCAGATTGTCGCTCAGGAGTCTTCAGACCAGCACTaGTGGGAAGGGCTGCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: QEPAKTLRTVKAQIVAQESSDQH*WEGLPK Trigger: CTTGGGCAGCCCTTCCCACCAGTGCTGGTCTGAAGA...CTCCTGAGCGACAATCTGCGCCTTTACTGTCCTGAGGGTCTTTGCTGGTTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CCA 90 bp | CTGGCCTTGAACACAAATGAGATCCACCCATCTTTGCCTCCTGAGTGCTGGGACTCAGACCAGCACTGGTaGGAAGGGCTGCCCAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LALNTNEIHPSLPPECWDSDQHW*EGLPKN Trigger: ATTCTTGGGCAGCCCTTCCCACCAGTGCTGGTCTGA...GTCCCAGCACTCAGGAGGCAAAGATGGGTGGATCTCATTTGTGTTCAAGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR TCA 90 bp | ATGAGATCCACCCATCTTTGCCTCCTGAGTGCTGGGACAGCTGGCTATCAAACTGGCTGCCCAAGAATCTaGAAAGTGCATCCGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: MRSTHLCLLSAGTAGYQTGCPRI*KVHPQE Trigger: CTCCTGCGGATGCACTTTTCAGATTCTTGGGCAGCC...AGTTTGATAGCCAGCTGTCCCAGCACTCAGGAGGCAAAGATGGGTGGATCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CCA 90 bp | ACCCATCTTTGCCTCCTGAGTGCTGGGACAGCTGGCTATCAAACTGTCCTTAATGGGCTTGAAAGGGGCTaGCACTCGCCAGATGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: THLCLLSAGTAGYQTVLNGLERG*HSPDGK Trigger: TTTGCCATCTGGCGAGTGCCAGCCCCTTTCAAGCCC...ATTAAGGACAGTTTGATAGCCAGCTGTCCCAGCACTCAGGAGGCAAAGATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR GCA 90 bp | GAGATCCACCCATCTTTGCCTCCTGAGTGCTGGGACAGCTGGCTATCAAACTGTTGGGCATGTAGAATTTaGCCCAGTATCGCCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: EIHPSLPPECWDSWLSNCWACRI*PSIALS Trigger: AGAAAGGGCGATACTGGGGCAAATTCTACATGCCCA...ACAGTTTGATAGCCAGCTGTCCCAGCACTCAGGAGGCAAAGATGGGTGGATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CCA 90 bp | CCAGCAAAGACCCTCAGGACAGTAAAGGCGCAGATTGTCGCTCAGGAGGCTGCGTGGACCTTTCAGGGATaGAGACATTTTCAAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: PAKTLRTVKAQIVAQEAAWTFQG*RHFQKL Trigger: CAACTTTTGAAAATGTCTCCATCCCTGAAAGGTCCA...CGCAGCCTCCTGAGCGACAATCTGCGCCTTTACTGTCCTGAGGGTCTTTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CCA 90 bp | CAAGAACCAGCAAAGACCCTCAGGACAGTAAAGGCGCAGATTGTCGCTCAGGAGCAAACATGTTGGCAGTaGCTATGTGCTCAAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QEPAKTLRTVKAQIVAQEQTCWQ*LCAQRS Trigger: GGACCTTTGAGCACATAGCCACTGCCAACATGTTTG...CTCCTGAGCGACAATCTGCGCCTTTACTGTCCTGAGGGTCTTTGCTGGTTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR GCA 90 bp | CTCATGTGCTTAGTTAGGATCCAAGAACCAGCAAAGACCCTCAGGACAGTAAAGCAAGAATCTGAAAAGTaGATCCGCAGGAGCGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: LMCLVRIQEPAKTLRTVKQESEK*IRRSGA Trigger: CGCGCCGCTCCTGCGGATGCACTTTTCAGATTCTTG...CTTTACTGTCCTGAGGGTCTTTGCTGGTTCTTGGATCCTAACTAAGCACATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR TCA 90 bp | CAAGAACCAGCAAAGACCCTCAGGACAGTAAAGGCGCAGATTGTCGCTCAGGAGAGTTCTCTCTCTCTTTaGTTTTGGTGCATCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: QEPAKTLRTVKAQIVAQESSLSL*FWCILS Trigger: AGAGAGGATGCACCAAAATCAAAGAGAGAGAGAACT...CTCCTGAGCGACAATCTGCGCCTTTACTGTCCTGAGGGTCTTTGCTGGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR