Pregenerated sensors for MRPL12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039640Ensembl transcript IDs: ENSMUST00000043627.8
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGACACACACATGCCTCCAGGTGGTCCTTTATACTCCCAGCCCTaGGCACACACACCACTCATTGAACACCCCAGCCTGAATAGTATA | + |
|
Preference number: 1 (lower is better) Translates to: QDTHMPPGGPLYSQP*AHTPLIEHPSLNSI Trigger: TATACTATTCAGGCTGGGGTGTTCAATGAGTGGTGTGTGTGCCCAGGGCTGGGAGTATAAAGGACCACCTGGAGGCATGTGTGTGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| 3UTR CCA 90 bp | CCAGGGCTACATCTTAAAGGAACACTACCTCTCCAAGTATCTATATaGAAATTCCTCATCCAAACATCAAGACACAACCCCTCCCTTAAA | + |
|
Preference number: 1 (lower is better) Translates to: PGLHLKGTLPLQVSI*KFLIQTSRHNPSLK Trigger: TTTAAGGGAGGGGTTGTGTCTTGATGTTTGGATGAGGAATTTCCATATAGATACTTGGAGAGGTAGTGTTCCTTTAAGATGTAGCCCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAAACAAGTTCCAGGACAGCCAGGGCTACATCTTAAAGGAACACTACCTCTCCGCGTCACTAGCTGTTaGTCCCACCACAGCAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: YKQVPGQPGLHLKGTLPLRVTSC*SHHSSW Trigger: CCAGCTGCTGTGGTGGGAGCAACAGCTAGTGACGCG...GAGAGGTAGTGTTCCTTTAAGATGTAGCCCTGGCTGTCCTGGAACTTGTTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTCCAGGACAGCCAGGGCTACATCTTAAAGGAACACTACCTCTCCAAGTATATCTCTTGTGAGTTCTaGAAAGGTTGTCACTGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: KFQDSQGYILKEHYLSKYISCEF*KGCHCP Trigger: GGGGCAGTGACAACCTTTGCAGAACTCACAAGAGAT...ATACTTGGAGAGGTAGTGTTCCTTTAAGATGTAGCCCTGGCTGTCCTGGAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGAACACTACCTCTCCAAGTATCTATATGGAAATTCCTCATCCAAACATCAACAAGGCAATCTCTTGTaGGTTCTGCAAAGGTTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: KEHYLSKYLYGNSSSKHQQGNLL*VLQRLS Trigger: TGACAACCTTTGCAGAACTCACAAGAGATTGCCTTG...TTGATGTTTGGATGAGGAATTTCCATATAGATACTTGGAGAGGTAGTGTTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTAAAGGAACACTACCTCTCCAAGTATCTATATGGAAATTCCTCATCCAAACATTGAACACCCCAGCCTaGATAGTATATTTTCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LKGTLPLQVSIWKFLIQTLNTPA*IVYFLS Trigger: ACTGAGAAAATATACTATTCAGGCTGGGGTGTTCAA...TGTTTGGATGAGGAATTTCCATATAGATACTTGGAGAGGTAGTGTTCCTTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| 3UTR CCA 72 bp | CACATGCCTCCAGGTGGTCCTTTATACTCCCAGCCCTaGGCACACACACCACTCATTGAACACCCCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HMPPGGPLYSQP*AHTPLIEHPSL Trigger: CAGGCTGGGGTGTTCAATGAGTGGTGTGTGTGCCCAGGGCTGGGAGTATAAAGGACCACCTGGAGGCATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| 3UTR-3UTR CAA 90 bp | CACATGCCTCCAGGTGGTCCTTTATACTCCCAGCCCTGGGCACACACACCACTCAGAGGGTGTGTTCACTaGGTAAGCTCCCAAGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: HMPPGGPLYSQPWAHTPLRGCVH*VSSQGN Trigger: ATTGCCTTGGGAGCTTACCAAGTGAACACACCCTCT...GAGTGGTGTGTGTGCCCAGGGCTGGGAGTATAAAGGACCACCTGGAGGCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| 3UTR