Pregenerated sensors for MRPL15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033845Ensembl transcript IDs: ENSMUST00000045689.14, ENSMUST00000130201.8, ENSMUST00000146665.3, ENSMUST00000156816.7
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTCTTCCTGGGAAGGCAGGGGCTCTGAGACCTGCAAATGTACACTaGAGTACCAAAGGAAAGCCTCCTGCACAACTAGGCGGCAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: SLPGKAGALRPANVH*STKGKPPAQLGGKA Trigger: TGCCTTGCCGCCTAGTTGTGCAGGAGGCTTTCCTTTGGTACTGCAGTGTACATTTGCAGGTCTCAGAGCCCCTGCCTTCCCAGGAAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR TCA 90 bp | CCTCTCACTTCCCATGAAGAAGTCTTCCTGGGAAGGCAGGGGCTCTaGGACCTGCAAATGTACACTGCAGTACCAAAGGAAAGCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PLTSHEEVFLGRQGL*DLQMYTAVPKESLL Trigger: CAGGAGGCTTTCCTTTGGTACTGCAGTGTACATTTGCAGGTCTCAGAGCCCCTGCCTTCCCAGGAAGACTTCTTCATGGGAAGTGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR GCA 90 bp | CTTCCCATGAAGAAGTCTTCCTGGGAAGGCAGGGGCTCTGAGACCTaGAAATGTACACTGCAGTACCAAAGGAAAGCCTCCTGCACAACT | + |
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Preference number: 1 (lower is better) Translates to: LPMKKSSWEGRGSET*KCTLQYQRKASCTT Trigger: AGTTGTGCAGGAGGCTTTCCTTTGGTACTGCAGTGTACATTTGCAGGTCTCAGAGCCCCTGCCTTCCCAGGAAGACTTCTTCATGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR GCA 90 bp | TCTGAGACCTGCAAATGTACACTGCAGTACCAAAGGAAAGCCTCCTaGACAACTAGGCGGCAAGGCAATAGCTTTCCTAGGGCTACAGCA | + |
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Preference number: 1 (lower is better) Translates to: SETCKCTLQYQRKAS*TTRRQGNSFPRATA Trigger: TGCTGTAGCCCTAGGAAAGCTATTGCCTTGCCGCCTAGTTGTGCAGGAGGCTTTCCTTTGGTACTGCAGTGTACATTTGCAGGTCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR CCA 90 bp | CTTCAGATGACTAATTTCCTCTCACTTCCCATGAAGAAGTCTTCCTaGGAAGGCAGGGGCTCTGAGACCTGCAAATGTACACTGCAGTAC | + |
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Preference number: 1 (lower is better) Translates to: LQMTNFLSLPMKKSS*EGRGSETCKCTLQY Trigger: GTACTGCAGTGTACATTTGCAGGTCTCAGAGCCCCTGCCTTCCCAGGAAGACTTCTTCATGGGAAGTGAGAGGAAATTAGTCATCTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR TCA 90 bp | CTAAGTCTTTATGAGCTAGGAAGGAAACCGAGAGCCTGTACAGGCTaGAGTGCAACTCCAGCACTGTTTAGGTTTTACACTGTGTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LSLYELGRKPRACTG*SATPALFRFYTVWR Trigger: CCTCCACACAGTGTAAAACCTAAACAGTGCTGGAGTTGCACTTCAGCCTGTACAGGCTCTCGGTTTCCTTCCTAGCTCATAAAGACTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
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| 3UTR GCA 90 bp | GAGTATCTTGCCGAAAATCCATGGAAGTCAGAAGAGTGCATCAAGTaGCCTGGAATTGGGAAAACAGATGGTTGTGAGCTACCATGCAGC | + |
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Preference number: 1 (lower is better) Translates to: EYLAENPWKSEECIK*PGIGKTDGCELPCS Trigger: GCTGCATGGTAGCTCACAACCATCTGTTTTCCCAATTCCAGGGCACTTGATGCACTCTTCTGACTTCCATGGATTTTCGGCAAGATACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR CCA 90 bp | ACCTGTATGCCACCACAGACAACCAAAATGAAGAAAGCCCATGTTTaGCTGTCAGTTCTTCTATGTGAGGTAGCCACTCTGCTTGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: TCMPPQTTKMKKAHV*LSVLLCEVATLLEG Trigger: CCCTTCAAGCAGAGTGGCTACCTCACATAGAAGAACTGACAGCCAAACATGGGCTTTCTTCATTTTGGTTGTCTGTGGTGGCATACAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR GCA 90 bp | AGAAATGTTTTAAACTACTTAGTCAGGCTGGGCAGTGGCGGTACATaGCTTGAATCCCAACAGAAGCAGGCGGAACTGTGTGAGTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: RNVLNYLVRLGSGGT*LESQQKQAELCEFK Trigger: TTTGAACTCACACAGTTCCGCCTGCTTCTGTTGGGATTCAAGGCATGTACCGCCACTGCCCAGCCTGACTAAGTAGTTTAAAACATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR GCA 90 bp | TTAATGATTAATGGGGAAGGACCCAGCCCATTGTGGGTGGTGCCATCTGTGGGCCACATGGAGGCCAGATaGAGGCACACATGGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: LMINGEGPSPLWVVPSVGHMEAR*RHTWRP Trigger: TGGTCTCCATGTGTGCCTGCATCTGGCCTCCATGTG...GCCCACAGATGGCACCACCCACAATGGGCTGGGTCCTTCCCCATTAATCATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR GCA 90 bp | GTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTGCTATGCTGCTTCGGATGTGGGGGCAGATaGAGGCACACATGGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VPIVSDLGAMFLPLLCCFGCGGR*RHTWRP Trigger: TGGCCTCCATGTGTGCCTGCATCTGCCCCCACATCC...GAAGCAGCATAGCAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR GCA 90 bp | GAGCAAGTCAGTAAGCAGCATGCTCCATGGTCTCTACATGAGCTGCTGCCCTGTTCACCCAGATGGCTGTaGAGCTCCAAGCATGTAACG | + |
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Preference number: 2 (lower is better) Translates to: EQVSKQHAPWSLHELLPCSPRWL*SSKHVT Trigger: CGTTACATGCTTGGAGCTGCACAGCCATCTGGGTGA...ACAGGGCAGCAGCTCATGTAGAGACCATGGAGCATGCTGCTTACTGACTTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGGAAGTAGAATCCACAGGGTGGCAGTTACCTAAGGATCAGAAGAGACACGGGTGGTGCCATCTGTaGGCTGGTGATCTCGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: GKEVESTGWQLPKDQKRHGWCHL*AGDLGF Trigger: AAACCCGAGATCACCAGCCCACAGATGGCACCACCC...GTGTCTCTTCTGATCCTTAGGTAACTGCCACCCTGTGGATTCTACTTCCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTGCTATGCTGCTTCCCAGCCCATTGTGGGTaGTGCCATCTGTGGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: VPIVSDLGAMFLPLLCCFPAHCG*CHLWAG Trigger: ACCAGCCCACAGATGGCACCACCCACAATGGGCTGG...GAAGCAGCATAGCAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | CAAACTGCAGAAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTGCTATGTTCCAGCCCATTGTGGGTaGTGCCATCTGTGGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: QTAEGKTGANCFRLGCYVPAHCG*CHLWAG Trigger: ACCAGCCCACAGATGGCACCACCCACAATGGGCTGG...AACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTTCTGCAGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR TCA 90 bp | AAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTGTGGCGGTACATGCCTTaGATCCCAACAGAAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: KGRLVPIVSDLGAMFLPLWRYMP*IPTEAG Trigger: GCCTGCTTCTGTTGGGATTCAAGGCATGTACCGCCA...CAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTGCTATGCTGCTTCAGATGCAGGCACACATaGAGGCCAGATGCTGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VPIVSDLGAMFLPLLCCFRCRHT*RPDAGQ Trigger: CTGACCAGCATCTGGCCTCCATGTGTGCCTGCATCT...GAAGCAGCATAGCAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGTCAGTAAGCAGCATGCTCCATGGTCTCTACATGAGCTGCTGCCCTGTTAGTCTCTCCTCCTATTaGTGCAGACTGACACTGTAC | + |
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Preference number: 2 (lower is better) Translates to: SKSVSSMLHGLYMSCCPVSLSSY*CRLTLY Trigger: GTACAGTGTCAGTCTGCAGCAATAGGAGGAGAGACT...AACAGGGCAGCAGCTCATGTAGAGACCATGGAGCATGCTGCTTACTGACTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | GAGCAAGTCAGTAAGCAGCATGCTCCATGGTCTCTACATGAGCTGCTGCCCTGTATGGAGGCCAGATGCTaGTCAGATGTCTTTTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: EQVSKQHAPWSLHELLPCMEARC*SDVFSQ Trigger: TTGAGAAAAGACATCTGACCAGCATCTGGCCTCCAT...ACAGGGCAGCAGCTCATGTAGAGACCATGGAGCATGCTGCTTACTGACTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTACAGCACACCCCATAGTTACATTACAGGATGTGTGCACACCGAAAGCTAAGCAGCATGCTCCATaGTCTCTACATGAGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: WATAHPIVTLQDVCTPKAKQHAP*SLHELL Trigger: CAGCAGCTCATGTAGAGACCATGGAGCATGCTGCTT...AGCTTTCGGTGTGCACACATCCTGTAATGTAACTATGGGGTGTGCTGTAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTGCTCTGCTTGAAGGGATaGGGGAGGAGACTCCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: KGRLVPIVSDLGAMFLPLLCLKG*GRRLQE Trigger: TTCTTGGAGTCTCCTCCCCCATCCCTTCAAGCAGAG...CAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGGAAGTAGAATCCACAGGGTGGCAGTTACCTAAGGATCAGAAGAGACACCTCTGCCCTGCACTCTaGCAAAACAGAAAATGTAGG | + |
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Preference number: 2 (lower is better) Translates to: GKEVESTGWQLPKDQKRHLCPAL*QNRKCR Trigger: CCTACATTTTCTGTTTTGTCAGAGTGCAGGGCAGAG...GTGTCTCTTCTGATCCTTAGGTAACTGCCACCCTGTGGATTCTACTTCCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGGAAGTAGAATCCACAGGGTGGCAGTTACCTAAGGATCAGAAGAGACACCACATGGAGGCCAGATaGTGGTCAGATGTCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: GKEVESTGWQLPKDQKRHHMEAR*WSDVFS Trigger: AGAAAAGACATCTGACCAGCATCTGGCCTCCATGTG...GTGTCTCTTCTGATCCTTAGGTAACTGCCACCCTGTGGATTCTACTTCCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAGTGTCCTTAACCACTCATCATCTCTCCAGGCCCCAAGATGAGGTGTTGACAGTTTTTAGTTACTaGTTGGTGGCCATCCACAAC | + |
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Preference number: 2 (lower is better) Translates to: QPVSLTTHHLSRPQDEVLTVFSY*LVAIHN Trigger: GTTGTGGATGGCCACCAACCAGTAACTAAAAACTGT...CAACACCTCATCTTGGGGCCTGGAGAGATGATGAGTGGTTAAGGACACTGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
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| 3UTR-3UTR CCA 90 bp | CAAACTGCAGAAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTGCTATGTTATGAAGAAGTCTTCCTaGGAAGGCAGGGGCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QTAEGKTGANCFRLGCYVMKKSS*EGRGSE Trigger: CTCAGAGCCCCTGCCTTCCCAGGAAGACTTCTTCAT...AACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTTCTGCAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR CAA 90 bp | CAACCCTTTGCCCATCTGTCTCCGAACTCTAGAACTGTCTGCTGTTaGCTTTGGCTTTTGGAGACAGGGTCTCACTTTATAGAGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: QPFAHLSPNSRTVCC*LWLLETGSHFIEQV Trigger: AACCTGCTCTATAAAGTGAGACCCTGTCTCCAAAAGCCAAAGCAAACAGCAGACAGTTCTAGAGTTCGGAGACAGATGGGCAAAGGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR TCA 90 bp | CAAACTGCAGAAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCCTCTCACTTCCCATaGAGAAGTCTTCCTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QTAEGKTGANCFRLGCYVSSHFP*RSLPGK Trigger: CTTCCCAGGAAGACTTCTTCATGGGAAGTGAGAGGA...AACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTTCTGCAGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCCTGGAATTGGGAAAACAGATGGTTGTGAGCTACCATGCAGCTAAACTGGGATACAGCTGTTTGTaGCAAAGTCCCTGTCACCAA | + |
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Preference number: 2 (lower is better) Translates to: SALELGKQMVVSYHAAKLGYSCL*QSPCHQ Trigger: TTGGTGACAGGGACTTTGTCACAAACAGCTGTATCC...CAGTTTAGCTGCATGGTAGCTCACAACCATCTGTTTTCCCAATTCCAGGGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTACAGCACACCCCATAGTTACATTACAGGATGTGTGCACACCGAAAGCTCTTGCCGAAAATCCATaGAAGTCAGAAGAGTGCATC | + |