GCA 90 bp | CAAATGAGATCCACCCATCTTTGCCTCCTGAGTGCTGGGACAGCTGGCTATCAATCAGGAATTTCCGTATaGCAAACATGTTGGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QMRSTHLCLLSAGTAGYQSGISV*QTCWQW Trigger: CCACTGCCAACATGTTTGGCATACGGAAATTCCTGA...TTGATAGCCAGCTGTCCCAGCACTCAGGAGGCAAAGATGGGTGGATCTCATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CCA 90 bp | CAAATGAGATCCACCCATCTTTGCCTCCTGAGTGCTGGGACAGCTGGCTATCAACTGCGTCAAGTCATATaGGCTCAGGAATTTCCGTAT | + |
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Preference number: 4 (lower is better) Translates to: QMRSTHLCLLSAGTAGYQLRQVI*AQEFPY Trigger: ATACGGAAATTCCTGAGCCCATATGACTTGACGCAG...TTGATAGCCAGCTGTCCCAGCACTCAGGAGGCAAAGATGGGTGGATCTCATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CCA 90 bp | ACCCATCTTTGCCTCCTGAGTGCTGGGACAGCTGGCTATCAAACTGTCCTTAATAAGGTCCAGGGGTTTTaGTTGTTAAGTTCTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: THLCLLSAGTAGYQTVLNKVQGF*LLSSLS Trigger: AGAGAGAGAACTTAACAACCAAAACCCCTGGACCTT...ATTAAGGACAGTTTGATAGCCAGCTGTCCCAGCACTCAGGAGGCAAAGATGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CCA 90 bp | CAAGAACCAGCAAAGACCCTCAGGACAGTAAAGGCGCAGATTGTCGCTCAGGAGTACTTTTGGCACAAGTaGGACTCTTTCAACAAATTT | + |
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Preference number: 4 (lower is better) Translates to: QEPAKTLRTVKAQIVAQEYFWHK*DSFNKF Trigger: AAATTTGTTGAAAGAGTCCCACTTGTGCCAAAAGTA...CTCCTGAGCGACAATCTGCGCCTTTACTGTCCTGAGGGTCTTTGCTGGTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR GCA 90 bp | CAAACTTTAATTAGAATCAACCAGGTGACACAGTTTTTCAGAAGTCACTCACTCTTGGCAGTGGCTATGTaGTCAAAGGTCCAGGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: QTLIRINQVTQFFRSHSLLAVAM*SKVQGF Trigger: AAACCCCTGGACCTTTGAGCACATAGCCACTGCCAA...GAGTGAGTGACTTCTGAAAAACTGTGTCACCTGGTTGATTCTAATTAAAGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CCA 90 bp | CAAACTTTAATTAGAATCAACCAGGTGACACAGTTTTTCAGAAGTCACTCACTCCTGGCACTCGCCAGATaGCAAACATGTTCTTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: QTLIRINQVTQFFRSHSLLALAR*QTCSWD Trigger: ATCCCAAGAACATGTTTGCCATCTGGCGAGTGCCAG...GAGTGAGTGACTTCTGAAAAACTGTGTCACCTGGTTGATTCTAATTAAAGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CCA 90 bp | CAAACTTTAATTAGAATCAACCAGGTGACACAGTTTTTCAGAAGTCACTCACTCTTCTCTTCTTACTTTTaGCACAAGTGGGACTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QTLIRINQVTQFFRSHSLFSSYF*HKWDSF Trigger: GAAAGAGTCCCACTTGTGCCAAAAGTAAGAAGAGAA...GAGTGAGTGACTTCTGAAAAACTGTGTCACCTGGTTGATTCTAATTAAAGTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS GCA 90 bp | TTCAGACCAGCACTGGTGGGAAGGGCTGCCCAAGAATCTGAAAAGTaGATCCGCAGGAGCGGCGCGGGGACGCGCGTCAACAGCCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: FRPALVGRAAQESEK*IRRSGAGTRVNSLH Trigger: GTGGAGGCTGTTGACGCGCGTCCCCGCGCCGCTCCTGCGGATGCACTTTTCAGATTCTTGGGCAGCCCTTCCCACCAGTGCTGGTCTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CAA 90 bp | CCAGCAAAGACCCTCAGGACAGTAAAGGCGCAGATTGTCGCTCAGGAGGCTGCGTACGGCTCACAGCCTTaGCCGGAAAGGGTAACTTGT | + |