GCA 72 bp | AGACACAACCCCTCCCTTAAACCCAGCTCCATTCTGTaGTGTGTCTGGGTGGACACATCAAGGATAGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RHNPSLKPSSIL*CVWVDTSRIGP Trigger: GGGGCCTATCCTTGATGTGTCCACCCAGACACAGCACAGAATGGAGCTGGGTTTAAGGGAGGGGTTGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| 3UTR TCA 72 bp | TGTGTTCACTTGGTAAGCTCCCAAGGCAATCTCTTGTaGGTTCTGCAAAGGTTGTCACTGCCCCACCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: CVHLVSSQGNLL*VLQRLSLPHPI Trigger: GATGGGGTGGGGCAGTGACAACCTTTGCAGAACTCACAAGAGATTGCCTTGGGAGCTTACCAAGTGAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| 3UTR CCA 72 bp | CATCTTAAAGGAACACTACCTCTCCAAGTATCTATATaGAAATTCCTCATCCAAACATCAAGACACAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: HLKGTLPLQVSI*KFLIQTSRHNP Trigger: GGGGTTGTGTCTTGATGTTTGGATGAGGAATTTCCATATAGATACTTGGAGAGGTAGTGTTCCTTTAAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGCAAAGGTTGTCACTGCCCCACCCCATCACAGTAGGTCCATCCTGTCCCTCAGAGGCCGGTGCTaGAGCAGAGACGGGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSAKVVTAPPHHSRSILSLRGRC*SRDGTR Trigger: CCTGGTCCCGTCTCTGCTGCAGCACCGGCCTCTGAG...GGACAGGATGGACCTACTGTGATGGGGTGGGGCAGTGACAACCTTTGCAGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR TCA 90 bp | CACATGCCTCCAGGTGGTCCTTTATACTCCCAGCCCTGGGCACACACACCACTCTGGCCTGGACGAGGTTaGTGCCCTGGACGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HMPPGGPLYSQPWAHTPLWPGRG*CPGRSS Trigger: AGAACTACGTCCAGGGCATCAACCTCGTCCAGGCCA...GAGTGGTGTGTGTGCCCAGGGCTGGGAGTATAAAGGACCACCTGGAGGCATGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR GCA 90 bp | ACACACATGCCTCCAGGTGGTCCTTTATACTCCCAGCCCTGGGCACACACACCATCCTTCGGTGGCTGCTaGTTCTCAACTGCCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: THMPPGGPLYSQPWAHTPSFGGC*FSTAAL Trigger: CAGCGCGGCAGTTGAGAAGCAGCAGCCACCGAAGGA...TGGTGTGTGTGCCCAGGGCTGGGAGTATAAAGGACCACCTGGAGGCATGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGTTCAGGACACACACATGCCTCCAGGTGGTCCTTTATACTCCCAGCCCTCTCAACTGCCGCGCTaGACAGACGCTGGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKVQDTHMPPGGPLYSQPSQLPR*TDAGHL Trigger: CAGATGCCCAGCGTCTGTGCAGCGCGGCAGTTGAGA...GGGCTGGGAGTATAAAGGACCACCTGGAGGCATGTGTGTGTCCTGAACCTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR GCA 90 bp | CACATGCCTCCAGGTGGTCCTTTATACTCCCAGCCCTGGGCACACACACCACTCTTTGTCCACAGGCTTTaGCTCTGTCAGGCGGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: HMPPGGPLYSQPWAHTPLFVHRL*LCQADG Trigger: ACCGTCCGCCTGACAGAGGCAAAGCCTGTGGACAAA...GAGTGGTGTGTGTGCCCAGGGCTGGGAGTATAAAGGACCACCTGGAGGCATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGTTCAGGACACACACATGCCTCCAGGTGGTCCTTTATACTCCCAGCCCTGGCGACGTTGGCTTTaGTTTCCTGGGGCAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SKVQDTHMPPGGPLYSQPWRRWL*FPGAGT Trigger: AGTCCCTGCCCCAGGAAATCAAAGCCAACGTCGCCA...GGGCTGGGAGTATAAAGGACCACCTGGAGGCATGTGTGTGTCCTGAACCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR TCA 90 bp | ATATATGGCTGCAGGCCCCAAGCAAGGTTCAGGACACACACATGCCTCCAGGTGCCTCCAAGGCTGCTTTaGTCTTCTCGGCCTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IYGCRPQARFRTHTCLQVPPRLL*SSRPQL Trigger: AAGCTGAGGCCGAGAAGATCAAAGCAGCCTTGGAGG...CACCTGGAGGCATGTGTGTGTCCTGAACCTTGCTTGGGGCCTGCAGCCATATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR GCA 90 bp | ATATATGGCTGCAGGCCCCAAGCAAGGTTCAGGACACACACATGCCTCCAGGTGCACTGCCTCCAAGGCTaGTTTGATCTTCTCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IYGCRPQARFRTHTCLQVHCLQG*FDLLGL Trigger: GAGGCCGAGAAGATCAAAGCAGCCTTGGAGGCAGTG...CACCTGGAGGCATGTGTGTGTCCTGAACCTTGCTTGGGGCCTGCAGCCATATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTATACTCCCAGCCCTGGGCACACACACCACTCATTGAACACCCCAGCCTGTTGGCTTTGATTTCCTaGGGCAGGGACTCTACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLYSQPWAHTPLIEHPSLLALIS*GRDSTS Trigger: GCTGGTAGAGTCCCTGCCCCAGGAAATCAAAGCCAA...CAGGCTGGGGTGTTCAATGAGTGGTGTGTGTGCCCAGGGCTGGGAGTATAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGCAAAGGTTGTCACTGCCCCACCCCATCACAGTAGGTCCATCCTGTCCTCTTCAGGAGTTCGTTaGGGTCTGAGATCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSAKVVTAPPHHSRSILSSSGVR*GLRSPG Trigger: TCCTGGAGATCTCAGACCTCAACGAACTCCTGAAGA...GGACAGGATGGACCTACTGTGATGGGGTGGGGCAGTGACAACCTTTGCAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR GCA 90 bp | GGACAGCCAGGGCTACATCTTAAAGGAACACTACCTCTCCAAGTATCTATATGGCACTCCTTCGGTGGCTaGTGCTTCTCAACTGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: GQPGLHLKGTLPLQVSIWHSFGG*CFSTAA Trigger: CGCGGCAGTTGAGAAGCAGCAGCCACCGAAGGAGTG...CCATATAGATACTTGGAGAGGTAGTGTTCCTTTAAGATGTAGCCCTGGCTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTCCAGGACAGCCAGGGCTACATCTTAAAGGAACACTACCTCTCCAAGTATCTGTCAGGCGGACGGTaGAGTGTGTCCGCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KFQDSQGYILKEHYLSKYLSGGR*SVSALS Trigger: AGAAAGAGCGGACACACTTCACCGTCCGCCTGACAG...ATACTTGGAGAGGTAGTGTTCCTTTAAGATGTAGCCCTGGCTGTCCTGGAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR GCA 90 bp | GACAGCCAGGGCTACATCTTAAAGGAACACTACCTCTCCAAGTATCTATATGGAACGCTGGGCATCTGTTaGCTGGCAAGGCGAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSQGYILKEHYLSKYLYGTLGIC*LARRSA Trigger: AGCGCTTCGCCTTGCCAGGCAACAGATGCCCAGCGT...TCCATATAGATACTTGGAGAGGTAGTGTTCCTTTAAGATGTAGCCCTGGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR CCA 90 bp | CACATGCCTCCAGGTGGTCCTTTATACTCCCAGCCCTGGGCACACACACCACTCATAAGGCCGACATCCTaGATCTTCAATGTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HMPPGGPLYSQPWAHTPLIRPTS*IFNVFF Trigger: GAAGAAAACATTGAAGATCCAGGATGTCGGCCTTAT...GAGTGGTGTGTGTGCCCAGGGCTGGGAGTATAAAGGACCACCTGGAGGCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR CCA 90 bp | GACAGCCAGGGCTACATCTTAAAGGAACACTACCTCTCCAAGTATCTATATGGACACCATGCCACCCATTaGCATAAGGCCGACATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSQGYILKEHYLSKYLYGHHATH*HKADIL