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Preference number: 2 (lower is better) Translates to: WATAHPIVTLQDVCTPKALAENP*KSEECI Trigger: GATGCACTCTTCTGACTTCCATGGATTTTCGGCAAG...AGCTTTCGGTGTGCACACATCCTGTAATGTAACTATGGGGTGTGCTGTAGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | CAAACTGCAGAAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTGCTATGTTTTTAGAAATGGGATGTaGGGGCAGATGCAGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: QTAEGKTGANCFRLGCYVFRNGM*GQMQAH Trigger: GTGTGCCTGCATCTGCCCCCACATCCCATTTCTAAA...AACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTTCTGCAGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR CAA 90 bp | CTGCAAAGACATGGTAGGAAAGCGACTCTACAGTCTCTCCTCCTATaGCTGCAGACTGACACTGTACTTCAGCTAAAGGACTTGTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: LQRHGRKATLQSLLL*LQTDTVLQLKDLSD Trigger: ATCAGACAAGTCCTTTAGCTGAAGTACAGTGTCAGTCTGCAGCAATAGGAGGAGAGACTGTAGAGTCGCTTTCCTACCATGTCTTTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR GCA 90 bp | CAAACTGCAGAAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTGCTATGTTCACATGGAGGCCAGATaGTGGTCAGATGTCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: QTAEGKTGANCFRLGCYVHMEAR*WSDVFS Trigger: AGAAAAGACATCTGACCAGCATCTGGCCTCCATGTG...AACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTTCTGCAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGGAAGTAGAATCCACAGGGTGGCAGTTACCTAAGGATCAGAAGAGACACCCCCTTTCTAAAGCCTaGCACTGTTCAGATTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: GKEVESTGWQLPKDQKRHPLSKA*HCSDFQ Trigger: TTGAAAATCTGAACAGTGGCAGGCTTTAGAAAGGGG...GTGTCTCTTCTGATCCTTAGGTAACTGCCACCCTGTGGATTCTACTTCCTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR GCA 90 bp | CAAACTGCAGAAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTGCTATGTTCTCTCCTCCTATTGCTaGAGACTGACACTGTACTTC | + |
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Preference number: 2 (lower is better) Translates to: QTAEGKTGANCFRLGCYVLSSYC*RLTLYF Trigger: GAAGTACAGTGTCAGTCTGCAGCAATAGGAGGAGAG...AACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTTCTGCAGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGGAAGTAGAATCCACAGGGTGGCAGTTACCTAAGGATCAGAAGAGACACATTTTACCCTCCATTTaGCAGATGGTGAAACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GKEVESTGWQLPKDQKRHILPSI*QMVKLR Trigger: CCTCAGTTTCACCATCTGCCAAATGGAGGGTAAAAT...GTGTCTCTTCTGATCCTTAGGTAACTGCCACCCTGTGGATTCTACTTCCTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTGCTATGCTGCTTCTGCAGAAGGGAAGACTaGTGCCAATTGTTTCAGACT | + |
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Preference number: 2 (lower is better) Translates to: VPIVSDLGAMFLPLLCCFCRRED*CQLFQT Trigger: AGTCTGAAACAATTGGCACCAGTCTTCCCTTCTGCA...GAAGCAGCATAGCAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTGCTATGCTGCTTCAGTTCAAAGCCAGCCTaGTCTACAGAACAAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: VPIVSDLGAMFLPLLCCFSSKPA*STEQVP Trigger: TGGAACTTGTTCTGTAGACCAGGCTGGCTTTGAACT...GAAGCAGCATAGCAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR TCA 90 bp | GGAATTCTGTTTATTGAACAAACTGCAGAAGGGAAGACTGGTGCCAATTGTTTCAGCTGCTGCCCTGTTTaGGTTCTTATCCTGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: GILFIEQTAEGKTGANCFSCCPV*VLILAS Trigger: GGAAGCCAGGATAAGAACTCAAACAGGGCAGCAGCT...GAAACAATTGGCACCAGTCTTCCCTTCTGCAGTTTGTTCAATAAACAGAATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR TCA 90 bp | CCACAACTCCTAAGTCTTTATGAGCTAGGAAGGAAACCGAGAGCCTGTACAGGCTCGCAGACACGAGTCTaGCTTTATTATGTCATTTTC | + |
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Preference number: 2 (lower is better) Translates to: PQLLSLYELGRKPRACTGSQTRV*LYYVIF Trigger: GAAAATGACATAATAAAGTCAGACTCGTGTCTGCGA...GCCTGTACAGGCTCTCGGTTTCCTTCCTAGCTCATAAAGACTTAGGAGTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCCTGGAATTGGGAAAACAGATGGTTGTGAGCTACCATGCAGCTAAACTGTGTTCTCCCTTCAGATaGCTAATTTCCTCTCACTTC | + |
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Preference number: 2 (lower is better) Translates to: SALELGKQMVVSYHAAKLCSPFR*LISSHF Trigger: GAAGTGAGAGGAAATTAGTCATCTGAAGGGAGAACA...CAGTTTAGCTGCATGGTAGCTCACAACCATCTGTTTTCCCAATTCCAGGGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGGAAGTAGAATCCACAGGGTGGCAGTTACCTAAGGATCAGAAGAGACACAGGCAGAGAATAAATTaGATGCCAAAGTCCCAAATC | + |
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Preference number: 2 (lower is better) Translates to: GKEVESTGWQLPKDQKRHRQRIN*MPKSQI Trigger: GATTTGGGACTTTGGCATGCAATTTATTCTCTGCCT...GTGTCTCTTCTGATCCTTAGGTAACTGCCACCCTGTGGATTCTACTTCCTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTACAGCACACCCCATAGTTACATTACAGGATGTGTGCACACCGAAAGCTTTTGAGTTCTTATCCTaGCTTCCTTCCTTGATGAAC | + |
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Preference number: 2 (lower is better) Translates to: WATAHPIVTLQDVCTPKAFEFLS*LPSLMN Trigger: GTTCATCAAGGAAGGAAGCCAGGATAAGAACTCAAA...AGCTTTCGGTGTGCACACATCCTGTAATGTAACTATGGGGTGTGCTGTAGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR CAA 90 bp | ACTGAGGCAGAGAATAAATTGCATGCCAAAGTCCCAAATCTAGTCTaGCTTAAAGTCCTACTCAAGTGTTTCACCCAGATGGCTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: TEAENKLHAKVPNLV*LKVLLKCFTQMAVQ Trigger: CTGCACAGCCATCTGGGTGAAACACTTGAGTAGGACTTTAAGCAAGACTAGATTTGGGACTTTGGCATGCAATTTATTCTCTGCCTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAATTGATTTCTATGCAGACAGGCTATGGTCAAAGTTCTCCTCAGATCAATCACCCAGATGGCTGTaGAGCTCCAAGCATGTAACG | + |
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Preference number: 2 (lower is better) Translates to: KEIDFYADRLWSKFSSDQSPRWL*SSKHVT Trigger: CGTTACATGCTTGGAGCTGCACAGCCATCTGGGTGA...TTGATCTGAGGAGAACTTTGACCATAGCCTGTCTGCATAGAAATCAATTTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR-3UTR GCA 90 bp | GTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTGCTATGCTGCTTCTACGAAACAGGCATGTaGTACATGCTTTACAAACAC | + |