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Preference number: 5 (lower is better) Translates to: PAKTLRTVKAQIVAQEAAYGSQP*PERVTC Trigger: ACAAGTTACCCTTTCCGGCAAAGGCTGTGAGCCGTA...CGCAGCCTCCTGAGCGACAATCTGCGCCTTTACTGTCCTGAGGGTCTTTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CAA 90 bp | CTGGCCTTGAACACAAATGAGATCCACCCATCTTTGCCTCCTGAGTGCTGGGACAGTCAGTGGCTTCAGTaGAAGGCCCTCGTATGTCCT | + |
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Preference number: 5 (lower is better) Translates to: LALNTNEIHPSLPPECWDSQWLQ*KALVCP Trigger: AGGACATACGAGGGCCTTCAACTGAAGCCACTGACT...GTCCCAGCACTCAGGAGGCAAAGATGGGTGGATCTCATTTGTGTTCAAGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS GCA 90 bp | ATCGCCCTTTCTGCGTCAAGTCATATGGGCTCAGGAATTTCCGTATaGCAAACATGTTGGCAGTGGCTATGTGCTCAAAGGTCCAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: IALSASSHMGSGISV*QTCWQWLCAQRSRG Trigger: ACCCCTGGACCTTTGAGCACATAGCCACTGCCAACATGTTTGGCATACGGAAATTCCTGAGCCCATATGACTTGACGCAGAAAGGGCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CAA 90 bp | CAAATGAGATCCACCCATCTTTGCCTCCTGAGTGCTGGGACAGCTGGCTATCAACGTATGCCAAACATGTaGGCAGTGGCTATGTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: QMRSTHLCLLSAGTAGYQRMPNM*AVAMCS Trigger: TGAGCACATAGCCACTGCCAACATGTTTGGCATACG...TTGATAGCCAGCTGTCCCAGCACTCAGGAGGCAAAGATGGGTGGATCTCATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CCA 90 bp | AAATTTAAGCTTGGACCTTTCAGGGATGGAGACATTTTCAAAAGTTaGAACTGGGAGGAGCGTCTTCAGACCAGCACTGGTGGGAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: KFKLGPFRDGDIFKS*NWEERLQTSTGGKG Trigger: GCCCTTCCCACCAGTGCTGGTCTGAAGACGCTCCTCCCAGTTCCAACTTTTGAAAATGTCTCCATCCCTGAAAGGTCCAAGCTTAAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CAA 90 bp | CAAATGAGATCCACCCATCTTTGCCTCCTGAGTGCTGGGACAGCTGGCTATCAAAGACATTTTCAAAAGTaGGAACTGGGAGGAGCGTCT | + |
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Preference number: 5 (lower is better) Translates to: QMRSTHLCLLSAGTAGYQRHFQK*ELGGAS Trigger: AGACGCTCCTCCCAGTTCCAACTTTTGAAAATGTCT...TTGATAGCCAGCTGTCCCAGCACTCAGGAGGCAAAGATGGGTGGATCTCATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS GCA 90 bp | GGGCTCAGGAATTTCCGTATGCCAAACATGTTGGCAGTGGCTATGTaGTCAAAGGTCCAGGGGTTTTGGTTGTTAAGTTCTCTCTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: GLRNFRMPNMLAVAM*SKVQGFWLLSSLSL Trigger: AAGAGAGAGAGAACTTAACAACCAAAACCCCTGGACCTTTGAGCACATAGCCACTGCCAACATGTTTGGCATACGGAAATTCCTGAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CCA 90 bp | CATGTAGAATTTGCCCCAGTATCGCCCTTTCTGCGTCAAGTCATATaGGCTCAGGAATTTCCGTATGCCAAACATGTTGGCAGTGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: HVEFAPVSPFLRQVI*AQEFPYAKHVGSGY Trigger: ATAGCCACTGCCAACATGTTTGGCATACGGAAATTCCTGAGCCCATATGACTTGACGCAGAAAGGGCGATACTGGGGCAAATTCTACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CAA 90 bp | ATGAGATCCACCCATCTTTGCCTCCTGAGTGCTGGGACAGCTGGCTATCAAACTAAGTTCTCTCTCTCTTaGATTTTGGTGCATCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: MRSTHLCLLSAGTAGYQTKFSLS*ILVHPL Trigger: GAGAGGATGCACCAAAATCAAAGAGAGAGAGAACTT...AGTTTGATAGCCAGCTGTCCCAGCACTCAGGAGGCAAAGATGGGTGGATCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS TCA 90 bp | TCTAGAGTCTTACGGCTCACAGCCTTTGCCGGAAAGGGTAACTTGTaGGCAACTTGGTTCAGGATACCTTTTACCTCTTCAAATTCACAC | + |