Trigger: CAGGATGTCGGCCTTATGCCAATGGGTGGCATGGTG...TCCATATAGATACTTGGAGAGGTAGTGTTCCTTTAAGATGTAGCCCTGGCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAGGAACACTACCTCTCCAAGTATCTATATGGAAATTCCTCATCCAAACACTGCTGCTTCTCAACTaGCGCGCTGCACAGACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGTLPLQVSIWKFLIQTLLLLN*RAAQTL Trigger: CAGCGTCTGTGCAGCGCGGCAGTTGAGAAGCAGCAG...TGTTTGGATGAGGAATTTCCATATAGATACTTGGAGAGGTAGTGTTCCTTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAACACTACCTCTCCAAGTATCTATATGGAAATTCCTCATCCAAACATCAAAGGCTGGCAATGTCTTaGACCAGCTGCTGGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KEHYLSKYLYGNSSSKHQRLAMS*TSCWIL Trigger: CAAGATCCAGCAGCTGGTCCAAGACATTGCCAGCCT...TTGATGTTTGGATGAGGAATTTCCATATAGATACTTGGAGAGGTAGTGTTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS GCA 90 bp | CGCTGCACAGACGCTGGGCATCTGTTGCCTGGCAAGGCGAAGCGCTaGCCCCCGGAGTCCAAGCCGTGGCCCCCACAGGCAGCGGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCTDAGHLLPGKAKR*PPESKPWPPQAAAS Trigger: GCTAGCCGCTGCCTGTGGGGGCCACGGCTTGGACTCCGGGGGGCAGCGCTTCGCCTTGCCAGGCAACAGATGCCCAGCGTCTGTGCAGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS GCA 90 bp | GCGCCGGCGAGTGCTTCACTCCTTCGGTGGCTGCTGCTTCTCAACTaGCGCGCTGCACAGACGCTGGGCATCTGTTGCCTGGCAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: APASASLLRWLLLLN*RAAQTLGICCLARR Trigger: TCGCCTTGCCAGGCAACAGATGCCCAGCGTCTGTGCAGCGCGGCAGTTGAGAAGCAGCAGCCACCGAAGGAGTGAAGCACTCGCCGGCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS GCA 90 bp | CATTATCCAGAGGTGCGCCGGCGAGTGCTTCACTCCTTCGGTGGCTaGTGCTTCTCAACTGCCGCGCTGCACAGACGCTGGGCATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HYPEVRRRVLHSFGG*CFSTAALHRRWASV Trigger: AACAGATGCCCAGCGTCTGTGCAGCGCGGCAGTTGAGAAGCAGCAGCCACCGAAGGAGTGAAGCACTCGCCGGCGCACCTCTGGATAATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR CAA 90 bp | CACATGCCTCCAGGTGGTCCTTTATACTCCCAGCCCTGGGCACACACACCACTCCTTTGTCCACAGGCTTaGCCTCTGTCAGGCGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: HMPPGGPLYSQPWAHTPLLCPQA*PLSGGR Trigger: CCGTCCGCCTGACAGAGGCAAAGCCTGTGGACAAAG...GAGTGGTGTGTGTGCCCAGGGCTGGGAGTATAAAGGACCACCTGGAGGCATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS CCA 90 bp | GGCCGGTGCTGCAGCAGAGACGGGACCAGGCACCATGCCACCCATTaGCATAAGGCCGACATCCTGGATCTTCAATGTTTTCTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRCCSRDGTRHHATH*HKADILDLQCFLQE Trigger: CTCCTGAAGAAAACATTGAAGATCCAGGATGTCGGCCTTATGCCAATGGGTGGCATGGTGCCTGGTCCCGTCTCTGCTGCAGCACCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCCAAGCAAGGTTCAGGACACACACATGCCTCCAGGTGGTCCTTTATACTCGTCCGCTCTTTCTGTTaGGGGACGTCTTCCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GPKQGSGHTHASRWSFILVRSFC*GTSSSS Trigger: CGAGGAGGAAGACGTCCCCAAACAGAAAGAGCGGAC...GAGTATAAAGGACCACCTGGAGGCATGTGTGTGTCCTGAACCTTGCTTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS TCA 