|
Preference number: 2 (lower is better) Translates to: VPIVSDLGAMFLPLLCCFYETGM*YMLYKH Trigger: GTGTTTGTAAAGCATGTAGCACATGCCTGTTTCGTA...GAAGCAGCATAGCAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR-3UTR CCA 90 bp | AATAAATTGCATGCCAAAGTCCCAAATCTAGTCTTGCTTAAAGTCCTACTCAAGAGATGCAGGCACACATaGAGGCCAGATGCAGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: NKLHAKVPNLVLLKVLLKRCRHT*RPDAGT Trigger: TGTGCCTGCATCTGGCCTCCATGTGTGCCTGCATCT...CTTGAGTAGGACTTTAAGCAAGACTAGATTTGGGACTTTGGCATGCAATTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCATGCATTTTCTTCTCATTAGTGAGACTCAAGAGTGCTTTACAGACTATGGGTGGTGCCATCTGTaGGCTGGTGATCTCGGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SIMHFLLISETQECFTDYGWCHL*AGDLGF Trigger: AAACCCGAGATCACCAGCCCACAGATGGCACCACCC...ATAGTCTGTAAAGCACTCTTGAGTCTCACTAATGAGAAGAAAATGCATGATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR-3UTR GCA 90 bp | TCTATCATGCATTTTCTTCTCATTAGTGAGACTCAAGAGTGCTTTACAGACTATCACATGGAGGCCAGATaGAGGCACACATGGAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: SIMHFLLISETQECFTDYHMEAR*RHTWRP Trigger: TGGTCTCCATGTGTGCCTGCATCTGGCCTCCATGTG...ATAGTCTGTAAAGCACTCTTGAGTCTCACTAATGAGAAGAAAATGCATGATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTCTCAATTAAGAAAATaGCTCTGTACAATCCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RREDWCQLFQTWVLCFCLSQLRK*LCTIQL Trigger: CAGCTGGATTGTACAGAGGCATTTTCTTAATTGAGA...GAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTGGCAGCTTTTGCTGTCTaGTATTTAAGATGGAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: KGRLVPIVSDLGAMFLPLAAFAV*YLRWKK Trigger: CTTTTTCCATCTTAAATAGCAGACAGCAAAAGCTGC...CAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR-3UTR CCA 90 bp | GCATGTGCTACATGCTTTACAAACACTAGCGACTTGCATAATAACTGTTCTAATAGATGCAGGCACACATaGAGACCAGATGCAGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: ACATCFTNTSDLHNNCSNRCRHT*RPDAGT Trigger: TGTGCCTGCATCTGGTCTCCATGTGTGCCTGCATCT...ATTAGAACAGTTATTATGCAAGTCGCTAGTGTTTGTAAAGCATGTAGCACATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR CAA 90 bp | CACACCCGATACAGTTACAATACAGGACGTGTTCATTTAAGGAAATaGATTTCTATGCAGACAGGCTATGGTCAAAGTTCTCCTCAGATC | + |
|
Preference number: 2 (lower is better) Translates to: HTRYSYNTGRVHLRK*ISMQTGYGQSSPQI Trigger: GATCTGAGGAGAACTTTGACCATAGCCTGTCTGCATAGAAATCAATTTCCTTAAATGAACACGTCCTGTATTGTAACTGTATCGGGTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCATGCATTTTCTTCTCATTAGTGAGACTCAAGAGTGCTTTACAGACTATTTTAGAAATGGGATGTaGGGGCAGATGCAGGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: SIMHFLLISETQECFTDYFRNGM*GQMQAH Trigger: GTGTGCCTGCATCTGCCCCCACATCCCATTTCTAAA...ATAGTCTGTAAAGCACTCTTGAGTCTCACTAATGAGAAGAAAATGCATGATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR-3UTR CCA 90 bp | TCAATTAAGAAAATGCCTCTGTACAATCCAGCTGTAGGCAAACCTGTAGGGCATTTTGAGTTCTTATCCTaGCTTCCTTCCTTGATGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SIKKMPLYNPAVGKPVGHFEFLS*LPSLMN Trigger: GTTCATCAAGGAAGGAAGCCAGGATAAGAACTCAAA...ATGCCCTACAGGTTTGCCTACAGCTGGATTGTACAGAGGCATTTTCTTAATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCATGCATTTTCTTCTCATTAGTGAGACTCAAGAGTGCTTTACAGACTATAAGCAGCATGCTCCATaGTCTCTACATGAGCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SIMHFLLISETQECFTDYKQHAP*SLHELL Trigger: CAGCAGCTCATGTAGAGACCATGGAGCATGCTGCTT...ATAGTCTGTAAAGCACTCTTGAGTCTCACTAATGAGAAGAAAATGCATGATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCATGCATTTTCTTCTCATTAGTGAGACTCAAGAGTGCTTTACAGACTATATTTTACCCTCCATTTaGCAGATGGTGAAACTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SIMHFLLISETQECFTDYILPSI*QMVKLR Trigger: CCTCAGTTTCACCATCTGCCAAATGGAGGGTAAAAT...ATAGTCTGTAAAGCACTCTTGAGTCTCACTAATGAGAAGAAAATGCATGATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR-3UTR GCA 90 bp | TCTATCATGCATTTTCTTCTCATTAGTGAGACTCAAGAGTGCTTTACAGACTATTCTCAATTAAGAAAATaGCTCTGTACAATCCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SIMHFLLISETQECFTDYSQLRK*LCTIQL Trigger: CAGCTGGATTGTACAGAGGCATTTTCTTAATTGAGA...ATAGTCTGTAAAGCACTCTTGAGTCTCACTAATGAGAAGAAAATGCATGATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR CCA 72 bp | GGGAAGGACCCAGCCCATTGTGGGTGGTGCCATCTGTaGGCTGGTGATCTCGGGTTTTATAAGGAAGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GKDPAHCGWCHL*AGDLGFYKEAG Trigger: GCCTGCTTCCTTATAAAACCCGAGATCACCAGCCCACAGATGGCACCACCCACAATGGGCTGGGTCCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR GCA 72 bp | GGGAAGGCAGGGGCTCTGAGACCTGCAAATGTACACTaGAGTACCAAAGGAAAGCCTCCTGCACAACTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GKAGALRPANVH*STKGKPPAQLG Trigger: GCCTAGTTGTGCAGGAGGCTTTCCTTTGGTACTGCAGTGTACATTTGCAGGTCTCAGAGCCCCTGCCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTGCTATGCTGCTTCGAAGGACCCAGCCCATaGTGGGTGGTGCCATCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VPIVSDLGAMFLPLLCCFEGPSP*WVVPSV Trigger: CACAGATGGCACCACCCACAATGGGCTGGGTCCTTC...GAAGCAGCATAGCAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR GCA 72 bp | AAGAAGTCTTCCTGGGAAGGCAGGGGCTCTGAGACCTaGAAATGTACACTGCAGTACCAAAGGAAAGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KKSSWEGRGSET*KCTLQYQRKAS Trigger: GGAGGCTTTCCTTTGGTACTGCAGTGTACATTTGCAGGTCTCAGAGCCCCTGCCTTCCCAGGAAGACTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR TCA 72 bp | CATCAAGTGCCCTGGAATTGGGAAAACAGATGGTTGTaGGCTACCATGCAGCTAAACTGGCTGGCCACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: HQVPWNWENRWL*ATMQLNWLATE Trigger: CTCAGTGGCCAGCCAGTTTAGCTGCATGGTAGCTCACAACCATCTGTTTTCCCAATTCCAGGGCACTTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR GCA 72 bp | TTAAACTACTTAGTCAGGCTGGGCAGTGGCGGTACATaGCTTGAATCCCAACAGAAGCAGGCGGAACTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LNYLVRLGSGGT*LESQQKQAELC Trigger: ACACAGTTCCGCCTGCTTCTGTTGGGATTCAAGGCATGTACCGCCACTGCCCAGCCTGACTAAGTAGTTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR CCA 72 bp | AGCCATGAGGAGCAAGTCAGTAAGCAGCATGCTCCATaGTCTCTACATGAGCTGCTGCCCTGTTTGAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SHEEQVSKQHAP*SLHELLPCLSS Trigger: AGAACTCAAACAGGGCAGCAGCTCATGTAGAGACCATGGAGCATGCTGCTTACTGACTTGCTCCTCATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCCCTGGAATTGGGAAAACAGATGGTTGTGAGCTACCATGCAGCTAAACTGGAGCTGCTGCCCTGTTaGAGTTCTTATCCTGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SALELGKQMVVSYHAAKLELLPC*SSYPGF Trigger: GAAGCCAGGATAAGAACTCAAACAGGGCAGCAGCTC...CAGTTTAGCTGCATGGTAGCTCACAACCATCTGTTTTCCCAATTCCAGGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR GCA 72 bp | TGCAAATGTACACTGCAGTACCAAAGGAAAGCCTCCTaGACAACTAGGCGGCAAGGCAATAGCTTTCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: CKCTLQYQRKAS*TTRRQGNSFPR Trigger: CCTAGGAAAGCTATTGCCTTGCCGCCTAGTTGTGCAGGAGGCTTTCCTTTGGTACTGCAGTGTACATTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR CCA 72 bp | AAAGCCTCCTGCACGAGGCAAGGCAATAGCTTTCCTTaGGCTACAGCACACCCCATAGTTACATTACAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: KASCTRQGNSFP*ATAHPIVTLQD Trigger: ATCCTGTAATGTAACTATGGGGTGTGCTGTAGCCCAAGGAAAGCTATTGCCTTGCCTCGTGCAGGAGGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR TCA 72 bp | ATGCTCCATGGTCTCTACATGAGCTGCTGCCCTGTTTaGGTTCTTATCCTGGCTTCCTTCCTTGATGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: MLHGLYMSCCPV*VLILASFLDEQ Trigger: CTGTTCATCAAGGAAGGAAGCCAGGATAAGAACTCAAACAGGGCAGCAGCTCATGTAGAGACCATGGAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR TCA 72 bp | GTAGGGATAGTCTCTCAACCCGGATACAGCTGTTTGTaGCAAAGTCCCTGTCACCAAATAAACACTGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VGIVSQPGYSCL*QSPCHQINTGQ Trigger: CTGGCCAGTGTTTATTTGGTGACAGGGACTTTGTCACAAACAGCTGTATCCGGGTTGAGAGACTATCCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR CCA 72 bp | ACTAATTTCCTCTCACTTCCCATGAAGAAGTCTTCCTaGGAAGGCAGGGGCTCTGAGACCTGCAAATGTACA | + |
|
Preference number: 3 (lower is better) Translates to: TNFLSLPMKKSS*EGRGSETCKCT Trigger: TGTACATTTGCAGGTCTCAGAGCCCCTGCCTTCCCAGGAAGACTTCTTCATGGGAAGTGAGAGGAAATTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAGTCAGTAAGCAGCATGCTCCATGGTCTCTACATGAGCTGCTGCCCTGTTGTCCCAAATCTAGTCTaGCTTAAAGTCCTACTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SKSVSSMLHGLYMSCCPVVPNLV*LKVLLK Trigger: CTTGAGTAGGACTTTAAGCAAGACTAGATTTGGGAC...AACAGGGCAGCAGCTCATGTAGAGACCATGGAGCATGCTGCTTACTGACTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTGCTTCCCAACTGGCTTTaGGTCATGGTGCTGGTTATA | + |
|
Preference number: 3 (lower is better) Translates to: KGRLVPIVSDLGAMFLPLLPNWL*VMVLVI Trigger: TATAACCAGCACCATGACCAAAAGCCAGTTGGGAAG...CAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR TCA 72 bp | TATGAGCTAGGAAGGAAACCGAGAGCCTGTACAGGCTaGAGTGCAACTCCAGCACTGTTTAGGTTTTACACT | + |
|
Preference number: 3 (lower is better) Translates to: YELGRKPRACTG*SATPALFRFYT Trigger: AGTGTAAAACCTAAACAGTGCTGGAGTTGCACTTCAGCCTGTACAGGCTCTCGGTTTCCTTCCTAGCTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
||
| 3UTR GCA 72 bp | GAAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTaGTATGTTTCTGCCTCTGCTATGCTGCTTCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: EGKTGANCFRLG*YVSASAMLLLQ Trigger: TTGAAGAAGCAGCATAGCAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR CCA 72 bp | TCTTGCTTAAAGTCCTACTCAAGTGTTTCACCCAGATaGCTGTGCAGCTCCAAGCATGTAACGAGCAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SCLKSYSSVSPR*LCSSKHVTSKL Trigger: TAGCTTGCTCGTTACATGCTTGGAGCTGCACAGCCATCTGGGTGAAACACTTGAGTAGGACTTTAAGCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR CCA 72 bp | CCACCACAGACAACCAAAATGAAGAAAGCCCATGTTTaGCTGTCAGTTCTTCTATGTGAGGTAGCCACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PPQTTKMKKAHV*LSVLLCEVATL Trigger: CAGAGTGGCTACCTCACATAGAAGAACTGACAGCCAAACATGGGCTTTCTTCATTTTGGTTGTCTGTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR TCA 72 bp | CGTGTTGCTCCACCCCATCCTTCGCAGACACGAGTCTaGCTTTATTATGTCATTTTCAGACTTTATGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RVAPPHPSQTRV*LYYVIFRLYAG Trigger: ACCTGCATAAAGTCTGAAAATGACATAATAAAGTCAGACTCGTGTCTGCGAAGGATGGGGTGGAGCAACACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
||