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Preference number: 5 (lower is better) Translates to: SRVLRLTAFAGKGNL*ATWFRIPFTSSNSH Trigger: GTGTGAATTTGAAGAGGTAAAAGGTATCCTGAACCAAGTTGCTCACAAGTTACCCTTTCCGGCAAAGGCTGTGAGCCGTAAGACTCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CAA 90 bp | TGTAAGCAACTGAAACTGACCAAAGAGAAGTTGTACCCTGAGGTTACATTCAAACGCTGCCCAACACCTTaGCGAGTGATGGGCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: CKQLKLTKEKLYPEVTFKRCPTP*RVMGLK Trigger: TTTCAAGCCCATCACTCGCAAAGGTGTTGGGCAGCG...TTTGAATGTAACCTCAGGGTACAACTTCTCTTTGGTCAGTTTCAGTTGCTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CAA 90 bp | CTCATGTGCTTAGTTAGGATCCAAGAACCAGCAAAGACCCTCAGGACAGTAAAGAAAGGTCCAGGGGTTTaGGTTGTTAAGTTCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LMCLVRIQEPAKTLRTVKKGPGV*VVKFSL Trigger: GAGAGAGAACTTAACAACCAAAACCCCTGGACCTTT...CTTTACTGTCCTGAGGGTCTTTGCTGGTTCTTGGATCCTAACTAAGCACATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CAA 90 bp | TGTAAGCAACTGAAACTGACCAAAGAGAAGTTGTACCCTGAGGTTACATTCAAAGTCCAGGGGTTTTGGTaGTTAAGTTCTCTCTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: CKQLKLTKEKLYPEVTFKVQGFW*LSSLSL Trigger: AAGAGAGAGAGAACTTAACAACCAAAACCCCTGGAC...TTTGAATGTAACCTCAGGGTACAACTTCTCTTTGGTCAGTTTCAGTTGCTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CCA 90 bp | AGGCCCTCGTATGTCCTTCAAATTTTTAGGTTCTCTTCTTACTTTTaGCACAAGTGGGACTCTTTCAACAAATTTAAGCTTGGACCTTTC | + |
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Preference number: 5 (lower is better) Translates to: RPSYVLQIFRFSSYF*HKWDSFNKFKLGPF Trigger: GAAAGGTCCAAGCTTAAATTTGTTGAAAGAGTCCCACTTGTGCCAAAAGTAAGAAGAGAACCTAAAAATTTGAAGGACATACGAGGGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CAA 90 bp | TGTAAGCAACTGAAACTGACCAAAGAGAAGTTGTACCCTGAGGTTACATTCAAAGTTCTCTTCTTACTTTaGGCACAAGTGGGACTCTTT | + |
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Preference number: 5 (lower is better) Translates to: CKQLKLTKEKLYPEVTFKVLFLL*AQVGLF Trigger: AAAGAGTCCCACTTGTGCCAAAAGTAAGAAGAGAAC...TTTGAATGTAACCTCAGGGTACAACTTCTCTTTGGTCAGTTTCAGTTGCTTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS-3UTR CAA 90 bp | CAAACTTTAATTAGAATCAACCAGGTGACACAGTTTTTCAGAAGTCACTCACTCATGGCAAACATGTTCTaGGGATCCATAAAGCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: QTLIRINQVTQFFRSHSLMANMF*GSIKRL Trigger: CAACCGCTTTATGGATCCCAAGAACATGTTTGCCAT...GAGTGAGTGACTTCTGAAAAACTGTGTCACCTGGTTGATTCTAATTAAAGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CCA 90 bp | TATGTCCTTCAAATTTTTAGGTTCTCTTCTTACTTTTGGCACAAGTaGGACTCTTTCAACAAATTTAAGCTTGGACCTTTCAGGGATGGA | + |