90 bp | TCAGCTTTACTTTGTCCACAGGCTTTGCCTCTGTCAGGCGGACGGTaGAGTGTGTCCGCTCTTTCTGTTTGGGGACGTCTTCCTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SALLCPQALPLSGGR*SVSALSVWGRLPPR Trigger: CCGAGGAGGAAGACGTCCCCAAACAGAAAGAGCGGACACACTTCACCGTCCGCCTGACAGAGGCAAAGCCTGTGGACAAAGTAAAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS CCA 90 bp | TTGATCTTCTCGGCCTCAGCTTTGGCGACGTTGGCTTTGATTTCCTaGGGCAGGGACTCTACCAGCTTCTTGGCCTGGACGAGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LIFSASALATLALIS*GRDSTSFLAWTRLM Trigger: CATCAACCTCGTCCAGGCCAAGAAGCTGGTAGAGTCCCTGCCCCAGGAAATCAAAGCCAACGTCGCCAAAGCTGAGGCCGAGAAGATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR CAA 90 bp | AGACGTGATATATGGCTGCAGGCCCCAAGCAAGGTTCAGGACACACACATGCCTTTGGCGACGTTGGCTTaGATTTCCTGGGGCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RRDIWLQAPSKVQDTHMPLATLA*ISWGRD Trigger: GTCCCTGCCCCAGGAAATCAAAGCCAACGTCGCCAA...AGGCATGTGTGTGTCCTGAACCTTGCTTGGGGCCTGCAGCCATATATCACGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR CAA 90 bp | ATATATGGCTGCAGGCCCCAAGCAAGGTTCAGGACACACACATGCCTCCAGGTGTCAGCTTTGGCGACGTaGGCTTTGATTTCCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IYGCRPQARFRTHTCLQVSALAT*ALISWG Trigger: GCCCCAGGAAATCAAAGCCAACGTCGCCAAAGCTGA...CACCTGGAGGCATGTGTGTGTCCTGAACCTTGCTTGGGGCCTGCAGCCATATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR CAA 90 bp | AGACGTGATATATGGCTGCAGGCCCCAAGCAAGGTTCAGGACACACACATGCCTTTCTCGGCCTCAGCTTaGGCGACGTTGGCTTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: RRDIWLQAPSKVQDTHMPFSASA*ATLALI Trigger: AATCAAAGCCAACGTCGCCAAAGCTGAGGCCGAGAA...AGGCATGTGTGTGTCCTGAACCTTGCTTGGGGCCTGCAGCCATATATCACGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS CCA 90 bp | ACGGGACCAGGCACCATGCCACCCATTGGCATAAGGCCGACATCCTaGATCTTCAATGTTTTCTTCAGGAGTTCGTTGAGGTCTGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: TGPGTMPPIGIRPTS*IFNVFFRSSLRSEI Trigger: GATCTCAGACCTCAACGAACTCCTGAAGAAAACATTGAAGATCCAGGATGTCGGCCTTATGCCAATGGGTGGCATGGTGCCTGGTCCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS GCA 90 bp | GTAGTTCTTGATCTCCTTGATCAGCTTTACTTTGTCCACAGGCTTTaGCTCTGTCAGGCGGACGGTGAAGTGTGTCCGCTCTTTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VVLDLLDQLYFVHRL*LCQADGEVCPLFLF Trigger: AAACAGAAAGAGCGGACACACTTCACCGTCCGCCTGACAGAGGCAAAGCCTGTGGACAAAGTAAAGCTGATCAAGGAGATCAAGAACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR CAA 90 bp | GGACAGCCAGGGCTACATCTTAAAGGAACACTACCTCTCCAAGTATCTATATGGAAGGCTGGCAATGTCTaGGACCAGCTGCTGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GQPGLHLKGTLPLQVSIWKAGNV*DQLLDL Trigger: AAGATCCAGCAGCTGGTCCAAGACATTGCCAGCCTT...CCATATAGATACTTGGAGAGGTAGTGTTCCTTTAAGATGTAGCCCTGGCTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR CAA 90 bp | TATATGTTGGGCAGTGTTGATACACAGCAGGTAGAAGCAGGTGGATTTGAGTTCTTCTTCAGGAGTTCGTaGAGGTCTGAGATCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YMLGSVDTQQVEAGGFEFFFRSS*RSEISR