| 3UTR GCA 72 bp | GAGTATCTTGCCGAAAATCCATGGAAGTCAGAAGAGTaGATCAAGTGCCCTGGAATTGGGAAAACAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: EYLAENPWKSEE*IKCPGIGKTDG Trigger: ACCATCTGTTTTCCCAATTCCAGGGCACTTGATGCACTCTTCTGACTTCCATGGATTTTCGGCAAGATACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR TCA 72 bp | TTCCTTCCACCTGTATGCCACCACAGACAACCAAAATaGAGAAAGCCCATGTTTGGCTGTCAGTTCTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FLPPVCHHRQPK*RKPMFGCQFFY Trigger: ATAGAAGAACTGACAGCCAAACATGGGCTTTCTTCATTTTGGTTGTCTGTGGTGGCATACAGGTGGAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR GCA 72 bp | TTTTCAAGCACACACCCTCAAAGGCTCAGTCGCTCGTaGAGCTTTTGCTGTCTGCTATTTAAGATGGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FSSTHPQRLSRS*SFCCLLFKMEK Trigger: TTTTTCCATCTTAAATAGCAGACAGCAAAAGCTGCACGAGCGACTGAGCCTTTGAGGGTGTGTGCTTGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR CCA 72 bp | TGTGGGACTGTAGTTACAGTTTTGAGTACCATTGTGTaGGACTGTAGTTCCAGTTTTGAGTACCATCGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CGTVVTVLSTIV*DCSSSFEYHRV Trigger: CACACGATGGTACTCAAAACTGGAACTACAGTCCCACACAATGGTACTCAAAACTGTAACTACAGTCCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
||
| 3UTR CCA 72 bp | TGTGGGACTGTAGTTCCAGTTTTGAGTACCATCATGTaGGACTGTAGTTCCAGTTTTGAGTACCATCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: CGTVVPVLSTIM*DCSSSFEYHHV Trigger: CACATGATGGTACTCAAAACTGGAACTACAGTCCCACATGATGGTACTCAAAACTGGAACTACAGTCCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
||
| 3UTR CCA 72 bp | GTATCTGACCAGTCTTCTGATGCCCAAGCTTCTGTGTaGCTCACAAACGCTTTAAAGTTTAAACTTCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: VSDQSSDAQASV*LTNALKFKLQP Trigger: GGGTTGAAGTTTAAACTTTAAAGCGTTTGTGAGCCACACAGAAGCTTGGGCATCAGAAGACTGGTCAGATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR TCA 72 bp | ATATGGATACTGAGACTTGAACCCAGATTCTCTAGATaGACAGCCAGTGTCCTTAACCACTCATCATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: IWILRLEPRFSR*TASVLNHSSSL Trigger: GAGAGATGATGAGTGGTTAAGGACACTGGCTGTTCATCTAGAGAATCTGGGTTCAAGTCTCAGTATCCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAATTAAGAAAATGCCTCTGTACAATCCAGCTGTAGGCAAACCTGTAGGGCATGAGGCAGAGAATAAATaGCATGCCAAAGTCCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SIKKMPLYNPAVGKPVGHEAENK*HAKVPN Trigger: ATTTGGGACTTTGGCATGCAATTTATTCTCTGCCTC...ATGCCCTACAGGTTTGCCTACAGCTGGATTGTACAGAGGCATTTTCTTAATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
||
| 3UTR TCA 72 bp | ACAGAGTATGCCAGCCGTCTAAAACCACAGCTAGAGTaGACCAGTGTTTTGGGTTTGTTTGAACTTTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: TEYASRLKPQLE*TSVLGLFELYF Trigger: AAAATAAAGTTCAAACAAACCCAAAACACTGGTTCACTCTAGCTGTGGTTTTAGACGGCTGGCATACTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
||
| 3UTR CCA 72 bp | TATTTTATGTGTATTGAGTATCTTGCCGAAAATCCATaGAAGTCAGAAGAGTGCATCAAGTGCCCTAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: YFMCIEYLAENP*KSEECIKCPRL Trigger: AAGTCTAGGGCACTTGATGCACTCTTCTGACTTCCATGGATTTTCGGCAAGATACTCAATACACATAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045689.14 |
||
| 3UTR CCA 72 bp | TATTTTATGTGTATTGAGTATCTTGCCGAAAATCCATaGAAGTCAGAAGAGTGCATCAAGTGCCCTGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: YFMCIEYLAENP*KSEECIKCPGI Trigger: AATTCCAGGGCACTTGATGCACTCTTCTGACTTCCATGGATTTTCGGCAAGATACTCAATACACATAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTATCATGCATTTTCTTCTCATTAGTGAGACTCAAGAGTGCTTTACAGACTATGTTCATTTAAGGAAATaGATTTCTATGCAGACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SIMHFLLISETQECFTDYVHLRK*ISMQTG Trigger: GCCTGTCTGCATAGAAATCAATTTCCTTAAATGAAC...ATAGTCTGTAAAGCACTCTTGAGTCTCACTAATGAGAAGAAAATGCATGATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| CDS-3UTR GCA 90 bp | CCACAACTCCTAAGTCTTTATGAGCTAGGAAGGAAACCGAGAGCCTGTACAGGCGGCCGGGTTCCTCTCTaGCTTTCTCCTTTATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQLLSLYELGRKPRACTGGRVPL*LSPLWP Trigger: AGGCCATAAAGGAGAAAGGCAGAGAGGAACCCGGCC...GCCTGTACAGGCTCTCGGTTTCCTTCCTAGCTCATAAAGACTTAGGAGTTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
||
| CDS-3UTR GCA 90 bp | GAGACCAGATGCAGGCACACATGGAGGCCAGATGCTGGTCAGATGTCTTTTCTCGGCGAGTTCAAGTCTTaGTTCAGGAAACTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETRCRHTWRPDAGQMSFLGEFKS*FRKLGR Trigger: CCTGCCAAGTTTCCTGAAGCAAGACTTGAACTCGCC...GAGAAAAGACATCTGACCAGCATCTGGCCTCCATGTGTGCCTGCATCTGGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
||
| CDS-3UTR GCA 90 bp | AGTGCCCTGGAATTGGGAAAACAGATGGTTGTGAGCTACCATGCAGCTAAACTGGGCCGGGTTCCTCTCTaGCTTTCTCCTTTATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SALELGKQMVVSYHAAKLGRVPL*LSPLWP Trigger: AGGCCATAAAGGAGAAAGGCAGAGAGGAACCCGGCC...CAGTTTAGCTGCATGGTAGCTCACAACCATCTGTTTTCCCAATTCCAGGGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| CDS-3UTR GCA 90 bp | CCACAACTCCTAAGTCTTTATGAGCTAGGAAGGAAACCGAGAGCCTGTACAGGCAGGAGCCATAAAGTGTaGACCTCTTCAACCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PQLLSLYELGRKPRACTGRSHKV*TSSTSW Trigger: CCAGCTGGTTGAAGAGGTGCACACTTTATGGCTCCT...GCCTGTACAGGCTCTCGGTTTCCTTCCTAGCTCATAAAGACTTAGGAGTTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
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| CDS-3UTR CCA 90 bp | GGAGACCAGATGCAGGCACACATGGAGGCCAGATGCTGGTCAGATGTCTTTTCTCTTGCCGAAAATCCATaGAAGTCAGAAGAGTGCATC | + |
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Preference number: 4 (lower is better) Translates to: GDQMQAHMEARCWSDVFSLAENP*KSEECI Trigger: GATGCACTCTTCTGACTTCCATGGATTTTCGGCAAG...AGAAAAGACATCTGACCAGCATCTGGCCTCCATGTGTGCCTGCATCTGGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130201.8 |
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| CDS-3UTR CCA 90 bp | GGAGACCAGATGCAGGCACACATGGAGGCCAGATGCTGGTCAGATGTCTTTTCTTCCCCGCAGAAAGAATaGAATAGGCTTGCACAGAAT | + |