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Preference number: 5 (lower is better) Translates to: YVLQIFRFSSYFWHK*DSFNKFKLGPFRDG Trigger: TCCATCCCTGAAAGGTCCAAGCTTAAATTTGTTGAAAGAGTCCCACTTGTGCCAAAAGTAAGAAGAGAACCTAAAAATTTGAAGGACATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS GCA 72 bp | GCACTGGTGGGAAGGGCTGCCCAAGAATCTGAAAAGTaGATCCGCAGGAGCGGCGCGGGGACGCGCGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: ALVGRAAQESEK*IRRSGAGTRVN Trigger: GTTGACGCGCGTCCCCGCGCCGCTCCTGCGGATGCACTTTTCAGATTCTTGGGCAGCCCTTCCCACCAGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CCA 72 bp | TTGGAACTGGGAGGAGCGTCTTCAGACCAGCACTGGTaGGAAGGGCTGCCCAAGAATCTGAAAAGTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: LELGGASSDQHW*EGLPKNLKSAS Trigger: GGATGCACTTTTCAGATTCTTGGGCAGCCCTTCCCACCAGTGCTGGTCTGAAGACGCTCCTCCCAGTTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CCA 72 bp | AAGTTGGAACTGGGAGGAGCGTCTTCAGACCAGCACTaGTGGGAAGGGCTGCCCAAGAATCTGAAAAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: KLELGGASSDQH*WEGLPKNLKSA Trigger: TGCACTTTTCAGATTCTTGGGCAGCCCTTCCCACCAGTGCTGGTCTGAAGACGCTCCTCCCAGTTCCAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CCA 72 bp | CCTTTCAGGGATGGAGACATTTTCAAAAGTTGGAACTaGGAGGAGCGTCTTCAGACCAGCACTGGTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PFRDGDIFKSWN*EERLQTSTGGK Trigger: CTTCCCACCAGTGCTGGTCTGAAGACGCTCCTCCCAGTTCCAACTTTTGAAAATGTCTCCATCCCTGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CAA 72 bp | GCTTGGACCTTTCAGGGATGGAGACATTTTCAAAAGTaGGAACTGGGAGGAGCGTCTTCAGACCAGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: AWTFQGWRHFQK*ELGGASSDQHW Trigger: CCAGTGCTGGTCTGAAGACGCTCCTCCCAGTTCCAACTTTTGAAAATGTCTCCATCCCTGAAAGGTCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CCA 72 bp | CTTGGACCTTTCAGGGATGGAGACATTTTCAAAAGTTaGAACTGGGAGGAGCGTCTTCAGACCAGCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: LGPFRDGDIFKS*NWEERLQTSTG Trigger: ACCAGTGCTGGTCTGAAGACGCTCCTCCCAGTTCCAACTTTTGAAAATGTCTCCATCCCTGAAAGGTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CCA 72 bp | GGCTCAGGAATTTCCGTATGCCAAACATGTTGGCAGTaGCTATGTGCTCAAAGGTCCAGGGGTTTTGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: GSGISVCQTCWQ*LCAQRSRGFGC Trigger: ACAACCAAAACCCCTGGACCTTTGAGCACATAGCCACTGCCAACATGTTTGGCATACGGAAATTCCTGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CCA 72 bp | TTTGCCCCAGTATCGCCCTTTCTGCGTCAAGTCATATaGGCTCAGGAATTTCCGTATGCCAAACATGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: FAPVSPFLRQVI*AQEFPYAKHVG Trigger: GCCAACATGTTTGGCATACGGAAATTCCTGAGCCCATATGACTTGACGCAGAAAGGGCGATACTGGGGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS GCA 72 bp | TCTGCGTCAAGTCATATGGGCTCAGGAATTTCCGTATaGCAAACATGTTGGCAGTGGCTATGTGCTCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: SASSHMGSGISV*QTCWQWLCAQR Trigger: CCTTTGAGCACATAGCCACTGCCAACATGTTTGGCATACGGAAATTCCTGAGCCCATATGACTTGACGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CCA 72 bp | CATATGGGCTCAGGAATTTCCGTATGCCAAACATGTTaGCAGTGGCTATGTGCTCAAAGGTCCAGGGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: HMGSGISVCQTC*QWLCAQRSRGF Trigger: AAAACCCCTGGACCTTTGAGCACATAGCCACTGCCAACATGTTTGGCATACGGAAATTCCTGAGCCCATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CAA 72 bp | TCATATGGGCTCAGGAATTTCCGTATGCCAAACATGTaGGCAGTGGCTATGTGCTCAAAGGTCCAGGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SYGLRNFRMPNM*AVAMCSKVQGF Trigger: AAACCCCTGGACCTTTGAGCACATAGCCACTGCCAACATGTTTGGCATACGGAAATTCCTGAGCCCATATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CAA 90 bp | TGCGTCAAGTCATATGGGCTCAGGAATTTCCGTATGCCAAACATGTaGGCAGTGGCTATGTGCTCAAAGGTCCAGGGGTTTTGGTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: CVKSYGLRNFRMPNM*AVAMCSKVQGFWLL Trigger: TAACAACCAAAACCCCTGGACCTTTGAGCACATAGCCACTGCCAACATGTTTGGCATACGGAAATTCCTGAGCCCATATGACTTGACGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CAA 90 bp | TTTGATTTTGGTGCATCCTCTCTAGAGTCTTACGGCTCACAGCCTTaGCCGGAAAGGGTAACTTGTGAGCAACTTGGTTCAGGATACCTT | + |
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Preference number: 6 (lower is better) Translates to: FDFGASSLESYGSQP*PERVTCEQLGSGYL Trigger: AAGGTATCCTGAACCAAGTTGCTCACAAGTTACCCTTTCCGGCAAAGGCTGTGAGCCGTAAGACTCTAGAGAGGATGCACCAAAATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CAA 90 bp | GCCAAACATGTTGGCAGTGGCTATGTGCTCAAAGGTCCAGGGGTTTaGGTTGTTAAGTTCTCTCTCTCTTTGATTTTGGTGCATCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: AKHVGSGYVLKGPGV*VVKFSLSLILVHPL Trigger: GAGAGGATGCACCAAAATCAAAGAGAGAGAGAACTTAACAACCAAAACCCCTGGACCTTTGAGCACATAGCCACTGCCAACATGTTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CAA 72 bp | GTTGGCAGTGGCTATGTGCTCAAAGGTCCAGGGGTTTaGGTTGTTAAGTTCTCTCTCTCTTTGATTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: VGSGYVLKGPGV*VVKFSLSLILV Trigger: CACCAAAATCAAAGAGAGAGAGAACTTAACAACCAAAACCCCTGGACCTTTGAGCACATAGCCACTGCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS GCA 72 bp | AATTTCCGTATGCCAAACATGTTGGCAGTGGCTATGTaGTCAAAGGTCCAGGGGTTTTGGTTGTTAAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: NFRMPNMLAVAM*SKVQGFWLLSS Trigger: AGAACTTAACAACCAAAACCCCTGGACCTTTGAGCACATAGCCACTGCCAACATGTTTGGCATACGGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CAA 72 bp | CAGATGGCAAACATGTTCTTGGGATCCATAAAGCGGTaGATTGTCAAGCGCATCATTTCAAAATGGCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: QMANMFLGSIKR*IVKRIISKWPQ Trigger: TTGGGGCCATTTTGAAATGATGCGCTTGACAATCAACCGCTTTATGGATCCCAAGAACATGTTTGCCATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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| CDS CAA 72 bp | TTTGGCACAAGTGGGACTCTTTCAACAAATTTAAGCTaGGACCTTTCAGGGATGGAGACATTTTCAAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: FGTSGTLSTNLS*DLSGMETFSKV Trigger: AACTTTTGAAAATGTCTCCATCCCTGAAAGGTCCAAGCTTAAATTTGTTGAAAGAGTCCCACTTGTGCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167199.3 |
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