Trigger: CCTGGAGATCTCAGACCTCAACGAACTCCTGAAGAA...GAACTCAAATCCACCTGCTTCTACCTGCTGTGTATCAACACTGCCCAACATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS-3UTR CAA 90 bp | GGCTACATCTTAAAGGAACACTACCTCTCCAAGTATCTATATGGAAATTCCTCATTGATCAGCTTTACTTaGTCCACAGGCTTTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GYILKEHYLSKYLYGNSSLISFT*STGFAS Trigger: AGAGGCAAAGCCTGTGGACAAAGTAAAGCTGATCAA...TGAGGAATTTCCATATAGATACTTGGAGAGGTAGTGTTCCTTTAAGATGTAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS GCA 72 bp | GACGCTGGGCATCTGTTGCCTGGCAAGGCGAAGCGCTaGCCCCCGGAGTCCAAGCCGTGGCCCCCACAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: DAGHLLPGKAKR*PPESKPWPPQA Trigger: TGCCTGTGGGGGCCACGGCTTGGACTCCGGGGGGCAGCGCTTCGCCTTGCCAGGCAACAGATGCCCAGCGTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS GCA 72 bp | GAGGTGCGCCGGCGAGTGCTTCACTCCTTCGGTGGCTaGTGCTTCTCAACTGCCGCGCTGCACAGACGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EVRRRVLHSFGG*CFSTAALHRRW Trigger: CCAGCGTCTGTGCAGCGCGGCAGTTGAGAAGCAGCAGCCACCGAAGGAGTGAAGCACTCGCCGGCGCACCTC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS GCA 72 bp | ACTCCTTCGGTGGCTGCTGCTTCTCAACTGCCGCGCTaGACAGACGCTGGGCATCTGTTGCCTGGCAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TPSVAAASQLPR*TDAGHLLPGKA Trigger: CGCCTTGCCAGGCAACAGATGCCCAGCGTCTGTGCAGCGCGGCAGTTGAGAAGCAGCAGCCACCGAAGGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS CAA 72 bp | GTCAGGCGGACGGTGAAGTGTGTCCGCTCTTTCTGTTaGGGGACGTCTTCCTCCTCGGCCGCCTCAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRRTVKCVRSFC*GTSSSSAASEA Trigger: GGCCTCTGAGGCGGCCGAGGAGGAAGACGTCCCCAAACAGAAAGAGCGGACACACTTCACCGTCCGCCTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS CAA 90 bp | TTTGCCTCTGTCAGGCGGACGGTGAAGTGTGTCCGCTCTTTCTGTTaGGGGACGTCTTCCTCCTCGGCCGCCTCAGAGGCCGGTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FASVRRTVKCVRSFC*GTSSSSAASEAGAA Trigger: TGCAGCACCGGCCTCTGAGGCGGCCGAGGAGGAAGACGTCCCCAAACAGAAAGAGCGGACACACTTCACCGTCCGCCTGACAGAGGCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS GCA 72 bp | AGTGCTTCACTCCTTCGGTGGCTGCTGCTTCTCAACTaGCGCGCTGCACAGACGCTGGGCATCTGTTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SASLLRWLLLLN*RAAQTLGICCL Trigger: CAGGCAACAGATGCCCAGCGTCTGTGCAGCGCGGCAGTTGAGAAGCAGCAGCCACCGAAGGAGTGAAGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS TCA 72 bp | GAACCACGGTGCCACCCACTGCCTCCAAGGCTGCTTTaGTCTTCTCGGCCTCAGCTTTGGCGACGTTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EPRCHPLPPRLL*SSRPQLWRRWL Trigger: AAGCCAACGTCGCCAAAGCTGAGGCCGAGAAGATCAAAGCAGCCTTGGAGGCAGTGGGTGGCACCGTGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS GCA 72 bp | CTCCAGAACCACGGTGCCACCCACTGCCTCCAAGGCTaGTTTGATCTTCTCGGCCTCAGCTTTGGCGACGTT | + |
|