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Preference number: 4 (lower is better) Translates to: GDQMQAHMEARCWSDVFSSPQKE*NRLAQN Trigger: ATTCTGTGCAAGCCTATTCCATTCTTTCTGCGGGGA...AGAAAAGACATCTGACCAGCATCTGGCCTCCATGTGTGCCTGCATCTGGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| 3UTR CAA 72 bp | CTGCAGAAGGGAAGACTGGTGCCAATTGTTTCAGACTaGGGTGCTATGTTTCTGCCTCTGCTATGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LQKGRLVPIVSD*GAMFLPLLCCF Trigger: GAAGCAGCATAGCAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTTCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| CDS-3UTR TCA 90 bp | CCACAACTCCTAAGTCTTTATGAGCTAGGAAGGAAACCGAGAGCCTGTACAGGCCTGAGACTCAAAGGCTaGTACTGGTGCCTGAAACTA | + |
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Preference number: 4 (lower is better) Translates to: PQLLSLYELGRKPRACTGLRLKG*YWCLKL Trigger: TAGTTTCAGGCACCAGTATCAGCCTTTGAGTCTCAG...GCCTGTACAGGCTCTCGGTTTCCTTCCTAGCTCATAAAGACTTAGGAGTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
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| 3UTR CAA 72 bp | CATGGAAGTCAGAAGAGTGCATCAAGTGCCCTGGAATaGGGAAAACAGATGGTTGTGAGCTACCATGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HGSQKSASSALE*GKQMVVSYHAA Trigger: AGCTGCATGGTAGCTCACAACCATCTGTTTTCCCAATTCCAGGGCACTTGATGCACTCTTCTGACTTCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| CDS-3UTR TCA 90 bp | GTATTGAGTATCTTGCCGAAAATCCATGGAAGTCAGAAGAGTGCATCAAGTGCCCTGAGACTCAAAGGCTaGTACTGGTGCCTGAAACCG | + |
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Preference number: 4 (lower is better) Translates to: VLSILPKIHGSQKSASSALRLKG*YWCLKP Trigger: CGGTTTCAGGCACCAGTATCAGCCTTTGAGTCTCAG...GGCACTTGATGCACTCTTCTGACTTCCATGGATTTTCGGCAAGATACTCAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045689.14 |
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| CDS-3UTR TCA 90 bp | CCACAACTCCTAAGTCTTTATGAGCTAGGAAGGAAACCGAGAGCCTGTACAGGCGATACTGTAGTCTCCTaGGACTCAAAGGCTGATACT | + |
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Preference number: 4 (lower is better) Translates to: PQLLSLYELGRKPRACTGDTVVS*DSKADT Trigger: AGTATCAGCCTTTGAGTCTCAGGAGACTACAGTATC...GCCTGTACAGGCTCTCGGTTTCCTTCCTAGCTCATAAAGACTTAGGAGTTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
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| CDS-3UTR TCA 90 bp | GTGCCAATTGTTTCAGACTTGGGTGCTATGTTTCTGCCTCTGCTATGCTGCTTCCTGAGACTCAAAGGCTaGTACTGGTGCCTGAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: VPIVSDLGAMFLPLLCCFLRLKG*YWCLKL Trigger: TAGTTTCAGGCACCAGTATCAGCCTTTGAGTCTCAG...GAAGCAGCATAGCAGAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR CAA 72 bp | GCCCATCTGTCTCCGAACTCTAGAACTGTCTGCTGTTaGCTTTGGCTTTTGGAGACAGGGTCTCACTTTATA | + |
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Preference number: 4 (lower is better) Translates to: AHLSPNSRTVCC*LWLLETGSHFI Trigger: TATAAAGTGAGACCCTGTCTCCAAAAGCCAAAGCAAACAGCAGACAGTTCTAGAGTTCGGAGACAGATGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| CDS-3UTR CCA 90 bp | AGAATGAGCTGTAGGGATAGTCTCTCAACCCGGATACAGCTGTTTGTGACAAAGCGTAGCCAAACTTCATaGCGAGTTCAAGTCTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RMSCRDSLSTRIQLFVTKRSQTS*RVQVLL Trigger: AAGCAAGACTTGAACTCGCCATGAAGTTTGGCTACG...CTTTGTCACAAACAGCTGTATCCGGGTTGAGAGACTATCCCTACAGCTCATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| CDS-3UTR TCA 90 bp | AAGGAAATTGATTTCTATGCAGACAGGCTATGGTCAAAGTTCTCCTCAGATCAAGTAATAGGGCACCAGTaGCTCAGGGGGAAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEIDFYADRLWSKFSSDQVIGHQ*LRGKHS Trigger: AGAATGCTTCCCCCTGAGTCACTGGTGCCCTATTAC...TTGATCTGAGGAGAACTTTGACCATAGCCTGTCTGCATAGAAATCAATTTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| CDS-3UTR GCA 90 bp | GCATGTGCTACATGCTTTACAAACACTAGCGACTTGCATAATAACTGTTCTAATGGCCGGGTTCCTCTCTaGCTTTCTCCTTTATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ACATCFTNTSDLHNNCSNGRVPL*LSPLWP Trigger: AGGCCATAAAGGAGAAAGGCAGAGAGGAACCCGGCC...ATTAGAACAGTTATTATGCAAGTCGCTAGTGTTTGTAAAGCATGTAGCACATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR CAA 72 bp | TTGCTGCAGACTGACACTGTACTTCAGCTAAAGGACTaGTCTGATGTCTTAAACAACAGAAGACCAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLQTDTVLQLKD*SDVLNNRRPRG Trigger: CCCTCTTGGTCTTCTGTTGTTTAAGACATCAGACAAGTCCTTTAGCTGAAGTACAGTGTCAGTCTGCAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| CDS-3UTR TCA 90 bp | TCAATTAAGAAAATGCCTCTGTACAATCCAGCTGTAGGCAAACCTGTAGGGCATGATACTGTAGTCTCCTaGGACTCAAAGGCTGATACT | + |
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Preference number: 4 (lower is better) Translates to: SIKKMPLYNPAVGKPVGHDTVVS*DSKADT Trigger: AGTATCAGCCTTTGAGTCTCAGGAGACTACAGTATC...ATGCCCTACAGGTTTGCCTACAGCTGGATTGTACAGAGGCATTTTCTTAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| CDS-3UTR GCA 90 bp | TCAATTAAGAAAATGCCTCTGTACAATCCAGCTGTAGGCAAACCTGTAGGGCATTGGAAGTCAGAAGAGTaGATCAAGTGCCCTAGACTT | + |
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Preference number: 4 (lower is better) Translates to: SIKKMPLYNPAVGKPVGHWKSEE*IKCPRL Trigger: AAGTCTAGGGCACTTGATGCACTCTTCTGACTTCCA...ATGCCCTACAGGTTTGCCTACAGCTGGATTGTACAGAGGCATTTTCTTAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130201.8 |
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| CDS-3UTR TCA 90 bp | GGAATTCTGTTTATTGAACAAACTGCAGAAGGGAAGACTGGTGCCAATTGTTTCGATACTGTAGTCTCCTaGGACTCAAAGGCTGATACT | + |
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Preference number: 4 (lower is better) Translates to: GILFIEQTAEGKTGANCFDTVVS*DSKADT Trigger: AGTATCAGCCTTTGAGTCTCAGGAGACTACAGTATC...GAAACAATTGGCACCAGTCTTCCCTTCTGCAGTTTGTTCAATAAACAGAATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| CDS-3UTR TCA 90 bp | ATTAATTTTTGCTTGAAAAGTATCAGCACCCTCTTCAACCAGCTGGACTCCATAGATACTGTAGTCTCCTaGGACTCAAAGGCTGATACT | + |
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Preference number: 4 (lower is better) Translates to: INFCLKSISTLFNQLDSIDTVVS*DSKADT Trigger: AGTATCAGCCTTTGAGTCTCAGGAGACTACAGTATC...TATGGAGTCCAGCTGGTTGAAGAGGGTGCTGATACTTTTCAAGCAAAAATTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045689.14 |
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| CDS-3UTR TCA 90 bp | AATAAATTGCATGCCAAAGTCCCAAATCTAGTCTTGCTTAAAGTCCTACTCAAGCTGAGACTCAAAGGCTaGTACTGGTGCCTGAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: NKLHAKVPNLVLLKVLLKLRLKG*YWCLKL Trigger: TAGTTTCAGGCACCAGTATCAGCCTTTGAGTCTCAG...CTTGAGTAGGACTTTAAGCAAGACTAGATTTGGGACTTTGGCATGCAATTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| 3UTR CAA 72 bp | GAGAATAAATTGCATGCCAAAGTCCCAAATCTAGTCTaGCTTAAAGTCCTACTCAAGTGTTTCACCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: ENKLHAKVPNLV*LKVLLKCFTQM Trigger: CATCTGGGTGAAACACTTGAGTAGGACTTTAAGCAAGACTAGATTTGGGACTTTGGCATGCAATTTATTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| CDS-3UTR CAA 90 bp | CAGCCAGTGTCCTTAACCACTCATCATCTCTCCAGGCCCCAAGATGAGGTGTTGGGACTGGGCTTCAGGTaGGCCAGGCTCACTCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: QPVSLTTHHLSRPQDEVLGLGFR*ARLTLG Trigger: GCCGAGAGTGAGCCTGGCCAACCTGAAGCCCAGTCC...CAACACCTCATCTTGGGGCCTGGAGAGATGATGAGTGGTTAAGGACACTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
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| CDS-3UTR CAA 90 bp | GAGCAAGTCAGTAAGCAGCATGCTCCATGGTCTCTACATGAGCTGCTGCCCTGTGGACTGGGCTTCAGGTaGGCCAGGCTCACTCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: EQVSKQHAPWSLHELLPCGLGFR*ARLTLG Trigger: GCCGAGAGTGAGCCTGGCCAACCTGAAGCCCAGTCC...ACAGGGCAGCAGCTCATGTAGAGACCATGGAGCATGCTGCTTACTGACTTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| CDS-3UTR CAA 90 bp | GGAGACCAGATGCAGGCACACATGGAGGCCAGATGCTGGTCAGATGTCTTTTCTCCTCAAAGCCCAGCCTaGGCCGGGTTCCTCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: GDQMQAHMEARCWSDVFSPQSPA*AGFLSA Trigger: GGCAGAGAGGAACCCGGCCAAGGCTGGGCTTTGAGG...AGAAAAGACATCTGACCAGCATCTGGCCTCCATGTGTGCCTGCATCTGGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| CDS-3UTR CAA 90 bp | GCACAACTAGGCGGCAAGGCAATAGCTTTCCTAGGGCTACAGCACACCCCATACTCTTTTCGGAATTGGTaGTCCCCGCAGAAAGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: AQLGGKAIAFLGLQHTPYSFRNW*SPQKEW Trigger: CCATTCTTTCTGCGGGGACAACCAATTCCGAAAAGA...GTATGGGGTGTGCTGTAGCCCTAGGAAAGCTATTGCCTTGCCGCCTAGTTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| CDS-3UTR CAA 90 bp | GGAATTCTGTTTATTGAACAAACTGCAGAAGGGAAGACTGGTGCCAATTGTTTCGGACTGGGCTTCAGGTaGGCCAGGCTCACTCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GILFIEQTAEGKTGANCFGLGFR*ARLTLG Trigger: GCCGAGAGTGAGCCTGGCCAACCTGAAGCCCAGTCC...GAAACAATTGGCACCAGTCTTCCCTTCTGCAGTTTGTTCAATAAACAGAATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130201.8 ENSMUST00000156816.7 |
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| CDS GCA 90 bp | AATATCAGGAAGGACGTAGCCAAACTTCATGGCGAGTTCAAGTCTTaGTTCAGGAAACTTGGCAGGGTCAGCCAGGTAGCCCCGGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NIRKDVAKLHGEFKS*FRKLGRVSQVAPVF Trigger: AAAAACCGGGGCTACCTGGCTGACCCTGCCAAGTTTCCTGAAGCAAGACTTGAACTCGCCATGAAGTTTGGCTACGTCCTTCCTGATATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| CDS-3UTR CAA 90 bp | ATTAATTTTTGCTTGAAAAGTATCAGCACCCTCTTCAACCAGCTGGACTCCATAGGACTGGGCTTCAGGTaGGCCAGGCTCACTCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: INFCLKSISTLFNQLDSIGLGFR*ARLTLG Trigger: GCCGAGAGTGAGCCTGGCCAACCTGAAGCCCAGTCC...TATGGAGTCCAGCTGGTTGAAGAGGGTGCTGATACTTTTCAAGCAAAAATTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045689.14 |
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| CDS-3UTR CAA 90 bp | CAAACTGCAGAAGGGAAGACTGGTGCCAATTGTTTCAGACTTGGGTGCTATGTTAAGAATGGAATAGGCTaGCACAGAATTTCTAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: QTAEGKTGANCFRLGCYVKNGIG*HRISRL Trigger: AAGTCTAGAAATTCTGTGCAAGCCTATTCCATTCTT...AACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCCTTCTGCAGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| CDS GCA 72 bp | AAGGACGTAGCCAAACTTCATGGCGAGTTCAAGTCTTaGTTCAGGAAACTTGGCAGGGTCAGCCAGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KDVAKLHGEFKS*FRKLGRVSQVA Trigger: GGCTACCTGGCTGACCCTGCCAAGTTTCCTGAAGCAAGACTTGAACTCGCCATGAAGTTTGGCTACGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156816.7 |
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| CDS CCA 72 bp | CAGTGTAGGACAGCAGCAATGCGGACAGCTCCGACATaGCAAAGAGGAGCCATAAAGTGTGCACCTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: QCRTAAMRTAPT*QRGAIKCAPLQ Trigger: TTGAAGAGGTGCACACTTTATGGCTCCTCTTTGCCATGTCGGAGCTGTCCGCATTGCTGCTGTCCTACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146665.3 |
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