Preference number: 6 (lower is better) Translates to: LQNHGATHCLQG*FDLLGLSFGDV Trigger: AACGTCGCCAAAGCTGAGGCCGAGAAGATCAAAGCAGCCTTGGAGGCAGTGGGTGGCACCGTGGTTCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS CCA 72 bp | TCGGCCTCAGCTTTGGCGACGTTGGCTTTGATTTCCTaGGGCAGGGACTCTACCAGCTTCTTGGCCTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: SASALATLALIS*GRDSTSFLAWT Trigger: CGTCCAGGCCAAGAAGCTGGTAGAGTCCCTGCCCCAGGAAATCAAAGCCAACGTCGCCAAAGCTGAGGCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS CAA 90 bp | CCACCCACTGCCTCCAAGGCTGCTTTGATCTTCTCGGCCTCAGCTTaGGCGACGTTGGCTTTGATTTCCTGGGGCAGGGACTCTACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PPTASKAALIFSASA*ATLALISWGRDSTS Trigger: GCTGGTAGAGTCCCTGCCCCAGGAAATCAAAGCCAACGTCGCCAAAGCTGAGGCCGAGAAGATCAAAGCAGCCTTGGAGGCAGTGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS CAA 72 bp | GCCTCCAAGGCTGCTTTGATCTTCTCGGCCTCAGCTTaGGCGACGTTGGCTTTGATTTCCTGGGGCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ASKAALIFSASA*ATLALISWGRD Trigger: GTCCCTGCCCCAGGAAATCAAAGCCAACGTCGCCAAAGCTGAGGCCGAGAAGATCAAAGCAGCCTTGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS GCA 72 bp | TTCTTTGGGAGCATTATCCAGAGGTGCGCCGGCGAGTaGTTCACTCCTTCGGTGGCTGCTGCTTCTCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: FFGSIIQRCAGE*FTPSVAAASQL Trigger: CAGTTGAGAAGCAGCAGCCACCGAAGGAGTGAAGCACTCGCCGGCGCACCTCTGGATAATGCTCCCAAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS GCA 72 bp | GATCTCCTTGATCAGCTTTACTTTGTCCACAGGCTTTaGCTCTGTCAGGCGGACGGTGAAGTGTGTCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DLLDQLYFVHRL*LCQADGEVCPL Trigger: GAGCGGACACACTTCACCGTCCGCCTGACAGAGGCAAAGCCTGTGGACAAAGTAAAGCTGATCAAGGAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS CCA 72 bp | TGCAGCAGAGACGGGACCAGGCACCATGCCACCCATTaGCATAAGGCCGACATCCTGGATCTTCAATGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CSRDGTRHHATH*HKADILDLQCF Trigger: AAAACATTGAAGATCCAGGATGTCGGCCTTATGCCAATGGGTGGCATGGTGCCTGGTCCCGTCTCTGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS CAA 72 bp | TTGATCTTCTCGGCCTCAGCTTTGGCGACGTTGGCTTaGATTTCCTGGGGCAGGGACTCTACCAGCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LIFSASALATLA*ISWGRDSTSFL Trigger: CAAGAAGCTGGTAGAGTCCCTGCCCCAGGAAATCAAAGCCAACGTCGCCAAAGCTGAGGCCGAGAAGATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS CCA 72 bp | GGCACCATGCCACCCATTGGCATAAGGCCGACATCCTaGATCTTCAATGTTTTCTTCAGGAGTTCGTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTMPPIGIRPTS*IFNVFFRSSLR Trigger: CCTCAACGAACTCCTGAAGAAAACATTGAAGATCCAGGATGTCGGCCTTATGCCAATGGGTGGCATGGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||
| CDS TCA 72 bp | GATCTTCAATGTTTTCTTCAGGAGTTCGTTGAGGTCTaGGATCTCCAGGAGCGTAAGGCTGGCAATGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DLQCFLQEFVEV*DLQERKAGNVL Trigger: CAAGACATTGCCAGCCTTACGCTCCTGGAGATCTCAGACCTCAACGAACTCCTGAAGAAAACATTGAAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043627.8 |
||